BLASTX nr result

ID: Rauwolfia21_contig00028671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00028671
         (686 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69847.1| hypothetical protein VITISV_038350 [Vitis vinifera]    45   3e-08
ref|XP_006472112.1| PREDICTED: F-box/kelch-repeat protein At1g57...    39   3e-06
ref|XP_006433260.1| hypothetical protein CICLE_v10003369mg, part...    39   1e-05

>emb|CAN69847.1| hypothetical protein VITISV_038350 [Vitis vinifera]
          Length = 404

 Score = 45.4 bits (106), Expect(2) = 3e-08
 Identities = 41/144 (28%), Positives = 59/144 (40%), Gaps = 7/144 (4%)
 Frame = +1

Query: 229 RPINRLPWLVTFD----NSESDGLVCKLFDPMHEKPSEIYPIN-GPVIG--TFFPDYVVS 387
           + I++LPW + +      S S   VCKL++P+H      Y +  G + G   F    V +
Sbjct: 67  KAIDKLPWTMEYKWRNPKSISFWSVCKLYEPLHHNRRLSYMVEKGRMRGRKNFAKGEVRA 126

Query: 388 *HGSLLFLRESDRYTAELFLFCPYTKEVIVLFDFSHGFKETANYCSCSYDEDGNCVCFSK 567
              S +   + D +  + F F P+TKEVI L                         CF  
Sbjct: 127 SRYSWVLFYKDDYWQGKFFFFNPFTKEVIFL------------------------PCFES 162

Query: 568 DRRRIATFSSSDPKSP*CILFVVY 639
                ATFS + P SP C +FV Y
Sbjct: 163 PVSEFATFSLA-PTSPHCFVFVPY 185



 Score = 38.9 bits (89), Expect(2) = 3e-08
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = +2

Query: 110 PWSNLPTHIWELIMESLSLADQIRLRFVCKSFPSYP 217
           PWS+LP  +   IME L +AD++RLR VCK +   P
Sbjct: 27  PWSDLPQDLIVSIMERLYVADRVRLRGVCKDWHLQP 62


>ref|XP_006472112.1| PREDICTED: F-box/kelch-repeat protein At1g57790-like [Citrus
           sinensis]
          Length = 337

 Score = 38.9 bits (89), Expect(2) = 3e-06
 Identities = 23/63 (36%), Positives = 32/63 (50%)
 Frame = +2

Query: 17  LPEVRHDQRVRIKVSSLLNNKSNFPQRSSCEPWSNLPTHIWELIMESLSLADQIRLRFVC 196
           +P  R  +  R+K   +        Q  S   WS+LP +I  LIM  L  ADQIR + VC
Sbjct: 1   MPRKRGMRGARVKAKKIKR------QSYSHSSWSDLPENIIRLIMNRLCYADQIRFQAVC 54

Query: 197 KSF 205
           K++
Sbjct: 55  KNW 57



 Score = 38.5 bits (88), Expect(2) = 3e-06
 Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
 Frame = +1

Query: 229 RPINRLPWLVTFDNSESDGLVCKLFDPMHEKPSEIYPINGPVIGTFFPDYVV-S*HGSLL 405
           R  ++LPW++ F NS S    C L+DP  ++    Y I+ P    F+  +V+ S +G +L
Sbjct: 66  RCADKLPWILAF-NSYS----CFLYDPSDKQS---YSISNPSFRRFYGSHVLESKYGWVL 117

Query: 406 F----LRESDRYTAEL-------FLFCPYTKEVIVLFDFSHGFKETANYCSCSYDEDGNC 552
           F    +  S RY  EL       F +C +T E+I              Y     D D   
Sbjct: 118 FQGPTVMVSSRYRPELTRTSISLFFYCLFTDEII-----------RTPYLEIMSDIDPFT 166

Query: 553 VCFSKDRRRIATFSSSDPKSP*CILFVVYYIYDN 654
           +        IA+  S++P S  C++ VV  + D+
Sbjct: 167 L-------TIASTFSTNPVSSDCVILVVRILIDD 193


>ref|XP_006433260.1| hypothetical protein CICLE_v10003369mg, partial [Citrus clementina]
           gi|557535382|gb|ESR46500.1| hypothetical protein
           CICLE_v10003369mg, partial [Citrus clementina]
          Length = 306

 Score = 38.9 bits (89), Expect(2) = 1e-05
 Identities = 23/63 (36%), Positives = 32/63 (50%)
 Frame = +2

Query: 17  LPEVRHDQRVRIKVSSLLNNKSNFPQRSSCEPWSNLPTHIWELIMESLSLADQIRLRFVC 196
           +P  R  +  R+K   +        Q  S   WS+LP +I  LIM  L  ADQIR + VC
Sbjct: 1   MPRKRGMRGARVKAKKIKR------QSYSHSSWSDLPENIIRLIMNRLCYADQIRFQAVC 54

Query: 197 KSF 205
           K++
Sbjct: 55  KNW 57



 Score = 37.0 bits (84), Expect(2) = 1e-05
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 12/94 (12%)
 Frame = +1

Query: 229 RPINRLPWLVTFDNSESDGLVCKLFDPMHEKPSEIYPINGPVIGTFFPDYVV-S*HGSLL 405
           R  ++LPW++ F NS S    C L+DP  ++    Y I+ P    F+  +V+ S +G +L
Sbjct: 66  RCADKLPWILAF-NSYS----CFLYDPSDKQS---YSISNPSFRRFYGSHVLESKYGWVL 117

Query: 406 F----LRESDRYTAEL-------FLFCPYTKEVI 474
           F    +  S RY  EL       F +C +T E+I
Sbjct: 118 FQGPTVMVSSRYRPELTRTSISLFFYCLFTDEII 151


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