BLASTX nr result
ID: Rauwolfia21_contig00028557
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00028557
(202 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 130 2e-28
emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera] 121 8e-26
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 119 4e-25
emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera] 116 3e-24
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum] 115 8e-24
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 114 1e-23
ref|XP_003634235.1| PREDICTED: uncharacterized protein LOC100248... 114 2e-23
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera] 113 3e-23
emb|CAN67644.1| hypothetical protein VITISV_028829 [Vitis vinifera] 112 5e-23
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 108 6e-22
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 108 7e-22
emb|CAN77763.1| hypothetical protein VITISV_026761 [Vitis vinifera] 107 1e-21
gb|AAK29467.1| polyprotein-like [Solanum chilense] 107 2e-21
emb|CAN77982.1| hypothetical protein VITISV_043417 [Vitis vinifera] 104 1e-20
gb|AAT90460.1| reverse transcriptase [Vigna radiata] 104 1e-20
ref|XP_004229099.1| PREDICTED: uncharacterized protein LOC101259... 103 2e-20
emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera] 103 2e-20
emb|CAN72446.1| hypothetical protein VITISV_008625 [Vitis vinifera] 103 2e-20
emb|CAN60796.1| hypothetical protein VITISV_015834 [Vitis vinifera] 103 2e-20
emb|CAN81130.1| hypothetical protein VITISV_003944 [Vitis vinifera] 103 2e-20
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 130 bits (327), Expect = 2e-28
Identities = 63/67 (94%), Positives = 65/67 (97%), Gaps = 1/67 (1%)
Frame = +3
Query: 3 GLAASLNLEVEQMDVKTVFLHGDLEE-IYMEQPEGFQQKGKEDYVCKLRKSLYGLKQAPR 179
GLAASLNLEVEQMDVKT FLHGDLEE IYMEQP+GFQQKGKEDYVC+LRKSLYGLKQAPR
Sbjct: 910 GLAASLNLEVEQMDVKTAFLHGDLEEEIYMEQPDGFQQKGKEDYVCRLRKSLYGLKQAPR 969
Query: 180 QWYKKFE 200
QWYKKFE
Sbjct: 970 QWYKKFE 976
>emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
Length = 1317
Score = 121 bits (304), Expect = 8e-26
Identities = 58/67 (86%), Positives = 63/67 (94%), Gaps = 1/67 (1%)
Frame = +3
Query: 3 GLAASLNLEVEQMDVKTVFLHGDLE-EIYMEQPEGFQQKGKEDYVCKLRKSLYGLKQAPR 179
GLAASL+LE++QMDVKT FLHGDL+ EIYMEQPEGF KGKEDYVCKL+KSLYGLKQAPR
Sbjct: 876 GLAASLDLEIQQMDVKTAFLHGDLDKEIYMEQPEGFVLKGKEDYVCKLKKSLYGLKQAPR 935
Query: 180 QWYKKFE 200
QWYKKFE
Sbjct: 936 QWYKKFE 942
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 119 bits (298), Expect = 4e-25
Identities = 56/66 (84%), Positives = 62/66 (93%), Gaps = 1/66 (1%)
Frame = +3
Query: 3 GLAASLNLEVEQMDVKTVFLHGDL-EEIYMEQPEGFQQKGKEDYVCKLRKSLYGLKQAPR 179
GLAA L++E+EQMDVKT FLHGDL EEIYMEQPEGF+ KGKEDYVC+L+KSLYGLKQAPR
Sbjct: 907 GLAARLDIEIEQMDVKTAFLHGDLDEEIYMEQPEGFKVKGKEDYVCRLKKSLYGLKQAPR 966
Query: 180 QWYKKF 197
QWYKKF
Sbjct: 967 QWYKKF 972
>emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera]
Length = 809
Score = 116 bits (291), Expect = 3e-24
Identities = 57/67 (85%), Positives = 61/67 (91%), Gaps = 1/67 (1%)
Frame = +3
Query: 3 GLAASLNLEVEQMDVKTVFLHGDLE-EIYMEQPEGFQQKGKEDYVCKLRKSLYGLKQAPR 179
GLAASL+LE+EQMDVKT FLHGDL+ EIYMEQ EGF KGKEDY CKL+KSLYGLKQAPR
Sbjct: 388 GLAASLDLEIEQMDVKTTFLHGDLDKEIYMEQLEGFIIKGKEDYACKLKKSLYGLKQAPR 447
Query: 180 QWYKKFE 200
QWYKKFE
Sbjct: 448 QWYKKFE 454
>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
Length = 687
Score = 115 bits (287), Expect = 8e-24
Identities = 54/67 (80%), Positives = 61/67 (91%), Gaps = 1/67 (1%)
Frame = +3
Query: 3 GLAASLNLEVEQMDVKTVFLHGDL-EEIYMEQPEGFQQKGKEDYVCKLRKSLYGLKQAPR 179
GLA LNLE+EQ+DVKT FLHGDL EEIYMEQPEGF+ KGKE++VCKL+KSLYGLKQAPR
Sbjct: 269 GLATCLNLELEQLDVKTAFLHGDLHEEIYMEQPEGFEVKGKENFVCKLKKSLYGLKQAPR 328
Query: 180 QWYKKFE 200
QWY KF+
Sbjct: 329 QWYHKFD 335
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 114 bits (286), Expect = 1e-23
Identities = 55/66 (83%), Positives = 62/66 (93%), Gaps = 1/66 (1%)
Frame = +3
Query: 6 LAASLNLEVEQMDVKTVFLHGDLEE-IYMEQPEGFQQKGKEDYVCKLRKSLYGLKQAPRQ 182
LAA+L+LEVEQMDVKT FLHGDLEE IYM+QP+GF +GKED+VC+LRKSLYGLKQAPRQ
Sbjct: 854 LAATLDLEVEQMDVKTAFLHGDLEEEIYMKQPDGFLVEGKEDHVCRLRKSLYGLKQAPRQ 913
Query: 183 WYKKFE 200
WYKKFE
Sbjct: 914 WYKKFE 919
>ref|XP_003634235.1| PREDICTED: uncharacterized protein LOC100248387 [Vitis vinifera]
Length = 952
Score = 114 bits (284), Expect = 2e-23
Identities = 56/67 (83%), Positives = 61/67 (91%), Gaps = 1/67 (1%)
Frame = +3
Query: 3 GLAASLNLEVEQMDVKTVFLHGDLE-EIYMEQPEGFQQKGKEDYVCKLRKSLYGLKQAPR 179
GLAASL+LE++QMDVKT FLHGDL+ EIYMEQ EGF KGKEDYVCKL+KSLYGLKQA R
Sbjct: 92 GLAASLDLEIQQMDVKTAFLHGDLDKEIYMEQLEGFVLKGKEDYVCKLKKSLYGLKQALR 151
Query: 180 QWYKKFE 200
QWYKKFE
Sbjct: 152 QWYKKFE 158
>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 113 bits (282), Expect = 3e-23
Identities = 53/63 (84%), Positives = 58/63 (92%), Gaps = 1/63 (1%)
Frame = +3
Query: 15 SLNLEVEQMDVKTVFLHGDLE-EIYMEQPEGFQQKGKEDYVCKLRKSLYGLKQAPRQWYK 191
S +LE++QMDVKT FLHGDL+ EIYMEQPEGF KGKEDYVCKL+KSLYGLKQAPRQWYK
Sbjct: 884 SFDLEIQQMDVKTAFLHGDLDKEIYMEQPEGFVLKGKEDYVCKLKKSLYGLKQAPRQWYK 943
Query: 192 KFE 200
KFE
Sbjct: 944 KFE 946
>emb|CAN67644.1| hypothetical protein VITISV_028829 [Vitis vinifera]
Length = 831
Score = 112 bits (280), Expect = 5e-23
Identities = 53/67 (79%), Positives = 61/67 (91%), Gaps = 1/67 (1%)
Frame = +3
Query: 3 GLAASLNLEVEQMDVKTVFLHGDLEE-IYMEQPEGFQQKGKEDYVCKLRKSLYGLKQAPR 179
GLAAS+NLE+EQ+DVKTVF HGDLEE IYME+P+GF KGKE VC+L+KSLYGLKQAPR
Sbjct: 478 GLAASMNLEIEQLDVKTVFFHGDLEEEIYMERPKGFTIKGKEALVCRLKKSLYGLKQAPR 537
Query: 180 QWYKKFE 200
QWYKKF+
Sbjct: 538 QWYKKFD 544
>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 108 bits (271), Expect = 6e-22
Identities = 52/62 (83%), Positives = 58/62 (93%), Gaps = 1/62 (1%)
Frame = +3
Query: 3 GLAASLNLEVEQMDVKTVFLHGDLE-EIYMEQPEGFQQKGKEDYVCKLRKSLYGLKQAPR 179
GLAASL+LE++QMDVKT FLHG+L+ EIYMEQPEGF KGKEDYVCKL+KSLYGLKQAPR
Sbjct: 808 GLAASLDLEIQQMDVKTAFLHGNLDKEIYMEQPEGFVLKGKEDYVCKLKKSLYGLKQAPR 867
Query: 180 QW 185
QW
Sbjct: 868 QW 869
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 108 bits (270), Expect = 7e-22
Identities = 53/66 (80%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 6 LAASLNLEVEQMDVKTVFLHGDLEE-IYMEQPEGFQQKGKEDYVCKLRKSLYGLKQAPRQ 182
LAASL+LEVEQ+DVKT FLHGDLEE IYMEQPEGF+ GK+ VCKL KSLYGLKQAPRQ
Sbjct: 910 LAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQ 969
Query: 183 WYKKFE 200
WY KF+
Sbjct: 970 WYMKFD 975
>emb|CAN77763.1| hypothetical protein VITISV_026761 [Vitis vinifera]
Length = 369
Score = 107 bits (268), Expect = 1e-21
Identities = 51/67 (76%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
Frame = +3
Query: 3 GLAASLNLEVEQMDVKTVFLHGDLE-EIYMEQPEGFQQKGKEDYVCKLRKSLYGLKQAPR 179
GLA S+NLE+EQ+DVKT+FLHGDLE EIYMEQPEGF K KE VC+L+KSLYGLKQ R
Sbjct: 80 GLATSMNLEIEQLDVKTIFLHGDLEKEIYMEQPEGFTIKSKEHLVCRLKKSLYGLKQTLR 139
Query: 180 QWYKKFE 200
QWYKKF+
Sbjct: 140 QWYKKFD 146
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 107 bits (266), Expect = 2e-21
Identities = 52/66 (78%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +3
Query: 6 LAASLNLEVEQMDVKTVFLHGDLEE-IYMEQPEGFQQKGKEDYVCKLRKSLYGLKQAPRQ 182
+AASL+LEVEQ+DVKT FLHGDLEE IYMEQ EGF+ GK+ VCKL KSLYGLKQAPRQ
Sbjct: 911 IAASLDLEVEQLDVKTAFLHGDLEEEIYMEQGEGFEVSGKKHMVCKLNKSLYGLKQAPRQ 970
Query: 183 WYKKFE 200
WYKKF+
Sbjct: 971 WYKKFD 976
>emb|CAN77982.1| hypothetical protein VITISV_043417 [Vitis vinifera]
Length = 440
Score = 104 bits (260), Expect = 1e-20
Identities = 51/67 (76%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
Frame = +3
Query: 3 GLAASLNLEVEQMDVKTVFLHGDLEE-IYMEQPEGFQQKGKEDYVCKLRKSLYGLKQAPR 179
GLAAS+NLE+EQ+DVKT FLHG LEE IY+EQ EGF KGKE VC+L+KSLYGL QAPR
Sbjct: 76 GLAASINLEIEQLDVKTTFLHGHLEEEIYIEQLEGFTIKGKEHLVCRLKKSLYGLIQAPR 135
Query: 180 QWYKKFE 200
QWYKKF+
Sbjct: 136 QWYKKFD 142
>gb|AAT90460.1| reverse transcriptase [Vigna radiata]
Length = 93
Score = 104 bits (259), Expect = 1e-20
Identities = 49/56 (87%), Positives = 52/56 (92%), Gaps = 1/56 (1%)
Frame = +3
Query: 36 QMDVKTVFLHGDLEE-IYMEQPEGFQQKGKEDYVCKLRKSLYGLKQAPRQWYKKFE 200
QMDVKT FLHGDLEE IYM+QP+GF KGKEDYVC+LRKSLYGLKQAPRQWYKKFE
Sbjct: 1 QMDVKTTFLHGDLEEEIYMKQPDGFLVKGKEDYVCRLRKSLYGLKQAPRQWYKKFE 56
>ref|XP_004229099.1| PREDICTED: uncharacterized protein LOC101259364 [Solanum
lycopersicum]
Length = 505
Score = 103 bits (258), Expect = 2e-20
Identities = 47/66 (71%), Positives = 59/66 (89%), Gaps = 1/66 (1%)
Frame = +3
Query: 6 LAASLNLEVEQMDVKTVFLHGDLEE-IYMEQPEGFQQKGKEDYVCKLRKSLYGLKQAPRQ 182
+AA N+E+EQ+DVKT FLHG+LEE IYM QP+GFQ GKE++VCKL+KSLYGLKQ+PRQ
Sbjct: 216 IAAKRNVELEQLDVKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQ 275
Query: 183 WYKKFE 200
WYK+F+
Sbjct: 276 WYKRFD 281
>emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera]
Length = 1211
Score = 103 bits (258), Expect = 2e-20
Identities = 49/67 (73%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
Frame = +3
Query: 3 GLAASLNLEVEQMDVKTVFLHGDLEE-IYMEQPEGFQQKGKEDYVCKLRKSLYGLKQAPR 179
G+ A+ NL +EQ+DVKT FLHGDLEE +YM QPEGF +G+E+ VCKLRKSLYGLKQAPR
Sbjct: 794 GMVAAKNLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPR 853
Query: 180 QWYKKFE 200
QWYKKF+
Sbjct: 854 QWYKKFD 860
>emb|CAN72446.1| hypothetical protein VITISV_008625 [Vitis vinifera]
Length = 87
Score = 103 bits (258), Expect = 2e-20
Identities = 49/55 (89%), Positives = 51/55 (92%), Gaps = 1/55 (1%)
Frame = +3
Query: 39 MDVKTVFLHGDLE-EIYMEQPEGFQQKGKEDYVCKLRKSLYGLKQAPRQWYKKFE 200
MDVKT FLHGDL+ EIYMEQPEGF KGKEDYVCKL+KSLYGLKQAPRQWYKKFE
Sbjct: 1 MDVKTAFLHGDLDKEIYMEQPEGFVLKGKEDYVCKLKKSLYGLKQAPRQWYKKFE 55
>emb|CAN60796.1| hypothetical protein VITISV_015834 [Vitis vinifera]
Length = 1186
Score = 103 bits (258), Expect = 2e-20
Identities = 49/67 (73%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
Frame = +3
Query: 3 GLAASLNLEVEQMDVKTVFLHGDLEE-IYMEQPEGFQQKGKEDYVCKLRKSLYGLKQAPR 179
G+ A+ NL +EQ+DVKT FLHGDLEE +YM QPEGF +G+E+ VCKLRKSLYGLKQAPR
Sbjct: 561 GMVAAKNLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPR 620
Query: 180 QWYKKFE 200
QWYKKF+
Sbjct: 621 QWYKKFD 627
>emb|CAN81130.1| hypothetical protein VITISV_003944 [Vitis vinifera]
Length = 1236
Score = 103 bits (257), Expect = 2e-20
Identities = 49/67 (73%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
Frame = +3
Query: 3 GLAASLNLEVEQMDVKTVFLHGDLEE-IYMEQPEGFQQKGKEDYVCKLRKSLYGLKQAPR 179
G+ A+ NL +EQ+DVKT FLHGDLEE +YM QPEGF +G+E+ VCKLRKSLYGLKQAPR
Sbjct: 857 GMVAAENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPR 916
Query: 180 QWYKKFE 200
QWYKKF+
Sbjct: 917 QWYKKFD 923