BLASTX nr result

ID: Rauwolfia21_contig00028530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00028530
         (355 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25128.3| unnamed protein product [Vitis vinifera]               57   3e-06
ref|XP_002276156.1| PREDICTED: F-box protein SKIP22 [Vitis vinif...    57   3e-06

>emb|CBI25128.3| unnamed protein product [Vitis vinifera]
          Length = 508

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 43/93 (46%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
 Frame = -2

Query: 258 KVFTEELGGSDDGDLNHKQLVTAVHAVLLELCFVGFDMNSKTEIRRVQFQAD*PF---SL 88
           KV  EE+G  DDG+  HK LV AVHAV+LE  FVGFD  S   + R     + PF   S+
Sbjct: 176 KVLREEVG--DDGN-EHKLLVIAVHAVMLESGFVGFDSVSGMRVDRFHLSEEYPFAAISM 232

Query: 87  SLFYTLPGIVGPILASSECDN----RVVILKFQ 1
           SL+YTLP      L    CD+    + V LKFQ
Sbjct: 233 SLWYTLPE-----LLDHGCDDSPAIQSVALKFQ 260


>ref|XP_002276156.1| PREDICTED: F-box protein SKIP22 [Vitis vinifera]
           gi|147804806|emb|CAN73524.1| hypothetical protein
           VITISV_010705 [Vitis vinifera]
          Length = 563

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 43/93 (46%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
 Frame = -2

Query: 258 KVFTEELGGSDDGDLNHKQLVTAVHAVLLELCFVGFDMNSKTEIRRVQFQAD*PF---SL 88
           KV  EE+G  DDG+  HK LV AVHAV+LE  FVGFD  S   + R     + PF   S+
Sbjct: 238 KVLREEVG--DDGN-EHKLLVIAVHAVMLESGFVGFDSVSGMRVDRFHLSEEYPFAAISM 294

Query: 87  SLFYTLPGIVGPILASSECDN----RVVILKFQ 1
           SL+YTLP      L    CD+    + V LKFQ
Sbjct: 295 SLWYTLPE-----LLDHGCDDSPAIQSVALKFQ 322


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