BLASTX nr result
ID: Rauwolfia21_contig00028339
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00028339
(407 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004295833.1| PREDICTED: DNA mismatch repair protein MSH5-... 125 6e-27
ref|XP_003617575.1| DNA mismatch repair protein mutS [Medicago t... 125 6e-27
ref|XP_006475043.1| PREDICTED: DNA mismatch repair protein MSH5-... 125 8e-27
ref|XP_006452401.1| hypothetical protein CICLE_v10010304mg [Citr... 125 8e-27
gb|EMJ15717.1| hypothetical protein PRUPE_ppa015717mg [Prunus pe... 124 1e-26
ref|XP_004149586.1| PREDICTED: DNA mismatch repair protein MSH5-... 122 4e-26
emb|CBI26657.3| unnamed protein product [Vitis vinifera] 122 4e-26
ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Viti... 122 4e-26
ref|XP_004491410.1| PREDICTED: DNA mismatch repair protein MSH5-... 121 8e-26
gb|EOY12305.1| MUTS [Theobroma cacao] 120 2e-25
ref|XP_006338892.1| PREDICTED: DNA mismatch repair protein MSH5-... 120 2e-25
ref|XP_002317341.2| hypothetical protein POPTR_0011s09190g [Popu... 120 2e-25
ref|XP_006654595.1| PREDICTED: DNA mismatch repair protein MSH5-... 119 3e-25
ref|XP_002529913.1| conserved hypothetical protein [Ricinus comm... 119 3e-25
ref|XP_006595730.1| PREDICTED: DNA mismatch repair protein MSH5-... 119 4e-25
ref|XP_006595729.1| PREDICTED: DNA mismatch repair protein MSH5-... 119 4e-25
ref|XP_006595728.1| PREDICTED: DNA mismatch repair protein MSH5-... 119 4e-25
gb|ESW14294.1| hypothetical protein PHAVU_008G268900g [Phaseolus... 118 7e-25
gb|ESW14293.1| hypothetical protein PHAVU_008G268900g [Phaseolus... 118 7e-25
ref|XP_004248554.1| PREDICTED: DNA mismatch repair protein MSH5-... 118 9e-25
>ref|XP_004295833.1| PREDICTED: DNA mismatch repair protein MSH5-like [Fragaria vesca
subsp. vesca]
Length = 809
Score = 125 bits (314), Expect = 6e-27
Identities = 63/89 (70%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
Frame = -2
Query: 292 RIGVSYYDSSVRQLNVLEFCEDGE-DFPIIDMVKYQANPSIIYTSTKSEECLLAALERND 116
R+GVSYYDSS+RQL+V+E EDG DFP+IDMVKYQA P IIYTSTKSEE L+AL+R+D
Sbjct: 24 RVGVSYYDSSIRQLHVMELWEDGSMDFPLIDMVKYQAKPLIIYTSTKSEEAFLSALQRSD 83
Query: 115 RGIEASTVKLVKSSLFSYEQAWHRYSFYR 29
EA VKLVKSS+FSYEQAWHR + R
Sbjct: 84 GITEAFAVKLVKSSVFSYEQAWHRLMYLR 112
>ref|XP_003617575.1| DNA mismatch repair protein mutS [Medicago truncatula]
gi|355518910|gb|AET00534.1| DNA mismatch repair protein
mutS [Medicago truncatula]
Length = 488
Score = 125 bits (314), Expect = 6e-27
Identities = 63/89 (70%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Frame = -2
Query: 292 RIGVSYYDSSVRQLNVLEFCEDGED-FPIIDMVKYQANPSIIYTSTKSEECLLAALERND 116
RIGVSYYDSS+RQLNVLE +DG++ F +ID+VKYQANP +IYTSTKSEE LAAL+++D
Sbjct: 25 RIGVSYYDSSLRQLNVLEAWDDGDNGFSVIDLVKYQANPLVIYTSTKSEESFLAALQQSD 84
Query: 115 RGIEASTVKLVKSSLFSYEQAWHRYSFYR 29
EA TVKLVKSS+FSYEQAWHR + R
Sbjct: 85 EVAEAPTVKLVKSSIFSYEQAWHRLIYLR 113
>ref|XP_006475043.1| PREDICTED: DNA mismatch repair protein MSH5-like [Citrus sinensis]
Length = 811
Score = 125 bits (313), Expect = 8e-27
Identities = 63/89 (70%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
Frame = -2
Query: 292 RIGVSYYDSSVRQLNVLEFCEDGE-DFPIIDMVKYQANPSIIYTSTKSEECLLAALERND 116
R+GVSYYDSS+RQL+VLE ED DFP+ID+VKYQA P IIYTSTKSEE L+AL+R+D
Sbjct: 25 RVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRSD 84
Query: 115 RGIEASTVKLVKSSLFSYEQAWHRYSFYR 29
EA TVKLVKSS+FSYEQAWHR + R
Sbjct: 85 GTTEAPTVKLVKSSIFSYEQAWHRLIYLR 113
>ref|XP_006452401.1| hypothetical protein CICLE_v10010304mg [Citrus clementina]
gi|557555627|gb|ESR65641.1| hypothetical protein
CICLE_v10010304mg [Citrus clementina]
Length = 799
Score = 125 bits (313), Expect = 8e-27
Identities = 63/89 (70%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
Frame = -2
Query: 292 RIGVSYYDSSVRQLNVLEFCEDGE-DFPIIDMVKYQANPSIIYTSTKSEECLLAALERND 116
R+GVSYYDSS+RQL+VLE ED DFP+ID+VKYQA P IIYTSTKSEE L+AL+R+D
Sbjct: 13 RVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRSD 72
Query: 115 RGIEASTVKLVKSSLFSYEQAWHRYSFYR 29
EA TVKLVKSS+FSYEQAWHR + R
Sbjct: 73 GTTEAPTVKLVKSSIFSYEQAWHRLIYLR 101
>gb|EMJ15717.1| hypothetical protein PRUPE_ppa015717mg [Prunus persica]
Length = 798
Score = 124 bits (311), Expect = 1e-26
Identities = 62/89 (69%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
Frame = -2
Query: 292 RIGVSYYDSSVRQLNVLEFCEDGE-DFPIIDMVKYQANPSIIYTSTKSEECLLAALERND 116
R+G+SYYDSS+RQL+VLE EDG DFP+ID+VKYQA P IIY STKSEE L+AL+R+D
Sbjct: 13 RVGISYYDSSIRQLHVLEVWEDGSTDFPLIDLVKYQARPLIIYASTKSEESFLSALQRSD 72
Query: 115 RGIEASTVKLVKSSLFSYEQAWHRYSFYR 29
EA TVKLVKSS+FSYEQAWHR + R
Sbjct: 73 GMTEAFTVKLVKSSIFSYEQAWHRLIYLR 101
>ref|XP_004149586.1| PREDICTED: DNA mismatch repair protein MSH5-like [Cucumis sativus]
gi|449519898|ref|XP_004166971.1| PREDICTED: DNA mismatch
repair protein MSH5-like [Cucumis sativus]
Length = 807
Score = 122 bits (307), Expect = 4e-26
Identities = 61/89 (68%), Positives = 74/89 (83%), Gaps = 1/89 (1%)
Frame = -2
Query: 292 RIGVSYYDSSVRQLNVLEFCEDGE-DFPIIDMVKYQANPSIIYTSTKSEECLLAALERND 116
++GVSYYDSS+RQL+VLE EDG ++P+ID+VKYQA P +IYTSTKSEE LAAL+R+D
Sbjct: 23 KVGVSYYDSSIRQLHVLEVWEDGSIEYPLIDLVKYQAKPLMIYTSTKSEESFLAALQRSD 82
Query: 115 RGIEASTVKLVKSSLFSYEQAWHRYSFYR 29
EA TVKLVKSS+FSYEQAWHR + R
Sbjct: 83 GMSEAPTVKLVKSSIFSYEQAWHRLVYLR 111
>emb|CBI26657.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 122 bits (307), Expect = 4e-26
Identities = 60/89 (67%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
Frame = -2
Query: 292 RIGVSYYDSSVRQLNVLEFCEDGE-DFPIIDMVKYQANPSIIYTSTKSEECLLAALERND 116
R+G+SYYDSS+RQL+VLE EDG DFP+ID+VKYQA P IIYTSTK E+ L+AL+R+D
Sbjct: 9 RVGISYYDSSIRQLHVLEVWEDGSSDFPLIDLVKYQAKPLIIYTSTKCEDSFLSALQRSD 68
Query: 115 RGIEASTVKLVKSSLFSYEQAWHRYSFYR 29
EA TVKL+KSS+FSYEQAWHR + R
Sbjct: 69 GTTEAPTVKLMKSSIFSYEQAWHRLIYLR 97
>ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Vitis vinifera]
Length = 807
Score = 122 bits (307), Expect = 4e-26
Identities = 60/89 (67%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
Frame = -2
Query: 292 RIGVSYYDSSVRQLNVLEFCEDGE-DFPIIDMVKYQANPSIIYTSTKSEECLLAALERND 116
R+G+SYYDSS+RQL+VLE EDG DFP+ID+VKYQA P IIYTSTK E+ L+AL+R+D
Sbjct: 23 RVGISYYDSSIRQLHVLEVWEDGSSDFPLIDLVKYQAKPLIIYTSTKCEDSFLSALQRSD 82
Query: 115 RGIEASTVKLVKSSLFSYEQAWHRYSFYR 29
EA TVKL+KSS+FSYEQAWHR + R
Sbjct: 83 GTTEAPTVKLMKSSIFSYEQAWHRLIYLR 111
>ref|XP_004491410.1| PREDICTED: DNA mismatch repair protein MSH5-like [Cicer arietinum]
Length = 809
Score = 121 bits (304), Expect = 8e-26
Identities = 61/89 (68%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
Frame = -2
Query: 292 RIGVSYYDSSVRQLNVLEFCEDGED-FPIIDMVKYQANPSIIYTSTKSEECLLAALERND 116
RIGVSYYDSS+RQL VLE +DG+ FP+ID+VKYQANP +IYTST+ EE LAAL+++D
Sbjct: 24 RIGVSYYDSSLRQLYVLEAWDDGDKGFPVIDLVKYQANPLVIYTSTRCEESFLAALQQSD 83
Query: 115 RGIEASTVKLVKSSLFSYEQAWHRYSFYR 29
EA TVKLVKSS+FSYEQAWHR + R
Sbjct: 84 EVAEAPTVKLVKSSIFSYEQAWHRLIYLR 112
>gb|EOY12305.1| MUTS [Theobroma cacao]
Length = 818
Score = 120 bits (301), Expect = 2e-25
Identities = 59/89 (66%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
Frame = -2
Query: 292 RIGVSYYDSSVRQLNVLEFCEDGE-DFPIIDMVKYQANPSIIYTSTKSEECLLAALERND 116
RIG+SYYDSS+RQLNVLE +DG DFP+I++VKYQA P +IYTSTK+EE L+AL+ +D
Sbjct: 24 RIGISYYDSSIRQLNVLEVWDDGSSDFPMIELVKYQAKPVVIYTSTKAEESFLSALQGSD 83
Query: 115 RGIEASTVKLVKSSLFSYEQAWHRYSFYR 29
EA TVKLVKSS+F+YEQAWHR + R
Sbjct: 84 GMTEAPTVKLVKSSIFTYEQAWHRLIYLR 112
>ref|XP_006338892.1| PREDICTED: DNA mismatch repair protein MSH5-like [Solanum
tuberosum]
Length = 831
Score = 120 bits (300), Expect = 2e-25
Identities = 61/87 (70%), Positives = 70/87 (80%), Gaps = 1/87 (1%)
Frame = -2
Query: 292 RIGVSYYDSSVRQLNVLEFCEDGE-DFPIIDMVKYQANPSIIYTSTKSEECLLAALERND 116
RIGVSYYD+S RQL+VLE EDG DF ++DMVKYQA P IYTSTKSEE LAAL+R+D
Sbjct: 45 RIGVSYYDASARQLHVLEIYEDGSHDFSLVDMVKYQAKPGTIYTSTKSEESFLAALQRSD 104
Query: 115 RGIEASTVKLVKSSLFSYEQAWHRYSF 35
+A +VKLVKSSLFSYEQAWHR +
Sbjct: 105 GTSDAPSVKLVKSSLFSYEQAWHRLMY 131
>ref|XP_002317341.2| hypothetical protein POPTR_0011s09190g [Populus trichocarpa]
gi|550327984|gb|EEE97953.2| hypothetical protein
POPTR_0011s09190g [Populus trichocarpa]
Length = 791
Score = 120 bits (300), Expect = 2e-25
Identities = 60/89 (67%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
Frame = -2
Query: 292 RIGVSYYDSSVRQLNVLEFCEDGE-DFPIIDMVKYQANPSIIYTSTKSEECLLAALERND 116
R+G+SYYDSS+RQL+VLE EDG DFP+ID+VKYQA P IYTSTK EE L+AL+R+D
Sbjct: 23 RVGISYYDSSIRQLHVLEVWEDGSSDFPLIDLVKYQAKPLNIYTSTKCEESFLSALQRSD 82
Query: 115 RGIEASTVKLVKSSLFSYEQAWHRYSFYR 29
EA VKLVKSS+FSYEQAWHR + R
Sbjct: 83 GTTEAPMVKLVKSSIFSYEQAWHRLIYLR 111
>ref|XP_006654595.1| PREDICTED: DNA mismatch repair protein MSH5-like [Oryza
brachyantha]
Length = 790
Score = 119 bits (299), Expect = 3e-25
Identities = 60/89 (67%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
Frame = -2
Query: 292 RIGVSYYDSSVRQLNVLEFCED-GEDFPIIDMVKYQANPSIIYTSTKSEECLLAALERND 116
R+GV+YYDSS+RQL VLE ED EDFP+ID+VKYQ+ PS IYTSTK+EE LL AL+RND
Sbjct: 9 RVGVAYYDSSMRQLFVLEIWEDIAEDFPLIDLVKYQSRPSTIYTSTKTEESLLLALQRND 68
Query: 115 RGIEASTVKLVKSSLFSYEQAWHRYSFYR 29
EA VKL+KSS FSYEQAWHR + +
Sbjct: 69 SNGEAPAVKLMKSSTFSYEQAWHRLMYLK 97
>ref|XP_002529913.1| conserved hypothetical protein [Ricinus communis]
gi|223530590|gb|EEF32467.1| conserved hypothetical
protein [Ricinus communis]
Length = 351
Score = 119 bits (299), Expect = 3e-25
Identities = 59/89 (66%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
Frame = -2
Query: 292 RIGVSYYDSSVRQLNVLEFCEDGE-DFPIIDMVKYQANPSIIYTSTKSEECLLAALERND 116
R+G+SYYDSS+RQL+VLE EDG DFP+ID+VKYQA P IY S+KSEE + AL+R+D
Sbjct: 20 RVGISYYDSSIRQLHVLEVWEDGSLDFPLIDLVKYQAQPLTIYASSKSEESFINALQRSD 79
Query: 115 RGIEASTVKLVKSSLFSYEQAWHRYSFYR 29
EA TVKLVKSS+FSYEQAWHR + R
Sbjct: 80 GTTEAPTVKLVKSSIFSYEQAWHRLIYLR 108
>ref|XP_006595730.1| PREDICTED: DNA mismatch repair protein MSH5-like isoform X3
[Glycine max]
Length = 782
Score = 119 bits (298), Expect = 4e-25
Identities = 59/89 (66%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Frame = -2
Query: 292 RIGVSYYDSSVRQLNVLEFCEDGED-FPIIDMVKYQANPSIIYTSTKSEECLLAALERND 116
RIGVSYYDS++RQL VLE +DG+ FP+ID+VKYQANP +IYTSTKSEE L+AL++ D
Sbjct: 23 RIGVSYYDSTLRQLYVLEVWDDGDKGFPVIDLVKYQANPLVIYTSTKSEESFLSALQQRD 82
Query: 115 RGIEASTVKLVKSSLFSYEQAWHRYSFYR 29
E+ VKLVKSS+FSYEQAWHR + R
Sbjct: 83 GAAESPIVKLVKSSIFSYEQAWHRLVYLR 111
>ref|XP_006595729.1| PREDICTED: DNA mismatch repair protein MSH5-like isoform X2
[Glycine max]
Length = 802
Score = 119 bits (298), Expect = 4e-25
Identities = 59/89 (66%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Frame = -2
Query: 292 RIGVSYYDSSVRQLNVLEFCEDGED-FPIIDMVKYQANPSIIYTSTKSEECLLAALERND 116
RIGVSYYDS++RQL VLE +DG+ FP+ID+VKYQANP +IYTSTKSEE L+AL++ D
Sbjct: 23 RIGVSYYDSTLRQLYVLEVWDDGDKGFPVIDLVKYQANPLVIYTSTKSEESFLSALQQRD 82
Query: 115 RGIEASTVKLVKSSLFSYEQAWHRYSFYR 29
E+ VKLVKSS+FSYEQAWHR + R
Sbjct: 83 GAAESPIVKLVKSSIFSYEQAWHRLVYLR 111
>ref|XP_006595728.1| PREDICTED: DNA mismatch repair protein MSH5-like isoform X1
[Glycine max]
Length = 812
Score = 119 bits (298), Expect = 4e-25
Identities = 59/89 (66%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Frame = -2
Query: 292 RIGVSYYDSSVRQLNVLEFCEDGED-FPIIDMVKYQANPSIIYTSTKSEECLLAALERND 116
RIGVSYYDS++RQL VLE +DG+ FP+ID+VKYQANP +IYTSTKSEE L+AL++ D
Sbjct: 23 RIGVSYYDSTLRQLYVLEVWDDGDKGFPVIDLVKYQANPLVIYTSTKSEESFLSALQQRD 82
Query: 115 RGIEASTVKLVKSSLFSYEQAWHRYSFYR 29
E+ VKLVKSS+FSYEQAWHR + R
Sbjct: 83 GAAESPIVKLVKSSIFSYEQAWHRLVYLR 111
>gb|ESW14294.1| hypothetical protein PHAVU_008G268900g [Phaseolus vulgaris]
Length = 808
Score = 118 bits (296), Expect = 7e-25
Identities = 60/89 (67%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Frame = -2
Query: 292 RIGVSYYDSSVRQLNVLEFCEDGED-FPIIDMVKYQANPSIIYTSTKSEECLLAALERND 116
RIGVSYYDS++RQL VLE +DG+ FPIID+VKYQANP +IYTSTKSEE L+ L++ D
Sbjct: 23 RIGVSYYDSTLRQLYVLEVWDDGDKGFPIIDLVKYQANPLVIYTSTKSEESFLSDLQQKD 82
Query: 115 RGIEASTVKLVKSSLFSYEQAWHRYSFYR 29
E+ TVKLVKSS+FSYEQAWHR + R
Sbjct: 83 GVAESPTVKLVKSSIFSYEQAWHRLIYLR 111
>gb|ESW14293.1| hypothetical protein PHAVU_008G268900g [Phaseolus vulgaris]
Length = 800
Score = 118 bits (296), Expect = 7e-25
Identities = 60/89 (67%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Frame = -2
Query: 292 RIGVSYYDSSVRQLNVLEFCEDGED-FPIIDMVKYQANPSIIYTSTKSEECLLAALERND 116
RIGVSYYDS++RQL VLE +DG+ FPIID+VKYQANP +IYTSTKSEE L+ L++ D
Sbjct: 23 RIGVSYYDSTLRQLYVLEVWDDGDKGFPIIDLVKYQANPLVIYTSTKSEESFLSDLQQKD 82
Query: 115 RGIEASTVKLVKSSLFSYEQAWHRYSFYR 29
E+ TVKLVKSS+FSYEQAWHR + R
Sbjct: 83 GVAESPTVKLVKSSIFSYEQAWHRLIYLR 111
>ref|XP_004248554.1| PREDICTED: DNA mismatch repair protein MSH5-like [Solanum
lycopersicum]
Length = 828
Score = 118 bits (295), Expect = 9e-25
Identities = 60/87 (68%), Positives = 70/87 (80%), Gaps = 1/87 (1%)
Frame = -2
Query: 292 RIGVSYYDSSVRQLNVLEFCEDGE-DFPIIDMVKYQANPSIIYTSTKSEECLLAALERND 116
RIGVSYYD+S RQL+VLE EDG DF ++DMVKYQA P IYTSTKSEE LAAL+R+D
Sbjct: 42 RIGVSYYDASARQLHVLEIYEDGSHDFSLVDMVKYQAKPGTIYTSTKSEESFLAALQRSD 101
Query: 115 RGIEASTVKLVKSSLFSYEQAWHRYSF 35
+A +VKLVKSSLFS+EQAWHR +
Sbjct: 102 GTSDAPSVKLVKSSLFSHEQAWHRLMY 128