BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00028239
         (310 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation spec...    68   1e-09
ref|XP_004231555.1| PREDICTED: cleavage and polyadenylation spec...    68   1e-09
ref|XP_004233145.1| PREDICTED: cleavage and polyadenylation spec...    65   9e-09
ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation spec...    63   5e-08
ref|XP_006448925.1| hypothetical protein CICLE_v10014454mg [Citr...    62   1e-07
ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citr...    62   1e-07
gb|EOX96971.1| Cleavage and polyadenylation specificity factor 3...    58   1e-06
ref|XP_006468290.1| PREDICTED: cleavage and polyadenylation spec...    55   1e-05

>ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Solanum tuberosum]
          Length = 692

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +2

Query: 191 MDDGEGGLSFDFEGGLDVGPTHPTASNPVIQQPDSSASAA 310
           MD+GEGGL+FDFEGGLD GPTHPTAS PVIQ  D +A+AA
Sbjct: 1   MDEGEGGLNFDFEGGLDTGPTHPTASVPVIQSFDHTAAAA 40


>ref|XP_004231555.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Solanum lycopersicum]
          Length = 689

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +2

Query: 191 MDDGEGGLSFDFEGGLDVGPTHPTASNPVIQQPDSSASAA 310
           MD+GEGGL+FDFEGGLD GPTHPTAS PVIQ  D +A+AA
Sbjct: 1   MDEGEGGLNFDFEGGLDTGPTHPTASVPVIQSFDHTAAAA 40


>ref|XP_004233145.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Solanum lycopersicum]
          Length = 671

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 32/41 (78%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
 Frame = +2

Query: 191 MDDGEGGLSFDFEGGLDVGPTHPTASNPVIQQ-PDSSASAA 310
           MDDGEGGL+FDFEGGLD GPTHPTAS PVIQ  P  +AS A
Sbjct: 1   MDDGEGGLNFDFEGGLDTGPTHPTASVPVIQAGPAPNASVA 41


>ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Solanum tuberosum]
          Length = 677

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = +2

Query: 191 MDDGEGGLSFDFEGGLDVGPTHPTASNPVIQ 283
           MDDGEGGL+FDFEGGLD GPTHPTAS PV+Q
Sbjct: 1   MDDGEGGLNFDFEGGLDTGPTHPTASVPVLQ 31


>ref|XP_006448925.1| hypothetical protein CICLE_v10014454mg [Citrus clementina]
           gi|557551536|gb|ESR62165.1| hypothetical protein
           CICLE_v10014454mg [Citrus clementina]
          Length = 672

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = +2

Query: 191 MDDGEGGLSFDFEGGLDVGPTHPTASNPVIQQPDSSASAA 310
           M+D EGGLSFDFEGGLD GP  PTASNP IQ   ++A+AA
Sbjct: 1   MEDSEGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAA 40


>ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citrus clementina]
           gi|557551535|gb|ESR62164.1| hypothetical protein
           CICLE_v10014454mg [Citrus clementina]
          Length = 701

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = +2

Query: 191 MDDGEGGLSFDFEGGLDVGPTHPTASNPVIQQPDSSASAA 310
           M+D EGGLSFDFEGGLD GP  PTASNP IQ   ++A+AA
Sbjct: 1   MEDSEGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAA 40


>gb|EOX96971.1| Cleavage and polyadenylation specificity factor 30 [Theobroma
           cacao]
          Length = 698

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 26/38 (68%), Positives = 29/38 (76%)
 Frame = +2

Query: 191 MDDGEGGLSFDFEGGLDVGPTHPTASNPVIQQPDSSAS 304
           MDD EGGLSFDFEGGLD GP  PTAS PV+    S+A+
Sbjct: 1   MDDSEGGLSFDFEGGLDAGPAAPTASMPVVNSDPSAAA 38


>ref|XP_006468290.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Citrus sinensis]
          Length = 683

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/39 (69%), Positives = 29/39 (74%)
 Frame = +2

Query: 191 MDDGEGGLSFDFEGGLDVGPTHPTASNPVIQQPDSSASA 307
           M+D EGGLSFDFEGGLD GP  PTASNP    P SS +A
Sbjct: 1   MEDSEGGLSFDFEGGLDAGPGMPTASNPA-AAPSSSGAA 38