BLASTX nr result
ID: Rauwolfia21_contig00028179
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rauwolfia21_contig00028179 (1135 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006366529.1| PREDICTED: F-box protein At5g07610-like [Sol... 67 1e-11 >ref|XP_006366529.1| PREDICTED: F-box protein At5g07610-like [Solanum tuberosum] Length = 403 Score = 67.0 bits (162), Expect(2) = 1e-11 Identities = 53/131 (40%), Positives = 69/131 (52%), Gaps = 16/131 (12%) Frame = -2 Query: 876 KSN*NAYNLAIKQLKTLGQGVDLGLIKVIQGVALAFGPSKSP*YIQVVYVEDVM------ 715 K+N N K TL + V I G++LAF P KSP Y +VV V D + Sbjct: 155 KANYYVCNPTTKHYTTLPKSVLETENSKIHGISLAFDPLKSPHY-KVVCVRDSVSSPQHY 213 Query: 714 ----FSYQTLP-R*V*VGPFMVDIKFQKDGVLQYWDDAIH*LGA*GNMTSLCYD-----V 565 +S QT P R PF+ D+ F K GV YW+ +IH + GN+TSLCY+ + Sbjct: 214 QIEIYSSQTGPWRLSGDDPFIADVNFSK-GV--YWNGSIHWISTIGNLTSLCYNLDFESL 270 Query: 564 GVMPMPPIPDD 532 GVMPMP +PDD Sbjct: 271 GVMPMPSLPDD 281 Score = 30.0 bits (66), Expect(2) = 1e-11 Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 2/104 (1%) Frame = -1 Query: 502 ESSDHLHLIQMHGQQFEFNVQGMNRNIPHGLSSSIFSCD*NSWTG*ETNYINCYSSSVFS 323 ES DHLHLI+ F+V M R+ + + +N Y+ +V S Sbjct: 291 ESCDHLHLIKFSFSTVRFDVYEMKRDYSEWFVKYKVDLE-------HPHELNYYNFTVLS 343 Query: 322 LIRXXXXXXXXXXX*IPG--SPIVAIL*LEHFRHFPNLEGADEE 197 L+R IPG + + + F + EGADE+ Sbjct: 344 LVRGRREEDAFLVLAIPGDCKAMRYNIIEKTFEKLCDYEGADEQ 387