BLASTX nr result

ID: Rauwolfia21_contig00028179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00028179
         (1135 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006366529.1| PREDICTED: F-box protein At5g07610-like [Sol...    67   1e-11

>ref|XP_006366529.1| PREDICTED: F-box protein At5g07610-like [Solanum tuberosum]
          Length = 403

 Score = 67.0 bits (162), Expect(2) = 1e-11
 Identities = 53/131 (40%), Positives = 69/131 (52%), Gaps = 16/131 (12%)
 Frame = -2

Query: 876 KSN*NAYNLAIKQLKTLGQGVDLGLIKVIQGVALAFGPSKSP*YIQVVYVEDVM------ 715
           K+N    N   K   TL + V       I G++LAF P KSP Y +VV V D +      
Sbjct: 155 KANYYVCNPTTKHYTTLPKSVLETENSKIHGISLAFDPLKSPHY-KVVCVRDSVSSPQHY 213

Query: 714 ----FSYQTLP-R*V*VGPFMVDIKFQKDGVLQYWDDAIH*LGA*GNMTSLCYD-----V 565
               +S QT P R     PF+ D+ F K GV  YW+ +IH +   GN+TSLCY+     +
Sbjct: 214 QIEIYSSQTGPWRLSGDDPFIADVNFSK-GV--YWNGSIHWISTIGNLTSLCYNLDFESL 270

Query: 564 GVMPMPPIPDD 532
           GVMPMP +PDD
Sbjct: 271 GVMPMPSLPDD 281



 Score = 30.0 bits (66), Expect(2) = 1e-11
 Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
 Frame = -1

Query: 502 ESSDHLHLIQMHGQQFEFNVQGMNRNIPHGLSSSIFSCD*NSWTG*ETNYINCYSSSVFS 323
           ES DHLHLI+       F+V  M R+            +         + +N Y+ +V S
Sbjct: 291 ESCDHLHLIKFSFSTVRFDVYEMKRDYSEWFVKYKVDLE-------HPHELNYYNFTVLS 343

Query: 322 LIRXXXXXXXXXXX*IPG--SPIVAIL*LEHFRHFPNLEGADEE 197
           L+R            IPG    +   +  + F    + EGADE+
Sbjct: 344 LVRGRREEDAFLVLAIPGDCKAMRYNIIEKTFEKLCDYEGADEQ 387


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