BLASTX nr result

ID: Rauwolfia21_contig00028064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00028064
         (348 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006492377.1| PREDICTED: putative pentatricopeptide repeat...    58   1e-06
ref|XP_006444562.1| hypothetical protein CICLE_v10019795mg [Citr...    58   1e-06
ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat...    56   6e-06

>ref|XP_006492377.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Citrus sinensis]
          Length = 506

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 32/76 (42%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
 Frame = -1

Query: 219 RYAFSVSLFSTSIPRDMENPFPFSQSTAQDDDVETVFRILTTS---KDVKESLKSAAASI 49
           +YA  +S  S +    +   +  S  + ++DDV+T+FRI+T+S   K +K+SLKS  + +
Sbjct: 9   KYASKLSFLSKNATSLISRLYFSSDISPKNDDVDTIFRIITSSTSCKHLKQSLKS--SEV 66

Query: 48  SFSNDLIDKVLKRVRF 1
           + SNDL+DK+LKRVRF
Sbjct: 67  NISNDLVDKILKRVRF 82


>ref|XP_006444562.1| hypothetical protein CICLE_v10019795mg [Citrus clementina]
           gi|557546824|gb|ESR57802.1| hypothetical protein
           CICLE_v10019795mg [Citrus clementina]
          Length = 506

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 32/76 (42%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
 Frame = -1

Query: 219 RYAFSVSLFSTSIPRDMENPFPFSQSTAQDDDVETVFRILTTS---KDVKESLKSAAASI 49
           +YA  +S  S +    +   +  S  + ++DDV+T+FRI+T+S   K +K+SLKS  + +
Sbjct: 9   KYASKLSFLSKNATSLISRLYFSSDISPKNDDVDTIFRIITSSTSCKHLKQSLKS--SEV 66

Query: 48  SFSNDLIDKVLKRVRF 1
           + SNDL+DK+LKRVRF
Sbjct: 67  NISNDLVDKILKRVRF 82


>ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Vitis vinifera]
          Length = 526

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/98 (41%), Positives = 59/98 (60%), Gaps = 11/98 (11%)
 Frame = -1

Query: 261 KPFCLHSSVSRTRRRYAFSVSLFS-TSIPRDMENPFP-------FSQSTAQDDDVETVFR 106
           KP  L SS      RYA S+S     S P++  + F         +++T  + DVETVFR
Sbjct: 11  KPLSLQSS-----SRYAPSISTIGLNSNPQNPSSVFSRLYWSETIAETTVDNGDVETVFR 65

Query: 105 ILTTS---KDVKESLKSAAASISFSNDLIDKVLKRVRF 1
           I++++   +++K+SLKS+   +  SNDLIDKVLKRVRF
Sbjct: 66  IVSSASSTRNLKQSLKSSG--VFLSNDLIDKVLKRVRF 101


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