BLASTX nr result

ID: Rauwolfia21_contig00027920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00027920
         (346 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40653.3| unnamed protein product [Vitis vinifera]              122   5e-26
ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containi...   122   5e-26
ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25
ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25
ref|XP_004499782.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
ref|XP_006347159.1| PREDICTED: pentatricopeptide repeat-containi...   115   5e-24
ref|XP_002303960.2| hypothetical protein POPTR_0003s19010g [Popu...   115   5e-24
gb|ESW20786.1| hypothetical protein PHAVU_005G014700g [Phaseolus...   114   2e-23
ref|XP_004233812.1| PREDICTED: pentatricopeptide repeat-containi...   114   2e-23
gb|EPS57776.1| hypothetical protein M569_17040, partial [Genlise...   113   3e-23
gb|EMJ21454.1| hypothetical protein PRUPE_ppa001444mg [Prunus pe...   112   7e-23
ref|XP_002525566.1| pentatricopeptide repeat-containing protein,...   108   1e-21
gb|EXB44298.1| hypothetical protein L484_012217 [Morus notabilis]     107   2e-21
ref|NP_172596.1| pentatricopeptide repeat-containing protein [Ar...   103   2e-20
ref|XP_002892635.1| pentatricopeptide repeat-containing protein ...   103   3e-20
ref|XP_006432351.1| hypothetical protein CICLE_v10000307mg [Citr...   102   4e-20
ref|XP_006304494.1| hypothetical protein CARUB_v10011264mg [Caps...   102   7e-20
ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
ref|XP_006393717.1| hypothetical protein EUTSA_v10011247mg [Eutr...    99   4e-19

>emb|CBI40653.3| unnamed protein product [Vitis vinifera]
          Length = 597

 Score =  122 bits (306), Expect = 5e-26
 Identities = 54/73 (73%), Positives = 66/73 (90%)
 Frame = -3

Query: 221 HIPDHVYKHPAAILLELCTCTKELQQFLPLVIKNGLYNEHLFQTKLISLFCKFGSLNDAV 42
           +IP HVYKHP+AILLELCT  KEL QF+PL+IKNGLY+EHLFQTKL+SLFCKFGSL++A 
Sbjct: 76  YIPSHVYKHPSAILLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAA 135

Query: 41  KVFEPVELKVDPL 3
           +VF+P+E K+D L
Sbjct: 136 RVFQPIEDKIDEL 148


>ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  122 bits (306), Expect = 5e-26
 Identities = 54/73 (73%), Positives = 66/73 (90%)
 Frame = -3

Query: 221 HIPDHVYKHPAAILLELCTCTKELQQFLPLVIKNGLYNEHLFQTKLISLFCKFGSLNDAV 42
           +IP HVYKHP+AILLELCT  KEL QF+PL+IKNGLY+EHLFQTKL+SLFCKFGSL++A 
Sbjct: 70  YIPSHVYKHPSAILLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAA 129

Query: 41  KVFEPVELKVDPL 3
           +VF+P+E K+D L
Sbjct: 130 RVFQPIEDKIDEL 142


>ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  120 bits (302), Expect = 1e-25
 Identities = 54/73 (73%), Positives = 64/73 (87%)
 Frame = -3

Query: 221 HIPDHVYKHPAAILLELCTCTKELQQFLPLVIKNGLYNEHLFQTKLISLFCKFGSLNDAV 42
           HIP HVYKHPAA+LLELCT  KEL Q +PLVIKNGLYNEHLFQTKL+SLF K+GS+N+A 
Sbjct: 42  HIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAA 101

Query: 41  KVFEPVELKVDPL 3
           +VFEP++ K+D L
Sbjct: 102 RVFEPIDDKLDAL 114


>ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  120 bits (302), Expect = 1e-25
 Identities = 54/73 (73%), Positives = 64/73 (87%)
 Frame = -3

Query: 221 HIPDHVYKHPAAILLELCTCTKELQQFLPLVIKNGLYNEHLFQTKLISLFCKFGSLNDAV 42
           HIP HVYKHPAA+LLELCT  KEL Q +PLVIKNGLYNEHLFQTKL+SLF K+GS+N+A 
Sbjct: 42  HIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAA 101

Query: 41  KVFEPVELKVDPL 3
           +VFEP++ K+D L
Sbjct: 102 RVFEPIDDKLDAL 114


>ref|XP_004499782.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cicer arietinum]
          Length = 814

 Score =  117 bits (293), Expect = 2e-24
 Identities = 54/72 (75%), Positives = 62/72 (86%)
 Frame = -3

Query: 218 IPDHVYKHPAAILLELCTCTKELQQFLPLVIKNGLYNEHLFQTKLISLFCKFGSLNDAVK 39
           IP HVY+HP+AILLELCT  KEL Q LPL+IKNG YNEHLFQTKLISLFCK+GS+N+A +
Sbjct: 35  IPTHVYRHPSAILLELCTSMKELHQILPLIIKNGFYNEHLFQTKLISLFCKYGSINEASR 94

Query: 38  VFEPVELKVDPL 3
           VF PVE K+D L
Sbjct: 95  VFNPVENKLDVL 106


>ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  117 bits (292), Expect = 2e-24
 Identities = 54/72 (75%), Positives = 61/72 (84%)
 Frame = -3

Query: 218 IPDHVYKHPAAILLELCTCTKELQQFLPLVIKNGLYNEHLFQTKLISLFCKFGSLNDAVK 39
           IP HVY+HP+AILLELCT  KEL Q LPL+IKNG YNEHLFQTKLISLFCKF S+ +A +
Sbjct: 38  IPSHVYRHPSAILLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAAR 97

Query: 38  VFEPVELKVDPL 3
           VFEPVE K+D L
Sbjct: 98  VFEPVEHKLDVL 109


>ref|XP_006347159.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Solanum tuberosum]
          Length = 809

 Score =  115 bits (289), Expect = 5e-24
 Identities = 53/73 (72%), Positives = 60/73 (82%)
 Frame = -3

Query: 221 HIPDHVYKHPAAILLELCTCTKELQQFLPLVIKNGLYNEHLFQTKLISLFCKFGSLNDAV 42
           HIP H+YKHP AILLELC   KEL Q LP +IKNGLY EHLF+TKL+SLF K+GSLNDA 
Sbjct: 29  HIPSHIYKHPTAILLELCNSMKELHQILPHIIKNGLYKEHLFETKLVSLFTKYGSLNDAT 88

Query: 41  KVFEPVELKVDPL 3
           KVFE  +LKVDP+
Sbjct: 89  KVFEFAKLKVDPM 101


>ref|XP_002303960.2| hypothetical protein POPTR_0003s19010g [Populus trichocarpa]
           gi|550343509|gb|EEE78939.2| hypothetical protein
           POPTR_0003s19010g [Populus trichocarpa]
          Length = 812

 Score =  115 bits (289), Expect = 5e-24
 Identities = 53/73 (72%), Positives = 62/73 (84%)
 Frame = -3

Query: 221 HIPDHVYKHPAAILLELCTCTKELQQFLPLVIKNGLYNEHLFQTKLISLFCKFGSLNDAV 42
           HIP H+YKHPAAILLELCT +KE+ Q LP +IKNGLYNE LFQTKLISLFCK+G+L +A 
Sbjct: 33  HIPSHIYKHPAAILLELCTSSKEVHQILPQIIKNGLYNETLFQTKLISLFCKYGNLTEAS 92

Query: 41  KVFEPVELKVDPL 3
           +VFEP+E K D L
Sbjct: 93  RVFEPIEDKFDAL 105


>gb|ESW20786.1| hypothetical protein PHAVU_005G014700g [Phaseolus vulgaris]
          Length = 814

 Score =  114 bits (284), Expect = 2e-23
 Identities = 52/72 (72%), Positives = 60/72 (83%)
 Frame = -3

Query: 218 IPDHVYKHPAAILLELCTCTKELQQFLPLVIKNGLYNEHLFQTKLISLFCKFGSLNDAVK 39
           IP HVY+HP+A+LLELCT  KEL Q LPLVIKNG Y+EH FQTKLISLFCKF S+ +A +
Sbjct: 36  IPSHVYRHPSAVLLELCTSLKELHQILPLVIKNGFYDEHFFQTKLISLFCKFSSITEAAR 95

Query: 38  VFEPVELKVDPL 3
           VFEPVE K+D L
Sbjct: 96  VFEPVEQKLDVL 107


>ref|XP_004233812.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Solanum lycopersicum]
          Length = 811

 Score =  114 bits (284), Expect = 2e-23
 Identities = 52/73 (71%), Positives = 59/73 (80%)
 Frame = -3

Query: 221 HIPDHVYKHPAAILLELCTCTKELQQFLPLVIKNGLYNEHLFQTKLISLFCKFGSLNDAV 42
           HIP H+YKHP AILLELC   KEL Q LP +IKNGLY EHLF+TKL+SLF K+G LNDA 
Sbjct: 31  HIPSHIYKHPTAILLELCNSMKELHQILPHIIKNGLYKEHLFETKLVSLFTKYGCLNDAT 90

Query: 41  KVFEPVELKVDPL 3
           KVFE  +LKVDP+
Sbjct: 91  KVFEFAKLKVDPM 103


>gb|EPS57776.1| hypothetical protein M569_17040, partial [Genlisea aurea]
          Length = 770

 Score =  113 bits (282), Expect = 3e-23
 Identities = 55/73 (75%), Positives = 62/73 (84%)
 Frame = -3

Query: 221 HIPDHVYKHPAAILLELCTCTKELQQFLPLVIKNGLYNEHLFQTKLISLFCKFGSLNDAV 42
           HIP  V KHPAAILL+LC+   EL QFLPLVIK+GLY+E   QTKL+SLFCK GSLNDAV
Sbjct: 5   HIPAGVSKHPAAILLQLCSSMTELHQFLPLVIKSGLYDELHLQTKLVSLFCKLGSLNDAV 64

Query: 41  KVFEPVELKVDPL 3
           KVFEPVE+K+DPL
Sbjct: 65  KVFEPVEVKIDPL 77


>gb|EMJ21454.1| hypothetical protein PRUPE_ppa001444mg [Prunus persica]
          Length = 827

 Score =  112 bits (279), Expect = 7e-23
 Identities = 51/71 (71%), Positives = 60/71 (84%)
 Frame = -3

Query: 221 HIPDHVYKHPAAILLELCTCTKELQQFLPLVIKNGLYNEHLFQTKLISLFCKFGSLNDAV 42
           HIP HVY HPAAILLELCT  KEL Q +PL+IKNGLYNEHLFQTKL+SLFC +GS ++A 
Sbjct: 48  HIPSHVYTHPAAILLELCTSIKELNQIIPLIIKNGLYNEHLFQTKLVSLFCNYGSPSEAF 107

Query: 41  KVFEPVELKVD 9
           +VFE VE K++
Sbjct: 108 RVFETVEDKLE 118


>ref|XP_002525566.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535145|gb|EEF36825.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 563

 Score =  108 bits (269), Expect = 1e-21
 Identities = 47/73 (64%), Positives = 59/73 (80%)
 Frame = -3

Query: 221 HIPDHVYKHPAAILLELCTCTKELQQFLPLVIKNGLYNEHLFQTKLISLFCKFGSLNDAV 42
           +IP H+YKHP A+LLELCT  KEL Q +P +IKNG Y+E LFQTKLISLFC +GSL +A 
Sbjct: 37  YIPGHIYKHPTAVLLELCTSVKELHQIIPSIIKNGFYSEELFQTKLISLFCNYGSLTEAA 96

Query: 41  KVFEPVELKVDPL 3
           +VFEP+E K++ L
Sbjct: 97  RVFEPIENKLEAL 109


>gb|EXB44298.1| hypothetical protein L484_012217 [Morus notabilis]
          Length = 814

 Score =  107 bits (267), Expect = 2e-21
 Identities = 51/73 (69%), Positives = 60/73 (82%)
 Frame = -3

Query: 221 HIPDHVYKHPAAILLELCTCTKELQQFLPLVIKNGLYNEHLFQTKLISLFCKFGSLNDAV 42
           HIP HVYKHPAAILLEL T  +EL+Q LPL+IKNGLY E LFQTKL+S FCK+GSL ++ 
Sbjct: 35  HIPSHVYKHPAAILLELSTSLQELRQILPLIIKNGLYGELLFQTKLVSSFCKYGSLTESA 94

Query: 41  KVFEPVELKVDPL 3
           +VF+ VE KVD L
Sbjct: 95  RVFDSVEDKVDAL 107


>ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g11290 gi|332190592|gb|AEE28713.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  103 bits (258), Expect = 2e-20
 Identities = 45/73 (61%), Positives = 62/73 (84%)
 Frame = -3

Query: 221 HIPDHVYKHPAAILLELCTCTKELQQFLPLVIKNGLYNEHLFQTKLISLFCKFGSLNDAV 42
           +IP +VY+HPAA+LLE C+  KEL+Q LPLV KNGLY EH FQTKL+SLFC++GS+++A 
Sbjct: 30  YIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAA 89

Query: 41  KVFEPVELKVDPL 3
           +VFEP++ K++ L
Sbjct: 90  RVFEPIDSKLNVL 102


>ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338477|gb|EFH68894.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 809

 Score =  103 bits (256), Expect = 3e-20
 Identities = 44/73 (60%), Positives = 62/73 (84%)
 Frame = -3

Query: 221 HIPDHVYKHPAAILLELCTCTKELQQFLPLVIKNGLYNEHLFQTKLISLFCKFGSLNDAV 42
           +IP +VY+HPAA+LLE C+  KEL+  LPL+ KNGLY EHLFQTKL+SLFC++GS+++A 
Sbjct: 30  YIPANVYEHPAALLLERCSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAA 89

Query: 41  KVFEPVELKVDPL 3
           +VFEP++ K++ L
Sbjct: 90  RVFEPIDKKLNVL 102


>ref|XP_006432351.1| hypothetical protein CICLE_v10000307mg [Citrus clementina]
           gi|568883789|ref|XP_006494628.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g11290-like isoform X1 [Citrus sinensis]
           gi|568883791|ref|XP_006494629.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g11290-like isoform X2 [Citrus sinensis]
           gi|568883793|ref|XP_006494630.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g11290-like isoform X3 [Citrus sinensis]
           gi|568883795|ref|XP_006494631.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g11290-like isoform X4 [Citrus sinensis]
           gi|557534473|gb|ESR45591.1| hypothetical protein
           CICLE_v10000307mg [Citrus clementina]
          Length = 812

 Score =  102 bits (255), Expect = 4e-20
 Identities = 44/73 (60%), Positives = 62/73 (84%)
 Frame = -3

Query: 221 HIPDHVYKHPAAILLELCTCTKELQQFLPLVIKNGLYNEHLFQTKLISLFCKFGSLNDAV 42
           +IP  +Y+HP+A+LLE+CT  KEL++ LPL+IK+GL ++HLFQTKL+SLFCK+ SL+DA 
Sbjct: 33  YIPSRIYRHPSALLLEVCTSLKELRRILPLIIKSGLCDQHLFQTKLVSLFCKYNSLSDAA 92

Query: 41  KVFEPVELKVDPL 3
           +VFEP+  K+D L
Sbjct: 93  RVFEPIPDKLDAL 105


>ref|XP_006304494.1| hypothetical protein CARUB_v10011264mg [Capsella rubella]
           gi|482573205|gb|EOA37392.1| hypothetical protein
           CARUB_v10011264mg [Capsella rubella]
          Length = 811

 Score =  102 bits (253), Expect = 7e-20
 Identities = 45/73 (61%), Positives = 61/73 (83%)
 Frame = -3

Query: 221 HIPDHVYKHPAAILLELCTCTKELQQFLPLVIKNGLYNEHLFQTKLISLFCKFGSLNDAV 42
           +IP +VY+HPAA+LLE C+  K+L+  LPLV KNGLY EHLFQTKL+SLFC++GS+ +A 
Sbjct: 32  YIPANVYEHPAALLLERCSSLKDLRHILPLVFKNGLYQEHLFQTKLVSLFCRYGSVVEAA 91

Query: 41  KVFEPVELKVDPL 3
           +VFEP++ K+D L
Sbjct: 92  RVFEPIDDKLDVL 104


>ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  100 bits (250), Expect = 2e-19
 Identities = 49/74 (66%), Positives = 58/74 (78%), Gaps = 2/74 (2%)
 Frame = -3

Query: 218 IPDHVY--KHPAAILLELCTCTKELQQFLPLVIKNGLYNEHLFQTKLISLFCKFGSLNDA 45
           IP  VY  +HP+ +LLE CT  KEL Q LP +IKNG YNEHLFQTK+ISLFCKFGS ++A
Sbjct: 39  IPTRVYSHRHPSVVLLENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEA 98

Query: 44  VKVFEPVELKVDPL 3
            +VFE VELK+D L
Sbjct: 99  ARVFEHVELKLDVL 112


>ref|XP_006393717.1| hypothetical protein EUTSA_v10011247mg [Eutrema salsugineum]
           gi|557090295|gb|ESQ31003.1| hypothetical protein
           EUTSA_v10011247mg [Eutrema salsugineum]
          Length = 807

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 44/73 (60%), Positives = 59/73 (80%)
 Frame = -3

Query: 221 HIPDHVYKHPAAILLELCTCTKELQQFLPLVIKNGLYNEHLFQTKLISLFCKFGSLNDAV 42
           +IP +VY+HP A+LLE C+  K L+  LPLV KNGLY EHLFQTKL+SLFC++GS+ +A 
Sbjct: 28  YIPANVYEHPTALLLEKCSSLKHLRHVLPLVFKNGLYQEHLFQTKLVSLFCRYGSVVEAA 87

Query: 41  KVFEPVELKVDPL 3
           +VFEP++ K+D L
Sbjct: 88  RVFEPIDDKLDVL 100


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