BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00027898
         (517 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]         67   2e-09
gb|EOY09126.1| Uncharacterized protein TCM_024518 [Theobroma cacao]    63   4e-08
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    63   5e-08
gb|EOY22705.1| Transducin/WD40 repeat-like superfamily protein [...    62   1e-07
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...    59   9e-07
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...    59   9e-07
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...    59   9e-07
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]            59   9e-07
gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul...    59   9e-07
ref|XP_006848683.1| hypothetical protein AMTR_s02463p00000880, p...    57   3e-06
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]    57   3e-06
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]    56   6e-06
emb|CAN66743.1| hypothetical protein VITISV_043469 [Vitis vinifera]    56   6e-06
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    55   7e-06
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]    55   7e-06

>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 6/156 (3%)
 Frame = +1

Query: 16  KISDQEQALLLLASLPKSYRPIVQTLLVGRTEITLDQAMTVLRENERMMSQVDIRSTGDE 195
           KI D+++A  LL+SLPKSY   V T+L GRT +TL+     L   E +    ++ ++  E
Sbjct: 141 KICDEDKAFFLLSSLPKSYEGFVDTMLYGRTTLTLEDVKASLSSKE-IQKNCELETSNGE 199

Query: 196 NTLAIAXXXXXXXXXXXXXXXXXXSKSKPRDFSNIECYYCGEKGHIQSRCQKMRDDLKSF 375
             +A                     ++  +     +C+YC ++GH    C +     K  
Sbjct: 200 GLMARTEKKKDQKNKNQGKGHGKNQETADKKKKKRKCFYCRKEGHYIRDCFE-----KKK 254

Query: 376 KRMQEKLGKVKVDDEDGSSN------MVCSNSSEDG 465
           K  QEK G   V  +DGS        +V SNS+  G
Sbjct: 255 KESQEKSGDAAVASDDGSDGYQSADLLVASNSNTKG 290


>gb|EOY09126.1| Uncharacterized protein TCM_024518 [Theobroma cacao]
          Length = 277

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 43/141 (30%), Positives = 56/141 (39%)
 Frame = +1

Query: 1   KNADEKISDQEQALLLLASLPKSYRPIVQTLLVGRTEITLDQAMTVLRENERMMSQVDIR 180
           KN D KI D++ AL+LL  LP SY   V T+L GR  +T +     L   E       IR
Sbjct: 135 KNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLTFEDVRAYLNSKELKKKVGGIR 194

Query: 181 STGDENTLAIAXXXXXXXXXXXXXXXXXXSKSKPRDFSNIECYYCGEKGHIQSRCQKMRD 360
           +      L +                    K+         C+ CG+KGH +  C K +D
Sbjct: 195 NENQAEGLVVNRGRGKEKGLDKKGKSRAKGKT---------CWNCGQKGHFRQDCTKFKD 245

Query: 361 DLKSFKRMQEKLGKVKVDDED 423
           D K  K   E    V  DD D
Sbjct: 246 DEKFNK--SENTANVVGDDFD 264


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
 Frame = +1

Query: 1   KNADEKISDQEQALLLLASLPKSYRPIVQTLLVGRTEITLDQAMTVLRENE-RMMSQVDI 177
           K +D K  D++ AL+LL+SLP  +  +  TLL G+  ++LD   + L  +E R   ++  
Sbjct: 74  KKSDVKFEDEDLALMLLSSLPDEFEHLETTLLHGKENVSLDVVCSALYSHELRKQDKMKT 133

Query: 178 RSTGDENTLAIAXXXXXXXXXXXXXXXXXXSKSKPRDFSNIECYYCGEKGHIQSRCQKMR 357
           +ST  E  L                     SKSK R  +  EC +C EKGH +  C K++
Sbjct: 134 KSTTSEEALV-----ARGRQQSQTKERRGMSKSKGRAVAKDECAFCHEKGHWKKDCPKLQ 188

Query: 358 DDLKSFKRMQE-KLGKVKVDDEDGSSNMVCSNSS 456
              K  K +Q+  + + K D E   S +V  ++S
Sbjct: 189 ---KKEKVLQDANVAECKSDVESDISLIVSLSAS 219


>gb|EOY22705.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
          Length = 1029

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 43/141 (30%), Positives = 56/141 (39%)
 Frame = +1

Query: 1   KNADEKISDQEQALLLLASLPKSYRPIVQTLLVGRTEITLDQAMTVLRENERMMSQVDIR 180
           KN D KI D++ AL+LL  LP SY   V T+L GR  +T +     L   E       IR
Sbjct: 257 KNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLTFEDVRASLNFKELKKKVGGIR 316

Query: 181 STGDENTLAIAXXXXXXXXXXXXXXXXXXSKSKPRDFSNIECYYCGEKGHIQSRCQKMRD 360
           +      L +                    K+         C+ CG+KGH +  C K +D
Sbjct: 317 NENQAEGLVVNRGRGKEKGLDRKGKSRAKGKT---------CWNCGQKGHFRQDCTKFKD 367

Query: 361 DLKSFKRMQEKLGKVKVDDED 423
           D K  K   E    V  DD D
Sbjct: 368 DEKFNK--SENTANVVGDDFD 386


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 47/150 (31%), Positives = 65/150 (43%), Gaps = 8/150 (5%)
 Frame = +1

Query: 16  KISDQEQALLLLASLPKSYRPIVQTLLVGRTEITLDQAMTVLRENERM--MSQVDIRSTG 189
           K  D++  LLLL SLP SY     T+L+ R E+TL +    L+  E+M  M Q D  S+ 
Sbjct: 135 KYDDEDLGLLLLCSLPNSYANFRDTILLSRDELTLKEVYDALQNKEKMKIMVQNDGSSSS 194

Query: 190 DENTLAIAXXXXXXXXXXXXXXXXXXSKSKPRDFSNIECYYCGEKGHIQSRCQKMRDDLK 369
               L +                   SKSKP       C YC  K H    C+K    ++
Sbjct: 195 KGEALHVRGRTENRTSNEKNYDRRGRSKSKPPGNKKF-CVYCKLKNHNIDECKK----VQ 249

Query: 370 SFKRMQEKLGKVKV------DDEDGSSNMV 441
           + +R  +K GKV V      DD+ G   +V
Sbjct: 250 AKERKNKKDGKVSVASAAASDDDSGDCLVV 279


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 47/150 (31%), Positives = 65/150 (43%), Gaps = 8/150 (5%)
 Frame = +1

Query: 16  KISDQEQALLLLASLPKSYRPIVQTLLVGRTEITLDQAMTVLRENERM--MSQVDIRSTG 189
           K  D++  LLLL SLP SY     T+L+ R E+TL +    L+  E+M  M Q D  S+ 
Sbjct: 135 KYDDEDLGLLLLCSLPNSYANFRDTILLSRDELTLKEVYDALQNKEKMKIMVQNDGSSSS 194

Query: 190 DENTLAIAXXXXXXXXXXXXXXXXXXSKSKPRDFSNIECYYCGEKGHIQSRCQKMRDDLK 369
               L +                   SKSKP       C YC  K H    C+K    ++
Sbjct: 195 KGEALHVRGRTENRTSNEKNYDRRGRSKSKPPGNKKF-CVYCKLKNHNIDECKK----VQ 249

Query: 370 SFKRMQEKLGKVKV------DDEDGSSNMV 441
           + +R  +K GKV V      DD+ G   +V
Sbjct: 250 AKERKNKKDGKVSVASAAASDDDSGDCLVV 279


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549942|gb|ABA92739.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1373

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 47/150 (31%), Positives = 65/150 (43%), Gaps = 8/150 (5%)
 Frame = +1

Query: 16  KISDQEQALLLLASLPKSYRPIVQTLLVGRTEITLDQAMTVLRENERM--MSQVDIRSTG 189
           K  D++  LLLL SLP SY     T+L+ R E+TL +    L+  E+M  M Q D  S+ 
Sbjct: 135 KYDDEDLGLLLLCSLPNSYANFRDTILLSRDELTLKEVYDALQNKEKMKIMVQNDGSSSS 194

Query: 190 DENTLAIAXXXXXXXXXXXXXXXXXXSKSKPRDFSNIECYYCGEKGHIQSRCQKMRDDLK 369
               L +                   SKSKP       C YC  K H    C+K    ++
Sbjct: 195 KGEALHVRGRTENRTSNEKNYDRRGRSKSKPPGNKKF-CVYCKLKNHNIDECKK----VQ 249

Query: 370 SFKRMQEKLGKVKV------DDEDGSSNMV 441
           + +R  +K GKV V      DD+ G   +V
Sbjct: 250 AKERKNKKDGKVSVASAAASDDDSGDCLVV 279


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 47/150 (31%), Positives = 65/150 (43%), Gaps = 8/150 (5%)
 Frame = +1

Query: 16  KISDQEQALLLLASLPKSYRPIVQTLLVGRTEITLDQAMTVLRENERM--MSQVDIRSTG 189
           K  D++  LLLL SLP SY     T+L+ R E+TL +    L+  E+M  M Q D  S+ 
Sbjct: 137 KYDDEDLGLLLLCSLPNSYANFRDTILLSRDELTLKEVYDALQNKEKMKIMVQNDGSSSS 196

Query: 190 DENTLAIAXXXXXXXXXXXXXXXXXXSKSKPRDFSNIECYYCGEKGHIQSRCQKMRDDLK 369
               L +                   SKSKP       C YC  K H    C+K    ++
Sbjct: 197 KGEALHVRGRTENKTSNEKNYDRRGRSKSKPPGNKKF-CVYCKLKNHNIDECKK----VQ 251

Query: 370 SFKRMQEKLGKVKV------DDEDGSSNMV 441
           + +R  +K GKV V      DD+ G   +V
Sbjct: 252 AKERKNKKDGKVSVASAAVSDDDSGDCLVV 281


>gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris]
          Length = 324

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 1/159 (0%)
 Frame = +1

Query: 4   NADEKISDQEQALLLLASLPKSYRPIVQTLLVGRTEITLDQAMTVLRENE-RMMSQVDIR 180
           N D K  D++ AL+L++SLP  +  +  TLL G+  ++LD   + L  +E R   ++  +
Sbjct: 114 NLDVKFEDEDLALMLVSSLPDEFEHLETTLLHGKDNVSLDVVCSALYSHELRKQDKMKTK 173

Query: 181 STGDENTLAIAXXXXXXXXXXXXXXXXXXSKSKPRDFSNIECYYCGEKGHIQSRCQKMRD 360
           ST  E  L                      KSK R  +  EC +C EKGH +  C K++ 
Sbjct: 174 STTSEEALV-----TRGGQQSQTKERRGMCKSKGRVVAKDECAFCHEKGHWKKDCPKLQK 228

Query: 361 DLKSFKRMQEKLGKVKVDDEDGSSNMVCSNSSEDGDVYL 477
             K        + + K D E   S +V  ++S   D ++
Sbjct: 229 --KEKVPQDANVAECKSDVESDISLIVSLSASSYPDEWI 265


>ref|XP_006848683.1| hypothetical protein AMTR_s02463p00000880, partial [Amborella
           trichopoda] gi|548852081|gb|ERN10264.1| hypothetical
           protein AMTR_s02463p00000880, partial [Amborella
           trichopoda]
          Length = 222

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
 Frame = +1

Query: 4   NADEKISDQEQALLLLASLPKSYRPIVQTLLVGRTEITLDQAMTVLRENERMMSQVDIRS 183
           N    + ++ QA++LL SLP +Y+ +   +  GR  +TLD  +  L+  E+ MS+ +  +
Sbjct: 3   NLKHTVDEESQAVILLRSLPPAYQELKVVIKYGRDTLTLDDVLGALKSKEQEMSK-EKDN 61

Query: 184 TGDENTLA------IAXXXXXXXXXXXXXXXXXXSKSKPRDFSNIECYYCGEKGHIQSRC 345
             DE  LA                          SKS+ +   + +CY+CG+ GHI+  C
Sbjct: 62  VKDEAYLARGRDNNRGRDHYRKDHFKGQHRSQSRSKSRGKYHKDRKCYFCGKVGHIKRFC 121

Query: 346 QKMRDDLKSFKRMQ-------EKLGKVKVDDEDGSSNMVCSNSSED 462
            + ++ LK  +  +       E+  +   D ++G  + +   + +D
Sbjct: 122 IEFKNKLKEDREKKHDSASNVEESDRCSSDAKEGKDSDIAGTNRDD 167


>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
          Length = 1207

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 3/156 (1%)
 Frame = +1

Query: 16  KISDQEQALLLLASLPKSYRPIVQTLLVGRTEITLDQAMT---VLRENERMMSQVDIRST 186
           K  ++ Q L LL +LP S+     +L     +  ++  +    VL E  R  SQ      
Sbjct: 41  KFEEEVQGLWLLGTLPDSWETFRTSLFNSTPDGIMNMDLVKSCVLNEEMRRKSQ------ 94

Query: 187 GDENTLAIAXXXXXXXXXXXXXXXXXXSKSKPRDFSNIECYYCGEKGHIQSRCQKMRDDL 366
           G  +  ++                   SK+K   F+N+EC+YC  KGHI+  C++++ D+
Sbjct: 95  GSSSQSSVLVIEKRGRSKSRGPKNRDRSKNKTNKFANVECHYCHLKGHIKKYCRQLKRDM 154

Query: 367 KSFKRMQEKLGKVKVDDEDGSSNMVCSNSSEDGDVY 474
           K  K  ++K      +D  G  + V + +S+   VY
Sbjct: 155 KQGKVKEKK------NDNGGEDDQVATTTSDFFIVY 184


>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 3/156 (1%)
 Frame = +1

Query: 16  KISDQEQALLLLASLPKSYRPIVQTLLVGRTEITLDQAMT---VLRENERMMSQVDIRST 186
           K  ++ Q L LL +LP S+     +L     +  ++  +    VL E  R  SQ    S+
Sbjct: 114 KFEEEVQGLWLLGTLPDSWETFRTSLSNSAPDGIMNMDLVKSCVLNEEMRRKSQ---GSS 170

Query: 187 GDENTLAIAXXXXXXXXXXXXXXXXXXSKSKPRDFSNIECYYCGEKGHIQSRCQKMRDDL 366
              N L I                   SKSK   F+N+EC+YC  KGHI+  C++++ D+
Sbjct: 171 SQSNVLVIXKXGRSKSRGPKNRDR---SKSKTNKFANVECHYCHLKGHIKKYCRQLKRDM 227

Query: 367 KSFKRMQEKLGKVKVDDEDGSSNMVCSNSSEDGDVY 474
           K  K  ++K      +D  G  + V +  S+   VY
Sbjct: 228 KQGKVKEKK------NDNGGEDDQVATTISDFLIVY 257


>emb|CAN66743.1| hypothetical protein VITISV_043469 [Vitis vinifera]
          Length = 798

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 4/156 (2%)
 Frame = +1

Query: 1   KNADEKISDQEQALLLLASLPKS--YRPIVQTLLVGRTEITLDQAMTVLRENERMMSQVD 174
           K  D K  D+++AL+ L SLP S  Y  +V TL+ G+  + L++  + L    +     D
Sbjct: 46  KQIDVKFEDKDKALMXLNSLPVSSTYENLVTTLMWGKETLDLEEITSALLGLNQRKKAND 105

Query: 175 IRSTGDENTLAIAXXXXXXXXXXXXXXXXXXSKSKPRDFSNIECYYCGEKGHIQSRC--Q 348
             S G+   L                     S+ + +   +I+CY CG+KGH++  C  +
Sbjct: 106 ESSQGEG--LMAKRNQERERNKFRSELSNNKSRFESKKIKDIQCYKCGKKGHMKRDCPEK 163

Query: 349 KMRDDLKSFKRMQEKLGKVKVDDEDGSSNMVCSNSS 456
           K R  +   K    K G V V +ED  S   C+  S
Sbjct: 164 KKRGSVSENKEGSLKFGNV-VAEEDSESGDDCNGFS 198


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 4/163 (2%)
 Frame = +1

Query: 1   KNADEKISDQEQALLLLASLPKSYRPIVQTLLVGRTEITLDQAMTVLRENERMMSQVDIR 180
           +N D KI D++ AL+LL SLP S+   VQ+ +VG+  ++L++  + L   E +  + +  
Sbjct: 130 RNIDVKIEDEDAALILLVSLPMSFENFVQSFIVGKDTVSLEEVRSALHSRE-LRHKANGT 188

Query: 181 STGDENTLAIAXXXXXXXXXXXXXXXXXXSKSKPRDFSNIECYYCGEKGHIQSRCQKMRD 360
           ST D     +                     +KP D     C YC EKGH +  C K + 
Sbjct: 189 ST-DIQPSGLFTSSRKGRKNGGKKNKPMSKGAKPDDV----CNYCKEKGHWKFDCPKKK- 242

Query: 361 DLKSFKRMQEKLGKVKVDDEDGSSN----MVCSNSSEDGDVYL 477
                K+ +++     V +ED +S     +V    +   DV++
Sbjct: 243 -----KQSEKQSVSAAVAEEDTNSEEDIALVADEHTHHSDVWV 280


>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
          Length = 777

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
 Frame = +1

Query: 1   KNADEKISDQEQALLLLASLPKSYRPIVQTLLVGRTEITLDQAMTVLRENERMMSQVDIR 180
           ++ D K+ D+++A++LL SLPKS +   +TL  G+ +IT D     L      M   D  
Sbjct: 45  ESLDIKVEDEDKAIILLNSLPKSLKHFKETLKYGKDDITFDDVQNALNAKVLDMKSSDKT 104

Query: 181 STGDENTLAIAXXXXXXXXXXXXXXXXXXSKSK-PRDFSNIECYYCGEKGHIQSRCQKMR 357
           + G   +                      SKSK  +D+ N++CY+C + G I+  C   +
Sbjct: 105 NGGKSRS---------------------KSKSKGKKDYRNVKCYHCNKIGQIRRICPDRQ 143

Query: 358 DDLKS 372
            + K+
Sbjct: 144 QEEKT 148