BLASTX nr result

ID: Rauwolfia21_contig00027781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00027781
         (404 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34721.3| unnamed protein product [Vitis vinifera]               88   1e-15
ref|XP_002283316.1| PREDICTED: probable NOT transcription comple...    88   1e-15
ref|XP_006373270.1| hypothetical protein POPTR_0017s10470g [Popu...    86   4e-15
ref|XP_006373269.1| hypothetical protein POPTR_0017s10470g [Popu...    86   4e-15
ref|XP_002284532.2| PREDICTED: probable NOT transcription comple...    83   4e-14
emb|CBI16210.3| unnamed protein product [Vitis vinifera]               83   4e-14
gb|ESW04127.1| hypothetical protein PHAVU_011G069400g [Phaseolus...    80   3e-13
gb|ESW04126.1| hypothetical protein PHAVU_011G069400g [Phaseolus...    80   3e-13
gb|EOY34188.1| NOT2 / NOT3 / NOT5 family isoform 8 [Theobroma ca...    79   8e-13
gb|EOY34187.1| NOT2 / NOT3 / NOT5 family isoform 7, partial [The...    79   8e-13
gb|EOY34186.1| NOT2 / NOT3 / NOT5 family isoform 6 [Theobroma ca...    79   8e-13
gb|EOY34184.1| NOT2 / NOT3 / NOT5 family isoform 4 [Theobroma ca...    79   8e-13
gb|EOY34183.1| NOT2 / NOT3 / NOT5 family isoform 3 [Theobroma ca...    79   8e-13
gb|EOY34181.1| NOT2 / NOT3 / NOT5 family isoform 1 [Theobroma ca...    79   8e-13
ref|XP_002530232.1| CCR4-NOT transcription complex subunit, puta...    78   1e-12
ref|XP_006369909.1| hypothetical protein POPTR_0001s34900g [Popu...    78   1e-12
ref|XP_006369908.1| hypothetical protein POPTR_0001s34900g [Popu...    78   1e-12
ref|XP_006591002.1| PREDICTED: probable NOT transcription comple...    77   2e-12
ref|XP_006591001.1| PREDICTED: probable NOT transcription comple...    77   2e-12
ref|XP_006590998.1| PREDICTED: probable NOT transcription comple...    77   2e-12

>emb|CBI34721.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 46/73 (63%), Positives = 54/73 (73%), Gaps = 4/73 (5%)
 Frame = -3

Query: 207 DASGRALPTSFSAQSGSTAAVLNH----SGLHGIQGNYNISNMPGSFATRNSTVIGGPPG 40
           D +GR+  TSFSAQSGS AA  NH     GLH I G++NI NMPGS A+RNST+ GG PG
Sbjct: 25  DTTGRSFTTSFSAQSGSAAA-FNHLGTIQGLHNIHGSFNIPNMPGSLASRNSTINGGHPG 83

Query: 39  GIQQVTGSAASGR 1
           GIQQ TGS ++GR
Sbjct: 84  GIQQPTGSLSNGR 96


>ref|XP_002283316.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           [Vitis vinifera]
          Length = 605

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 46/73 (63%), Positives = 54/73 (73%), Gaps = 4/73 (5%)
 Frame = -3

Query: 207 DASGRALPTSFSAQSGSTAAVLNH----SGLHGIQGNYNISNMPGSFATRNSTVIGGPPG 40
           D +GR+  TSFSAQSGS AA  NH     GLH I G++NI NMPGS A+RNST+ GG PG
Sbjct: 18  DTTGRSFTTSFSAQSGSAAA-FNHLGTIQGLHNIHGSFNIPNMPGSLASRNSTINGGHPG 76

Query: 39  GIQQVTGSAASGR 1
           GIQQ TGS ++GR
Sbjct: 77  GIQQPTGSLSNGR 89


>ref|XP_006373270.1| hypothetical protein POPTR_0017s10470g [Populus trichocarpa]
           gi|550319978|gb|ERP51067.1| hypothetical protein
           POPTR_0017s10470g [Populus trichocarpa]
          Length = 666

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 39/69 (56%), Positives = 51/69 (73%)
 Frame = -3

Query: 207 DASGRALPTSFSAQSGSTAAVLNHSGLHGIQGNYNISNMPGSFATRNSTVIGGPPGGIQQ 28
           D +GR+  TSFS QSG+ + V +HSGLH I G++N+ NMPG+ A+RNSTV   P GG+QQ
Sbjct: 18  DTTGRSFATSFSGQSGAASPVFHHSGLHNIHGSFNVPNMPGTLASRNSTVNNIPSGGVQQ 77

Query: 27  VTGSAASGR 1
            TGS + GR
Sbjct: 78  PTGSLSGGR 86


>ref|XP_006373269.1| hypothetical protein POPTR_0017s10470g [Populus trichocarpa]
           gi|550319977|gb|ERP51066.1| hypothetical protein
           POPTR_0017s10470g [Populus trichocarpa]
          Length = 455

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 39/69 (56%), Positives = 51/69 (73%)
 Frame = -3

Query: 207 DASGRALPTSFSAQSGSTAAVLNHSGLHGIQGNYNISNMPGSFATRNSTVIGGPPGGIQQ 28
           D +GR+  TSFS QSG+ + V +HSGLH I G++N+ NMPG+ A+RNSTV   P GG+QQ
Sbjct: 18  DTTGRSFATSFSGQSGAASPVFHHSGLHNIHGSFNVPNMPGTLASRNSTVNNIPSGGVQQ 77

Query: 27  VTGSAASGR 1
            TGS + GR
Sbjct: 78  PTGSLSGGR 86


>ref|XP_002284532.2| PREDICTED: probable NOT transcription complex subunit VIP2-like
           [Vitis vinifera]
          Length = 666

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 39/73 (53%), Positives = 54/73 (73%), Gaps = 4/73 (5%)
 Frame = -3

Query: 207 DASGRALPTSFSAQSGSTAAVLNHSG----LHGIQGNYNISNMPGSFATRNSTVIGGPPG 40
           D++GR+  TSFSAQSG+ + V +HSG    LH I G++N+ NMPG+ A+RNST+   P G
Sbjct: 18  DSNGRSFATSFSAQSGAASPVFHHSGSIQGLHNIHGSFNVPNMPGTLASRNSTINSVPSG 77

Query: 39  GIQQVTGSAASGR 1
           G+QQ TG+ +SGR
Sbjct: 78  GVQQPTGNLSSGR 90


>emb|CBI16210.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 39/73 (53%), Positives = 54/73 (73%), Gaps = 4/73 (5%)
 Frame = -3

Query: 207 DASGRALPTSFSAQSGSTAAVLNHSG----LHGIQGNYNISNMPGSFATRNSTVIGGPPG 40
           D++GR+  TSFSAQSG+ + V +HSG    LH I G++N+ NMPG+ A+RNST+   P G
Sbjct: 18  DSNGRSFATSFSAQSGAASPVFHHSGSIQGLHNIHGSFNVPNMPGTLASRNSTINSVPSG 77

Query: 39  GIQQVTGSAASGR 1
           G+QQ TG+ +SGR
Sbjct: 78  GVQQPTGNLSSGR 90


>gb|ESW04127.1| hypothetical protein PHAVU_011G069400g [Phaseolus vulgaris]
           gi|561005134|gb|ESW04128.1| hypothetical protein
           PHAVU_011G069400g [Phaseolus vulgaris]
          Length = 658

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
 Frame = -3

Query: 207 DASGRALPTSFSAQSGSTAAVLNHSG----LHGIQGNYNISNMPGSFATRNSTVIGGPPG 40
           D +GR+  TSFS QSG+ + + +H+G    LH I G++N+ NMPGS  +RNST+   P G
Sbjct: 18  DGAGRSFATSFSGQSGAASPIFHHTGAIQGLHNIHGSFNVPNMPGSLTSRNSTINNVPSG 77

Query: 39  GIQQVTGSAASGR 1
           G+QQ TGS +SGR
Sbjct: 78  GVQQPTGSLSSGR 90


>gb|ESW04126.1| hypothetical protein PHAVU_011G069400g [Phaseolus vulgaris]
          Length = 620

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
 Frame = -3

Query: 207 DASGRALPTSFSAQSGSTAAVLNHSG----LHGIQGNYNISNMPGSFATRNSTVIGGPPG 40
           D +GR+  TSFS QSG+ + + +H+G    LH I G++N+ NMPGS  +RNST+   P G
Sbjct: 18  DGAGRSFATSFSGQSGAASPIFHHTGAIQGLHNIHGSFNVPNMPGSLTSRNSTINNVPSG 77

Query: 39  GIQQVTGSAASGR 1
           G+QQ TGS +SGR
Sbjct: 78  GVQQPTGSLSSGR 90


>gb|EOY34188.1| NOT2 / NOT3 / NOT5 family isoform 8 [Theobroma cacao]
          Length = 574

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
 Frame = -3

Query: 207 DASGRALPTSFSAQSGSTAAVLNHSG----LHGIQGNYNISNMPGSFATRNSTVIGGPPG 40
           D+SGR+  TSFS QSG+ + V +H+G    LH I G++N+ NMPG+  +RNST+   P G
Sbjct: 18  DSSGRSFATSFSGQSGAASPVFHHTGTIQGLHNIHGSFNVPNMPGTLTSRNSTLNNVPSG 77

Query: 39  GIQQVTGSAASGR 1
           G+QQ TGS + GR
Sbjct: 78  GVQQPTGSLSGGR 90


>gb|EOY34187.1| NOT2 / NOT3 / NOT5 family isoform 7, partial [Theobroma cacao]
          Length = 643

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
 Frame = -3

Query: 207 DASGRALPTSFSAQSGSTAAVLNHSG----LHGIQGNYNISNMPGSFATRNSTVIGGPPG 40
           D+SGR+  TSFS QSG+ + V +H+G    LH I G++N+ NMPG+  +RNST+   P G
Sbjct: 18  DSSGRSFATSFSGQSGAASPVFHHTGTIQGLHNIHGSFNVPNMPGTLTSRNSTLNNVPSG 77

Query: 39  GIQQVTGSAASGR 1
           G+QQ TGS + GR
Sbjct: 78  GVQQPTGSLSGGR 90


>gb|EOY34186.1| NOT2 / NOT3 / NOT5 family isoform 6 [Theobroma cacao]
          Length = 576

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
 Frame = -3

Query: 207 DASGRALPTSFSAQSGSTAAVLNHSG----LHGIQGNYNISNMPGSFATRNSTVIGGPPG 40
           D+SGR+  TSFS QSG+ + V +H+G    LH I G++N+ NMPG+  +RNST+   P G
Sbjct: 18  DSSGRSFATSFSGQSGAASPVFHHTGTIQGLHNIHGSFNVPNMPGTLTSRNSTLNNVPSG 77

Query: 39  GIQQVTGSAASGR 1
           G+QQ TGS + GR
Sbjct: 78  GVQQPTGSLSGGR 90


>gb|EOY34184.1| NOT2 / NOT3 / NOT5 family isoform 4 [Theobroma cacao]
          Length = 618

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
 Frame = -3

Query: 207 DASGRALPTSFSAQSGSTAAVLNHSG----LHGIQGNYNISNMPGSFATRNSTVIGGPPG 40
           D+SGR+  TSFS QSG+ + V +H+G    LH I G++N+ NMPG+  +RNST+   P G
Sbjct: 18  DSSGRSFATSFSGQSGAASPVFHHTGTIQGLHNIHGSFNVPNMPGTLTSRNSTLNNVPSG 77

Query: 39  GIQQVTGSAASGR 1
           G+QQ TGS + GR
Sbjct: 78  GVQQPTGSLSGGR 90


>gb|EOY34183.1| NOT2 / NOT3 / NOT5 family isoform 3 [Theobroma cacao]
          Length = 639

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
 Frame = -3

Query: 207 DASGRALPTSFSAQSGSTAAVLNHSG----LHGIQGNYNISNMPGSFATRNSTVIGGPPG 40
           D+SGR+  TSFS QSG+ + V +H+G    LH I G++N+ NMPG+  +RNST+   P G
Sbjct: 18  DSSGRSFATSFSGQSGAASPVFHHTGTIQGLHNIHGSFNVPNMPGTLTSRNSTLNNVPSG 77

Query: 39  GIQQVTGSAASGR 1
           G+QQ TGS + GR
Sbjct: 78  GVQQPTGSLSGGR 90


>gb|EOY34181.1| NOT2 / NOT3 / NOT5 family isoform 1 [Theobroma cacao]
          Length = 664

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
 Frame = -3

Query: 207 DASGRALPTSFSAQSGSTAAVLNHSG----LHGIQGNYNISNMPGSFATRNSTVIGGPPG 40
           D+SGR+  TSFS QSG+ + V +H+G    LH I G++N+ NMPG+  +RNST+   P G
Sbjct: 18  DSSGRSFATSFSGQSGAASPVFHHTGTIQGLHNIHGSFNVPNMPGTLTSRNSTLNNVPSG 77

Query: 39  GIQQVTGSAASGR 1
           G+QQ TGS + GR
Sbjct: 78  GVQQPTGSLSGGR 90


>ref|XP_002530232.1| CCR4-NOT transcription complex subunit, putative [Ricinus communis]
           gi|223530236|gb|EEF32138.1| CCR4-NOT transcription
           complex subunit, putative [Ricinus communis]
          Length = 664

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
 Frame = -3

Query: 207 DASGRALPTSFSAQSGSTAAVLNHSG----LHGIQGNYNISNMPGSFATRNSTVIGGPPG 40
           D +GR+  TSFS QSG+ + V +HSG    LH I G++N+ NMPG+  +RN+T+   P G
Sbjct: 18  DNTGRSFATSFSGQSGAASPVFHHSGTIQGLHNIHGSFNVPNMPGTLTSRNTTLNNVPSG 77

Query: 39  GIQQVTGSAASGR 1
           GIQQ TGS +SGR
Sbjct: 78  GIQQPTGSLSSGR 90


>ref|XP_006369909.1| hypothetical protein POPTR_0001s34900g [Populus trichocarpa]
           gi|550348893|gb|ERP66478.1| hypothetical protein
           POPTR_0001s34900g [Populus trichocarpa]
          Length = 446

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 40/75 (53%), Positives = 53/75 (70%), Gaps = 6/75 (8%)
 Frame = -3

Query: 207 DASGRALPTSFSAQSGSTAA-VLNHSG-----LHGIQGNYNISNMPGSFATRNSTVIGGP 46
           D + R+  TSFS QSG+ A+ V +HSG     LH I G++N+ NMPG+FA+RNST+   P
Sbjct: 18  DNTARSFATSFSGQSGAAASPVFHHSGGTIQGLHNIHGSFNVPNMPGTFASRNSTINNIP 77

Query: 45  PGGIQQVTGSAASGR 1
            GG+QQ TGS +SGR
Sbjct: 78  SGGVQQPTGSLSSGR 92


>ref|XP_006369908.1| hypothetical protein POPTR_0001s34900g [Populus trichocarpa]
           gi|550348892|gb|ERP66477.1| hypothetical protein
           POPTR_0001s34900g [Populus trichocarpa]
          Length = 664

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 40/75 (53%), Positives = 53/75 (70%), Gaps = 6/75 (8%)
 Frame = -3

Query: 207 DASGRALPTSFSAQSGSTAA-VLNHSG-----LHGIQGNYNISNMPGSFATRNSTVIGGP 46
           D + R+  TSFS QSG+ A+ V +HSG     LH I G++N+ NMPG+FA+RNST+   P
Sbjct: 18  DNTARSFATSFSGQSGAAASPVFHHSGGTIQGLHNIHGSFNVPNMPGTFASRNSTINNIP 77

Query: 45  PGGIQQVTGSAASGR 1
            GG+QQ TGS +SGR
Sbjct: 78  SGGVQQPTGSLSSGR 92


>ref|XP_006591002.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           isoform X6 [Glycine max]
          Length = 565

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
 Frame = -3

Query: 207 DASGRALPTSFSAQSGSTAAVLNHSG----LHGIQGNYNISNMPGSFATRNSTVIGGPPG 40
           D +GR+  +SFS QSG+ + + +H+G    LH I G++N+ NMPG+  +RNST+   P G
Sbjct: 18  DGAGRSFASSFSGQSGAASPIFHHTGGIQGLHNIHGSFNVPNMPGTLTSRNSTINNVPSG 77

Query: 39  GIQQVTGSAASGR 1
           G+QQ TGS +SGR
Sbjct: 78  GVQQPTGSLSSGR 90


>ref|XP_006591001.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           isoform X5 [Glycine max]
          Length = 622

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
 Frame = -3

Query: 207 DASGRALPTSFSAQSGSTAAVLNHSG----LHGIQGNYNISNMPGSFATRNSTVIGGPPG 40
           D +GR+  +SFS QSG+ + + +H+G    LH I G++N+ NMPG+  +RNST+   P G
Sbjct: 18  DGAGRSFASSFSGQSGAASPIFHHTGGIQGLHNIHGSFNVPNMPGTLTSRNSTINNVPSG 77

Query: 39  GIQQVTGSAASGR 1
           G+QQ TGS +SGR
Sbjct: 78  GVQQPTGSLSSGR 90


>ref|XP_006590998.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           isoform X2 [Glycine max]
           gi|571488682|ref|XP_006590999.1| PREDICTED: probable NOT
           transcription complex subunit VIP2-like isoform X3
           [Glycine max] gi|571488684|ref|XP_006591000.1|
           PREDICTED: probable NOT transcription complex subunit
           VIP2-like isoform X4 [Glycine max]
          Length = 660

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
 Frame = -3

Query: 207 DASGRALPTSFSAQSGSTAAVLNHSG----LHGIQGNYNISNMPGSFATRNSTVIGGPPG 40
           D +GR+  +SFS QSG+ + + +H+G    LH I G++N+ NMPG+  +RNST+   P G
Sbjct: 18  DGAGRSFASSFSGQSGAASPIFHHTGGIQGLHNIHGSFNVPNMPGTLTSRNSTINNVPSG 77

Query: 39  GIQQVTGSAASGR 1
           G+QQ TGS +SGR
Sbjct: 78  GVQQPTGSLSSGR 90


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