BLASTX nr result

ID: Rauwolfia21_contig00027498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00027498
         (330 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004296120.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]     57   2e-06
gb|AHG94963.1| mitochondrial PPR protein [Nicotiana tomentosifor...    56   6e-06
ref|XP_006366331.1| PREDICTED: putative pentatricopeptide repeat...    56   6e-06
ref|XP_004240450.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06
ref|XP_004240414.1| PREDICTED: putative pentatricopeptide repeat...    56   6e-06
ref|XP_004296297.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06
gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]     55   1e-05

>ref|XP_004296120.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Fragaria vesca subsp. vesca]
          Length = 677

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/56 (51%), Positives = 40/56 (71%)
 Frame = +3

Query: 3   PLPSVIEITQLLDRLVKLEQYSVVISLFKDMCNSRISVNEVTMSVVINSSCLIGRV 170
           PLPSVI +T++L +LVKL+ YS VI LFK M   RI+ +  T+SV+IN  C + R+
Sbjct: 138 PLPSVIPLTKILGQLVKLKHYSAVIPLFKQMLLCRIAPDACTLSVIINCYCHLSRM 193


>gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/57 (45%), Positives = 41/57 (71%)
 Frame = +3

Query: 3   PLPSVIEITQLLDRLVKLEQYSVVISLFKDMCNSRISVNEVTMSVVINSSCLIGRVE 173
           PLPSV+  ++LL  LV ++ YS V+SLF+++   RI V+E  +S+V+NS CL+ R +
Sbjct: 68  PLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTD 124


>gb|AHG94963.1| mitochondrial PPR protein [Nicotiana tomentosiformis]
          Length = 595

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/57 (42%), Positives = 40/57 (70%)
 Frame = +3

Query: 3   PLPSVIEITQLLDRLVKLEQYSVVISLFKDMCNSRISVNEVTMSVVINSSCLIGRVE 173
           PLPSV + ++L   ++ +E YS V+SLF++M    I +N+  +++VINS CL+ RV+
Sbjct: 71  PLPSVFDFSKLFKTMLNMEHYSAVVSLFREMQKLGIPINDFILNIVINSYCLMHRVD 127


>ref|XP_006366331.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Solanum tuberosum]
          Length = 588

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/57 (43%), Positives = 40/57 (70%)
 Frame = +3

Query: 3   PLPSVIEITQLLDRLVKLEQYSVVISLFKDMCNSRISVNEVTMSVVINSSCLIGRVE 173
           PLPS+++ ++L   ++ ++ YS V+SLF++M    I +NE  +S VINS CL+ RVE
Sbjct: 61  PLPSLVDFSKLFKTIIIMKHYSAVVSLFREMRKLGIPINEFILSNVINSYCLMNRVE 117


>ref|XP_004240450.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Solanum lycopersicum]
          Length = 590

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/57 (42%), Positives = 39/57 (68%)
 Frame = +3

Query: 3   PLPSVIEITQLLDRLVKLEQYSVVISLFKDMCNSRISVNEVTMSVVINSSCLIGRVE 173
           PLPSV++ ++L   ++K++ YS  ISLF+ M    I +N   +S++INS CL+ RV+
Sbjct: 66  PLPSVVDFSKLFKTMIKMKHYSAAISLFRQMLKLGIPINNFILSIMINSYCLMCRVD 122


>ref|XP_004240414.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Solanum lycopersicum]
          Length = 592

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/57 (42%), Positives = 39/57 (68%)
 Frame = +3

Query: 3   PLPSVIEITQLLDRLVKLEQYSVVISLFKDMCNSRISVNEVTMSVVINSSCLIGRVE 173
           PLPSV++ ++L   ++K++ YS  ISLF+ M    I +N   +S++INS CL+ RV+
Sbjct: 68  PLPSVVDFSKLFKTMIKMKHYSAAISLFRQMLKLGIPINNFILSIMINSYCLMCRVD 124


>ref|XP_004296297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g63130,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 697

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/57 (47%), Positives = 38/57 (66%)
 Frame = +3

Query: 3   PLPSVIEITQLLDRLVKLEQYSVVISLFKDMCNSRISVNEVTMSVVINSSCLIGRVE 173
           PLPSV+  TQ+L  LVKL+ Y+ V+SL   M  S I+ N  T+S+VIN  C + R++
Sbjct: 322 PLPSVVRFTQILAPLVKLKHYATVLSLNSQMLLSGIASNSYTLSIVINCYCCLNRLD 378


>gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/57 (43%), Positives = 40/57 (70%)
 Frame = +3

Query: 3   PLPSVIEITQLLDRLVKLEQYSVVISLFKDMCNSRISVNEVTMSVVINSSCLIGRVE 173
           PLPSV   ++LL  +V ++ YS V+SLF+++   RI V+E  +S+V+NS CL+ R +
Sbjct: 68  PLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTD 124


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