BLASTX nr result
ID: Rauwolfia21_contig00027427
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rauwolfia21_contig00027427 (330 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI36104.3| unnamed protein product [Vitis vinifera] 77 3e-12 ref|XP_002279039.1| PREDICTED: uncharacterized WD repeat-contain... 77 3e-12 ref|XP_004252499.1| PREDICTED: outer row dynein assembly protein... 69 9e-10 ref|XP_006359483.1| PREDICTED: myosin heavy chain kinase B-like ... 67 3e-09 ref|XP_004305279.1| PREDICTED: probable E3 ubiquitin ligase comp... 60 3e-07 >emb|CBI36104.3| unnamed protein product [Vitis vinifera] Length = 923 Score = 76.6 bits (187), Expect = 3e-12 Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 4/88 (4%) Frame = -3 Query: 253 SPEILSTPSFAIR--THDRQFPRSISHKEPSFPEVPCTPPRLSSNSLAAPRLY-LSQPSS 83 SP PSFAIR TH+R F RSIS KEPSF E+P TP RLSS SL++P + S PSS Sbjct: 7 SPNSPQCPSFAIRDETHNR-FLRSISTKEPSFSELPHTPSRLSSGSLSSPCHHTASLPSS 65 Query: 82 PRLSFTSPKPR-DHTDIHTIYRCISSVL 2 PR SF K + DH + T +RC+SSVL Sbjct: 66 PRHSFAPTKLKLDHDHLPTSHRCVSSVL 93 >ref|XP_002279039.1| PREDICTED: uncharacterized WD repeat-containing protein alr3466 [Vitis vinifera] Length = 427 Score = 76.6 bits (187), Expect = 3e-12 Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 4/88 (4%) Frame = -3 Query: 253 SPEILSTPSFAIR--THDRQFPRSISHKEPSFPEVPCTPPRLSSNSLAAPRLY-LSQPSS 83 SP PSFAIR TH+R F RSIS KEPSF E+P TP RLSS SL++P + S PSS Sbjct: 7 SPNSPQCPSFAIRDETHNR-FLRSISTKEPSFSELPHTPSRLSSGSLSSPCHHTASLPSS 65 Query: 82 PRLSFTSPKPR-DHTDIHTIYRCISSVL 2 PR SF K + DH + T +RC+SSVL Sbjct: 66 PRHSFAPTKLKLDHDHLPTSHRCVSSVL 93 >ref|XP_004252499.1| PREDICTED: outer row dynein assembly protein 16 homolog [Solanum lycopersicum] Length = 453 Score = 68.6 bits (166), Expect = 9e-10 Identities = 52/106 (49%), Positives = 62/106 (58%), Gaps = 16/106 (15%) Frame = -3 Query: 271 VEPADSSPEILSTPSFAIR------THDRQFPRSISHKEP-SFPE-VPCTPPRLSSNSLA 116 +EP +S S PSFAIR H+ F RSIS KEP +F E + TPPR+S+++L Sbjct: 7 LEPPNSLSS--SAPSFAIRPNNNNNNHNNSFLRSISTKEPLNFSEQLAYTPPRISTSAL- 63 Query: 115 APRLYLSQPSSPRLSFTSPKPR-------DHTDIH-TIYRCISSVL 2 P SQPS+PRLSFT P DH D H T YRCISSVL Sbjct: 64 -PSNTYSQPSTPRLSFTLNNPSTKSVDGDDHPDFHQTSYRCISSVL 108 >ref|XP_006359483.1| PREDICTED: myosin heavy chain kinase B-like [Solanum tuberosum] Length = 453 Score = 66.6 bits (161), Expect = 3e-09 Identities = 51/106 (48%), Positives = 62/106 (58%), Gaps = 16/106 (15%) Frame = -3 Query: 271 VEPADSSPEILSTPSFAIRTHDRQ-------FPRSISHKEP-SFPE-VPCTPPRLSSNSL 119 +EP +S S PSFAIR + F RS+S KEP +F E +P +PPRLS+++L Sbjct: 7 LEPPNSLSS--SAPSFAIRPDNNNNNHLNNSFLRSLSTKEPLNFSEQLPYSPPRLSTSAL 64 Query: 118 AAPRLYLSQPSSPRLSFTSPKP------RDHTDIH-TIYRCISSVL 2 P SQPS+PRLSFT P DH D H T YRCISSVL Sbjct: 65 --PSNTYSQPSTPRLSFTLNNPSTKSVDEDHPDFHQTSYRCISSVL 108 >ref|XP_004305279.1| PREDICTED: probable E3 ubiquitin ligase complex SCF subunit sconB-like [Fragaria vesca subsp. vesca] Length = 440 Score = 60.1 bits (144), Expect = 3e-07 Identities = 45/100 (45%), Positives = 54/100 (54%), Gaps = 7/100 (7%) Frame = -3 Query: 280 MASVEPADSSPEILSTPSFAIRTHD--RQFPRSISHKEPSFPEVPCTPPRLSSNSLA--- 116 MAS + + +S I TPSFA + F RSIS KEPSF + P TPPR S+N ++ Sbjct: 1 MASQDYSPNSSPI--TPSFATDQNKFFTGFTRSISTKEPSFSQFPYTPPRRSNNDVSPSF 58 Query: 115 --APRLYLSQPSSPRLSFTSPKPRDHTDIHTIYRCISSVL 2 L+ S SSPR P H D T YRCISSVL Sbjct: 59 SQTQSLHASPTSSPRFI-----PLKHPDHLTAYRCISSVL 93