BLASTX nr result

ID: Rauwolfia21_contig00027036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00027036
         (757 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB72463.1| putative virus-specific-signaling-pathway regulat...    78   4e-12
ref|XP_002298920.1| hypothetical protein POPTR_0001s38840g [Popu...    62   3e-07
ref|XP_002298919.1| hypothetical protein POPTR_0001s38830g [Popu...    57   5e-06

>gb|ACB72463.1| putative virus-specific-signaling-pathway regulated protein
           [Nicotiana tabacum]
          Length = 141

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 58/148 (39%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
 Frame = -3

Query: 551 NQENIPQIDSSIT-SFLDDSQLECCDDERLRIVIQSLEAAINPVSINDLVEDCLVFDEEK 375
           NQ  I +IDS+I  SFLD+SQ++ CDDE+LR  IQSLEA ++P+S               
Sbjct: 24  NQIEISEIDSAILMSFLDESQMKYCDDEKLRSAIQSLEAELDPIS--------------- 68

Query: 374 ILRSPESSAPEGD----DLDFSWMDMELLSPFXXXXSCDHDISWYDQVSGDELDMSYMIE 207
           ++ +P  +AP  D    D DFSWMDME+ S              Y      E     MIE
Sbjct: 69  VINNP--AAPNLDCYNGDFDFSWMDMEMSS--------------YPSPRDAE-----MIE 107

Query: 206 YAAVRDYSEI--PMEMEEHIYSSLWQET 129
           +    DYS+I   + +EE +Y SLW ET
Sbjct: 108 FQVGSDYSQIFTYIPIEEEVYDSLWLET 135


>ref|XP_002298920.1| hypothetical protein POPTR_0001s38840g [Populus trichocarpa]
           gi|222846178|gb|EEE83725.1| hypothetical protein
           POPTR_0001s38840g [Populus trichocarpa]
          Length = 166

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 10/143 (6%)
 Frame = -3

Query: 518 ITSFLDDSQLEC-CDDERLRIVIQSLEAAINPVSINDLVEDCLVFDEEKILRSPE----- 357
           + S L++SQ +   ++ERLR VIQSLEA INP  ++D  +  +  D  ++ R  E     
Sbjct: 30  LMSLLEESQGDHESNEERLRSVIQSLEAEINPSIMSDGYDTAM--DPAEMPRDGEDTDEL 87

Query: 356 --SSAPEGDDLDFSWMDMELLSPFXXXXSCDHDISWYDQVSGDELDMSYMIEYAAVRDYS 183
             ++  E   LDF  +DME++         DHD++++  +   E D   ++E+  VR+Y 
Sbjct: 88  FKTAEMESLGLDFELVDMEVV----PSSPSDHDMNYWYNMEPSEND---IVEF-GVRNYF 139

Query: 182 EIPME--MEEHIYSSLWQETCDL 120
           +   E  +EEH YSSLWQE+ D+
Sbjct: 140 QFGHEAALEEHGYSSLWQESYDI 162


>ref|XP_002298919.1| hypothetical protein POPTR_0001s38830g [Populus trichocarpa]
           gi|222846177|gb|EEE83724.1| hypothetical protein
           POPTR_0001s38830g [Populus trichocarpa]
          Length = 234

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 7/139 (5%)
 Frame = -3

Query: 518 ITSFLDDSQLECCDDERLRIVIQSLEAAINPVSINDLVEDCLVFDEEKILRSPESSAPEG 339
           + S L+++Q E  D+ERL  +IQSLEA I+P  ++          +  I ++ ++   EG
Sbjct: 95  LMSLLEETQSEDYDNERLSSLIQSLEAEIDPKRMDGGDTSMEPMMDPNICQTCDAGQVEG 154

Query: 338 D-----DLDFSWMDMELLSPFXXXXSCDHDIS-WYDQVSGDELDMSYMIEYAAVRDYSEI 177
                 DL    +DME+ SP       DHDIS WY    GD++D   M E+  +R+ S+I
Sbjct: 155 HDCWGADLTIWNIDMEMDSPTSSSDHDDHDISFWYP--IGDQMDA--MTEFGGLRNCSQI 210

Query: 176 PMEME-EHIYSSLWQETCD 123
              ++ ++    LWQE C+
Sbjct: 211 YSGVDFDNGNIDLWQEPCE 229


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