BLASTX nr result
ID: Rauwolfia21_contig00026953
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00026953
(338 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004236671.1| PREDICTED: mediator of RNA polymerase II tra... 106 4e-21
ref|XP_006346770.1| PREDICTED: mediator of RNA polymerase II tra... 104 1e-20
gb|EMJ02622.1| hypothetical protein PRUPE_ppa013517mg [Prunus pe... 103 2e-20
gb|EMJ02621.1| hypothetical protein PRUPE_ppa013516mg [Prunus pe... 103 2e-20
gb|EXB74556.1| hypothetical protein L484_026253 [Morus notabilis] 100 2e-19
ref|XP_004144648.1| PREDICTED: mediator of RNA polymerase II tra... 100 2e-19
ref|XP_006449840.1| hypothetical protein CICLE_v10017234mg [Citr... 100 3e-19
ref|XP_004290348.1| PREDICTED: mediator of RNA polymerase II tra... 97 2e-18
gb|EOY28860.1| Mediator of RNA polymerase II transcription subun... 97 3e-18
ref|XP_002269953.1| PREDICTED: uncharacterized protein LOC100255... 97 3e-18
gb|EOY19539.1| Mediator of RNA polymerase II transcription subun... 96 6e-18
gb|EOY19535.1| Mediator of RNA polymerase II transcription subun... 96 6e-18
ref|XP_004499215.1| PREDICTED: mediator of RNA polymerase II tra... 95 1e-17
ref|XP_002331576.1| predicted protein [Populus trichocarpa] 95 1e-17
ref|XP_006408503.1| hypothetical protein EUTSA_v10022365mg, part... 93 3e-17
ref|XP_003631035.1| Retinoblastoma-binding protein [Medicago tru... 93 3e-17
ref|XP_006409234.1| hypothetical protein EUTSA_v10022907mg [Eutr... 93 4e-17
ref|XP_006409233.1| hypothetical protein EUTSA_v10022907mg [Eutr... 93 4e-17
ref|XP_003631040.1| hypothetical protein MTR_8g106500 [Medicago ... 92 5e-17
ref|XP_006298843.1| hypothetical protein CARUB_v10014956mg [Caps... 92 9e-17
>ref|XP_004236671.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Solanum lycopersicum]
Length = 122
Score = 106 bits (264), Expect = 4e-21
Identities = 51/57 (89%), Positives = 55/57 (96%)
Frame = -2
Query: 172 MDTQSHNTSLQRLQNVEKRIVRVLELAGSVMDELANPSGPRKELVNSHCSEFMQLIK 2
MD+QS NTSLQRLQNVEKRIVRVLELAG VMDE+ANPSGPRKEL+N+HCSEFMQLIK
Sbjct: 1 MDSQSQNTSLQRLQNVEKRIVRVLELAGGVMDEMANPSGPRKELINNHCSEFMQLIK 57
>ref|XP_006346770.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like isoform X1 [Solanum tuberosum]
gi|565360003|ref|XP_006346771.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 11-like isoform
X2 [Solanum tuberosum] gi|565360005|ref|XP_006346772.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 11-like isoform X3 [Solanum tuberosum]
gi|565360007|ref|XP_006346773.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 11-like isoform
X4 [Solanum tuberosum]
Length = 122
Score = 104 bits (260), Expect = 1e-20
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = -2
Query: 172 MDTQSHNTSLQRLQNVEKRIVRVLELAGSVMDELANPSGPRKELVNSHCSEFMQLIK 2
MD+QS NTSLQRLQNVEKRIVRVLELAG VMDE+ANPSGPRKE +N+HCSEFMQLIK
Sbjct: 1 MDSQSQNTSLQRLQNVEKRIVRVLELAGGVMDEMANPSGPRKEFINNHCSEFMQLIK 57
>gb|EMJ02622.1| hypothetical protein PRUPE_ppa013517mg [Prunus persica]
Length = 118
Score = 103 bits (258), Expect = 2e-20
Identities = 49/60 (81%), Positives = 55/60 (91%)
Frame = -2
Query: 181 LNAMDTQSHNTSLQRLQNVEKRIVRVLELAGSVMDELANPSGPRKELVNSHCSEFMQLIK 2
+N MD+Q+ NTSLQRLQNVEKRIV+VLELAG VMDELANPSGPRKE +N+HC EFMQLIK
Sbjct: 1 MNPMDSQTQNTSLQRLQNVEKRIVKVLELAGGVMDELANPSGPRKEFINNHCREFMQLIK 60
>gb|EMJ02621.1| hypothetical protein PRUPE_ppa013516mg [Prunus persica]
Length = 118
Score = 103 bits (258), Expect = 2e-20
Identities = 49/60 (81%), Positives = 55/60 (91%)
Frame = -2
Query: 181 LNAMDTQSHNTSLQRLQNVEKRIVRVLELAGSVMDELANPSGPRKELVNSHCSEFMQLIK 2
+N MD+Q+ NTSLQRLQNVEKRIV+VLELAG VMDELANPSGPRKE +N+HC EFMQLIK
Sbjct: 1 MNPMDSQTQNTSLQRLQNVEKRIVKVLELAGGVMDELANPSGPRKEFINNHCREFMQLIK 60
>gb|EXB74556.1| hypothetical protein L484_026253 [Morus notabilis]
Length = 115
Score = 100 bits (249), Expect = 2e-19
Identities = 48/57 (84%), Positives = 53/57 (92%)
Frame = -2
Query: 172 MDTQSHNTSLQRLQNVEKRIVRVLELAGSVMDELANPSGPRKELVNSHCSEFMQLIK 2
MD+Q+ NTSLQRLQNVEKRIVRVLELAG VMDEL+NP+GPRKE VN+HC EFMQLIK
Sbjct: 1 MDSQTQNTSLQRLQNVEKRIVRVLELAGGVMDELSNPAGPRKEFVNNHCREFMQLIK 57
>ref|XP_004144648.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Cucumis sativus]
gi|449504225|ref|XP_004162288.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 11-like [Cucumis
sativus]
Length = 118
Score = 100 bits (249), Expect = 2e-19
Identities = 48/57 (84%), Positives = 52/57 (91%)
Frame = -2
Query: 172 MDTQSHNTSLQRLQNVEKRIVRVLELAGSVMDELANPSGPRKELVNSHCSEFMQLIK 2
MD +HNTSLQRLQNVEKRIVRVLELAG VM+ELANP+GPRKE VN+HCSEFMQ IK
Sbjct: 1 MDPPAHNTSLQRLQNVEKRIVRVLELAGGVMEELANPAGPRKEFVNNHCSEFMQFIK 57
>ref|XP_006449840.1| hypothetical protein CICLE_v10017234mg [Citrus clementina]
gi|567915055|ref|XP_006449841.1| hypothetical protein
CICLE_v10017234mg [Citrus clementina]
gi|568825973|ref|XP_006467350.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 11-like [Citrus
sinensis] gi|557552451|gb|ESR63080.1| hypothetical
protein CICLE_v10017234mg [Citrus clementina]
gi|557552452|gb|ESR63081.1| hypothetical protein
CICLE_v10017234mg [Citrus clementina]
Length = 115
Score = 99.8 bits (247), Expect = 3e-19
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = -2
Query: 172 MDTQSHNTSLQRLQNVEKRIVRVLELAGSVMDELANPSGPRKELVNSHCSEFMQLIK 2
MD+QS TSLQRLQNVEKR+VRVLELAG VMDELANP GPRKE++N+HC EFMQLIK
Sbjct: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIK 57
>ref|XP_004290348.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Fragaria vesca subsp. vesca]
Length = 171
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/61 (77%), Positives = 56/61 (91%)
Frame = -2
Query: 184 RLNAMDTQSHNTSLQRLQNVEKRIVRVLELAGSVMDELANPSGPRKELVNSHCSEFMQLI 5
+L +MD+Q+ NTSLQRLQNVEKRIV+VLELAGSVMDELANP+GPR+E +N+H EFMQLI
Sbjct: 53 QLFSMDSQTQNTSLQRLQNVEKRIVKVLELAGSVMDELANPTGPRRESINNHVREFMQLI 112
Query: 4 K 2
K
Sbjct: 113 K 113
>gb|EOY28860.1| Mediator of RNA polymerase II transcription subunit 11 [Theobroma
cacao]
Length = 121
Score = 96.7 bits (239), Expect = 3e-18
Identities = 45/57 (78%), Positives = 52/57 (91%)
Frame = -2
Query: 172 MDTQSHNTSLQRLQNVEKRIVRVLELAGSVMDELANPSGPRKELVNSHCSEFMQLIK 2
MD+ + NTSLQRLQNVEKRIVRVLELAG VMDELANP+GPRKE +N+HC EFM++IK
Sbjct: 1 MDSPTQNTSLQRLQNVEKRIVRVLELAGGVMDELANPTGPRKEFINNHCREFMKMIK 57
>ref|XP_002269953.1| PREDICTED: uncharacterized protein LOC100255926 [Vitis vinifera]
gi|297734129|emb|CBI15376.3| unnamed protein product
[Vitis vinifera]
Length = 115
Score = 96.7 bits (239), Expect = 3e-18
Identities = 46/57 (80%), Positives = 52/57 (91%)
Frame = -2
Query: 172 MDTQSHNTSLQRLQNVEKRIVRVLELAGSVMDELANPSGPRKELVNSHCSEFMQLIK 2
MD+Q+ NTSLQRLQNVEKRI++VLELAG VMDEL NPSGPRKEL++ HC EFMQLIK
Sbjct: 1 MDSQTPNTSLQRLQNVEKRIIKVLELAGGVMDELCNPSGPRKELLSIHCGEFMQLIK 57
>gb|EOY19539.1| Mediator of RNA polymerase II transcription subunit 11 [Theobroma
cacao]
Length = 117
Score = 95.5 bits (236), Expect = 6e-18
Identities = 44/57 (77%), Positives = 52/57 (91%)
Frame = -2
Query: 172 MDTQSHNTSLQRLQNVEKRIVRVLELAGSVMDELANPSGPRKELVNSHCSEFMQLIK 2
MD+ + NTSLQRLQNVEKRIVRVL+LAG VMDELANP+GPRKE +N+HC EFM++IK
Sbjct: 1 MDSPAQNTSLQRLQNVEKRIVRVLDLAGGVMDELANPTGPRKEFINNHCREFMKMIK 57
>gb|EOY19535.1| Mediator of RNA polymerase II transcription subunit 11 [Theobroma
cacao]
Length = 305
Score = 95.5 bits (236), Expect = 6e-18
Identities = 44/57 (77%), Positives = 52/57 (91%)
Frame = -2
Query: 172 MDTQSHNTSLQRLQNVEKRIVRVLELAGSVMDELANPSGPRKELVNSHCSEFMQLIK 2
MD+ + NTSLQRLQNVEKRIVRVL+LAG VMDELANP+GPRKE +N+HC EFM++IK
Sbjct: 1 MDSPAQNTSLQRLQNVEKRIVRVLDLAGGVMDELANPTGPRKEFINNHCREFMKMIK 57
>ref|XP_004499215.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like isoform X1 [Cicer arietinum]
Length = 115
Score = 94.7 bits (234), Expect = 1e-17
Identities = 47/57 (82%), Positives = 50/57 (87%)
Frame = -2
Query: 172 MDTQSHNTSLQRLQNVEKRIVRVLELAGSVMDELANPSGPRKELVNSHCSEFMQLIK 2
MD+QS TSLQRLQNVEKRIV+VLELAG VMDELA P GPRK+LV SHC EFMQLIK
Sbjct: 1 MDSQSQTTSLQRLQNVEKRIVKVLELAGGVMDELARPVGPRKDLVQSHCLEFMQLIK 57
>ref|XP_002331576.1| predicted protein [Populus trichocarpa]
Length = 129
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/57 (73%), Positives = 53/57 (92%)
Frame = -2
Query: 172 MDTQSHNTSLQRLQNVEKRIVRVLELAGSVMDELANPSGPRKELVNSHCSEFMQLIK 2
MD+Q+ NTSLQRLQNVEK +VRVLE+AG+VMDEL+NP+GPRKE +N+HC +FMQ+IK
Sbjct: 1 MDSQTQNTSLQRLQNVEKTVVRVLEVAGAVMDELSNPTGPRKEFINNHCRDFMQMIK 57
>ref|XP_006408503.1| hypothetical protein EUTSA_v10022365mg, partial [Eutrema
salsugineum] gi|557109649|gb|ESQ49956.1| hypothetical
protein EUTSA_v10022365mg, partial [Eutrema salsugineum]
Length = 185
Score = 93.2 bits (230), Expect = 3e-17
Identities = 43/57 (75%), Positives = 51/57 (89%)
Frame = -2
Query: 172 MDTQSHNTSLQRLQNVEKRIVRVLELAGSVMDELANPSGPRKELVNSHCSEFMQLIK 2
MD Q+ NTSLQRLQNVE+R+VRVL++AG VMDELA+PSGP+KE VNSHC EFMQ +K
Sbjct: 71 MDPQTQNTSLQRLQNVERRVVRVLDIAGGVMDELASPSGPKKEFVNSHCREFMQSMK 127
>ref|XP_003631035.1| Retinoblastoma-binding protein [Medicago truncatula]
gi|355525057|gb|AET05511.1| Retinoblastoma-binding
protein [Medicago truncatula]
Length = 311
Score = 93.2 bits (230), Expect = 3e-17
Identities = 58/111 (52%), Positives = 72/111 (64%), Gaps = 7/111 (6%)
Frame = -2
Query: 313 TNLIKRRIPLRRKPLAPSGVNRNR*RYSG-----EPKRIILTTEDSS*RLNA--MDTQSH 155
T+++ RR+P R P P V + + EP+ L + +S A MD+Q
Sbjct: 68 TSVLIRRVPGR--PCLPI-VTEKKQEFENKVVETEPENSTLPADYTSSIFEATSMDSQGQ 124
Query: 154 NTSLQRLQNVEKRIVRVLELAGSVMDELANPSGPRKELVNSHCSEFMQLIK 2
TSLQRLQNVEKRIV+VLELAG VMDELA+P GPRK+LV +HC EFMQLIK
Sbjct: 125 TTSLQRLQNVEKRIVKVLELAGGVMDELASPVGPRKDLVQNHCLEFMQLIK 175
>ref|XP_006409234.1| hypothetical protein EUTSA_v10022907mg [Eutrema salsugineum]
gi|557110396|gb|ESQ50687.1| hypothetical protein
EUTSA_v10022907mg [Eutrema salsugineum]
Length = 130
Score = 92.8 bits (229), Expect = 4e-17
Identities = 42/57 (73%), Positives = 51/57 (89%)
Frame = -2
Query: 172 MDTQSHNTSLQRLQNVEKRIVRVLELAGSVMDELANPSGPRKELVNSHCSEFMQLIK 2
MD Q+ NTSLQRLQNVE+R+VRVL++AG VMDELA+PSGP+KE +NSHC EFMQ +K
Sbjct: 1 MDPQTQNTSLQRLQNVERRVVRVLDIAGGVMDELASPSGPKKEFINSHCREFMQSMK 57
>ref|XP_006409233.1| hypothetical protein EUTSA_v10022907mg [Eutrema salsugineum]
gi|557110395|gb|ESQ50686.1| hypothetical protein
EUTSA_v10022907mg [Eutrema salsugineum]
Length = 115
Score = 92.8 bits (229), Expect = 4e-17
Identities = 42/57 (73%), Positives = 51/57 (89%)
Frame = -2
Query: 172 MDTQSHNTSLQRLQNVEKRIVRVLELAGSVMDELANPSGPRKELVNSHCSEFMQLIK 2
MD Q+ NTSLQRLQNVE+R+VRVL++AG VMDELA+PSGP+KE +NSHC EFMQ +K
Sbjct: 1 MDPQTQNTSLQRLQNVERRVVRVLDIAGGVMDELASPSGPKKEFINSHCREFMQSMK 57
>ref|XP_003631040.1| hypothetical protein MTR_8g106500 [Medicago truncatula]
gi|355525062|gb|AET05516.1| hypothetical protein
MTR_8g106500 [Medicago truncatula]
Length = 91
Score = 92.4 bits (228), Expect = 5e-17
Identities = 45/57 (78%), Positives = 50/57 (87%)
Frame = -2
Query: 172 MDTQSHNTSLQRLQNVEKRIVRVLELAGSVMDELANPSGPRKELVNSHCSEFMQLIK 2
MD+Q TSLQRLQNVEKRIV+VLELAG VMDELA+P GPRK+LV +HC EFMQLIK
Sbjct: 1 MDSQGQTTSLQRLQNVEKRIVKVLELAGGVMDELASPVGPRKDLVQNHCLEFMQLIK 57
>ref|XP_006298843.1| hypothetical protein CARUB_v10014956mg [Capsella rubella]
gi|482567552|gb|EOA31741.1| hypothetical protein
CARUB_v10014956mg [Capsella rubella]
Length = 115
Score = 91.7 bits (226), Expect = 9e-17
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = -2
Query: 172 MDTQSHNTSLQRLQNVEKRIVRVLELAGSVMDELANPSGPRKELVNSHCSEFMQLIK 2
MD Q+ NTSLQRLQNVE R+V+VLELAG VM+ELA+PSGP+KE VNSHC EFMQ +K
Sbjct: 1 MDPQTQNTSLQRLQNVENRVVKVLELAGGVMEELASPSGPKKEFVNSHCREFMQSMK 57