BLASTX nr result

ID: Rauwolfia21_contig00026825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00026825
         (573 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19320.3| unnamed protein product [Vitis vinifera]               67   3e-09
ref|XP_002283625.1| PREDICTED: probable beta-1,4-xylosyltransfer...    67   3e-09
ref|XP_004299836.1| PREDICTED: probable beta-1,4-xylosyltransfer...    63   5e-08
ref|XP_004165066.1| PREDICTED: LOW QUALITY PROTEIN: probable bet...    63   6e-08
ref|XP_004136238.1| PREDICTED: probable beta-1,4-xylosyltransfer...    63   6e-08
gb|EMJ23925.1| hypothetical protein PRUPE_ppa006476mg [Prunus pe...    59   1e-06

>emb|CBI19320.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 40/68 (58%), Positives = 45/68 (66%), Gaps = 8/68 (11%)
 Frame = -2

Query: 194 MASIRRTLSP-YQDRSYQNGGNPFSVQSPTYK----GKVPSPL---SALDFGVRRFLAGV 39
           MASIRRT SP Y DR YQNGG  FSV SP+ K    GK  SPL   S+   G+RRF+AG 
Sbjct: 1   MASIRRTQSPAYHDRPYQNGGTSFSVSSPSQKLLSNGKCSSPLPFFSSYGVGIRRFVAGA 60

Query: 38  FVQKNPRK 15
           F+QK  RK
Sbjct: 61  FLQKYSRK 68


>ref|XP_002283625.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX9H-like [Vitis
           vinifera]
          Length = 405

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 40/68 (58%), Positives = 45/68 (66%), Gaps = 8/68 (11%)
 Frame = -2

Query: 194 MASIRRTLSP-YQDRSYQNGGNPFSVQSPTYK----GKVPSPL---SALDFGVRRFLAGV 39
           MASIRRT SP Y DR YQNGG  FSV SP+ K    GK  SPL   S+   G+RRF+AG 
Sbjct: 1   MASIRRTQSPAYHDRPYQNGGTSFSVSSPSQKLLSNGKCSSPLPFFSSYGVGIRRFVAGA 60

Query: 38  FVQKNPRK 15
           F+QK  RK
Sbjct: 61  FLQKYSRK 68


>ref|XP_004299836.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX9H-like
           [Fragaria vesca subsp. vesca]
          Length = 450

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 37/72 (51%), Positives = 45/72 (62%), Gaps = 11/72 (15%)
 Frame = -2

Query: 194 MASIRRTLSP-YQDRSYQNGGNPFSVQSPTYK----------GKVPSPLSALDFGVRRFL 48
           MASIRRTLSP ++DR Y NGG+PFSVQSP+ +            + S   A    VRRFL
Sbjct: 1   MASIRRTLSPKFRDRPYLNGGSPFSVQSPSSQKSFSSSKYSSSPLVSAFIAFAVAVRRFL 60

Query: 47  AGVFVQKNPRKG 12
           AG  +Q+ PRKG
Sbjct: 61  AGALLQRAPRKG 72


>ref|XP_004165066.1| PREDICTED: LOW QUALITY PROTEIN: probable
           beta-1,4-xylosyltransferase IRX9H-like [Cucumis sativus]
          Length = 407

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 38/69 (55%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
 Frame = -2

Query: 194 MASIRRTLSP-YQDRSYQNGGNPFSVQSPTYK----GKVPSPLSALDFGVRRFLAGVFVQ 30
           MASIRRTLSP Y DR Y NG  PFS  SP+ K     K  SP S+   G RRF++G F  
Sbjct: 1   MASIRRTLSPAYHDRVYPNG-IPFSTSSPSSKLLSNAKYSSPFSSFAVGARRFISGAFFI 59

Query: 29  KNPRKGVNS 3
           + PRKG NS
Sbjct: 60  RPPRKGSNS 68


>ref|XP_004136238.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX9H-like [Cucumis
           sativus]
          Length = 415

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 38/69 (55%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
 Frame = -2

Query: 194 MASIRRTLSP-YQDRSYQNGGNPFSVQSPTYK----GKVPSPLSALDFGVRRFLAGVFVQ 30
           MASIRRTLSP Y DR Y NG  PFS  SP+ K     K  SP S+   G RRF++G F  
Sbjct: 1   MASIRRTLSPAYHDRVYPNG-IPFSTSSPSSKLLSNAKYSSPFSSFAVGARRFISGAFFI 59

Query: 29  KNPRKGVNS 3
           + PRKG NS
Sbjct: 60  RPPRKGSNS 68


>gb|EMJ23925.1| hypothetical protein PRUPE_ppa006476mg [Prunus persica]
          Length = 410

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 10/71 (14%)
 Frame = -2

Query: 194 MASIRRTLSP-YQDRSYQNG-GNPFSVQSPT--------YKGKVPSPLSALDFGVRRFLA 45
           MASIRRTLSP ++DR Y NG G+PFSVQSP+        Y    PS + A    +RRF+A
Sbjct: 1   MASIRRTLSPAFRDRPYVNGVGSPFSVQSPSPKLLSSSRYSPPFPSAILAFTVTIRRFVA 60

Query: 44  GVFVQKNPRKG 12
           GV   +  RKG
Sbjct: 61  GVLFHRPNRKG 71


Top