BLASTX nr result

ID: Rauwolfia21_contig00026808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00026808
         (311 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004235384.1| PREDICTED: long chain base biosynthesis prot...    70   3e-10
emb|CAP16702.1| putative serine palmitoyltransferase subunit LCB...    70   3e-10
dbj|BAG68298.1| serine palmitoyltransferase [Nicotiana benthamiana]    70   3e-10
dbj|BAE96963.1| serine palmitpoyltransferase subunit2 [Nicotiana...    70   3e-10
ref|XP_006364387.1| PREDICTED: long chain base biosynthesis prot...    69   6e-10
emb|CAB44316.1| serine palmitoyltransferase [Solanum tuberosum]        69   6e-10
ref|XP_006645277.1| PREDICTED: long chain base biosynthesis prot...    68   1e-09
ref|XP_006347368.1| PREDICTED: long chain base biosynthesis prot...    67   2e-09
ref|XP_004241473.1| PREDICTED: long chain base biosynthesis prot...    67   2e-09
ref|NP_190447.1| serine palmitoyltransferase 1 [Arabidopsis thal...    67   3e-09
gb|EMJ11162.1| hypothetical protein PRUPE_ppa004890mg [Prunus pe...    67   3e-09
ref|XP_002875925.1| hypothetical protein ARALYDRAFT_485232 [Arab...    67   3e-09
ref|XP_003634228.1| PREDICTED: serine palmitoyltransferase 2 iso...    67   3e-09
ref|XP_002284409.1| PREDICTED: serine palmitoyltransferase 2 iso...    67   3e-09
sp|Q8RYL1.1|LCB2B_ORYSJ RecName: Full=Long chain base biosynthes...    67   3e-09
ref|XP_006290987.1| hypothetical protein CARUB_v10017101mg [Caps...    66   4e-09
ref|XP_004304557.1| PREDICTED: long chain base biosynthesis prot...    66   4e-09
ref|XP_006287613.1| hypothetical protein CARUB_v10000825mg [Caps...    66   5e-09
ref|NP_197756.1| serine palmitoyltransferase subunit LCB2 [Arabi...    66   5e-09
dbj|BAB03231.1| serine palmitoyltransferase [Arabidopsis thaliana]     66   5e-09

>ref|XP_004235384.1| PREDICTED: long chain base biosynthesis protein 2b-like [Solanum
           lycopersicum]
          Length = 489

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 32/49 (65%), Positives = 37/49 (75%)
 Frame = -2

Query: 310 FGRPISSPPDAWFDVVERVSNDNNKTLKCVTSTHQNTNLDCFSFVSFLA 164
           FGRPI SPPDAWFDVVERVSNDNNKTLK  T   +  NL  ++++ F A
Sbjct: 67  FGRPICSPPDAWFDVVERVSNDNNKTLKRTTQVSRCLNLGSYNYLGFAA 115


>emb|CAP16702.1| putative serine palmitoyltransferase subunit LCB2, partial
           [Nicotiana benthamiana]
          Length = 356

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 32/49 (65%), Positives = 37/49 (75%)
 Frame = -2

Query: 310 FGRPISSPPDAWFDVVERVSNDNNKTLKCVTSTHQNTNLDCFSFVSFLA 164
           FGRPI SPPDAWFDVVERVSNDNNKTLK  T   +  NL  ++++ F A
Sbjct: 56  FGRPICSPPDAWFDVVERVSNDNNKTLKRTTKVSRCLNLGSYNYLGFAA 104


>dbj|BAG68298.1| serine palmitoyltransferase [Nicotiana benthamiana]
          Length = 489

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 32/49 (65%), Positives = 37/49 (75%)
 Frame = -2

Query: 310 FGRPISSPPDAWFDVVERVSNDNNKTLKCVTSTHQNTNLDCFSFVSFLA 164
           FGRPI SPPDAWFDVVERVSNDNNKTLK  T   +  NL  ++++ F A
Sbjct: 67  FGRPICSPPDAWFDVVERVSNDNNKTLKRTTKVSRCLNLGSYNYLGFAA 115


>dbj|BAE96963.1| serine palmitpoyltransferase subunit2 [Nicotiana tabacum]
           gi|159506876|gb|ABW97709.1| serine palmitoyltransferase
           long chain base subunit [Nicotiana benthamiana]
          Length = 489

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 32/49 (65%), Positives = 37/49 (75%)
 Frame = -2

Query: 310 FGRPISSPPDAWFDVVERVSNDNNKTLKCVTSTHQNTNLDCFSFVSFLA 164
           FGRPI SPPDAWFDVVERVSNDNNKTLK  T   +  NL  ++++ F A
Sbjct: 67  FGRPICSPPDAWFDVVERVSNDNNKTLKRTTKVSRCLNLGSYNYLGFAA 115


>ref|XP_006364387.1| PREDICTED: long chain base biosynthesis protein 2b-like [Solanum
           tuberosum]
          Length = 489

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 31/49 (63%), Positives = 37/49 (75%)
 Frame = -2

Query: 310 FGRPISSPPDAWFDVVERVSNDNNKTLKCVTSTHQNTNLDCFSFVSFLA 164
           FGRPI SPPDAWFDVVER+SNDNNKTLK  T   +  NL  ++++ F A
Sbjct: 67  FGRPICSPPDAWFDVVERLSNDNNKTLKRTTKVSRCLNLGSYNYLGFAA 115


>emb|CAB44316.1| serine palmitoyltransferase [Solanum tuberosum]
          Length = 489

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 31/49 (63%), Positives = 37/49 (75%)
 Frame = -2

Query: 310 FGRPISSPPDAWFDVVERVSNDNNKTLKCVTSTHQNTNLDCFSFVSFLA 164
           FGRPI SPPDAWFDVVER+SNDNNKTLK  T   +  NL  ++++ F A
Sbjct: 67  FGRPICSPPDAWFDVVERLSNDNNKTLKRTTKVSRCLNLGSYNYLGFAA 115


>ref|XP_006645277.1| PREDICTED: long chain base biosynthesis protein 2d-like [Oryza
           brachyantha]
          Length = 489

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 30/49 (61%), Positives = 37/49 (75%)
 Frame = -2

Query: 310 FGRPISSPPDAWFDVVERVSNDNNKTLKCVTSTHQNTNLDCFSFVSFLA 164
           FGRPI+S PDAWFDVVER SND+NKTL C T T +  NL  ++++ F A
Sbjct: 67  FGRPIASAPDAWFDVVERYSNDSNKTLHCTTKTSKCLNLGSYNYLGFAA 115


>ref|XP_006347368.1| PREDICTED: long chain base biosynthesis protein 2a-like isoform X1
           [Solanum tuberosum] gi|565361249|ref|XP_006347369.1|
           PREDICTED: long chain base biosynthesis protein 2a-like
           isoform X2 [Solanum tuberosum]
          Length = 489

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/47 (63%), Positives = 35/47 (74%)
 Frame = -2

Query: 310 FGRPISSPPDAWFDVVERVSNDNNKTLKCVTSTHQNTNLDCFSFVSF 170
           FGRPI SPPDAWFDVVERVSNDNNKTL   T   +  NL  ++++ F
Sbjct: 67  FGRPICSPPDAWFDVVERVSNDNNKTLNRTTKVSRCLNLGSYNYLGF 113


>ref|XP_004241473.1| PREDICTED: long chain base biosynthesis protein 2a-like [Solanum
           lycopersicum]
          Length = 489

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/47 (63%), Positives = 35/47 (74%)
 Frame = -2

Query: 310 FGRPISSPPDAWFDVVERVSNDNNKTLKCVTSTHQNTNLDCFSFVSF 170
           FGRPI SPPDAWFDVVERVSNDNNKTL   T   +  NL  ++++ F
Sbjct: 67  FGRPICSPPDAWFDVVERVSNDNNKTLNRTTKVSRCLNLGSYNYLGF 113


>ref|NP_190447.1| serine palmitoyltransferase 1 [Arabidopsis thaliana]
           gi|75183447|sp|Q9M304.1|LCB2B_ARATH RecName: Full=Long
           chain base biosynthesis protein 2b; Short=AtLCB2b;
           AltName: Full=Serine palmitoyltransferase 1;
           Short=AtSPT1 gi|7576216|emb|CAB87906.1| serine
           palmitoyltransferase-like protein [Arabidopsis thaliana]
           gi|15450818|gb|AAK96680.1| serine
           palmitoyltransferase-like protein [Arabidopsis thaliana]
           gi|16649025|gb|AAL24364.1| serine
           palmitoyltransferase-like protein [Arabidopsis thaliana]
           gi|17221603|dbj|BAB78461.1| serine palmitoyltransferase
           [Arabidopsis thaliana] gi|21387155|gb|AAM47981.1| serine
           palmitoyltransferase-like protein [Arabidopsis thaliana]
           gi|30387587|gb|AAP31959.1| At3g48780 [Arabidopsis
           thaliana] gi|332644934|gb|AEE78455.1| serine
           palmitoyltransferase 1 [Arabidopsis thaliana]
          Length = 489

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/50 (62%), Positives = 38/50 (76%)
 Frame = -2

Query: 310 FGRPISSPPDAWFDVVERVSNDNNKTLKCVTSTHQNTNLDCFSFVSFLAF 161
           FGRPISS PDAW DVVERVS+DNNKTLK  T T +  NL  ++++ F +F
Sbjct: 67  FGRPISSAPDAWIDVVERVSDDNNKTLKRTTKTSRCLNLGSYNYLGFGSF 116


>gb|EMJ11162.1| hypothetical protein PRUPE_ppa004890mg [Prunus persica]
          Length = 487

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/49 (63%), Positives = 36/49 (73%)
 Frame = -2

Query: 310 FGRPISSPPDAWFDVVERVSNDNNKTLKCVTSTHQNTNLDCFSFVSFLA 164
           FGRPISS PDAWFDVVER SNDNNKTLK  T   +  NL  ++++ F A
Sbjct: 67  FGRPISSAPDAWFDVVERYSNDNNKTLKRTTKISRCLNLGSYNYLGFAA 115


>ref|XP_002875925.1| hypothetical protein ARALYDRAFT_485232 [Arabidopsis lyrata subsp.
           lyrata] gi|297321763|gb|EFH52184.1| hypothetical protein
           ARALYDRAFT_485232 [Arabidopsis lyrata subsp. lyrata]
          Length = 489

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/50 (62%), Positives = 38/50 (76%)
 Frame = -2

Query: 310 FGRPISSPPDAWFDVVERVSNDNNKTLKCVTSTHQNTNLDCFSFVSFLAF 161
           FGRPISS PDAW DVVERVS+DNNKTLK  T T +  NL  ++++ F +F
Sbjct: 67  FGRPISSAPDAWIDVVERVSDDNNKTLKRTTKTSRCLNLGSYNYLGFGSF 116


>ref|XP_003634228.1| PREDICTED: serine palmitoyltransferase 2 isoform 2 [Vitis vinifera]
           gi|297734488|emb|CBI15735.3| unnamed protein product
           [Vitis vinifera]
          Length = 513

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/49 (63%), Positives = 36/49 (73%)
 Frame = -2

Query: 310 FGRPISSPPDAWFDVVERVSNDNNKTLKCVTSTHQNTNLDCFSFVSFLA 164
           FGRPISS PDAWFDVVER SNDNNKTLK  T   +  NL  ++++ F A
Sbjct: 67  FGRPISSAPDAWFDVVERFSNDNNKTLKRTTKISKCLNLGSYNYLGFAA 115


>ref|XP_002284409.1| PREDICTED: serine palmitoyltransferase 2 isoform 1 [Vitis vinifera]
          Length = 489

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/49 (63%), Positives = 36/49 (73%)
 Frame = -2

Query: 310 FGRPISSPPDAWFDVVERVSNDNNKTLKCVTSTHQNTNLDCFSFVSFLA 164
           FGRPISS PDAWFDVVER SNDNNKTLK  T   +  NL  ++++ F A
Sbjct: 67  FGRPISSAPDAWFDVVERFSNDNNKTLKRTTKISKCLNLGSYNYLGFAA 115


>sp|Q8RYL1.1|LCB2B_ORYSJ RecName: Full=Long chain base biosynthesis protein 2b
           gi|20161837|dbj|BAB90751.1| putative serine
           palmitoyltransferase [Oryza sativa Japonica Group]
           gi|125573194|gb|EAZ14709.1| hypothetical protein
           OsJ_04633 [Oryza sativa Japonica Group]
           gi|215768705|dbj|BAH00934.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 499

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 30/49 (61%), Positives = 36/49 (73%)
 Frame = -2

Query: 310 FGRPISSPPDAWFDVVERVSNDNNKTLKCVTSTHQNTNLDCFSFVSFLA 164
           FGRPI+S PDAWFDVVER S D+NKTL C T T +  NL  F+++ F A
Sbjct: 78  FGRPIASKPDAWFDVVERYSTDSNKTLHCTTKTSKCLNLASFNYLGFAA 126


>ref|XP_006290987.1| hypothetical protein CARUB_v10017101mg [Capsella rubella]
           gi|482559694|gb|EOA23885.1| hypothetical protein
           CARUB_v10017101mg [Capsella rubella]
          Length = 489

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 31/50 (62%), Positives = 38/50 (76%)
 Frame = -2

Query: 310 FGRPISSPPDAWFDVVERVSNDNNKTLKCVTSTHQNTNLDCFSFVSFLAF 161
           FGRPISS PDAW DVVERVS+DNNKTLK  T T +  NL  ++++ F +F
Sbjct: 67  FGRPISSAPDAWVDVVERVSDDNNKTLKRTTKTSRCLNLGSYNYLGFGSF 116


>ref|XP_004304557.1| PREDICTED: long chain base biosynthesis protein 2a-like [Fragaria
           vesca subsp. vesca]
          Length = 489

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 33/62 (53%), Positives = 40/62 (64%)
 Frame = -2

Query: 310 FGRPISSPPDAWFDVVERVSNDNNKTLKCVTSTHQNTNLDCFSFVSFLAFTINFVSSTVK 131
           F RPISS PDAWFDVVER SND NKTLK  +ST +  NL  ++++ F A         +K
Sbjct: 67  FNRPISSAPDAWFDVVERYSNDYNKTLKLTSSTSRCLNLGSYNYLGFAAADEYCTPRAIK 126

Query: 130 TL 125
           TL
Sbjct: 127 TL 128


>ref|XP_006287613.1| hypothetical protein CARUB_v10000825mg [Capsella rubella]
           gi|482556319|gb|EOA20511.1| hypothetical protein
           CARUB_v10000825mg [Capsella rubella]
          Length = 489

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 31/50 (62%), Positives = 37/50 (74%)
 Frame = -2

Query: 310 FGRPISSPPDAWFDVVERVSNDNNKTLKCVTSTHQNTNLDCFSFVSFLAF 161
           F RPISS PDAWFDVVER SNDNNKTLK  T T +  NL  ++++ F +F
Sbjct: 67  FERPISSAPDAWFDVVERYSNDNNKTLKRTTKTSRCLNLGSYNYLGFGSF 116


>ref|NP_197756.1| serine palmitoyltransferase subunit LCB2 [Arabidopsis thaliana]
           gi|79328575|ref|NP_001031932.1| serine
           palmitoyltransferase subunit LCB2 [Arabidopsis thaliana]
           gi|75180412|sp|Q9LSZ9.1|LCB2A_ARATH RecName: Full=Long
           chain base biosynthesis protein 2a; Short=AtLCB2a;
           AltName: Full=Long chain base biosynthesis protein 2;
           Short=AtLCB2 gi|8809693|dbj|BAA97234.1| serine
           palmitoyltransferase [Arabidopsis thaliana]
           gi|15292791|gb|AAK92764.1| putative serine
           palmitoyltransferase [Arabidopsis thaliana]
           gi|22136834|gb|AAM91761.1| putative serine
           palmitoyltransferase [Arabidopsis thaliana]
           gi|332005813|gb|AED93196.1| serine palmitoyltransferase
           subunit LCB2 [Arabidopsis thaliana]
           gi|332005814|gb|AED93197.1| serine palmitoyltransferase
           subunit LCB2 [Arabidopsis thaliana]
          Length = 489

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 31/50 (62%), Positives = 37/50 (74%)
 Frame = -2

Query: 310 FGRPISSPPDAWFDVVERVSNDNNKTLKCVTSTHQNTNLDCFSFVSFLAF 161
           F RPISS PDAWFDVVER SNDNNKTLK  T T +  NL  ++++ F +F
Sbjct: 67  FERPISSAPDAWFDVVERYSNDNNKTLKRTTKTSRCLNLGSYNYLGFGSF 116


>dbj|BAB03231.1| serine palmitoyltransferase [Arabidopsis thaliana]
          Length = 489

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 31/50 (62%), Positives = 37/50 (74%)
 Frame = -2

Query: 310 FGRPISSPPDAWFDVVERVSNDNNKTLKCVTSTHQNTNLDCFSFVSFLAF 161
           F RPISS PDAWFDVVER SNDNNKTLK  T T +  NL  ++++ F +F
Sbjct: 67  FERPISSAPDAWFDVVERYSNDNNKTLKRTTKTSRCLNLGSYNYLGFGSF 116


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