BLASTX nr result
ID: Rauwolfia21_contig00026371
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00026371
(434 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004485929.1| PREDICTED: pentatricopeptide repeat-containi... 102 9e-31
gb|EOY32495.1| Tetratricopeptide repeat-like superfamily protein... 92 2e-30
emb|CAN84022.1| hypothetical protein VITISV_004991 [Vitis vinifera] 89 5e-30
ref|XP_004296342.1| PREDICTED: pentatricopeptide repeat-containi... 100 7e-30
gb|ESW05019.1| hypothetical protein PHAVU_011G144900g [Phaseolus... 95 1e-27
ref|XP_006574778.1| PREDICTED: pentatricopeptide repeat-containi... 92 2e-27
ref|XP_004238610.1| PREDICTED: pentatricopeptide repeat-containi... 80 9e-19
gb|EXB28972.1| hypothetical protein L484_018388 [Morus notabilis] 98 1e-18
gb|EOY14874.1| Pentatricopeptide repeat (PPR-like) superfamily p... 72 1e-18
ref|NP_173402.2| pentatricopeptide repeat-containing protein [Ar... 77 3e-18
dbj|BAF01011.1| DYW7 protein [Arabidopsis thaliana] 77 3e-18
ref|XP_006341986.1| PREDICTED: pentatricopeptide repeat-containi... 77 6e-18
gb|EMJ08483.1| hypothetical protein PRUPE_ppa016807m2g, partial ... 95 8e-18
ref|XP_002299253.1| hypothetical protein POPTR_0001s05260g [Popu... 95 8e-18
ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arab... 76 9e-18
ref|XP_006306414.1| hypothetical protein CARUB_v10012347mg [Caps... 75 9e-18
ref|XP_006357663.1| PREDICTED: pentatricopeptide repeat-containi... 95 1e-17
ref|XP_002510452.1| pentatricopeptide repeat-containing protein,... 71 3e-17
gb|EXB97347.1| hypothetical protein L484_024210 [Morus notabilis] 71 3e-17
ref|XP_006386200.1| pentatricopeptide repeat-containing family p... 65 3e-17
>ref|XP_004485929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cicer arietinum]
Length = 548
Score = 102 bits (255), Expect(2) = 9e-31
Identities = 44/75 (58%), Positives = 61/75 (81%)
Frame = +1
Query: 82 IESYLGLMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDV 261
+++ +GLMDVNKG+EVH+MIY++G+ +VSIGN +IDMY KC ++ A +VF++M RDV
Sbjct: 120 LKTCVGLMDVNKGREVHAMIYEMGFQNDVSIGNGLIDMYCKCGSISYACRVFEEMPERDV 179
Query: 262 TSWTSMICGYSNAGD 306
SWTSMICG+ N GD
Sbjct: 180 ASWTSMICGFCNVGD 194
Score = 56.6 bits (135), Expect(2) = 9e-31
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAF 427
G IE++ +LFE+MK EGL+PN FTWN +IA YAR GD AF
Sbjct: 193 GDIEQALVLFERMKLEGLEPNDFTWNAIIAMYARLGDSKKAF 234
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 33/83 (39%), Positives = 47/83 (56%)
Frame = +1
Query: 55 SKQVYFFHFIESYLGLMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKV 234
S QV + + + V G+E+H I + G+D V I +A+IDMYSKC +L A V
Sbjct: 282 SNQVTIAALLPACGSVGSVKWGREIHGFICRKGFDANVFIASALIDMYSKCGSLNNARNV 341
Query: 235 FDKMVNRDVTSWTSMICGYSNAG 303
FDK+ ++V SW +MI Y G
Sbjct: 342 FDKISCKNVASWNAMIDCYGKCG 364
Score = 35.0 bits (79), Expect(2) = 1e-12
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCD 418
GM++ S LF KM++EGL+PN T+ +++ + G +
Sbjct: 364 GMVDSSMELFTKMQEEGLQPNEVTFTCILSACSHSGSVE 402
>gb|EOY32495.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 529
Score = 91.7 bits (226), Expect(2) = 2e-30
Identities = 40/75 (53%), Positives = 59/75 (78%)
Frame = +1
Query: 82 IESYLGLMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDV 261
+++ +GLMD++KGKEVH+++ K+ + +VS+GN +IDMY KC N+ A KVF+++V RDV
Sbjct: 122 LKACVGLMDLDKGKEVHAVVNKLCLESDVSVGNGLIDMYCKCGNVGYARKVFERIVERDV 181
Query: 262 TSWTSMICGYSNAGD 306
SWTSMI GY N G+
Sbjct: 182 ASWTSMISGYFNVGN 196
Score = 66.2 bits (160), Expect(2) = 2e-30
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
G E + +LFE+MK EGL+PN FTWNVMIAG+ARRGD +AAF L
Sbjct: 195 GNSENALVLFERMKLEGLQPNEFTWNVMIAGFARRGDINAAFAL 238
Score = 65.9 bits (159), Expect(2) = 8e-12
Identities = 29/65 (44%), Positives = 45/65 (69%)
Frame = +1
Query: 109 VNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSMICG 288
V KG+E+H +IY++G D+ V I +A+IDMYSKC ++ A VFD + +++V SW ++I
Sbjct: 302 VQKGREIHGLIYRLGLDVNVFITSALIDMYSKCGSVKDARNVFDNIPSKNVASWNALIGC 361
Query: 289 YSNAG 303
Y G
Sbjct: 362 YGKHG 366
Score = 29.6 bits (65), Expect(2) = 8e-12
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRG 409
GM+E + LFE+M++EGL+ N T +++ + G
Sbjct: 366 GMVESAIELFERMREEGLQANDTTLASVLSACSHSG 401
>emb|CAN84022.1| hypothetical protein VITISV_004991 [Vitis vinifera]
Length = 566
Score = 89.0 bits (219), Expect(2) = 5e-30
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = +1
Query: 82 IESYLGLMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDV 261
++ +GLMD NKGKEVH +I + G VS+ N+ IDMY KC ++ KVFD M+ RDV
Sbjct: 133 LKQCVGLMDFNKGKEVHCVISRTGLGNVVSVANSXIDMYCKCGHVGYGRKVFDGMIERDV 192
Query: 262 TSWTSMICGYSNAG 303
SWTSMICGY N G
Sbjct: 193 VSWTSMICGYCNIG 206
Score = 67.8 bits (164), Expect(2) = 5e-30
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
G +EE+ +LFE+MK EGL+PN FTWN MIAGYAR GDC+ AF L
Sbjct: 206 GTLEEALVLFERMKVEGLEPNDFTWNXMIAGYARDGDCNGAFVL 249
Score = 64.3 bits (155), Expect(2) = 2e-11
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +1
Query: 97 GLM-DVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWT 273
GLM +++GKE+H +IY++G DM V + A+ID YSKC + A VFD++ ++V SW
Sbjct: 308 GLMGSIHRGKELHGLIYRMGXDMNVFVATALIDXYSKCGTVKDAWDVFDRIPIKNVASWN 367
Query: 274 SMICGYSNAG 303
+MI Y G
Sbjct: 368 AMIGCYGKHG 377
Score = 29.6 bits (65), Expect(2) = 2e-11
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFT 373
G+++ S LFE+M+ EG++ NH T
Sbjct: 377 GLVDSSIQLFERMQAEGMQANHIT 400
>ref|XP_004296342.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Fragaria vesca subsp. vesca]
Length = 528
Score = 100 bits (249), Expect(2) = 7e-30
Identities = 41/70 (58%), Positives = 57/70 (81%)
Frame = +1
Query: 94 LGLMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWT 273
+GLMD+NKGKEVH+++YK+G++ +V++GN ++DMY KC +L +VFD+M RDV SWT
Sbjct: 124 VGLMDLNKGKEVHAVVYKMGFEKDVALGNTLVDMYCKCGSLCYGHRVFDRMHERDVASWT 183
Query: 274 SMICGYSNAG 303
SMICGY N G
Sbjct: 184 SMICGYCNVG 193
Score = 55.8 bits (133), Expect(2) = 7e-30
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
G ++ +LFE+MK EGL+PN FTWN +IAGYAR GD + + L
Sbjct: 193 GRTDQGAMLFERMKLEGLEPNDFTWNAVIAGYARSGDSNRVYVL 236
Score = 62.4 bits (150), Expect(2) = 7e-09
Identities = 27/65 (41%), Positives = 43/65 (66%)
Frame = +1
Query: 109 VNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSMICG 288
V +G+E+H +I+++G+D+ V + +A+IDMYSKC ++ A VFD +V SW +MI
Sbjct: 300 VERGREIHGLIFRMGFDINVFVASALIDMYSKCGSVKNARSVFDWTPVNNVASWNAMIGC 359
Query: 289 YSNAG 303
Y G
Sbjct: 360 YGKHG 364
Score = 23.1 bits (48), Expect(2) = 7e-09
Identities = 8/39 (20%), Positives = 23/39 (58%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCD 418
G+++ + LF++M++EG++ T +++ + G +
Sbjct: 364 GLVDSAVELFDRMQEEGVQATVVTLTSVLSACSHSGSVE 402
>gb|ESW05019.1| hypothetical protein PHAVU_011G144900g [Phaseolus vulgaris]
Length = 555
Score = 94.7 bits (234), Expect(2) = 1e-27
Identities = 40/75 (53%), Positives = 57/75 (76%)
Frame = +1
Query: 82 IESYLGLMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDV 261
+++ +GLMDVNKG++VH+M+ ++G+ +VS+ NA+IDMY KC + A VFD M RDV
Sbjct: 123 LKACVGLMDVNKGRQVHAMVCEMGFQSDVSVANALIDMYGKCGGISYAHSVFDGMHERDV 182
Query: 262 TSWTSMICGYSNAGD 306
SWTSMICG+ N G+
Sbjct: 183 ASWTSMICGFCNVGE 197
Score = 53.9 bits (128), Expect(2) = 1e-27
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAA 424
G IE++ +LFE+M+ EGL+PN FTWNV+IA YAR D A
Sbjct: 196 GEIEQALMLFERMRLEGLEPNDFTWNVIIAAYARSSDSSKA 236
Score = 62.8 bits (151), Expect(2) = 4e-12
Identities = 29/62 (46%), Positives = 40/62 (64%)
Frame = +1
Query: 118 GKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSMICGYSN 297
G+E+H + + G+D V I +A+IDMYSKC +L A VFDKM ++V SW +MI Y
Sbjct: 306 GREIHGFVCRKGFDANVFIASALIDMYSKCGSLKDAQNVFDKMPFKNVASWNAMIGCYGK 365
Query: 298 AG 303
G
Sbjct: 366 YG 367
Score = 33.9 bits (76), Expect(2) = 4e-12
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRG 409
GM++ S LF++M++EGL+PN T+ +++ + G
Sbjct: 367 GMVDSSLELFKRMQEEGLQPNEVTFTCILSACSHSG 402
>ref|XP_006574778.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Glycine max]
Length = 604
Score = 92.0 bits (227), Expect(2) = 2e-27
Identities = 38/75 (50%), Positives = 58/75 (77%)
Frame = +1
Query: 82 IESYLGLMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDV 261
+++ +GLMDVN G++VH+M+ ++G+ +VS+ NA+IDMY KC ++ A ++FD M RDV
Sbjct: 120 LKACVGLMDVNMGRQVHAMVCEMGFQNDVSVANALIDMYGKCGSISYARRLFDGMRERDV 179
Query: 262 TSWTSMICGYSNAGD 306
SWTSMICG+ N G+
Sbjct: 180 ASWTSMICGFCNVGE 194
Score = 56.2 bits (134), Expect(2) = 2e-27
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFG 430
G IE++ +LFE+M+ EGL+PN FTWN +IA YAR D AFG
Sbjct: 193 GEIEQALMLFERMRLEGLEPNDFTWNAIIAAYARSSDSRKAFG 235
Score = 60.5 bits (145), Expect(2) = 1e-11
Identities = 29/65 (44%), Positives = 41/65 (63%)
Frame = +1
Query: 109 VNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSMICG 288
V G+E+H I + G+D V I +A+IDMYSKC ++ A VFDK+ ++V SW +MI
Sbjct: 300 VKWGREIHGFICRKGFDGNVFIASALIDMYSKCGSVKDARNVFDKIPCKNVASWNAMIDC 359
Query: 289 YSNAG 303
Y G
Sbjct: 360 YGKCG 364
Score = 34.7 bits (78), Expect(2) = 1e-11
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRG 409
GM++ + LF KM++EGL+PN T+ +++ + G
Sbjct: 364 GMVDSALALFNKMQEEGLRPNEVTFTCVLSACSHSG 399
>ref|XP_004238610.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Solanum lycopersicum]
Length = 884
Score = 79.7 bits (195), Expect(2) = 9e-19
Identities = 35/74 (47%), Positives = 51/74 (68%)
Frame = +1
Query: 82 IESYLGLMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDV 261
+ + L D+ KGKE+HS++ K+G+D V +GNA++D+YSKC L A +VFD + +DV
Sbjct: 353 VSACASLKDLRKGKELHSLVVKLGFDGGVIVGNALVDLYSKCGKLEAARQVFDMIPEKDV 412
Query: 262 TSWTSMICGYSNAG 303
SW S+I GY AG
Sbjct: 413 YSWNSLIGGYCQAG 426
Score = 39.3 bits (90), Expect(2) = 9e-19
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
G +++ LF KM + + PN TWNV+I G+ + GD D A L
Sbjct: 426 GCCGKAYDLFMKMHEFAVSPNVITWNVLITGHMQNGDEDQALDL 469
Score = 58.9 bits (141), Expect(2) = 6e-12
Identities = 25/67 (37%), Positives = 39/67 (58%)
Frame = +1
Query: 106 DVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSMIC 285
DV G +HS+ + G E+ + N+++ +Y+KC L A ++F+ M RD SW SMI
Sbjct: 190 DVETGMLIHSIAIRCGMSSEIRVNNSLLAVYAKCGLLGCAKRIFESMEMRDTVSWNSMIM 249
Query: 286 GYSNAGD 306
Y + GD
Sbjct: 250 AYCHKGD 256
Score = 37.0 bits (84), Expect(2) = 6e-12
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 299 QGMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAA 424
+G I + L M EG++P TWN++IA Y + G CD A
Sbjct: 254 KGDIVVARRLLNLMPLEGVEPGLITWNILIASYNQLGRCDEA 295
Score = 56.6 bits (135), Expect(2) = 1e-09
Identities = 24/64 (37%), Positives = 38/64 (59%)
Frame = +1
Query: 100 LMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSM 279
L+ K KE+H + + + E+SI N++ID YSK L + +FD M +D+ SW ++
Sbjct: 531 LIGAKKVKEIHCCVLRCNLENELSIANSLIDTYSKSGGLQYSKTIFDVMSTKDIISWNTL 590
Query: 280 ICGY 291
I GY
Sbjct: 591 IAGY 594
Score = 31.6 bits (70), Expect(2) = 1e-09
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 293 LMQGMIEESHILFEKMKQEGLKPNHFTWNVMIAGY 397
++ G ES LF +M++ GLKPN T++ +I Y
Sbjct: 595 VLHGFSSESTKLFHQMEEAGLKPNRGTFSSVILSY 629
>gb|EXB28972.1| hypothetical protein L484_018388 [Morus notabilis]
Length = 529
Score = 98.2 bits (243), Expect = 1e-18
Identities = 41/74 (55%), Positives = 58/74 (78%)
Frame = +1
Query: 82 IESYLGLMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDV 261
+++ LGLMDV KGKEVH+++ K+G++ + ++GNA+IDMY KC + A KVFD+M RD+
Sbjct: 118 LKACLGLMDVKKGKEVHAVVTKMGFESDAAVGNALIDMYCKCERMCHARKVFDRMAKRDI 177
Query: 262 TSWTSMICGYSNAG 303
WTSMICGY +AG
Sbjct: 178 ACWTSMICGYFSAG 191
Score = 59.7 bits (143), Expect(2) = 7e-10
Identities = 24/65 (36%), Positives = 42/65 (64%)
Frame = +1
Query: 109 VNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSMICG 288
+ G+++H +IY++G D+ + +A++DMYSKC N+ A VFD++ ++V W +MI
Sbjct: 298 IQTGRQIHGLIYRMGLDINSFVASALVDMYSKCGNIENACTVFDRVRVKNVVLWNAMIGC 357
Query: 289 YSNAG 303
Y G
Sbjct: 358 YGKHG 362
Score = 29.3 bits (64), Expect(2) = 7e-10
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRG 409
GMI+ S LFE+M +EG++ N T+ +++ + G
Sbjct: 362 GMIDSSLQLFERMHEEGMQANGVTFVCVLSACSHSG 397
>gb|EOY14874.1| Pentatricopeptide repeat (PPR-like) superfamily protein isoform 1
[Theobroma cacao] gi|508722978|gb|EOY14875.1|
Pentatricopeptide repeat (PPR-like) superfamily protein
isoform 1 [Theobroma cacao]
Length = 890
Score = 72.0 bits (175), Expect(2) = 1e-18
Identities = 33/74 (44%), Positives = 47/74 (63%)
Frame = +1
Query: 82 IESYLGLMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDV 261
+ + L +N G+E+HS+ K G V +GN++IDMY+KC L A +VFDK+ RDV
Sbjct: 357 VSACASLRVLNMGREIHSIALKKGIIDNVLVGNSLIDMYAKCGELEAARQVFDKIEERDV 416
Query: 262 TSWTSMICGYSNAG 303
+W SM+ GY AG
Sbjct: 417 YTWNSMVAGYCQAG 430
Score = 46.2 bits (108), Expect(2) = 1e-18
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
G +++ LF KM++ LKPN TWN MI+GY + GD D A L
Sbjct: 430 GYCGKAYELFMKMRESDLKPNVITWNTMISGYIQNGDEDRAMDL 473
Score = 58.5 bits (140), Expect(2) = 3e-13
Identities = 24/83 (28%), Positives = 47/83 (56%)
Frame = +1
Query: 61 QVYFFHFIESYLGLMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFD 240
++ F F+++ DV G+ +HS++ ++G + N+++ +Y+KC L A + F+
Sbjct: 179 EILFPKFLQACANCGDVRTGRLLHSLVIRLGMVCFARVSNSVLAVYAKCGKLSSARRFFE 238
Query: 241 KMVNRDVTSWTSMICGYSNAGDD 309
M RD+ +W SMI Y G++
Sbjct: 239 NMNERDIVTWNSMILAYCQKGEN 261
Score = 41.6 bits (96), Expect(2) = 3e-13
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 299 QGMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
+G +E++ LF M ++G++P TWN++I Y + G CD A GL
Sbjct: 258 KGENDEAYGLFYGMWKDGIQPCLVTWNILINSYNQLGQCDVAMGL 302
Score = 55.1 bits (131), Expect(2) = 2e-07
Identities = 26/79 (32%), Positives = 41/79 (51%)
Frame = +1
Query: 55 SKQVYFFHFIESYLGLMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKV 234
S V + L+ K KE+H + + + +SI N++ID Y+K N+ + +
Sbjct: 520 SNSVTILSILPGCANLVAAKKVKEIHGCVLRRNLEFVLSISNSLIDTYAKSGNILYSRII 579
Query: 235 FDKMVNRDVTSWTSMICGY 291
FD M RD+ SW S+I GY
Sbjct: 580 FDGMSTRDIISWNSIIGGY 598
Score = 25.4 bits (54), Expect(2) = 2e-07
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 293 LMQGMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCD 418
++ G + + LF +M++ GLKPN T+ +I + G D
Sbjct: 599 VLHGCSDAALDLFNQMRKLGLKPNRGTFLSIILAHGIAGMVD 640
>ref|NP_173402.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75263158|sp|Q9FXH1.1|PPR52_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g19720; AltName: Full=Protein DYW7
gi|10086495|gb|AAG12555.1|AC007797_15 Unknown Protein
[Arabidopsis thaliana] gi|332191770|gb|AEE29891.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 894
Score = 76.6 bits (187), Expect(2) = 3e-18
Identities = 34/65 (52%), Positives = 47/65 (72%)
Frame = +1
Query: 109 VNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSMICG 288
+N+G EVHS+ K+G+ +V +GN+++DMYSKC L A KVFD + N+DV +W SMI G
Sbjct: 368 INQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITG 427
Query: 289 YSNAG 303
Y AG
Sbjct: 428 YCQAG 432
Score = 40.8 bits (94), Expect(2) = 3e-18
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
G +++ LF +M+ L+PN TWN MI+GY + GD A L
Sbjct: 432 GYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDL 475
Score = 57.4 bits (137), Expect(2) = 4e-14
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +1
Query: 106 DVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSMIC 285
DV GK +HS++ K+G + + N+I+ +Y+KC L A+K F +M RDV +W S++
Sbjct: 196 DVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLL 255
Query: 286 GYSNAG 303
Y G
Sbjct: 256 AYCQNG 261
Score = 45.8 bits (107), Expect(2) = 4e-14
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
G EE+ L ++M++EG+ P TWN++I GY + G CDAA L
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDL 304
>dbj|BAF01011.1| DYW7 protein [Arabidopsis thaliana]
Length = 328
Score = 76.6 bits (187), Expect(2) = 3e-18
Identities = 34/65 (52%), Positives = 47/65 (72%)
Frame = +1
Query: 109 VNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSMICG 288
+N+G EVHS+ K+G+ +V +GN+++DMYSKC L A KVFD + N+DV +W SMI G
Sbjct: 197 INQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITG 256
Query: 289 YSNAG 303
Y AG
Sbjct: 257 YCQAG 261
Score = 40.8 bits (94), Expect(2) = 3e-18
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
G +++ LF +M+ L+PN TWN MI+GY + GD A L
Sbjct: 261 GYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDL 304
Score = 57.4 bits (137), Expect(2) = 4e-14
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +1
Query: 106 DVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSMIC 285
DV GK +HS++ K+G + + N+I+ +Y+KC L A+K F +M RDV +W S++
Sbjct: 25 DVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLL 84
Query: 286 GYSNAG 303
Y G
Sbjct: 85 AYCQNG 90
Score = 45.8 bits (107), Expect(2) = 4e-14
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
G EE+ L ++M++EG+ P TWN++I GY + G CDAA L
Sbjct: 90 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDL 133
>ref|XP_006341986.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Solanum tuberosum]
Length = 884
Score = 77.4 bits (189), Expect(2) = 6e-18
Identities = 34/74 (45%), Positives = 50/74 (67%)
Frame = +1
Query: 82 IESYLGLMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDV 261
+ + L D+ KG+E+HS++ K+G+D V +GNA++D+YSKC L A VFD + +DV
Sbjct: 353 VSACASLKDLRKGRELHSLVVKLGFDGGVIVGNALVDLYSKCGKLEAARLVFDMIPEKDV 412
Query: 262 TSWTSMICGYSNAG 303
SW S+I GY AG
Sbjct: 413 YSWNSLIGGYCQAG 426
Score = 38.9 bits (89), Expect(2) = 6e-18
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
G +++ LF KM + + PN TWNV+I G+ + GD D A L
Sbjct: 426 GCCGKAYDLFMKMHEFDVSPNVITWNVLITGHMQNGDEDQALDL 469
Score = 53.1 bits (126), Expect(2) = 2e-11
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +1
Query: 106 DVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSMIC 285
DV G +HS+ + G E+ + N+++ +Y+KC L A ++F+ RD SW S+I
Sbjct: 190 DVETGILIHSIAIRCGMISEIRVNNSLLAVYAKCGLLDCAKRIFESTEMRDTVSWNSIIM 249
Query: 286 GYSNAGD 306
Y + GD
Sbjct: 250 AYCHKGD 256
Score = 40.8 bits (94), Expect(2) = 2e-11
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +2
Query: 299 QGMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAA 424
+G I E+ L M+ EG++P TWN++IA Y + G CD A
Sbjct: 254 KGDIVEARRLLNLMRLEGVEPGLITWNILIASYNQLGRCDEA 295
Score = 56.6 bits (135), Expect(2) = 5e-10
Identities = 24/64 (37%), Positives = 38/64 (59%)
Frame = +1
Query: 100 LMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSM 279
L+ K KE+H + + + E+SI N++ID YSK L + +FD M +D+ SW ++
Sbjct: 531 LIGAKKVKEIHCCVLRCNLENELSIANSLIDTYSKSGGLQYSKTIFDGMSTKDIISWNTL 590
Query: 280 ICGY 291
I GY
Sbjct: 591 IAGY 594
Score = 32.7 bits (73), Expect(2) = 5e-10
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 293 LMQGMIEESHILFEKMKQEGLKPNHFTWNVMIAGY 397
++ G E+ LF +M++ GLKPN T++ MI+ Y
Sbjct: 595 VLHGFSSEATKLFHQMEEAGLKPNRGTFSSMISSY 629
>gb|EMJ08483.1| hypothetical protein PRUPE_ppa016807m2g, partial [Prunus persica]
Length = 330
Score = 95.1 bits (235), Expect = 8e-18
Identities = 41/68 (60%), Positives = 57/68 (83%)
Frame = +1
Query: 94 LGLMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWT 273
+GLMD+NKGKEVH+++ K+G+ +VS+ NA+IDMY KC ++ A +VFD+M++RDV SWT
Sbjct: 89 VGLMDLNKGKEVHAVVNKLGFAKDVSLANALIDMYCKCGSVCHAHRVFDRMLDRDVASWT 148
Query: 274 SMICGYSN 297
SMICGY N
Sbjct: 149 SMICGYFN 156
Score = 65.5 bits (158), Expect = 7e-09
Identities = 26/65 (40%), Positives = 44/65 (67%)
Frame = +1
Query: 109 VNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSMICG 288
+ +G+E+H +IY++G+D+ V + +A+IDMYSKC ++ A VFD++ V SW ++I
Sbjct: 265 IRRGREIHGLIYRIGFDINVFVASALIDMYSKCGSVEKARSVFDRIPVNHVASWNALIGC 324
Query: 289 YSNAG 303
Y G
Sbjct: 325 YGKYG 329
Score = 58.2 bits (139), Expect = 1e-06
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 8/151 (5%)
Frame = +2
Query: 5 EETIRYFSLFPESRCYSPNKYTFSILLNLILV*WM*TRGRK-----SIL*FIKWVMIWRC 169
+E IRYF L E NK+TF ++L + + +G++ + L F K V +
Sbjct: 60 DEAIRYFYLMQELGVVG-NKFTFPVMLKVCVGLMDLNKGKEVHAVVNKLGFAKDVSLANA 118
Query: 170 LLVML*L---ICIASVETCTSLVRCLIKWLTEMLHHGRP*YVDTLMQGMIEESHILFEKM 340
L+ M +C A L R + W + + + +++ +LFE+M
Sbjct: 119 LIDMYCKCGSVCHAHRVFDRMLDRDVASWTSMICGY--------FNVAKTDQALLLFERM 170
Query: 341 KQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
K + L+PN+FTWN MIAG+AR GD + A+ L
Sbjct: 171 KLDELEPNYFTWNAMIAGFARCGDTERAYAL 201
>ref|XP_002299253.1| hypothetical protein POPTR_0001s05260g [Populus trichocarpa]
gi|222846511|gb|EEE84058.1| hypothetical protein
POPTR_0001s05260g [Populus trichocarpa]
Length = 599
Score = 95.1 bits (235), Expect = 8e-18
Identities = 39/74 (52%), Positives = 58/74 (78%)
Frame = +1
Query: 82 IESYLGLMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDV 261
+++++GL+D+NKGKEVHSM+ ++G++ +V + NA++DMYSKC + A VFD+M RD+
Sbjct: 133 LKAFVGLLDLNKGKEVHSMVKQLGFESDVCVANALVDMYSKCGCIGYARTVFDRMAKRDI 192
Query: 262 TSWTSMICGYSNAG 303
SWTSMI GY N G
Sbjct: 193 VSWTSMISGYCNVG 206
Score = 71.2 bits (173), Expect = 1e-10
Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Frame = +2
Query: 5 EETIRYFSLFPESRCYSPNKYTFSILLNLILV*WM*TRGRK-----SIL*FIKWVMIWRC 169
+E I YF +S + NKYTFSI+L + +G++ L F V +
Sbjct: 108 KEAIGYFCSMKDS-VFIYNKYTFSIVLKAFVGLLDLNKGKEVHSMVKQLGFESDVCVANA 166
Query: 170 LLVML*LI-CIASVETCTSLV--RCLIKWLTEMLHHGRP*YVDTLMQGMIEESHILFEKM 340
L+ M CI T + R ++ W T M+ Y + G IEE+ +LFE+M
Sbjct: 167 LVDMYSKCGCIGYARTVFDRMAKRDIVSW-TSMISG----YCNV---GKIEEALVLFERM 218
Query: 341 KQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
K EGL+PN FTWN +I+GYARRGD D AF L
Sbjct: 219 KLEGLEPNDFTWNALISGYARRGDSDGAFSL 249
Score = 55.8 bits (133), Expect(2) = 9e-08
Identities = 24/66 (36%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +1
Query: 109 VNKGKEVHSMIYKVGYDMEVS-IGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSMIC 285
+ +G+ +H ++Y++ +D+ + I +A+IDMYS+C + A VF+K+ N++V SW +MI
Sbjct: 313 IQRGRAIHGLVYRLEFDISNAFIASALIDMYSECGSFKEARTVFEKIHNKNVASWNAMIG 372
Query: 286 GYSNAG 303
Y G
Sbjct: 373 CYGKHG 378
Score = 25.8 bits (55), Expect(2) = 9e-08
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMI-----AGYARRG 409
GM+ S LFE+M EG++ N T ++ +GY +G
Sbjct: 378 GMVNTSIQLFERMHGEGIQANDVTLLCVLSACSHSGYVEKG 418
>ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
lyrata] gi|297338906|gb|EFH69323.1| hypothetical protein
ARALYDRAFT_472198 [Arabidopsis lyrata subsp. lyrata]
Length = 1490
Score = 75.9 bits (185), Expect(2) = 9e-18
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = +1
Query: 88 SYLGLMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTS 267
SYL + +N G EVHS+ K+G+ +V +GN+++DMYSKC L A KVFD + N+DV +
Sbjct: 363 SYLKV--INLGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYT 420
Query: 268 WTSMICGYSNAG 303
W SMI GY AG
Sbjct: 421 WNSMITGYCQAG 432
Score = 39.7 bits (91), Expect(2) = 9e-18
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
G +++ LF +M+ ++PN TWN MI+GY + GD A L
Sbjct: 432 GYCGKAYELFTRMQDANVRPNIITWNTMISGYIKNGDEGEAMDL 475
Score = 55.5 bits (132), Expect(2) = 5e-14
Identities = 24/66 (36%), Positives = 39/66 (59%)
Frame = +1
Query: 106 DVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSMIC 285
DV GK +HS++ K+G + + N+I+ +Y+KC A+K F +M RDV +W S++
Sbjct: 196 DVETGKLIHSVVIKLGMSSCLRVSNSILAVYAKCGEWDFATKFFRRMKERDVVAWNSVLL 255
Query: 286 GYSNAG 303
Y G
Sbjct: 256 AYCQNG 261
Score = 47.4 bits (111), Expect(2) = 5e-14
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
G EE+ L E+M++EG+ P TWN++I GY + G CDAA L
Sbjct: 261 GKHEEAVELVEEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDL 304
>ref|XP_006306414.1| hypothetical protein CARUB_v10012347mg [Capsella rubella]
gi|482575125|gb|EOA39312.1| hypothetical protein
CARUB_v10012347mg [Capsella rubella]
Length = 1361
Score = 74.7 bits (182), Expect(2) = 9e-18
Identities = 34/65 (52%), Positives = 46/65 (70%)
Frame = +1
Query: 109 VNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSMICG 288
+N G EVHS+ K+G+ +V +GN+++DMYSKC L A KVFD + N+DV +W SMI G
Sbjct: 368 LNLGSEVHSVAVKMGFIDDVLVGNSLVDMYSKCGELEDARKVFDSVKNKDVYTWNSMITG 427
Query: 289 YSNAG 303
Y AG
Sbjct: 428 YCQAG 432
Score = 40.8 bits (94), Expect(2) = 9e-18
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
G +++ LF KM+ ++PN TWN MI+GY + GD A L
Sbjct: 432 GYCGKAYELFTKMQDANVRPNIITWNTMISGYIKNGDEGEAMDL 475
Score = 57.4 bits (137), Expect(2) = 2e-13
Identities = 25/66 (37%), Positives = 41/66 (62%)
Frame = +1
Query: 106 DVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSMIC 285
DV GK +HS++ K+G + + N+I+ +Y+KC +L A+K F +M RDV +W S++
Sbjct: 196 DVETGKLIHSVVIKLGMSSCLRVSNSILAVYAKCGDLDSATKFFRRMKERDVVAWNSVLL 255
Query: 286 GYSNAG 303
Y G
Sbjct: 256 AYCQNG 261
Score = 43.5 bits (101), Expect(2) = 2e-13
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
G EE+ L E+M++EG+ P TWN++I GY + G C+ A L
Sbjct: 261 GKHEEAVRLVEEMEKEGIAPGLVTWNILIGGYNQLGKCEDAMNL 304
>ref|XP_006357663.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like isoform X1 [Solanum tuberosum]
gi|565382687|ref|XP_006357664.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g59600-like isoform X2 [Solanum tuberosum]
Length = 529
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/74 (56%), Positives = 57/74 (77%)
Frame = +1
Query: 82 IESYLGLMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDV 261
+++ +GLMD+NKGKEV SMIY++G++ E+S+ NA+IDMY KC N A VF+ MV RD+
Sbjct: 122 LKACVGLMDLNKGKEVQSMIYRMGFESELSVANALIDMYGKCGNTEYARLVFNVMVERDI 181
Query: 262 TSWTSMICGYSNAG 303
SWTSMI Y+N G
Sbjct: 182 VSWTSMIYSYANVG 195
Score = 86.3 bits (212), Expect = 4e-15
Identities = 65/157 (41%), Positives = 86/157 (54%), Gaps = 14/157 (8%)
Frame = +2
Query: 5 EETIRYFSLFPESRCYSPNKYTFSILLNLILV*WM*TRGRKSIL*FIKWVMIWRC----- 169
E++I YFSL +SR PNKYTF+++L + +G++ MI+R
Sbjct: 97 EKSIEYFSLLQQSRTI-PNKYTFAVVLKACVGLMDLNKGKEV------QSMIYRMGFESE 149
Query: 170 LLVML*LICI---------ASVETCTSLVRCLIKWLTEMLHHGRP*YVDTLMQGMIEESH 322
L V LI + A + + R ++ W T M++ Y + G IEES
Sbjct: 150 LSVANALIDMYGKCGNTEYARLVFNVMVERDIVSW-TSMIYS----YANV---GKIEESF 201
Query: 323 ILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
ILFEKM+ EG+KPN FTWNVMIAGYARRGDCD AF L
Sbjct: 202 ILFEKMRLEGIKPNDFTWNVMIAGYARRGDCDTAFML 238
Score = 50.8 bits (120), Expect(2) = 3e-07
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 97 GLMD-VNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWT 273
GL+D GKE+H + Y++ V + +A+IDMYS+C ++ A VF + ++V SW
Sbjct: 297 GLIDSAYTGKEIHGLAYRLELFANVFVASALIDMYSRCGSVEDAWNVFSSVPFKNVASWN 356
Query: 274 SMICGYSNAG 303
+MI Y G
Sbjct: 357 AMIGCYGKHG 366
Score = 29.3 bits (64), Expect(2) = 3e-07
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRG 409
G +E + LFEKM+ EG+ PN T +++ + G
Sbjct: 366 GRVENAIKLFEKMQYEGVLPNEVTLTSLLSACSHGG 401
>ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223551153|gb|EEF52639.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1218
Score = 71.2 bits (173), Expect(2) = 3e-17
Identities = 33/74 (44%), Positives = 48/74 (64%)
Frame = +1
Query: 82 IESYLGLMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDV 261
+ + L +N+G E+H++ K+G+ +V +GN++IDMYSKC L A KVFD M +DV
Sbjct: 352 VSACASLKVLNEGLEIHALAVKLGFVEDVLVGNSLIDMYSKCGKLENAWKVFDMMPEKDV 411
Query: 262 TSWTSMICGYSNAG 303
+W SMI GY G
Sbjct: 412 YTWNSMIGGYCQVG 425
Score = 42.7 bits (99), Expect(2) = 3e-17
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
G ++H+LF KM++ +PN TWN MI GY GD D A L
Sbjct: 425 GYCGKAHMLFMKMQKSETQPNAITWNNMIWGYIHNGDEDQAMDL 468
Score = 55.8 bits (133), Expect(2) = 9e-14
Identities = 25/66 (37%), Positives = 38/66 (57%)
Frame = +1
Query: 106 DVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSMIC 285
D+ G+ VHS+ K G D + N+I+ +Y+KC L LASK F+ M + +W ++I
Sbjct: 189 DIKSGEMVHSLAIKCGVDGYPFVNNSILAVYAKCGKLSLASKCFEMMDKSETAAWNALIS 248
Query: 286 GYSNAG 303
GY G
Sbjct: 249 GYCQHG 254
Score = 46.2 bits (108), Expect(2) = 9e-14
Identities = 20/44 (45%), Positives = 30/44 (68%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
G IEE+ LF+ M++EG++P +WN++IAGY + G D A L
Sbjct: 254 GQIEEAQRLFDAMREEGIEPGLVSWNILIAGYNQLGYFDIAMEL 297
>gb|EXB97347.1| hypothetical protein L484_024210 [Morus notabilis]
Length = 880
Score = 70.9 bits (172), Expect(2) = 3e-17
Identities = 31/74 (41%), Positives = 47/74 (63%)
Frame = +1
Query: 82 IESYLGLMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDV 261
+ + L + KG E+H+ K+G +V +GN++IDMYSKC L A +VFD ++ +DV
Sbjct: 350 VSACASLKSLGKGLEIHAFSIKIGLIEDVLVGNSLIDMYSKCGELEAAQEVFDMIIEKDV 409
Query: 262 TSWTSMICGYSNAG 303
+W S+I GY AG
Sbjct: 410 FTWNSLIGGYCQAG 423
Score = 42.7 bits (99), Expect(2) = 3e-17
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2
Query: 326 LFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
LF KM++ + PN TWNVMI+GY + GD D A L
Sbjct: 431 LFMKMQESDVAPNVITWNVMISGYIQNGDEDEAMDL 466
Score = 52.4 bits (124), Expect(2) = 7e-13
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = +1
Query: 106 DVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSMIC 285
D K +HSM+ + G+ + + N+I+ +Y+KC L A + F+ M RD+ SW ++I
Sbjct: 187 DFKTAKVIHSMVVRCGFCGSIRVINSILAVYAKCGKLNWARRFFESMDKRDLVSWNAIIS 246
Query: 286 GYSNAG 303
G+ G
Sbjct: 247 GFCQNG 252
Score = 46.6 bits (109), Expect(2) = 7e-13
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
G +EE+ LF+ +++EG +P TWN+MIA Y + G D A GL
Sbjct: 252 GRMEEATRLFDAVREEGTEPGLVTWNIMIASYNQLGQTDVAMGL 295
Score = 54.7 bits (130), Expect(2) = 1e-06
Identities = 21/64 (32%), Positives = 41/64 (64%)
Frame = +1
Query: 100 LMDVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSM 279
L+ K +E+H I + D E+ + N+++D Y+K N+ + +FD+M+++D+ +W S+
Sbjct: 528 LLAEKKVREIHCCILRRVLDSELPVANSLLDTYAKAGNMTYSRTIFDRMLSKDIITWNSI 587
Query: 280 ICGY 291
I GY
Sbjct: 588 IAGY 591
Score = 23.5 bits (49), Expect(2) = 1e-06
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 293 LMQGMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCD 418
++ G + LF+ M + GLKPN T+ +I + G D
Sbjct: 592 VLHGFSNAALDLFDDMTKSGLKPNRGTFLSIIYSCSLSGLVD 633
>ref|XP_006386200.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550344175|gb|ERP63997.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 810
Score = 57.0 bits (136), Expect(2) = 3e-17
Identities = 22/46 (47%), Positives = 34/46 (73%)
Frame = +2
Query: 296 MQGMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
++G +EE+H LF+ M +EG++P TWN++IAGY ++G CD A L
Sbjct: 175 LKGEVEEAHRLFDAMCEEGIEPGLVTWNILIAGYNQKGQCDVAMNL 220
Score = 56.6 bits (135), Expect(2) = 3e-17
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +1
Query: 106 DVNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSMIC 285
DV G+ +HS + + G + N+I+ +YSKC L LA + F+ M RD+ +W +M+
Sbjct: 112 DVKTGELLHSFVVRCGMGSSPRVNNSILAVYSKCGKLSLARRFFESMDERDIVAWNAMMS 171
Query: 286 GYSNAGD 306
GY G+
Sbjct: 172 GYCLKGE 178
Score = 65.1 bits (157), Expect(2) = 6e-16
Identities = 30/65 (46%), Positives = 42/65 (64%)
Frame = +1
Query: 109 VNKGKEVHSMIYKVGYDMEVSIGNAIIDMYSKCRNLYLASKVFDKMVNRDVTSWTSMICG 288
+N G +HS+ K+ + +V +GN++IDMYSKC L A VFD M +D+ +W SMI G
Sbjct: 284 LNTGLGIHSLAVKMSFVNDVLVGNSLIDMYSKCGQLGAAQLVFDLMSEKDLYTWNSMIGG 343
Query: 289 YSNAG 303
Y AG
Sbjct: 344 YCQAG 348
Score = 44.3 bits (103), Expect(2) = 6e-16
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +2
Query: 302 GMIEESHILFEKMKQEGLKPNHFTWNVMIAGYARRGDCDAAFGL 433
G ++++LF KM++ ++PN TWN MI+GY + GD D A L
Sbjct: 348 GYCGKAYVLFTKMQKSQVQPNVVTWNTMISGYIQSGDEDQAMDL 391