BLASTX nr result
ID: Rauwolfia21_contig00026217
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00026217
(578 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY27956.1| Pentatricopeptide, putative [Theobroma cacao] 88 1e-15
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi... 87 4e-15
gb|AHB18405.1| pentatricopeptide repeat-containing protein [Goss... 86 9e-15
gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum] 86 9e-15
gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossyp... 86 9e-15
gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossyp... 86 9e-15
ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, part... 85 2e-14
ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi... 85 2e-14
emb|CBI30711.3| unnamed protein product [Vitis vinifera] 85 2e-14
ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
ref|XP_006449535.1| hypothetical protein CICLE_v10014413mg [Citr... 84 3e-14
gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossyp... 84 3e-14
gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossyp... 84 3e-14
ref|XP_006414062.1| hypothetical protein EUTSA_v10024377mg [Eutr... 83 4e-14
gb|ESW31464.1| hypothetical protein PHAVU_002G240000g [Phaseolus... 82 8e-14
gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis] 80 5e-13
ref|XP_002870024.1| pentatricopeptide repeat-containing protein ... 80 5e-13
dbj|BAD94843.1| putative protein [Arabidopsis thaliana] 80 5e-13
ref|NP_193610.1| pentatricopeptide repeat protein DOT4 [Arabidop... 80 5e-13
ref|XP_004294643.1| PREDICTED: pentatricopeptide repeat-containi... 79 8e-13
>gb|EOY27956.1| Pentatricopeptide, putative [Theobroma cacao]
Length = 874
Score = 88.2 bits (217), Expect = 1e-15
Identities = 36/42 (85%), Positives = 39/42 (92%)
Frame = -1
Query: 578 VCGDCHEMAKCMSKELGREILLRDSNRFHHFKDGSCSCRGYW 453
+CGDCHEMAK MSKE GREI+LRDSNRFHHFKDG CSCRG+W
Sbjct: 833 ICGDCHEMAKFMSKETGREIVLRDSNRFHHFKDGYCSCRGFW 874
>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 86.7 bits (213), Expect = 4e-15
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = -1
Query: 578 VCGDCHEMAKCMSKELGREILLRDSNRFHHFKDGSCSCRGYW 453
VCGDCHEMAK MSK REI+LRDS+RFHHFKDGSCSCRGYW
Sbjct: 885 VCGDCHEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926
>gb|AHB18405.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 875
Score = 85.5 bits (210), Expect = 9e-15
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = -1
Query: 578 VCGDCHEMAKCMSKELGREILLRDSNRFHHFKDGSCSCRGYW 453
VCGDCHEMAK MSKE REI+LRDSNRFHHFKDG CSCRG+W
Sbjct: 834 VCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 875
>gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 85.5 bits (210), Expect = 9e-15
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = -1
Query: 578 VCGDCHEMAKCMSKELGREILLRDSNRFHHFKDGSCSCRGYW 453
VCGDCHEMAK MSKE REI+LRDSNRFHHFKDG CSCRG+W
Sbjct: 764 VCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
>gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 85.5 bits (210), Expect = 9e-15
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = -1
Query: 578 VCGDCHEMAKCMSKELGREILLRDSNRFHHFKDGSCSCRGYW 453
VCGDCHEMAK MSKE REI+LRDSNRFHHFKDG CSCRG+W
Sbjct: 626 VCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 667
>gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 85.5 bits (210), Expect = 9e-15
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = -1
Query: 578 VCGDCHEMAKCMSKELGREILLRDSNRFHHFKDGSCSCRGYW 453
VCGDCHEMAK MSKE REI+LRDSNRFHHFKDG CSCRG+W
Sbjct: 764 VCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
>ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, partial [Populus
trichocarpa] gi|550340410|gb|EEE86244.2| hypothetical
protein POPTR_0004s05810g, partial [Populus trichocarpa]
Length = 778
Score = 84.7 bits (208), Expect = 2e-14
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = -1
Query: 578 VCGDCHEMAKCMSKELGREILLRDSNRFHHFKDGSCSCRGYW 453
VCGDCHEMAK +SK LGREI+LRDSNRFHHFKDG C CRG+W
Sbjct: 737 VCGDCHEMAKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 778
>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 84.7 bits (208), Expect = 2e-14
Identities = 35/42 (83%), Positives = 39/42 (92%)
Frame = -1
Query: 578 VCGDCHEMAKCMSKELGREILLRDSNRFHHFKDGSCSCRGYW 453
VCGDCHEMAK MSK + R+I+LRDSNRFHHFKDGSCSCRG+W
Sbjct: 783 VCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 824
>emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 84.7 bits (208), Expect = 2e-14
Identities = 35/42 (83%), Positives = 39/42 (92%)
Frame = -1
Query: 578 VCGDCHEMAKCMSKELGREILLRDSNRFHHFKDGSCSCRGYW 453
VCGDCHEMAK MSK + R+I+LRDSNRFHHFKDGSCSCRG+W
Sbjct: 656 VCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697
>ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Citrus sinensis]
Length = 872
Score = 83.6 bits (205), Expect = 3e-14
Identities = 35/42 (83%), Positives = 37/42 (88%)
Frame = -1
Query: 578 VCGDCHEMAKCMSKELGREILLRDSNRFHHFKDGSCSCRGYW 453
VCGDCHEMAK MSK REI+LRDSNRFHHFKDG CSCRG+W
Sbjct: 831 VCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 872
>ref|XP_006449535.1| hypothetical protein CICLE_v10014413mg [Citrus clementina]
gi|557552146|gb|ESR62775.1| hypothetical protein
CICLE_v10014413mg [Citrus clementina]
Length = 725
Score = 83.6 bits (205), Expect = 3e-14
Identities = 35/42 (83%), Positives = 37/42 (88%)
Frame = -1
Query: 578 VCGDCHEMAKCMSKELGREILLRDSNRFHHFKDGSCSCRGYW 453
VCGDCHEMAK MSK REI+LRDSNRFHHFKDG CSCRG+W
Sbjct: 684 VCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 725
>gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 83.6 bits (205), Expect = 3e-14
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = -1
Query: 578 VCGDCHEMAKCMSKELGREILLRDSNRFHHFKDGSCSCRGYW 453
VCGDCHEMAK MSKE REI+LRDSNRFHHFK+G CSCRG+W
Sbjct: 764 VCGDCHEMAKFMSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805
>gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 83.6 bits (205), Expect = 3e-14
Identities = 35/42 (83%), Positives = 37/42 (88%)
Frame = -1
Query: 578 VCGDCHEMAKCMSKELGREILLRDSNRFHHFKDGSCSCRGYW 453
VCGDCHEMAK MSKE REI+LRD NRFHHFKDG CSCRG+W
Sbjct: 764 VCGDCHEMAKFMSKETRREIVLRDPNRFHHFKDGYCSCRGFW 805
>ref|XP_006414062.1| hypothetical protein EUTSA_v10024377mg [Eutrema salsugineum]
gi|557115232|gb|ESQ55515.1| hypothetical protein
EUTSA_v10024377mg [Eutrema salsugineum]
Length = 872
Score = 83.2 bits (204), Expect = 4e-14
Identities = 35/42 (83%), Positives = 37/42 (88%)
Frame = -1
Query: 578 VCGDCHEMAKCMSKELGREILLRDSNRFHHFKDGSCSCRGYW 453
VCGDCHEMAK MSK REI+LRDSNRFHHFKDG CSCRG+W
Sbjct: 831 VCGDCHEMAKLMSKLTRREIVLRDSNRFHHFKDGHCSCRGFW 872
>gb|ESW31464.1| hypothetical protein PHAVU_002G240000g [Phaseolus vulgaris]
Length = 618
Score = 82.4 bits (202), Expect = 8e-14
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = -1
Query: 578 VCGDCHEMAKCMSKELGREILLRDSNRFHHFKDGSCSCRGYW 453
VCGDCH+M K MSK GR+I+LRDSNRFHHFKDG CSCRG+W
Sbjct: 577 VCGDCHDMGKFMSKTTGRDIVLRDSNRFHHFKDGVCSCRGFW 618
>gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis]
Length = 877
Score = 79.7 bits (195), Expect = 5e-13
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = -1
Query: 578 VCGDCHEMAKCMSKELGREILLRDSNRFHHFKDGSCSCRGYW 453
VCGDCHE AK +SK REI+LRDSNRFHHFKDG CSCRG+W
Sbjct: 836 VCGDCHETAKFISKMSSREIVLRDSNRFHHFKDGHCSCRGFW 877
>ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297315860|gb|EFH46283.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 871
Score = 79.7 bits (195), Expect = 5e-13
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = -1
Query: 578 VCGDCHEMAKCMSKELGREILLRDSNRFHHFKDGSCSCRGYW 453
VCGDCHEMAK MSK REI+LRDSNRFH FKDG CSCRG+W
Sbjct: 830 VCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
>dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 79.7 bits (195), Expect = 5e-13
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = -1
Query: 578 VCGDCHEMAKCMSKELGREILLRDSNRFHHFKDGSCSCRGYW 453
VCGDCHEMAK MSK REI+LRDSNRFH FKDG CSCRG+W
Sbjct: 679 VCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 720
>ref|NP_193610.1| pentatricopeptide repeat protein DOT4 [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis
thaliana] gi|7268669|emb|CAB78877.1| putative protein
[Arabidopsis thaliana] gi|332658686|gb|AEE84086.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 871
Score = 79.7 bits (195), Expect = 5e-13
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = -1
Query: 578 VCGDCHEMAKCMSKELGREILLRDSNRFHHFKDGSCSCRGYW 453
VCGDCHEMAK MSK REI+LRDSNRFH FKDG CSCRG+W
Sbjct: 830 VCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
>ref|XP_004294643.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 870
Score = 79.0 bits (193), Expect = 8e-13
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = -1
Query: 578 VCGDCHEMAKCMSKELGREILLRDSNRFHHFKDGSCSCRGYW 453
VCGDCHEMAK +S+ REI+LRDSNRFHH KDG+CSCRG+W
Sbjct: 829 VCGDCHEMAKFISRTSRREIVLRDSNRFHHMKDGNCSCRGFW 870