BLASTX nr result

ID: Rauwolfia21_contig00025595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00025595
         (329 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY15761.1| TBP-associated factor 4, putative isoform 1 [Theo...    42   2e-07
gb|EOY15762.1| TBP-associated factor 4, putative isoform 2 [Theo...    42   2e-07
ref|XP_006472283.1| PREDICTED: transcription initiation factor T...    42   4e-06
ref|XP_006433616.1| hypothetical protein CICLE_v10000177mg [Citr...    42   4e-06

>gb|EOY15761.1| TBP-associated factor 4, putative isoform 1 [Theobroma cacao]
          Length = 950

 Score = 42.4 bits (98), Expect(2) = 2e-07
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = -3

Query: 57  CVEERMRGLICNLIRLSKQ 1
           CVEERMRGLICNLIRLSKQ
Sbjct: 719 CVEERMRGLICNLIRLSKQ 737



 Score = 38.1 bits (87), Expect(2) = 2e-07
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = -1

Query: 191 VAKSGLKNISNDVERCLSL 135
           +AKSGLKNISNDVERC+SL
Sbjct: 700 MAKSGLKNISNDVERCVSL 718


>gb|EOY15762.1| TBP-associated factor 4, putative isoform 2 [Theobroma cacao]
          Length = 944

 Score = 42.4 bits (98), Expect(2) = 2e-07
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = -3

Query: 57  CVEERMRGLICNLIRLSKQ 1
           CVEERMRGLICNLIRLSKQ
Sbjct: 719 CVEERMRGLICNLIRLSKQ 737



 Score = 38.1 bits (87), Expect(2) = 2e-07
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = -1

Query: 191 VAKSGLKNISNDVERCLSL 135
           +AKSGLKNISNDVERC+SL
Sbjct: 700 MAKSGLKNISNDVERCVSL 718


>ref|XP_006472283.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
           [Citrus sinensis]
          Length = 955

 Score = 41.6 bits (96), Expect(2) = 4e-06
 Identities = 18/19 (94%), Positives = 19/19 (100%)
 Frame = -3

Query: 57  CVEERMRGLICNLIRLSKQ 1
           CVEERMRGL+CNLIRLSKQ
Sbjct: 724 CVEERMRGLLCNLIRLSKQ 742



 Score = 34.7 bits (78), Expect(2) = 4e-06
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = -1

Query: 191 VAKSGLKNISNDVERCLSL 135
           + K GLKN+SNDVERCLSL
Sbjct: 705 MVKCGLKNMSNDVERCLSL 723


>ref|XP_006433616.1| hypothetical protein CICLE_v10000177mg [Citrus clementina]
           gi|557535738|gb|ESR46856.1| hypothetical protein
           CICLE_v10000177mg [Citrus clementina]
          Length = 954

 Score = 41.6 bits (96), Expect(2) = 4e-06
 Identities = 18/19 (94%), Positives = 19/19 (100%)
 Frame = -3

Query: 57  CVEERMRGLICNLIRLSKQ 1
           CVEERMRGL+CNLIRLSKQ
Sbjct: 724 CVEERMRGLLCNLIRLSKQ 742



 Score = 34.7 bits (78), Expect(2) = 4e-06
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = -1

Query: 191 VAKSGLKNISNDVERCLSL 135
           + K GLKN+SNDVERCLSL
Sbjct: 705 MVKCGLKNMSNDVERCLSL 723


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