BLASTX nr result
ID: Rauwolfia21_contig00025595
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rauwolfia21_contig00025595 (329 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EOY15761.1| TBP-associated factor 4, putative isoform 1 [Theo... 42 2e-07 gb|EOY15762.1| TBP-associated factor 4, putative isoform 2 [Theo... 42 2e-07 ref|XP_006472283.1| PREDICTED: transcription initiation factor T... 42 4e-06 ref|XP_006433616.1| hypothetical protein CICLE_v10000177mg [Citr... 42 4e-06 >gb|EOY15761.1| TBP-associated factor 4, putative isoform 1 [Theobroma cacao] Length = 950 Score = 42.4 bits (98), Expect(2) = 2e-07 Identities = 19/19 (100%), Positives = 19/19 (100%) Frame = -3 Query: 57 CVEERMRGLICNLIRLSKQ 1 CVEERMRGLICNLIRLSKQ Sbjct: 719 CVEERMRGLICNLIRLSKQ 737 Score = 38.1 bits (87), Expect(2) = 2e-07 Identities = 17/19 (89%), Positives = 19/19 (100%) Frame = -1 Query: 191 VAKSGLKNISNDVERCLSL 135 +AKSGLKNISNDVERC+SL Sbjct: 700 MAKSGLKNISNDVERCVSL 718 >gb|EOY15762.1| TBP-associated factor 4, putative isoform 2 [Theobroma cacao] Length = 944 Score = 42.4 bits (98), Expect(2) = 2e-07 Identities = 19/19 (100%), Positives = 19/19 (100%) Frame = -3 Query: 57 CVEERMRGLICNLIRLSKQ 1 CVEERMRGLICNLIRLSKQ Sbjct: 719 CVEERMRGLICNLIRLSKQ 737 Score = 38.1 bits (87), Expect(2) = 2e-07 Identities = 17/19 (89%), Positives = 19/19 (100%) Frame = -1 Query: 191 VAKSGLKNISNDVERCLSL 135 +AKSGLKNISNDVERC+SL Sbjct: 700 MAKSGLKNISNDVERCVSL 718 >ref|XP_006472283.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like [Citrus sinensis] Length = 955 Score = 41.6 bits (96), Expect(2) = 4e-06 Identities = 18/19 (94%), Positives = 19/19 (100%) Frame = -3 Query: 57 CVEERMRGLICNLIRLSKQ 1 CVEERMRGL+CNLIRLSKQ Sbjct: 724 CVEERMRGLLCNLIRLSKQ 742 Score = 34.7 bits (78), Expect(2) = 4e-06 Identities = 15/19 (78%), Positives = 17/19 (89%) Frame = -1 Query: 191 VAKSGLKNISNDVERCLSL 135 + K GLKN+SNDVERCLSL Sbjct: 705 MVKCGLKNMSNDVERCLSL 723 >ref|XP_006433616.1| hypothetical protein CICLE_v10000177mg [Citrus clementina] gi|557535738|gb|ESR46856.1| hypothetical protein CICLE_v10000177mg [Citrus clementina] Length = 954 Score = 41.6 bits (96), Expect(2) = 4e-06 Identities = 18/19 (94%), Positives = 19/19 (100%) Frame = -3 Query: 57 CVEERMRGLICNLIRLSKQ 1 CVEERMRGL+CNLIRLSKQ Sbjct: 724 CVEERMRGLLCNLIRLSKQ 742 Score = 34.7 bits (78), Expect(2) = 4e-06 Identities = 15/19 (78%), Positives = 17/19 (89%) Frame = -1 Query: 191 VAKSGLKNISNDVERCLSL 135 + K GLKN+SNDVERCLSL Sbjct: 705 MVKCGLKNMSNDVERCLSL 723