BLASTX nr result
ID: Rauwolfia21_contig00025443
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00025443
(411 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX93311.1| RNA-binding family protein isoform 1 [Theobroma c... 115 8e-24
ref|XP_004971023.1| PREDICTED: glycine-rich RNA-binding protein ... 109 3e-22
ref|XP_004971022.1| PREDICTED: glycine-rich RNA-binding protein ... 109 3e-22
ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [... 108 7e-22
gb|EAY76934.1| hypothetical protein OsI_04892 [Oryza sativa Indi... 108 1e-21
ref|XP_006357956.1| PREDICTED: glycine-rich RNA-binding protein ... 106 4e-21
ref|XP_006447631.1| hypothetical protein CICLE_v10017091mg [Citr... 106 4e-21
ref|XP_004243523.1| PREDICTED: glycine-rich RNA-binding protein ... 104 1e-20
gb|EXB37811.1| Glycine-rich RNA-binding protein 2 [Morus notabilis] 103 2e-20
ref|XP_006846342.1| hypothetical protein AMTR_s00012p00258090 [A... 103 2e-20
gb|EEE55875.1| hypothetical protein OsJ_04517 [Oryza sativa Japo... 103 3e-20
ref|XP_004502036.1| PREDICTED: RNA-binding protein Musashi homol... 102 4e-20
gb|ESW27995.1| hypothetical protein PHAVU_003G2503000g, partial ... 102 7e-20
ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein ... 102 7e-20
ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein ... 100 2e-19
ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein ... 100 2e-19
ref|NP_001130982.1| hypothetical protein [Zea mays] gi|194690622... 100 2e-19
gb|EMT16486.1| Pentatricopeptide repeat-containing protein [Aegi... 98 1e-18
gb|EMJ16064.1| hypothetical protein PRUPE_ppa019893mg [Prunus pe... 97 2e-18
ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago t... 97 2e-18
>gb|EOX93311.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 137
Score = 115 bits (287), Expect = 8e-24
Identities = 54/64 (84%), Positives = 61/64 (95%)
Frame = -2
Query: 410 VRIVYDKETGRPRGFGFVHFSKEEEARCAKEAMDGKPLLGRPLRITFALDKVRGAPVVVP 231
VRI+YDK+TGR RGFGFVHFSKE+EARCAK+AMDGK LLGRPLRI+FAL+K+RGAPVVVP
Sbjct: 71 VRIMYDKDTGRSRGFGFVHFSKEDEARCAKDAMDGKALLGRPLRISFALEKIRGAPVVVP 130
Query: 230 RLWN 219
RL N
Sbjct: 131 RLPN 134
>ref|XP_004971023.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X2 [Setaria italica]
Length = 143
Score = 109 bits (273), Expect = 3e-22
Identities = 49/62 (79%), Positives = 58/62 (93%)
Frame = -2
Query: 410 VRIVYDKETGRPRGFGFVHFSKEEEARCAKEAMDGKPLLGRPLRITFALDKVRGAPVVVP 231
VRI+YDK +GRPRGFGFVHFS + EA+CAK+AMDGK +LGRPLRI+FAL+KVRGAPV+VP
Sbjct: 78 VRIIYDKNSGRPRGFGFVHFSNDHEAKCAKDAMDGKVMLGRPLRISFALEKVRGAPVIVP 137
Query: 230 RL 225
RL
Sbjct: 138 RL 139
>ref|XP_004971022.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Setaria italica]
Length = 145
Score = 109 bits (273), Expect = 3e-22
Identities = 49/62 (79%), Positives = 58/62 (93%)
Frame = -2
Query: 410 VRIVYDKETGRPRGFGFVHFSKEEEARCAKEAMDGKPLLGRPLRITFALDKVRGAPVVVP 231
VRI+YDK +GRPRGFGFVHFS + EA+CAK+AMDGK +LGRPLRI+FAL+KVRGAPV+VP
Sbjct: 78 VRIIYDKNSGRPRGFGFVHFSNDHEAKCAKDAMDGKVMLGRPLRISFALEKVRGAPVIVP 137
Query: 230 RL 225
RL
Sbjct: 138 RL 139
>ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding
protein, putative [Ricinus communis]
Length = 126
Score = 108 bits (270), Expect = 7e-22
Identities = 52/72 (72%), Positives = 62/72 (86%)
Frame = -2
Query: 410 VRIVYDKETGRPRGFGFVHFSKEEEARCAKEAMDGKPLLGRPLRITFALDKVRGAPVVVP 231
VRI+YDK++GR RGFGFV+FSKE EA CAK+AMDGK LLGRPLRI+FAL+KVRG P+VVP
Sbjct: 54 VRIMYDKDSGRSRGFGFVNFSKENEAVCAKDAMDGKALLGRPLRISFALEKVRGGPIVVP 113
Query: 230 RLWNSGIPSGEN 195
RL ++G S N
Sbjct: 114 RLSSAGDNSNRN 125
>gb|EAY76934.1| hypothetical protein OsI_04892 [Oryza sativa Indica Group]
Length = 505
Score = 108 bits (269), Expect = 1e-21
Identities = 51/62 (82%), Positives = 57/62 (91%)
Frame = -2
Query: 410 VRIVYDKETGRPRGFGFVHFSKEEEARCAKEAMDGKPLLGRPLRITFALDKVRGAPVVVP 231
VRI+YDK +GR RGFGFVHFS E EA+CAK+AMDGK +LGRPLRI+FALDKVRGAPVVVP
Sbjct: 429 VRIMYDKNSGRSRGFGFVHFSNEYEAKCAKDAMDGKVMLGRPLRISFALDKVRGAPVVVP 488
Query: 230 RL 225
RL
Sbjct: 489 RL 490
>ref|XP_006357956.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Solanum tuberosum]
Length = 151
Score = 106 bits (264), Expect = 4e-21
Identities = 50/66 (75%), Positives = 59/66 (89%)
Frame = -2
Query: 410 VRIVYDKETGRPRGFGFVHFSKEEEARCAKEAMDGKPLLGRPLRITFALDKVRGAPVVVP 231
VRI+YDKETGR RGFGFV+FSK+EEA AK++MDGK LGRPLR++FAL+KVRGAPVVVP
Sbjct: 79 VRIMYDKETGRSRGFGFVYFSKDEEASSAKDSMDGKAFLGRPLRVSFALEKVRGAPVVVP 138
Query: 230 RLWNSG 213
RL +G
Sbjct: 139 RLTGTG 144
>ref|XP_006447631.1| hypothetical protein CICLE_v10017091mg [Citrus clementina]
gi|568830698|ref|XP_006469627.1| PREDICTED: glycine-rich
RNA-binding protein 4, mitochondrial-like [Citrus
sinensis] gi|557550242|gb|ESR60871.1| hypothetical
protein CICLE_v10017091mg [Citrus clementina]
Length = 145
Score = 106 bits (264), Expect = 4e-21
Identities = 50/72 (69%), Positives = 61/72 (84%)
Frame = -2
Query: 410 VRIVYDKETGRPRGFGFVHFSKEEEARCAKEAMDGKPLLGRPLRITFALDKVRGAPVVVP 231
V+I+YDK++GR RGFGFVHFSKE++A AK AMDGK LLGRPLRI+FAL++VRG PVVVP
Sbjct: 73 VKIIYDKDSGRSRGFGFVHFSKEDDAESAKHAMDGKGLLGRPLRISFALERVRGEPVVVP 132
Query: 230 RLWNSGIPSGEN 195
R+ N+G S N
Sbjct: 133 RITNNGDFSSRN 144
>ref|XP_004243523.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Solanum lycopersicum]
Length = 141
Score = 104 bits (259), Expect = 1e-20
Identities = 49/66 (74%), Positives = 59/66 (89%)
Frame = -2
Query: 410 VRIVYDKETGRPRGFGFVHFSKEEEARCAKEAMDGKPLLGRPLRITFALDKVRGAPVVVP 231
VRI+YDKETGR RGFGFV+F K+EEA AK++MDGK LGRPLR++FAL+KVRGAPVVVP
Sbjct: 69 VRIMYDKETGRSRGFGFVYFLKDEEASSAKDSMDGKAFLGRPLRVSFALEKVRGAPVVVP 128
Query: 230 RLWNSG 213
RL ++G
Sbjct: 129 RLTSTG 134
>gb|EXB37811.1| Glycine-rich RNA-binding protein 2 [Morus notabilis]
Length = 153
Score = 103 bits (258), Expect = 2e-20
Identities = 50/66 (75%), Positives = 58/66 (87%)
Frame = -2
Query: 410 VRIVYDKETGRPRGFGFVHFSKEEEARCAKEAMDGKPLLGRPLRITFALDKVRGAPVVVP 231
VRI+YDK++GR RGFGFVHF KEE+A AK++MDGK LLGRPLRI+FAL+KVRG PVVVP
Sbjct: 81 VRILYDKDSGRSRGFGFVHFLKEEDAVSAKDSMDGKALLGRPLRISFALEKVRGVPVVVP 140
Query: 230 RLWNSG 213
RL N G
Sbjct: 141 RLSNVG 146
>ref|XP_006846342.1| hypothetical protein AMTR_s00012p00258090 [Amborella trichopoda]
gi|548849112|gb|ERN08017.1| hypothetical protein
AMTR_s00012p00258090 [Amborella trichopoda]
Length = 132
Score = 103 bits (257), Expect = 2e-20
Identities = 45/62 (72%), Positives = 58/62 (93%)
Frame = -2
Query: 410 VRIVYDKETGRPRGFGFVHFSKEEEARCAKEAMDGKPLLGRPLRITFALDKVRGAPVVVP 231
VRI+YD+++GR RGFGF++FS E+EA+CAK+AMDGK LLGRPLRI+FA++KVRG P+VVP
Sbjct: 63 VRIIYDRDSGRSRGFGFIYFSNEDEAKCAKDAMDGKALLGRPLRISFAIEKVRGGPLVVP 122
Query: 230 RL 225
RL
Sbjct: 123 RL 124
>gb|EEE55875.1| hypothetical protein OsJ_04517 [Oryza sativa Japonica Group]
Length = 74
Score = 103 bits (256), Expect = 3e-20
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = -2
Query: 401 VYDKETGRPRGFGFVHFSKEEEARCAKEAMDGKPLLGRPLRITFALDKVRGAPVVVPRL 225
+YDK +GR RGFGFVHFS E EA+CAK+AMDGK +LGRPLRI+FALDKVRGAPVVVPRL
Sbjct: 1 MYDKNSGRSRGFGFVHFSNEYEAKCAKDAMDGKVMLGRPLRISFALDKVRGAPVVVPRL 59
>ref|XP_004502036.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cicer
arietinum]
Length = 180
Score = 102 bits (255), Expect = 4e-20
Identities = 50/67 (74%), Positives = 56/67 (83%)
Frame = -2
Query: 410 VRIVYDKETGRPRGFGFVHFSKEEEARCAKEAMDGKPLLGRPLRITFALDKVRGAPVVVP 231
VRIVYDK+TGR RGFGFV FS EE A+ AK++MDGK LLGRPLRI FALDKVRG PVVVP
Sbjct: 108 VRIVYDKDTGRSRGFGFVIFSNEEHAKSAKDSMDGKALLGRPLRINFALDKVRGGPVVVP 167
Query: 230 RLWNSGI 210
R + G+
Sbjct: 168 RFSDIGV 174
>gb|ESW27995.1| hypothetical protein PHAVU_003G2503000g, partial [Phaseolus
vulgaris]
Length = 93
Score = 102 bits (253), Expect = 7e-20
Identities = 48/66 (72%), Positives = 57/66 (86%)
Frame = -2
Query: 410 VRIVYDKETGRPRGFGFVHFSKEEEARCAKEAMDGKPLLGRPLRITFALDKVRGAPVVVP 231
VRIVYDK++GR RGFGF+ FS E++A+CAKEAMDGK LLGRPLRI+ AL+K RG PVVVP
Sbjct: 23 VRIVYDKDSGRSRGFGFIIFSNEDDAKCAKEAMDGKALLGRPLRISIALEKARGVPVVVP 82
Query: 230 RLWNSG 213
RL + G
Sbjct: 83 RLSDIG 88
>ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus] gi|449522522|ref|XP_004168275.1|
PREDICTED: glycine-rich RNA-binding protein 2,
mitochondrial-like [Cucumis sativus]
Length = 145
Score = 102 bits (253), Expect = 7e-20
Identities = 48/64 (75%), Positives = 57/64 (89%)
Frame = -2
Query: 410 VRIVYDKETGRPRGFGFVHFSKEEEARCAKEAMDGKPLLGRPLRITFALDKVRGAPVVVP 231
VRIVYDK++GR RGFGFV+F+ +A+CAK+AMDGK +LGRPLRI+FALDKVRG PVVVP
Sbjct: 73 VRIVYDKDSGRSRGFGFVNFANGNDAQCAKDAMDGKAVLGRPLRISFALDKVRGEPVVVP 132
Query: 230 RLWN 219
RL N
Sbjct: 133 RLSN 136
>ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Glycine max]
Length = 137
Score = 100 bits (250), Expect = 2e-19
Identities = 48/66 (72%), Positives = 56/66 (84%)
Frame = -2
Query: 410 VRIVYDKETGRPRGFGFVHFSKEEEARCAKEAMDGKPLLGRPLRITFALDKVRGAPVVVP 231
V IVYDK++GR RGFGFV FS E++A+CAK+AMDGK LLGRPLRI FAL+K RG PVVVP
Sbjct: 67 VTIVYDKDSGRSRGFGFVIFSNEDDAKCAKDAMDGKALLGRPLRINFALEKARGVPVVVP 126
Query: 230 RLWNSG 213
RL + G
Sbjct: 127 RLSDIG 132
>ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
vinifera] gi|297739201|emb|CBI28852.3| unnamed protein
product [Vitis vinifera]
Length = 140
Score = 100 bits (250), Expect = 2e-19
Identities = 46/66 (69%), Positives = 57/66 (86%)
Frame = -2
Query: 410 VRIVYDKETGRPRGFGFVHFSKEEEARCAKEAMDGKPLLGRPLRITFALDKVRGAPVVVP 231
VRI+YDK++GR RGFGFV+FSKE +AR AK+AMDGK LGRPLR+++AL+KVRG P+VVP
Sbjct: 67 VRIMYDKDSGRSRGFGFVYFSKEVDARSAKDAMDGKAFLGRPLRVSYALEKVRGGPIVVP 126
Query: 230 RLWNSG 213
R N G
Sbjct: 127 RRLNGG 132
>ref|NP_001130982.1| hypothetical protein [Zea mays] gi|194690622|gb|ACF79395.1| unknown
[Zea mays] gi|413951564|gb|AFW84213.1| hypothetical
protein ZEAMMB73_909652 [Zea mays]
Length = 142
Score = 100 bits (249), Expect = 2e-19
Identities = 46/62 (74%), Positives = 55/62 (88%)
Frame = -2
Query: 410 VRIVYDKETGRPRGFGFVHFSKEEEARCAKEAMDGKPLLGRPLRITFALDKVRGAPVVVP 231
VRI+YDK +GR RGFGFVHFS + EA+CAK+AMDGK +LGRPLRI+FAL +VRGA V+VP
Sbjct: 77 VRIMYDKNSGRSRGFGFVHFSNDNEAKCAKDAMDGKVMLGRPLRISFALGRVRGASVIVP 136
Query: 230 RL 225
RL
Sbjct: 137 RL 138
>gb|EMT16486.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 714
Score = 98.2 bits (243), Expect = 1e-18
Identities = 46/62 (74%), Positives = 53/62 (85%)
Frame = -2
Query: 410 VRIVYDKETGRPRGFGFVHFSKEEEARCAKEAMDGKPLLGRPLRITFALDKVRGAPVVVP 231
VRI+YDK +GR RGFGFV FS EA+CAK+AMDGK +LGR LRI+FALDKVRG PV+VP
Sbjct: 618 VRIMYDKNSGRSRGFGFVQFSNNYEAKCAKDAMDGKVMLGRALRISFALDKVRGGPVIVP 677
Query: 230 RL 225
RL
Sbjct: 678 RL 679
>gb|EMJ16064.1| hypothetical protein PRUPE_ppa019893mg [Prunus persica]
Length = 140
Score = 97.4 bits (241), Expect = 2e-18
Identities = 44/66 (66%), Positives = 60/66 (90%)
Frame = -2
Query: 410 VRIVYDKETGRPRGFGFVHFSKEEEARCAKEAMDGKPLLGRPLRITFALDKVRGAPVVVP 231
V+IVYD+++GR RGFGFV+F+KE++A+ A++AMDGK LLGRPLR+T+AL++VRG VVVP
Sbjct: 71 VKIVYDRDSGRSRGFGFVNFTKEDDAQVARDAMDGKALLGRPLRVTYALERVRGGHVVVP 130
Query: 230 RLWNSG 213
RL +SG
Sbjct: 131 RLSDSG 136
>ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490432|gb|AES71635.1| Glycine-rich RNA-binding
protein [Medicago truncatula]
Length = 135
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/66 (71%), Positives = 55/66 (83%)
Frame = -2
Query: 410 VRIVYDKETGRPRGFGFVHFSKEEEARCAKEAMDGKPLLGRPLRITFALDKVRGAPVVVP 231
VRIVYDK++GR RGFGFV FS E+ A+ AK+AMDGK LLGRPLRI FAL+K RG PVVVP
Sbjct: 65 VRIVYDKDSGRARGFGFVIFSNEDAAKSAKDAMDGKALLGRPLRINFALEKPRGIPVVVP 124
Query: 230 RLWNSG 213
R ++G
Sbjct: 125 RFTDNG 130