BLASTX nr result

ID: Rauwolfia21_contig00025230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00025230
         (358 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006362605.1| PREDICTED: peptidyl-prolyl cis-trans isomera...    68   1e-09
ref|XP_004233225.1| PREDICTED: peptidyl-prolyl cis-trans isomera...    64   2e-08
ref|XP_002867918.1| hypothetical protein ARALYDRAFT_492887 [Arab...    58   1e-06
ref|XP_006282708.1| hypothetical protein CARUB_v10005678mg [Caps...    56   4e-06

>ref|XP_006362605.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-1,
           chloroplastic-like [Solanum tuberosum]
          Length = 218

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 43/89 (48%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
 Frame = -2

Query: 255 PKPLSVPRIHASQISXXXXXXXXXAFSLLALTTSFSGFLLFSAVN----STSWSKPTNLE 88
           P  L +P  H  + S         AFSL ALT S S  L+FS  N    S SW+ P   +
Sbjct: 12  PTYLYIPHPHKIEASSSSTQKSRRAFSLSALTISLSA-LVFSNGNGPTTSISWANPQVPK 70

Query: 87  FWELPNSGGVRALDLRIGGGEVPVNGNKV 1
           F ELPNSGGV+ALDLRIG GE P++G+ V
Sbjct: 71  FLELPNSGGVKALDLRIGDGETPIDGDLV 99


>ref|XP_004233225.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-1,
           chloroplastic-like [Solanum lycopersicum]
          Length = 215

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 7/90 (7%)
 Frame = -2

Query: 249 PLSVPR---IHASQISXXXXXXXXXAFSLLALTTSFSGFLLFSAVN----STSWSKPTNL 91
           PL  P    +H  + S         AFSL ALT S S  L+FS+ N    S SW+ P   
Sbjct: 8   PLPCPTYLYLHKIEASTSSTHKSRRAFSLSALTISLSA-LVFSSGNAPTTSISWANPQVP 66

Query: 90  EFWELPNSGGVRALDLRIGGGEVPVNGNKV 1
           +F +LPNSGGV+ALDLR+G GE P++G+ V
Sbjct: 67  KFLDLPNSGGVKALDLRVGDGETPIDGDLV 96


>ref|XP_002867918.1| hypothetical protein ARALYDRAFT_492887 [Arabidopsis lyrata subsp.
           lyrata] gi|297313754|gb|EFH44177.1| hypothetical protein
           ARALYDRAFT_492887 [Arabidopsis lyrata subsp. lyrata]
          Length = 229

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 26/44 (59%), Positives = 34/44 (77%)
 Frame = -2

Query: 132 SAVNSTSWSKPTNLEFWELPNSGGVRALDLRIGGGEVPVNGNKV 1
           S V+S S+S P   EF E+PNSGGV+ALDLR G GEVP+ G+++
Sbjct: 65  SVVSSVSFSSPALAEFSEIPNSGGVKALDLRTGDGEVPIEGDQI 108


>ref|XP_006282708.1| hypothetical protein CARUB_v10005678mg [Capsella rubella]
           gi|482551413|gb|EOA15606.1| hypothetical protein
           CARUB_v10005678mg [Capsella rubella]
          Length = 225

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
 Frame = -2

Query: 285 SPSHL-LLNSRPKPLSVPRIHASQISXXXXXXXXXAFSLLALTTSFSGFLLFSAVNSTSW 109
           SPS   +  SR  P S P   A+            + S++A+T+S         V+S  +
Sbjct: 23  SPSSFRIFASRSSPSSSPSTVAAS-------RRSISLSIIAVTSS--------VVSSLGF 67

Query: 108 SKPTNLEFWELPNSGGVRALDLRIGGGEVPVNGNKV 1
           S P   EF E+P+SGGV++LDLRIG GEVP+ G+++
Sbjct: 68  SSPAQAEFSEIPDSGGVKSLDLRIGDGEVPIEGDQI 103


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