BLASTX nr result
ID: Rauwolfia21_contig00025224
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00025224
(780 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006356764.1| PREDICTED: pentatricopeptide repeat-containi... 262 1e-67
gb|ABR17838.1| unknown [Picea sitchensis] 135 1e-29
ref|XP_004497438.1| PREDICTED: pentatricopeptide repeat-containi... 133 6e-29
ref|XP_004497436.1| PREDICTED: pentatricopeptide repeat-containi... 129 1e-27
ref|XP_004246924.1| PREDICTED: pentatricopeptide repeat-containi... 129 1e-27
gb|ESW31754.1| hypothetical protein PHAVU_002G264900g [Phaseolus... 128 2e-27
ref|XP_006305855.1| hypothetical protein CARUB_v10010934mg [Caps... 128 2e-27
ref|XP_006838295.1| hypothetical protein AMTR_s00103p00113040 [A... 128 2e-27
ref|XP_002512645.1| pentatricopeptide repeat-containing protein,... 127 3e-27
ref|XP_002525211.1| pentatricopeptide repeat-containing protein,... 127 4e-27
ref|XP_002308496.1| pentatricopeptide repeat-containing family p... 126 7e-27
gb|EXB23431.1| hypothetical protein L484_005720 [Morus notabilis] 126 9e-27
ref|XP_004987089.1| PREDICTED: pentatricopeptide repeat-containi... 126 9e-27
ref|XP_006844488.1| hypothetical protein AMTR_s00016p00115350 [A... 125 1e-26
ref|XP_004305232.1| PREDICTED: pentatricopeptide repeat-containi... 125 1e-26
ref|XP_006345726.1| PREDICTED: pentatricopeptide repeat-containi... 125 2e-26
ref|NP_001141725.1| hypothetical protein [Zea mays] gi|194705708... 125 2e-26
dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana] 124 3e-26
ref|NP_175445.1| pentatricopeptide repeat-containing protein [Ar... 124 3e-26
ref|XP_003520781.2| PREDICTED: putative pentatricopeptide repeat... 123 6e-26
>ref|XP_006356764.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Solanum tuberosum]
Length = 699
Score = 262 bits (669), Expect = 1e-67
Identities = 131/230 (56%), Positives = 168/230 (73%)
Frame = +2
Query: 89 MNRHARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIIC 268
M++HA LIKLGL+ ++A+ LIA Y SP NSL+ Q+VF+QVP + DT LW S+I
Sbjct: 1 MSKHAWLIKLGLDTSPLYATNLIAHYVSSPIPNSLTIAQKVFDQVPHK--DTTLWTSLIS 58
Query: 269 AYSRSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQA 448
+Y+RSNQPHKAL LFS M Y ++ P +PN +VFT+VARAIAS+P+ LGQ
Sbjct: 59 SYARSNQPHKALHLFSVMLNQYQSN----PDTAAQPNHFVFTAVARAIASSPQNFKLGQN 114
Query: 449 LHAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNG 628
LHAH++K GF+P D+ VETA +D+Y+KC + A+ +FDEM RNLVTWNA++SGYVQNG
Sbjct: 115 LHAHVMKSGFLPGDIVVETAFLDLYSKCGVVECARMMFDEMCRRNLVTWNAVISGYVQNG 174
Query: 629 MENFGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHGYAIV 778
E GL LF +M E Y+PDE+TVATVL GC VQ+L LGMQ+HGYA V
Sbjct: 175 RECEGLELFYQMKCREFYVPDEYTVATVLSGCGYVQELFLGMQVHGYAFV 224
Score = 64.3 bits (155), Expect = 4e-08
Identities = 54/192 (28%), Positives = 82/192 (42%), Gaps = 3/192 (1%)
Frame = +2
Query: 191 LSQVQQVFEQVPFRLRDTALWASIICAYSRSNQPHKALRLFSDMRRHYGNDSSISPALNT 370
+ + +FE +P + W S++ Y + P + L L + M D
Sbjct: 388 IEDAKALFEHMPEKT--IVSWTSMMTGYVQKGLPREGLNLLAKMYSGEERD-------RL 438
Query: 371 RPNSYVFTSVARAIASAPEQASLGQALHAHIIKEGFIPK---DVFVETALVDMYAKCAAT 541
N F VA S G+ +HA II+E +P +V V TALVDMY+K
Sbjct: 439 EGNCLTFV-VALEACSHLTDLDKGKQIHAKIIRE--LPDADDNVAVGTALVDMYSKSGHL 495
Query: 542 DSAKKVFDEMPYRNLVTWNAMLSGYVQNGMENFGLNLFLEMTGSEVYLPDEFTVATVLMG 721
++FD M +N+V+W + + G+ +G L LF M + P+E T VL
Sbjct: 496 CYTLRLFDAMEEKNVVSWTSAIMGFAVHGFAFQALELFQRMVNMGIN-PNEVTFTAVLTA 554
Query: 722 CAQVQDLVLGMQ 757
C + GMQ
Sbjct: 555 CRHCGLVDEGMQ 566
Score = 57.4 bits (137), Expect = 5e-06
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +2
Query: 506 ALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMENFGLNLFLEMTGSEVYL 685
+L+ Y + AK +F+ MP + +V+W +M++GYVQ G+ GLNL +M E
Sbjct: 377 SLLSGYINNGLIEDAKALFEHMPEKTIVSWTSMMTGYVQKGLPREGLNLLAKMYSGEERD 436
Query: 686 PDE---FTVATVLMGCAQVQDLVLGMQIHGYAI 775
E T L C+ + DL G QIH I
Sbjct: 437 RLEGNCLTFVVALEACSHLTDLDKGKQIHAKII 469
>gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 135 bits (341), Expect = 1e-29
Identities = 89/228 (39%), Positives = 126/228 (55%), Gaps = 2/228 (0%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
H I+ G+ +D + + L+ YA GN ++ ++FE++P +RD A W +II YS
Sbjct: 244 HCYAIRSGIESDVLVVNGLVNMYA--KCGN-VNTAHKLFERMP--IRDVASWNAIIGGYS 298
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIAS--APEQASLGQAL 451
++Q H+AL F+ M+ +PNS SV A A A EQ GQ +
Sbjct: 299 LNSQHHEALAFFNRMQ-----------VRGIKPNSITMVSVLPACAHLFALEQ---GQQI 344
Query: 452 HAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGM 631
H + I+ GF DV V ALV+MYAKC +SA K+F+ MP +N+V WNA++SGY Q+G
Sbjct: 345 HGYAIRSGFESNDV-VGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGH 403
Query: 632 ENFGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHGYAI 775
+ L LF+EM + PD F + +VL CA L G QIHGY I
Sbjct: 404 PHEALALFIEMQAQGI-KPDSFAIVSVLPACAHFLALEQGKQIHGYTI 450
Score = 110 bits (275), Expect = 5e-22
Identities = 71/191 (37%), Positives = 102/191 (53%)
Frame = +2
Query: 203 QQVFEQVPFRLRDTALWASIICAYSRSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNS 382
Q F Q R + +W I Y ++ +KALRL+ M+R P+
Sbjct: 73 QTQFTQTDIR-NNAVVWKETIIGYVKNGFWNKALRLYYQMQR-----------TGINPDK 120
Query: 383 YVFTSVARAIASAPEQASLGQALHAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVF 562
VF SV +A S + + G+ +H II GF DV V TAL MY KC + ++A++VF
Sbjct: 121 LVFLSVIKACGSQSDLQA-GRKVHEDIIARGF-ESDVIVGTALASMYTKCGSLENARQVF 178
Query: 563 DEMPYRNLVTWNAMLSGYVQNGMENFGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDL 742
D MP R++V+WNA+++GY QNG L LF EM + + P+ T+ +V+ CA + L
Sbjct: 179 DRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGI-KPNSSTLVSVMPVCAHLLAL 237
Query: 743 VLGMQIHGYAI 775
G QIH YAI
Sbjct: 238 EQGKQIHCYAI 248
Score = 96.3 bits (238), Expect = 1e-17
Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 4/224 (1%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
H I+ G ++ V + L+ YA NS ++FE++P ++ W +II YS
Sbjct: 345 HGYAIRSGFESNDVVGNALVNMYAKCGNVNS---AYKLFERMP--KKNVVAWNAIISGYS 399
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIAS--APEQASLGQAL 451
+ PH+AL LF +M+ A +P+S+ SV A A A EQ G+ +
Sbjct: 400 QHGHPHEALALFIEMQ-----------AQGIKPDSFAIVSVLPACAHFLALEQ---GKQI 445
Query: 452 HAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGM 631
H + I+ GF +V V T LVD+YAKC ++A+K+F+ MP +++V+W M+ Y +G
Sbjct: 446 HGYTIRSGF-ESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGH 504
Query: 632 ENFGLNLFLEM--TGSEVYLPDEFTVATVLMGCAQVQDLVLGMQ 757
L LF +M TG+++ D +L C+ + G+Q
Sbjct: 505 GEDALALFSKMQETGTKL---DHIAFTAILTACSHAGLVDQGLQ 545
>ref|XP_004497438.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cicer arietinum]
Length = 668
Score = 133 bits (335), Expect = 6e-29
Identities = 77/225 (34%), Positives = 127/225 (56%), Gaps = 3/225 (1%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
HARL + + ASKLI YA S N + + VF+++P + T + +++ AYS
Sbjct: 56 HARLFLFSITPNNFLASKLITFYAQS---NLTREARSVFDKIPHK--STFSFNAMLIAYS 110
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASL---GQA 448
+ H AL LFS D+ +SP +++ T + +A+AS+ +S +A
Sbjct: 111 SKSLFHDALNLFSSFVS--STDTGVSP------DNFTVTCILKALASSSSSSSCFESAKA 162
Query: 449 LHAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNG 628
+H ++++ GF DVF AL+ Y +C + A+KVFD+M R++VTWN+M+ GY Q+G
Sbjct: 163 IHCYVLQRGF-NSDVFALNALITCYCRCGRIEMARKVFDKMMQRDIVTWNSMIGGYSQSG 221
Query: 629 MENFGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIH 763
L+LEM G E +P+ T+ +V+ C Q +DL+LG+++H
Sbjct: 222 FYEECKRLYLEMLGVEGIVPNAVTIVSVMQACGQSKDLILGIEVH 266
Score = 77.0 bits (188), Expect = 7e-12
Identities = 69/258 (26%), Positives = 117/258 (45%), Gaps = 32/258 (12%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
H +++ G N+D + LI Y + ++VF+++ RD W S+I YS
Sbjct: 164 HCYVLQRGFNSDVFALNALITCYCRC---GRIEMARKVFDKM--MQRDIVTWNSMIGGYS 218
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
+S + RL+ +M G + + PN+ SV +A + + LG +H
Sbjct: 219 QSGFYEECKRLYLEM---LGVEGIV-------PNAVTIVSVMQACGQSKDLI-LGIEVHC 267
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQN---- 625
+KE I DV + A++ MYAKC D A+K+FDEM ++ V++ +++SGY+ N
Sbjct: 268 -FMKEKGIEIDVSLCNAVIAMYAKCGCLDYARKLFDEMSEKDEVSYGSIISGYMVNGFVD 326
Query: 626 -------GMENFGLNLFLEMTGSEV---------------------YLPDEFTVATVLMG 721
GMEN GL+ + + V P+ T+A++L
Sbjct: 327 KALDVLKGMENPGLSTWNAVISGMVQNDQFEGVFDLVREMQEFGFKLKPNAVTLASILPL 386
Query: 722 CAQVQDLVLGMQIHGYAI 775
+L G ++HGYA+
Sbjct: 387 FPYFSNLRGGKEVHGYAV 404
Score = 67.0 bits (162), Expect = 7e-09
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Frame = +2
Query: 251 WASIICAYSRSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQ 430
W ++I +++Q L +M+ +PN+ S+ + P
Sbjct: 343 WNAVISGMVQNDQFEGVFDLVREMQEF---------GFKLKPNAVTLASI---LPLFPYF 390
Query: 431 ASL--GQALHAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAM 604
++L G+ +H + ++ + ++++V TA++DMYAK A++VFD + R+L+ W AM
Sbjct: 391 SNLRGGKEVHGYAVRRSY-DQNIYVVTAVIDMYAKLGFIHVARRVFDRLQSRSLIIWTAM 449
Query: 605 LSGYVQNGMENFGLNLFLEMTGSEVYLPDEFTVATVLMGCA 727
+S Y +G + L L+ +M + PD T+ +VL CA
Sbjct: 450 ISAYAAHGDASLALGLYDQMLDRGI-RPDPVTLTSVLTACA 489
>ref|XP_004497436.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cicer arietinum]
Length = 677
Score = 129 bits (324), Expect = 1e-27
Identities = 77/234 (32%), Positives = 127/234 (54%), Gaps = 12/234 (5%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
HARL + + ASKLI YA S N + + VF+++P + T + +++ AYS
Sbjct: 56 HARLFLFSITPNNFLASKLITFYAKS---NLTREARSVFDKIPHK--STFSFNAMLIAYS 110
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLG----- 442
+ H AL LFS D+ +SP +++ T + +A+AS+ +S
Sbjct: 111 SKSLFHDALNLFSSFVS--STDTGVSP------DNFTVTCILKALASSSSSSSSSSSSSS 162
Query: 443 -------QALHAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNA 601
+A+H ++++ GF DVF AL+ Y +C + A+KVFD+M R++VTWN+
Sbjct: 163 SSCFESAKAIHCYVLQRGF-NSDVFALNALITCYCRCGRIEMARKVFDKMMQRDIVTWNS 221
Query: 602 MLSGYVQNGMENFGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIH 763
M+ GY Q+G L+LEM G E +P+ T+ +V+ C Q +DL+LG+++H
Sbjct: 222 MIGGYSQSGFYEECKRLYLEMLGVEGIVPNAVTIVSVMQACGQSKDLILGIEVH 275
Score = 77.0 bits (188), Expect = 7e-12
Identities = 69/258 (26%), Positives = 117/258 (45%), Gaps = 32/258 (12%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
H +++ G N+D + LI Y + ++VF+++ RD W S+I YS
Sbjct: 173 HCYVLQRGFNSDVFALNALITCYCRC---GRIEMARKVFDKM--MQRDIVTWNSMIGGYS 227
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
+S + RL+ +M G + + PN+ SV +A + + LG +H
Sbjct: 228 QSGFYEECKRLYLEM---LGVEGIV-------PNAVTIVSVMQACGQSKDLI-LGIEVHC 276
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQN---- 625
+KE I DV + A++ MYAKC D A+K+FDEM ++ V++ +++SGY+ N
Sbjct: 277 -FMKEKGIEIDVSLCNAVIAMYAKCGCLDYARKLFDEMSEKDEVSYGSIISGYMVNGFVD 335
Query: 626 -------GMENFGLNLFLEMTGSEV---------------------YLPDEFTVATVLMG 721
GMEN GL+ + + V P+ T+A++L
Sbjct: 336 KALDVLKGMENPGLSTWNAVISGMVQNDQFEGVFDLVREMQEFGFKLKPNAVTLASILPL 395
Query: 722 CAQVQDLVLGMQIHGYAI 775
+L G ++HGYA+
Sbjct: 396 FPYFSNLRGGKEVHGYAV 413
Score = 67.0 bits (162), Expect = 7e-09
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Frame = +2
Query: 251 WASIICAYSRSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQ 430
W ++I +++Q L +M+ +PN+ S+ + P
Sbjct: 352 WNAVISGMVQNDQFEGVFDLVREMQEF---------GFKLKPNAVTLASI---LPLFPYF 399
Query: 431 ASL--GQALHAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAM 604
++L G+ +H + ++ + ++++V TA++DMYAK A++VFD + R+L+ W AM
Sbjct: 400 SNLRGGKEVHGYAVRRSY-DQNIYVVTAVIDMYAKLGFIHVARRVFDRLQSRSLIIWTAM 458
Query: 605 LSGYVQNGMENFGLNLFLEMTGSEVYLPDEFTVATVLMGCA 727
+S Y +G + L L+ +M + PD T+ +VL CA
Sbjct: 459 ISAYAAHGDASLALGLYDQMLDRGI-RPDPVTLTSVLTACA 498
>ref|XP_004246924.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Solanum lycopersicum]
Length = 651
Score = 129 bits (323), Expect = 1e-27
Identities = 78/226 (34%), Positives = 125/226 (55%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
HARL+ ASKLI Y+ + L + VF+++P R +T W +++ YS
Sbjct: 42 HARLVLSSTIPSNFLASKLINFYSRN---EHLKEAHHVFDEIPER--NTFSWNALLIGYS 96
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
N + L+LFS + +++ +P + +P+++ T V +A++ + L + +H
Sbjct: 97 SKNYHVETLKLFS----LFLSENFETP--HVKPDNFTVTCVLKAVSGVLGDSVLAKMIHC 150
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
+++K GF DV+V L+D Y+K AK VFDE+P R++V+WN+M+SGY Q G
Sbjct: 151 YVLKNGF-DSDVYVLNGLIDSYSKTGDLVLAKNVFDEVPERDVVSWNSMISGYFQCGFYE 209
Query: 638 FGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHGYAI 775
L+ EM E + P TV +VL CAQ DL+LGM++H Y I
Sbjct: 210 ECKGLYREMLHLEKFRPGGVTVVSVLQACAQSNDLMLGMEVHRYVI 255
Score = 79.3 bits (194), Expect = 1e-12
Identities = 69/256 (26%), Positives = 119/256 (46%), Gaps = 30/256 (11%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
H ++K G ++D + LI +YS TG+ L + VF++VP R D W S+I Y
Sbjct: 149 HCYVLKNGFDSDVYVLNGLID--SYSKTGD-LVLAKNVFDEVPER--DVVSWNSMISGYF 203
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
+ + L+ +M RP SV +A A + + LG +H
Sbjct: 204 QCGFYEECKGLYREMLH----------LEKFRPGGVTVVSVLQACAQSND-LMLGMEVHR 252
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
++I+ G I D+ V ++V +Y+KC + D A+K+F+EM + +T+ AM+SGY+ G +
Sbjct: 253 YVIENG-IELDIAVYNSIVALYSKCGSLDYARKLFEEMDGPDEITYGAMISGYMIYGFVD 311
Query: 638 FGLNLFLE------------MTG---SEVY---------------LPDEFTVATVLMGCA 727
+N F E +TG + +Y P+ T++++L G +
Sbjct: 312 QAVNFFQEIDKPCLSTWNAVITGLVQNNLYEQALEFVRKMQLSGDQPNAVTLSSILPGIS 371
Query: 728 QVQDLVLGMQIHGYAI 775
+ G ++H YAI
Sbjct: 372 DLSFAKGGKEVHAYAI 387
Score = 66.6 bits (161), Expect = 9e-09
Identities = 45/159 (28%), Positives = 74/159 (46%)
Frame = +2
Query: 251 WASIICAYSRSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQ 430
W ++I ++N +AL M+ +PN+ +S+ I+
Sbjct: 328 WNAVITGLVQNNLYEQALEFVRKMQLS-----------GDQPNAVTLSSILPGISDL-SF 375
Query: 431 ASLGQALHAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLS 610
A G+ +HA+ IK ++++V T ++D YAK SA++VFD R+++ W A++S
Sbjct: 376 AKGGKEVHAYAIKSD-CNQNIYVATGVIDTYAKLGFIQSARRVFDHTNDRSVIIWTAIIS 434
Query: 611 GYVQNGMENFGLNLFLEMTGSEVYLPDEFTVATVLMGCA 727
Y +G L+LF M S PD T VL CA
Sbjct: 435 AYANHGESKAALDLFNVML-SHCIRPDSVTFTAVLAACA 472
>gb|ESW31754.1| hypothetical protein PHAVU_002G264900g [Phaseolus vulgaris]
Length = 846
Score = 128 bits (322), Expect = 2e-27
Identities = 80/228 (35%), Positives = 123/228 (53%), Gaps = 2/228 (0%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
HA ++ LG + V + +AYS N+LS Q++F+ +P R + W+S++ Y+
Sbjct: 71 HAHIVVLGFHQHDVFLVNTLL-HAYSKL-NNLSDAQKLFDTMPNR--NLVSWSSMVSMYT 126
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQAL-- 451
R +AL LF RR D PN Y+ SV +A + SL QAL
Sbjct: 127 RHGYSVEALVLFCRFRRSCSED----------PNEYILASVIKACT---QLGSLSQALLV 173
Query: 452 HAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGM 631
H I+K GF+ +DV+V T+L+D YAK D A+ +FD + + VTW A+++GY + G
Sbjct: 174 HGFIVKGGFV-QDVYVGTSLIDFYAKHGCVDDARLIFDGLKVKTTVTWTAIIAGYAKFGR 232
Query: 632 ENFGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHGYAI 775
L LF +M +VY PD + +++VL C+ ++ L G QIHGY +
Sbjct: 233 SEVSLKLFYQMREGDVY-PDRYVISSVLSACSMLEFLEGGRQIHGYVL 279
Score = 104 bits (259), Expect = 4e-20
Identities = 65/226 (28%), Positives = 113/226 (50%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
H ++K G D + LI YA + + +F+ + +++ T W +II Y+
Sbjct: 174 HGFIVKGGFVQDVYVGTSLIDFYAKH---GCVDDARLIFDGL--KVKTTVTWTAIIAGYA 228
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
+ + +L+LF MR + P+ YV +SV A S E G+ +H
Sbjct: 229 KFGRSEVSLKLFYQMREG-----------DVYPDRYVISSVLSA-CSMLEFLEGGRQIHG 276
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
++++ GF DV V ++D+Y KC + +K+FD++ +++V+W M++G +QN
Sbjct: 277 YVLRRGF-DIDVSVVNGIIDLYLKCHKVKTGRKLFDQLVDKDVVSWTTMIAGCMQNSFHG 335
Query: 638 FGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHGYAI 775
+ ++LF+EM E PD F +VL C +Q G Q+H YAI
Sbjct: 336 YAMDLFVEMI-REGLKPDAFACTSVLNSCGTLQAQEKGRQVHAYAI 380
Score = 88.2 bits (217), Expect = 3e-15
Identities = 72/226 (31%), Positives = 110/226 (48%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
HA IK+ ++ D + +I YA +SL+ ++VF+ V + + ++I YS
Sbjct: 376 HAYAIKVNIDNDDFVKNGVIDMYAKC---DSLTNARKVFDLVA--AINVVSYNAMIEGYS 430
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
R N +AL LF +MR S+SP P F S+ AS L +H
Sbjct: 431 RHNMLVEALDLFHEMRL------SLSP-----PTLLTFVSLLGLSASL-FLLELSSQIHC 478
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
I K G D F +AL+D+Y+KC+ A+ VF+E+ +++V WNAM SGY Q
Sbjct: 479 LITKYG-ASLDNFAGSALIDVYSKCSCVGDARLVFEEVYDKDIVVWNAMFSGYSQQSENE 537
Query: 638 FGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHGYAI 775
L L+ ++ S + P+EFT A V+ + + L G Q H I
Sbjct: 538 ESLKLYKDLQISRL-KPNEFTFAAVITAASNMASLRHGQQFHNQVI 582
Score = 87.8 bits (216), Expect = 4e-15
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 4/222 (1%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
H + K G + D S LI Y+ + + + VFE+V + D +W ++ YS
Sbjct: 477 HCLITKYGASLDNFAGSALIDVYSKC---SCVGDARLVFEEVYDK--DIVVWNAMFSGYS 531
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASL--GQAL 451
+ ++ ++L+L+ D++ +PN + F +V I +A ASL GQ
Sbjct: 532 QQSENEESLKLYKDLQ-----------ISRLKPNEFTFAAV---ITAASNMASLRHGQQF 577
Query: 452 HAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGM 631
H +IK G D FV +LVDMYAKC + + + K F R++ WN+M+S Y +G
Sbjct: 578 HNQVIKMGLYD-DSFVTNSLVDMYAKCGSIEESHKTFISTNQRDIACWNSMISTYAHHGE 636
Query: 632 ENFGLNLF--LEMTGSEVYLPDEFTVATVLMGCAQVQDLVLG 751
L +F L M G++ P+ T VL C+ L LG
Sbjct: 637 AAKALEVFEDLIMEGAK---PNYVTYVGVLSACSHAGLLDLG 675
Score = 80.1 bits (196), Expect = 8e-13
Identities = 40/109 (36%), Positives = 63/109 (57%)
Frame = +2
Query: 449 LHAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNG 628
+HAHI+ GF DVF+ L+ Y+K A+K+FD MP RNLV+W++M+S Y ++G
Sbjct: 70 IHAHIVVLGFHQHDVFLVNTLLHAYSKLNNLSDAQKLFDTMPNRNLVSWSSMVSMYTRHG 129
Query: 629 MENFGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHGYAI 775
L LF S P+E+ +A+V+ C Q+ L + +HG+ +
Sbjct: 130 YSVEALVLFCRFRRSCSEDPNEYILASVIKACTQLGSLSQALLVHGFIV 178
Score = 76.6 bits (187), Expect = 9e-12
Identities = 63/222 (28%), Positives = 111/222 (50%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
H +++ G + D + +I Y + + +++F+Q+ + D W ++I
Sbjct: 275 HGYVLRRGFDIDVSVVNGIIDLYLKC---HKVKTGRKLFDQLVDK--DVVSWTTMIAGCM 329
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
+++ A+ LF +M R +P+++ TSV + + Q G+ +HA
Sbjct: 330 QNSFHGYAMDLFVEMIRE-----------GLKPDAFACTSVLNSCGTLQAQEK-GRQVHA 377
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
+ IK I D FV+ ++DMYAKC + +A+KVFD + N+V++NAM+ GY ++ M
Sbjct: 378 YAIKVN-IDNDDFVKNGVIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRHNMLV 436
Query: 638 FGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIH 763
L+LF EM S + P T ++L A + L L QIH
Sbjct: 437 EALDLFHEMRLS-LSPPTLLTFVSLLGLSASLFLLELSSQIH 477
>ref|XP_006305855.1| hypothetical protein CARUB_v10010934mg [Capsella rubella]
gi|482574566|gb|EOA38753.1| hypothetical protein
CARUB_v10010934mg [Capsella rubella]
Length = 574
Score = 128 bits (322), Expect = 2e-27
Identities = 79/226 (34%), Positives = 121/226 (53%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
HA ++K GL +D + LI+ Y+ S + S+V E +D W ++I +
Sbjct: 126 HAHIVKFGLESDPYVRNSLISGYSSSGLFDFASRVFDGTED-----KDVVSWTAMIDGFV 180
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
R+ +A+ F +M+ T N SV A A A + G+++H
Sbjct: 181 RNGFASEAMAYFVEMKN-----------TGTAANEMTVVSVLSATAKAAD-VRFGKSVHG 228
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
++ G + DVF+ ++LVD Y KC D A+KVFDEMP RN+VTW A+++GYVQ +
Sbjct: 229 FYLETGRVKCDVFIGSSLVDFYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFD 288
Query: 638 FGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHGYAI 775
GL++F EM S+V +P+E T++ VL CA V L LG ++H Y I
Sbjct: 289 KGLSVFEEMIESDV-VPNEKTLSIVLSACAHVGALHLGRRVHCYVI 333
Score = 79.7 bits (195), Expect = 1e-12
Identities = 54/175 (30%), Positives = 88/175 (50%)
Frame = +2
Query: 203 QQVFEQVPFRLRDTALWASIICAYSRSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNS 382
Q+VF+++P R + W ++I Y + K L +F +M +S + P N + S
Sbjct: 260 QKVFDEMPSR--NVVTWTALIAGYVQGRCFDKGLSVFEEMI-----ESDVVP--NEKTLS 310
Query: 383 YVFTSVARAIASAPEQASLGQALHAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVF 562
V ++ A A LG+ +H ++IK I + + T L+D+YAKC + A VF
Sbjct: 311 IVLSACAHVGA-----LHLGRRVHCYVIKNS-IEINTTMGTTLIDLYAKCGCLEEAILVF 364
Query: 563 DEMPYRNLVTWNAMLSGYVQNGMENFGLNLFLEMTGSEVYLPDEFTVATVLMGCA 727
+ +P +N+ TW AM++G +G ++LF M S P+E T VL CA
Sbjct: 365 ERLPEKNVYTWTAMINGLAAHGHARGAVDLFQTMLRSHT-SPNEVTFIAVLSACA 418
>ref|XP_006838295.1| hypothetical protein AMTR_s00103p00113040 [Amborella trichopoda]
gi|548840763|gb|ERN00864.1| hypothetical protein
AMTR_s00103p00113040 [Amborella trichopoda]
Length = 391
Score = 128 bits (321), Expect = 2e-27
Identities = 69/189 (36%), Positives = 111/189 (58%)
Frame = +2
Query: 209 VFEQVPFRLRDTALWASIICAYSRSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYV 388
+F+++P R T W ++I AY+ N P +AL L+ M H T P++Y
Sbjct: 1 MFDKMPQRA--TLSWNAMISAYTHQNMPREALSLYMSMLSH-----------QTPPDTYT 47
Query: 389 FTSVARAIASAPEQASLGQALHAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDE 568
F S+ RAIA ++ + HAH++ G P +++VE++LVDMYAKC + +++K+FD
Sbjct: 48 FASLFRAIAGLT-CLTMARTAHAHLLVLGSKP-NIYVESSLVDMYAKCGSIANSRKIFDS 105
Query: 569 MPYRNLVTWNAMLSGYVQNGMENFGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVL 748
M R+++ W AM+ G Q+G+++ L LF EM GS P+ FT+A+VL+ C L +
Sbjct: 106 MVQRDVIAWTAMIVGCTQSGLDSEALVLFSEMVGSCAQAPNGFTLASVLIACGNAYALFM 165
Query: 749 GMQIHGYAI 775
G Q H +A+
Sbjct: 166 GTQAHAFAV 174
Score = 88.6 bits (218), Expect = 2e-15
Identities = 68/226 (30%), Positives = 111/226 (49%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
HA L+ LG + S L+ YA S++ +++F+ + RD W ++I +
Sbjct: 68 HAHLLVLGSKPNIYVESSLVDMYAKC---GSIANSRKIFDSMV--QRDVIAWTAMIVGCT 122
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
+S +AL LFS+M S + A PN + SV A +A +G HA
Sbjct: 123 QSGLDSEALVLFSEMV------GSCAQA----PNGFTLASVLIACGNA-YALFMGTQAHA 171
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
+K G + + V T+LV MYAK + + F+ N+V+W AM++G VQN +
Sbjct: 172 FAVKAG-LDQGVTTRTSLVAMYAKLGLIQESHRAFEGFLEANVVSWTAMIAGLVQNEHHD 230
Query: 638 FGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHGYAI 775
L +F +M + + P+EFT++T+L CA L G Q+H ++
Sbjct: 231 LALWVFQDMLLTTLR-PNEFTLSTILRACACTALLRAGCQVHSLSV 275
Score = 79.7 bits (195), Expect = 1e-12
Identities = 61/210 (29%), Positives = 96/210 (45%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
HA +K GL+ + L+A YA + + + FE F + W ++I
Sbjct: 170 HAFAVKAGLDQGVTTRTSLVAMYAKL---GLIQESHRAFEG--FLEANVVSWTAMIAGLV 224
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
++ AL +F DM RPN + +++ RA A + G +H+
Sbjct: 225 QNEHHDLALWVFQDML-----------LTTLRPNEFTLSTILRACACTALLRA-GCQVHS 272
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
++ GF K + ALVDMYAKC A+ +FD + +R++V NAM++GY NG
Sbjct: 273 LSVRLGFESKS-YTGVALVDMYAKCGCVVEARVLFDGLAFRDVVLMNAMITGYGHNGQAR 331
Query: 638 FGLNLFLEMTGSEVYLPDEFTVATVLMGCA 727
L LF EM G+ P+ T +L C+
Sbjct: 332 EALQLFKEM-GAFGLRPNSTTFVGLLSSCS 360
>ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548606|gb|EEF50097.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 716
Score = 127 bits (320), Expect = 3e-27
Identities = 76/202 (37%), Positives = 117/202 (57%)
Frame = +2
Query: 170 YSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYSRSNQPHKALRLFSDMRRHYGNDSS 349
Y+ G++ + V +VFE++P D W+ +I Y++SNQ +A+ LF MRR +
Sbjct: 187 YTKFGDA-NDVLRVFEEMP--KHDVIPWSFMISRYAQSNQSREAVELFGQMRRAF----- 238
Query: 350 ISPALNTRPNSYVFTSVARAIASAPEQASLGQALHAHIIKEGFIPKDVFVETALVDMYAK 529
PN + F SV ++ AS E LG+ +H H++K G + +VFV AL+D+YAK
Sbjct: 239 ------VLPNQFTFASVLQSCASI-ENLQLGKQVHCHVLKVG-LDGNVFVSNALMDVYAK 290
Query: 530 CAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMENFGLNLFLEMTGSEVYLPDEFTVAT 709
C D++ K+F E+P RN VTWN M+ GYVQ+G + L+L+ M +V E T ++
Sbjct: 291 CGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQ-ASEVTYSS 349
Query: 710 VLMGCAQVQDLVLGMQIHGYAI 775
VL CA + + LG QIH ++
Sbjct: 350 VLRACASLAAMELGTQIHSLSL 371
Score = 109 bits (272), Expect = 1e-21
Identities = 66/226 (29%), Positives = 120/226 (53%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
HA + KLG ++A + LI YA + NS +Q F+ + +D W ++ Y+
Sbjct: 64 HACIYKLGHESNAFVGTALIDAYAVCGSVNS---ARQAFDAIA--CKDMVSWTGMVACYA 118
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
+++ +L+LF++MR + PN + F V +A E S+G+++H
Sbjct: 119 ENDRFQDSLQLFAEMRM-----------VGFNPNHFTFAGVLKACIGL-EAFSVGKSVHG 166
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
++K + D++V L+D+Y K + +VF+EMP +++ W+ M+S Y Q+
Sbjct: 167 CVLKTCY-EMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSR 225
Query: 638 FGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHGYAI 775
+ LF +M + V LP++FT A+VL CA +++L LG Q+H + +
Sbjct: 226 EAVELFGQMRRAFV-LPNQFTFASVLQSCASIENLQLGKQVHCHVL 270
Score = 94.4 bits (233), Expect = 4e-17
Identities = 67/218 (30%), Positives = 111/218 (50%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
H ++K+GL+ + ++ L+ YA L ++F ++P R T W ++I Y
Sbjct: 266 HCHVLKVGLDGNVFVSNALMDVYAKC---GRLDNSMKLFMELPNRNEVT--WNTMIVGYV 320
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
+S KAL L+ +M S ++ ++SV RA AS LG +H+
Sbjct: 321 QSGDGDKALSLYKNMLECQVQASEVT-----------YSSVLRACASLAAM-ELGTQIHS 368
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
+K + KDV V AL+DMYAKC + +A+ VFD + R+ ++WNAM+SGY +G+
Sbjct: 369 LSLKTIY-DKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVG 427
Query: 638 FGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLG 751
L F M +E +P++ T ++L C+ L +G
Sbjct: 428 EALKAFQMMQETEC-VPNKLTFVSILSACSNAGLLDIG 464
Score = 87.8 bits (216), Expect = 4e-15
Identities = 58/177 (32%), Positives = 94/177 (53%)
Frame = +2
Query: 236 RDTALWASIICAYSRSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIA 415
R+T + ++I Y +S Q + + LFS + R G++ N +VFT++ + +
Sbjct: 4 RNTVSFVTLIQGYVQSFQLDEVVDLFSRVHRE-GHEL----------NPFVFTTILKLLV 52
Query: 416 SAPEQASLGQALHAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTW 595
S E A L +LHA I K G + FV TAL+D YA C + +SA++ FD + +++V+W
Sbjct: 53 SV-ECAELAYSLHACIYKLGH-ESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSW 110
Query: 596 NAMLSGYVQNGMENFGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHG 766
M++ Y +N L LF EM + P+ FT A VL C ++ +G +HG
Sbjct: 111 TGMVACYAENDRFQDSLQLFAEMR-MVGFNPNHFTFAGVLKACIGLEAFSVGKSVHG 166
>ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535508|gb|EEF37177.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 654
Score = 127 bits (319), Expect = 4e-27
Identities = 77/227 (33%), Positives = 125/227 (55%), Gaps = 1/227 (0%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
HARLI + + ASKL+A Y+ + N L+ + VF+Q+P + +T + +++ +YS
Sbjct: 47 HARLILFSVTPENYLASKLVALYSKT---NHLAFARYVFDQIPHK--NTFSYNAMLISYS 101
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAP-EQASLGQALH 454
N+ AL LFS + A + N+ T + ++++S LG+ +H
Sbjct: 102 LHNRHGDALDLFSSL------------ASSNLVNNISITCLLKSLSSFTLSDVKLGKEVH 149
Query: 455 AHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGME 634
+++ GF DVFVE AL+ Y+KC D ++KVFD M R++V+WN+M+SGY Q G+
Sbjct: 150 GFVLRTGF-DADVFVENALITYYSKCYDLDLSRKVFDRMTKRDVVSWNSMISGYSQGGLY 208
Query: 635 NFGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHGYAI 775
L+ EM + P+ TV +VL C Q QDL GM++H + +
Sbjct: 209 EDCKTLYREMVDFSGFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIV 255
Score = 82.8 bits (203), Expect = 1e-13
Identities = 53/159 (33%), Positives = 81/159 (50%)
Frame = +2
Query: 251 WASIICAYSRSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQ 430
W ++I ++N+ L L +M+ AL RPN+ +SV IA
Sbjct: 328 WNAVITGLVQNNRHEGVLDLVREMQ-----------ALGFRPNAVTLSSVLSTIAYFSSL 376
Query: 431 ASLGQALHAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLS 610
G+ +H++ IK G+ ++++V TA++DMYAK A++VFD+ R+LV W A++S
Sbjct: 377 KG-GKEIHSYAIKIGY-HRNIYVATAIIDMYAKSGYLRGAQRVFDQSKDRSLVIWTAIIS 434
Query: 611 GYVQNGMENFGLNLFLEMTGSEVYLPDEFTVATVLMGCA 727
Y +G N L LF EM + PD T VL CA
Sbjct: 435 AYAVHGDANLALGLFHEMLKQGIQ-PDPVTFTAVLAACA 472
Score = 77.8 bits (190), Expect = 4e-12
Identities = 70/257 (27%), Positives = 110/257 (42%), Gaps = 31/257 (12%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
H +++ G +AD + LI Y+ L ++VF+++ RD W S+I YS
Sbjct: 149 HGFVLRTGFDADVFVENALITYYSKC---YDLDLSRKVFDRMT--KRDVVSWNSMISGYS 203
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
+ L+ D + Y S RPN SV +A + A G +H
Sbjct: 204 QGG-------LYEDCKTLYREMVDFS---GFRPNGVTVVSVLQACGQTQDLA-FGMEVHK 252
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRN------------------ 583
I+ + + D+ V AL+ +YAKC + D A+++FDEM ++
Sbjct: 253 FIV-DNQVEIDISVCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGLMLHGYVD 311
Query: 584 -------------LVTWNAMLSGYVQNGMENFGLNLFLEMTGSEVYLPDEFTVATVLMGC 724
L TWNA+++G VQN L+L EM + P+ T+++VL
Sbjct: 312 QSLELFRGMKTQILSTWNAVITGLVQNNRHEGVLDLVREMQALG-FRPNAVTLSSVLSTI 370
Query: 725 AQVQDLVLGMQIHGYAI 775
A L G +IH YAI
Sbjct: 371 AYFSSLKGGKEIHSYAI 387
>ref|XP_002308496.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222854472|gb|EEE92019.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 621
Score = 126 bits (317), Expect = 7e-27
Identities = 72/228 (31%), Positives = 126/228 (55%), Gaps = 2/228 (0%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
HARL+ D ++LI Y+ + + + VF+Q+P + +T + +++ AY+
Sbjct: 40 HARLLLSSSTLDNYLGARLINLYSKT---KHIHHARHVFDQIPHK--NTFSYNALLIAYT 94
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASA--PEQASLGQAL 451
+N + + LFS + +S + + +PN+Y T + ++++S LG+ +
Sbjct: 95 MNNHHKETINLFSSLL--------LSSSGDLQPNNYSITCLLKSLSSLLMVTDVCLGKEI 146
Query: 452 HAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGM 631
H +++ G + +DVFVE AL+ Y+KC A+K+FD+M R++VTWN+M++GY Q G
Sbjct: 147 HCFVLRRGLV-EDVFVENALISFYSKCLGVGFARKLFDKMRERDVVTWNSMIAGYAQAGF 205
Query: 632 ENFGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHGYAI 775
L+ EM + P+ TV +VL C Q QDLV GM++H Y +
Sbjct: 206 FKECKELYREMGALPGFKPNAVTVLSVLQACMQSQDLVFGMEVHRYIV 253
Score = 81.3 bits (199), Expect = 4e-13
Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 30/256 (11%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
H +++ GL D + LI+ Y+ + +++F+++ R RD W S+I Y+
Sbjct: 147 HCFVLRRGLVEDVFVENALISFYSKCL---GVGFARKLFDKM--RERDVVTWNSMIAGYA 201
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
++ + L+ +M G +PN+ SV +A + + G +H
Sbjct: 202 QAGFFKECKELYREMGALPG----------FKPNAVTVLSVLQACMQSQDLV-FGMEVHR 250
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
+I+ + + DV V AL+ +YAKC + D A+++FDEM ++ VT+ A++SGY+ +G+ +
Sbjct: 251 YIV-DNKVELDVLVCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGYMAHGVVD 309
Query: 638 FGLNLFLEMTGSEV------------------------------YLPDEFTVATVLMGCA 727
G+ LF EM + + P+ T+++VL +
Sbjct: 310 KGMELFREMKSRVLSTWNAVISGLVQNNRHEGVVDLVREMQGLGFRPNAVTLSSVLPTLS 369
Query: 728 QVQDLVLGMQIHGYAI 775
+L G +IHGYA+
Sbjct: 370 YFSNLKGGKEIHGYAV 385
Score = 78.2 bits (191), Expect = 3e-12
Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 20/233 (8%)
Frame = +2
Query: 89 MNRHARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIIC 268
M H ++ + D + + LI YA SL +++F+++ + D + +II
Sbjct: 246 MEVHRYIVDNKVELDVLVCNALIGLYAKC---GSLDYARELFDEMSEK--DEVTYGAIIS 300
Query: 269 AYSRSNQPHKALRLFSDMR------------------RHYGNDSSISP--ALNTRPNSYV 388
Y K + LF +M+ RH G + L RPN+
Sbjct: 301 GYMAHGVVDKGMELFREMKSRVLSTWNAVISGLVQNNRHEGVVDLVREMQGLGFRPNAVT 360
Query: 389 FTSVARAIASAPEQASLGQALHAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDE 568
+SV ++ G+ +H + +K G+ ++++V TA++D YAK A+ VFD+
Sbjct: 361 LSSVLPTLSYFSNLKG-GKEIHGYAVKNGY-DRNIYVATAIIDTYAKLGFLFGAQYVFDQ 418
Query: 569 MPYRNLVTWNAMLSGYVQNGMENFGLNLFLEMTGSEVYLPDEFTVATVLMGCA 727
R+L+ W A++S + +G N L F EM + + PD T VL CA
Sbjct: 419 SKERSLIIWTAIISAHAAHGDANSALTFFDEMLSNGIQ-PDHVTFTAVLAACA 470
>gb|EXB23431.1| hypothetical protein L484_005720 [Morus notabilis]
Length = 633
Score = 126 bits (316), Expect = 9e-27
Identities = 76/224 (33%), Positives = 121/224 (54%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
HARL+ + ASKLI Y+ S + + +QVF+Q+P R +T W +++ AYS
Sbjct: 58 HARLVVSSVVPGNFLASKLIGFYSKS---DCIDYARQVFDQIPHR--NTFSWNAMLIAYS 112
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
AL LFS + S + + +++ T V +A+A + L + +H
Sbjct: 113 LHGLQFDALNLFSSLVS--------SRSSGVKADNFTVTCVMKALAELFSDSRLAKEVHC 164
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
++++ GF D+FV ALV YA+C A+ FD MP R++V+WN+M+SGY Q G+
Sbjct: 165 YVVRHGF-DLDIFVVNALVTCYARCDELGVARVFFDRMPERDIVSWNSMISGYSQGGLYL 223
Query: 638 FGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHGY 769
L+ EM G + P+ TV +VL C Q +DLV G+++H +
Sbjct: 224 ECKKLYREMLGLKELRPNAVTVLSVLQACGQSKDLVFGIEVHRF 267
Score = 79.3 bits (194), Expect = 1e-12
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 1/200 (0%)
Frame = +2
Query: 131 DAVHASKLIAEY-AYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYSRSNQPHKALR 307
D V +I+ Y AY N++ +F++V + + W ++I ++NQ + L
Sbjct: 307 DEVTYGSMISGYMAYGFFDNAMD----LFDKV--KKSGLSTWNAVISGLLQNNQHERVLD 360
Query: 308 LFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHAHIIKEGFIPK 487
LF M+ A RPN+ +SV I+ G+ +HA+ ++ + +
Sbjct: 361 LFLAMQ-----------ASGFRPNTVTLSSVLPTISHFSYLKG-GKEIHAYALRSSY-DQ 407
Query: 488 DVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMENFGLNLFLEMT 667
+++V TA++D YAK A++VFD+ R+L+ W A++S Y +G L+LF EM
Sbjct: 408 NIYVSTAIIDAYAKSGYLHGARRVFDQSRGRSLIIWTAIISAYAAHGDVETSLHLFDEMV 467
Query: 668 GSEVYLPDEFTVATVLMGCA 727
+ + PDE T VL CA
Sbjct: 468 NNGI-RPDEVTFTAVLTSCA 486
Score = 72.0 bits (175), Expect = 2e-10
Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
H +++ G + D + L+ YA + L + F+++P R D W S+I YS
Sbjct: 163 HCYVVRHGFDLDIFVVNALVTCYARC---DELGVARVFFDRMPER--DIVSWNSMISGYS 217
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
+ + +L+ +M RPN+ SV +A + + G +H
Sbjct: 218 QGGLYLECKKLYREMLG----------LKELRPNAVTVLSVLQACGQSKDLV-FGIEVH- 265
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVF------DEMPYRNLV---------- 589
+ E I D+ + ALV +YAKC + D A++ F DE+ Y +++
Sbjct: 266 RFMNENRIKMDISLCNALVALYAKCGSLDYAREFFEGLKEKDEVTYGSMISGYMAYGFFD 325
Query: 590 ---------------TWNAMLSGYVQNGMENFGLNLFLEMTGSEVYLPDEFTVATVLMGC 724
TWNA++SG +QN L+LFL M S + P+ T+++VL
Sbjct: 326 NAMDLFDKVKKSGLSTWNAVISGLLQNNQHERVLDLFLAMQASG-FRPNTVTLSSVLPTI 384
Query: 725 AQVQDLVLGMQIHGYAI 775
+ L G +IH YA+
Sbjct: 385 SHFSYLKGGKEIHAYAL 401
>ref|XP_004987089.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Setaria italica]
Length = 636
Score = 126 bits (316), Expect = 9e-27
Identities = 79/212 (37%), Positives = 113/212 (53%)
Frame = +2
Query: 131 DAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYSRSNQPHKALRL 310
D + L+A A SP G L+ + +F+++P RD W++I+ A++R QP AL L
Sbjct: 92 DVCSYNTLVAALARSPRG--LASARALFDRMP--RRDHFSWSAIVSAHARHGQPRAALAL 147
Query: 311 FSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHAHIIKEGFIPKD 490
+ M R G+ + N + +S A A+A A G+ LH H+++ G I D
Sbjct: 148 YRRMLREPGSAGA--------DNEFTASSALTA-ATAARCARAGRELHCHVVRRG-IDAD 197
Query: 491 VFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMENFGLNLFLEMTG 670
V +AL DMYAKC D A+ VFD MP R++V+W AM+ Y G G LF+ M
Sbjct: 198 AVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDAGRGGEGFRLFVHMLW 257
Query: 671 SEVYLPDEFTVATVLMGCAQVQDLVLGMQIHG 766
S + P+EFT A VL CA+ LG Q+HG
Sbjct: 258 SGI-RPNEFTYAGVLRACAEFTSEKLGRQVHG 288
Score = 91.7 bits (226), Expect = 3e-16
Identities = 64/221 (28%), Positives = 106/221 (47%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
H +++ G++ADAV S L YA + + VF+++P +RD W +++ Y
Sbjct: 186 HCHVVRRGIDADAVVWSALADMYAKC---GRVDDARSVFDRMP--VRDVVSWTAMVERYF 240
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
+ + + RLF M RPN + + V RA A + LG+ +H
Sbjct: 241 DAGRGGEGFRLFVHMLWS-----------GIRPNEFTYAGVLRACAEFTSE-KLGRQVHG 288
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
+ K F E+AL++MY+KC +A +VF+ MP +LV+ A++SGY QNG
Sbjct: 289 RMAKSR-AGDSCFAESALMNMYSKCGDMGAAMRVFEVMPKPDLVSRTAVISGYAQNGQPE 347
Query: 638 FGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQI 760
L F ++ ++PD T VL CA + G+++
Sbjct: 348 EALRYF-DLFLRSGFMPDHVTFVGVLSACAHAGLVNKGLEV 387
>ref|XP_006844488.1| hypothetical protein AMTR_s00016p00115350 [Amborella trichopoda]
gi|548846959|gb|ERN06163.1| hypothetical protein
AMTR_s00016p00115350 [Amborella trichopoda]
Length = 396
Score = 125 bits (315), Expect = 1e-26
Identities = 75/204 (36%), Positives = 113/204 (55%), Gaps = 2/204 (0%)
Frame = +2
Query: 170 YSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYSRSNQPHKALRLFSDMRRHYGNDSS 349
YS G S+ QVF ++P + ++ W+ ++ A+S++ +AL L SDM
Sbjct: 138 YSKLG-SIVDAFQVFNEMPSK--NSVTWSIMVSAFSQNGFVSEALSLLSDMN-------- 186
Query: 350 ISPALNTRPNSYVFTSVARAIASAPEQASLGQALHAHIIKEGFIPKDVFVETALVDMYAK 529
+ N V+ S+ RA +++P G+ LH+ IIK GFIP D+ +ETAL +MY K
Sbjct: 187 ---VIGISSNQSVYVSLLRACSNSPRGPEPGKQLHSQIIKLGFIP-DLLIETALCNMYIK 242
Query: 530 CAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMENFGLNLF--LEMTGSEVYLPDEFTV 703
C DSAK +FD MP +N VTW A++SGY Q G E L L+ + M G+E PD F
Sbjct: 243 CRELDSAKLIFDNMPEKNAVTWTAVMSGYTQAGKEEAALALYQKILMVGNE---PDGFVF 299
Query: 704 ATVLMGCAQVQDLVLGMQIHGYAI 775
+ +L CA + +L G +H + +
Sbjct: 300 SVILKACAGLNNLKFGKLVHAHIL 323
Score = 83.6 bits (205), Expect = 7e-14
Identities = 55/193 (28%), Positives = 95/193 (49%)
Frame = +2
Query: 77 PSP*MNRHARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWA 256
P P H+++IKLG D + + L Y L + +F+ +P + + W
Sbjct: 211 PEPGKQLHSQIIKLGFIPDLLIETALCNMYIKC---RELDSAKLIFDNMPEK--NAVTWT 265
Query: 257 SIICAYSRSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQAS 436
+++ Y+++ + AL L+ + GN+ P+ +VF+ + +A A
Sbjct: 266 AVMSGYTQAGKEEAALALYQKILM-VGNE----------PDGFVFSVILKACAGL-NNLK 313
Query: 437 LGQALHAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGY 616
G+ +HAHI+K G + K+V V T LVDMY KC + ++VF + N V+W+ +++GY
Sbjct: 314 FGKLVHAHILKLG-MEKEVSVGTPLVDMYFKCGMVEYGRQVFKRISQPNEVSWSVIIAGY 372
Query: 617 VQNGMENFGLNLF 655
Q G L LF
Sbjct: 373 AQVGDVEESLGLF 385
>ref|XP_004305232.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Fragaria vesca subsp. vesca]
Length = 664
Score = 125 bits (315), Expect = 1e-26
Identities = 74/224 (33%), Positives = 116/224 (51%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
HARL+ + ASKLI+ Y + N L Q +VF+++P ++T W +++ YS
Sbjct: 53 HARLLLFSVKPGNFLASKLISFYCRN---NQLKQAHKVFDEIP--QKNTFAWNALLIGYS 107
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
N LRLFS M +S SP +P+++ T V +A+ L + +H
Sbjct: 108 IRNMHTDTLRLFSAMM------ASHSP--EAKPDNFTMTCVMKALGGLFSGTDLAKEVHC 159
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
+++ GF D+FV L+ Y++C A+ +FD MP R++V+WN+M+ GY Q G
Sbjct: 160 FVLRNGF-DSDLFVANCLMTFYSRCDEVGMARALFDRMPERDIVSWNSMIGGYSQAGCYG 218
Query: 638 FGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHGY 769
L+ EM S PD+ T +VL C Q DL GM++H +
Sbjct: 219 ECKELYREMLESVKVRPDDVTAVSVLQACVQSSDLEFGMEVHRF 262
Score = 82.4 bits (202), Expect = 2e-13
Identities = 50/164 (30%), Positives = 85/164 (51%)
Frame = +2
Query: 236 RDTALWASIICAYSRSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIA 415
R + W ++I ++++ A+ L +M+ A +PN+ +SV AI
Sbjct: 332 RSLSTWNAMISGMVQNSRHEAAIDLVREMQ-----------ACGFKPNTVTLSSVLPAI- 379
Query: 416 SAPEQASLGQALHAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTW 595
S +G+ HA+ ++ F +++V TA++D YAK A++VFD+ Y++LV W
Sbjct: 380 SYFSNLKVGKETHAYTVRNNF-DWNIYVATAVIDTYAKSGFLSGAQQVFDQSKYKSLVIW 438
Query: 596 NAMLSGYVQNGMENFGLNLFLEMTGSEVYLPDEFTVATVLMGCA 727
A++S Y +G N + LF +M GS + PDE T VL C+
Sbjct: 439 TAIISAYAAHGDANVSIGLFNKMIGSGIQ-PDEVTFTAVLTACS 481
Score = 75.1 bits (183), Expect = 3e-11
Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
H +++ G ++D A+ L+ Y+ + + + +F+++P R D W S+I YS
Sbjct: 158 HCFVLRNGFDSDLFVANCLMTFYSRC---DEVGMARALFDRMPER--DIVSWNSMIGGYS 212
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
++ + L+ +M ++ RP+ SV +A + + G +H
Sbjct: 213 QAGCYGECKELYREMLE----------SVKVRPDDVTAVSVLQACVQSSD-LEFGMEVH- 260
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFD------------------------ 565
+ E I DV + AL+ +YA+C D A+++FD
Sbjct: 261 RFLNESLIEMDVKLYNALIGLYARCGKFDCARELFDGMSEKDEVTYGSLVSGYMFHGFVD 320
Query: 566 -------EMPYRNLVTWNAMLSGYVQNGMENFGLNLFLEMTGSEVYLPDEFTVATVLMGC 724
E R+L TWNAM+SG VQN ++L EM + P+ T+++VL
Sbjct: 321 KAMDVFRESTNRSLSTWNAMISGMVQNSRHEAAIDLVREMQACG-FKPNTVTLSSVLPAI 379
Query: 725 AQVQDLVLGMQIHGYAI 775
+ +L +G + H Y +
Sbjct: 380 SYFSNLKVGKETHAYTV 396
>ref|XP_006345726.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Solanum tuberosum]
Length = 654
Score = 125 bits (314), Expect = 2e-26
Identities = 77/226 (34%), Positives = 125/226 (55%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
HARL+ + ASKLI Y+ L + VF+++P R +T W +++ YS
Sbjct: 45 HARLVLSSTIPNNFLASKLINFYSKY---EHLKEAHHVFDEIPER--NTFSWNALLIGYS 99
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
N + L+LFS + +++ +P + +P+++ T V +A++ + L + +H
Sbjct: 100 SKNYHVETLKLFSLIL----SENFETP--HVKPDNFTVTCVLKAVSGMLGDSVLAKMIHC 153
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
+++K GF DVFV L++ Y+K A+ VFDE+P R++V+WN+M+SGY Q G
Sbjct: 154 YVLKNGF-DSDVFVLNGLINSYSKTGDMVLARNVFDEIPERDVVSWNSMISGYFQCGFYE 212
Query: 638 FGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHGYAI 775
L+ EM E + P TV +VL CAQ DL+LGM++H Y I
Sbjct: 213 ECKGLYREMLHLEKFRPGGVTVVSVLQACAQSNDLMLGMEVHQYVI 258
Score = 79.0 bits (193), Expect = 2e-12
Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 30/256 (11%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
H ++K G ++D + LI +YS TG+ + + VF+++P R D W S+I Y
Sbjct: 152 HCYVLKNGFDSDVFVLNGLIN--SYSKTGDMVL-ARNVFDEIPER--DVVSWNSMISGYF 206
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
+ + L+ +M RP SV +A A + + LG +H
Sbjct: 207 QCGFYEECKGLYREMLH----------LEKFRPGGVTVVSVLQACAQSND-LMLGMEVHQ 255
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
++I+ G I D+ V +++ +Y+KC + D A+K+F+EM + +T+ AM+SGY+ G +
Sbjct: 256 YVIENG-IELDIAVYNSIIALYSKCGSLDYARKLFEEMGEPDEITYGAMISGYMIYGFVD 314
Query: 638 FGLNLFLE------------MTG---SEVY---------------LPDEFTVATVLMGCA 727
+NLF E +TG + +Y P+ T++++L G +
Sbjct: 315 QAVNLFQEIEKPCLSTWNAVITGLVQNNLYEQALEFVRKMQLSGDQPNAVTLSSILPGIS 374
Query: 728 QVQDLVLGMQIHGYAI 775
+ G ++H YAI
Sbjct: 375 DLAFAKGGKEVHAYAI 390
Score = 66.6 bits (161), Expect = 9e-09
Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 20/233 (8%)
Frame = +2
Query: 89 MNRHARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIIC 268
M H +I+ G+ D + +IA YS G SL +++FE++ D + ++I
Sbjct: 251 MEVHQYVIENGIELDIAVYNSIIA--LYSKCG-SLDYARKLFEEMGEP--DEITYGAMIS 305
Query: 269 AYSRSNQPHKALRLFSDMRRH-----------YGNDSSISPALN---------TRPNSYV 388
Y +A+ LF ++ + ++ AL +PN+
Sbjct: 306 GYMIYGFVDQAVNLFQEIEKPCLSTWNAVITGLVQNNLYEQALEFVRKMQLSGDQPNAVT 365
Query: 389 FTSVARAIASAPEQASLGQALHAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDE 568
+S+ I+ A G+ +HA+ IK ++++V T ++D YAK SA++VFD
Sbjct: 366 LSSILPGISDLAF-AKGGKEVHAYAIKSD-CNQNIYVATGVIDTYAKLGFIQSARQVFDH 423
Query: 569 MPYRNLVTWNAMLSGYVQNGMENFGLNLFLEMTGSEVYLPDEFTVATVLMGCA 727
R+++ W A++S Y +G L+LF M S PD T VL CA
Sbjct: 424 TKDRSVIIWTAIISAYANHGEAKAALDLFNVML-SHCIRPDSVTFTAVLAACA 475
>ref|NP_001141725.1| hypothetical protein [Zea mays] gi|194705708|gb|ACF86938.1| unknown
[Zea mays] gi|413956425|gb|AFW89074.1| hypothetical
protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 125 bits (313), Expect = 2e-26
Identities = 79/214 (36%), Positives = 113/214 (52%)
Frame = +2
Query: 125 NADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYSRSNQPHKAL 304
+ D + L+A SP G L+ + +F+++P RD W++I+ A+ R QP AL
Sbjct: 89 STDVCSYNTLVAALGRSPRG--LASARALFDRMP--RRDHFSWSAIVSAHVRHGQPRAAL 144
Query: 305 RLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHAHIIKEGFIP 484
++ M R G + N + +S A A A+A A G+ LH H+++ G I
Sbjct: 145 AIYRRMLREPGGSGA--------DNEFTASS-ALAAATAARCARAGRELHCHVVRRG-ID 194
Query: 485 KDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMENFGLNLFLEM 664
D V +AL DMYAK D A+ VFD MP R++V+W AML Y G + G LF+ M
Sbjct: 195 ADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRM 254
Query: 665 TGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHG 766
S + LP+EFT A VL CA+ LG Q+HG
Sbjct: 255 MRSGI-LPNEFTYAGVLRACAEFTSEKLGKQVHG 287
Score = 93.6 bits (231), Expect = 7e-17
Identities = 67/210 (31%), Positives = 100/210 (47%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
H +++ G++ADAV S L YA L + VF+++P +RD W +++ Y
Sbjct: 185 HCHVVRRGIDADAVVWSALADMYAKF---GRLDDARSVFDRMP--VRDVVSWTAMLDRYF 239
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
+ + + RLF M R PN + + V RA A + LG+ +H
Sbjct: 240 DAGRDGEGFRLFVRMMRS-----------GILPNEFTYAGVLRACAEFTSE-KLGKQVHG 287
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
+ K F +ALV MY+K +A +VF MP +LV+W AM+SGY QNG +
Sbjct: 288 RMAKSR-TGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPD 346
Query: 638 FGLNLFLEMTGSEVYLPDEFTVATVLMGCA 727
L+ F +M S + PD T VL CA
Sbjct: 347 EALHCF-DMLLSSGFRPDHVTFVGVLSACA 375
>dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 124 bits (312), Expect = 3e-26
Identities = 76/226 (33%), Positives = 123/226 (54%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
HA ++K GL++D + LI+ Y+ S + S++ E +D W ++I +
Sbjct: 126 HAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAED-----KDVVTWTAMIDGFV 180
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
R+ +A+ F +M++ N SV +A A E G+++H
Sbjct: 181 RNGSASEAMVYFVEMKK-----------TGVAANEMTVVSVLKA-AGKVEDVRFGRSVHG 228
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
++ G + DVF+ ++LVDMY KC+ D A+KVFDEMP RN+VTW A+++GYVQ+ +
Sbjct: 229 LYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFD 288
Query: 638 FGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHGYAI 775
G+ +F EM S+V P+E T+++VL CA V L G ++H Y I
Sbjct: 289 KGMLVFEEMLKSDV-APNEKTLSSVLSACAHVGALHRGRRVHCYMI 333
Score = 77.8 bits (190), Expect = 4e-12
Identities = 51/175 (29%), Positives = 83/175 (47%)
Frame = +2
Query: 203 QQVFEQVPFRLRDTALWASIICAYSRSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNS 382
Q+VF+++P R + W ++I Y +S K + +F +M + + PN
Sbjct: 260 QKVFDEMPSR--NVVTWTALIAGYVQSRCFDKGMLVFEEMLKS-----------DVAPNE 306
Query: 383 YVFTSVARAIASAPEQASLGQALHAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVF 562
+SV A A G+ +H ++IK I + T L+D+Y KC + A VF
Sbjct: 307 KTLSSVLSACAHVGA-LHRGRRVHCYMIKNS-IEINTTAGTTLIDLYVKCGCLEEAILVF 364
Query: 563 DEMPYRNLVTWNAMLSGYVQNGMENFGLNLFLEMTGSEVYLPDEFTVATVLMGCA 727
+ + +N+ TW AM++G+ +G +LF M S V P+E T VL CA
Sbjct: 365 ERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHV-SPNEVTFMAVLSACA 418
>ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g50270 gi|5734776|gb|AAD50041.1|AC007980_6
Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 124 bits (312), Expect = 3e-26
Identities = 76/226 (33%), Positives = 123/226 (54%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
HA ++K GL++D + LI+ Y+ S + S++ E +D W ++I +
Sbjct: 126 HAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAED-----KDVVTWTAMIDGFV 180
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
R+ +A+ F +M++ N SV +A A E G+++H
Sbjct: 181 RNGSASEAMVYFVEMKK-----------TGVAANEMTVVSVLKA-AGKVEDVRFGRSVHG 228
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
++ G + DVF+ ++LVDMY KC+ D A+KVFDEMP RN+VTW A+++GYVQ+ +
Sbjct: 229 LYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFD 288
Query: 638 FGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHGYAI 775
G+ +F EM S+V P+E T+++VL CA V L G ++H Y I
Sbjct: 289 KGMLVFEEMLKSDV-APNEKTLSSVLSACAHVGALHRGRRVHCYMI 333
Score = 77.8 bits (190), Expect = 4e-12
Identities = 51/175 (29%), Positives = 83/175 (47%)
Frame = +2
Query: 203 QQVFEQVPFRLRDTALWASIICAYSRSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNS 382
Q+VF+++P R + W ++I Y +S K + +F +M + + PN
Sbjct: 260 QKVFDEMPSR--NVVTWTALIAGYVQSRCFDKGMLVFEEMLKS-----------DVAPNE 306
Query: 383 YVFTSVARAIASAPEQASLGQALHAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVF 562
+SV A A G+ +H ++IK I + T L+D+Y KC + A VF
Sbjct: 307 KTLSSVLSACAHVGA-LHRGRRVHCYMIKNS-IEINTTAGTTLIDLYVKCGCLEEAILVF 364
Query: 563 DEMPYRNLVTWNAMLSGYVQNGMENFGLNLFLEMTGSEVYLPDEFTVATVLMGCA 727
+ + +N+ TW AM++G+ +G +LF M S V P+E T VL CA
Sbjct: 365 ERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHV-SPNEVTFMAVLSACA 418
>ref|XP_003520781.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1135
Score = 123 bits (309), Expect = 6e-26
Identities = 77/223 (34%), Positives = 119/223 (53%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
H++L+ +A + + L+ YA S+ +F P + W ++I S
Sbjct: 120 HSQLVTTNNHASLANINTLLLLYAKC---GSIHHTLLLFNTYPHPSTNVVTWTTLINQLS 176
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
RSN+P +AL F+ MR PN + F+++ A A A S GQ +HA
Sbjct: 177 RSNKPFQALTFFNRMR-----------TTGIYPNHFTFSAILPACAHAA-LLSEGQQIHA 224
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
I K F+ D FV TAL+DMYAKC + A+ VFDEMP+RNLV+WN+M+ G+V+N +
Sbjct: 225 LIHKHCFL-NDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYG 283
Query: 638 FGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHG 766
+ +F E+ PD+ ++++VL CA + +L G Q+HG
Sbjct: 284 RAIGVFREVLSLG---PDQVSISSVLSACAGLVELDFGKQVHG 323
Score = 70.5 bits (171), Expect = 6e-10
Identities = 60/226 (26%), Positives = 101/226 (44%)
Frame = +2
Query: 98 HARLIKLGLNADAVHASKLIAEYAYSPTGNSLSQVQQVFEQVPFRLRDTALWASIICAYS 277
HA + K D A+ L+ YA S+ + VF+++P R + W S+I +
Sbjct: 223 HALIHKHCFLNDPFVATALLDMYAKC---GSMLLAENVFDEMPHR--NLVSWNSMIVGFV 277
Query: 278 RSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIASAPEQASLGQALHA 457
++ +A+ +F ++ L+ P+ +SV A A E G+ +H
Sbjct: 278 KNKLYGRAIGVFREV-------------LSLGPDQVSISSVLSACAGLVE-LDFGKQVHG 323
Query: 458 HIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTWNAMLSGYVQNGMEN 637
I+K G + V+V+ +LVDMY KC + A K+F R++VTWN M+ G +
Sbjct: 324 SIVKRGLVGL-VYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFE 382
Query: 638 FGLNLFLEMTGSEVYLPDEFTVATVLMGCAQVQDLVLGMQIHGYAI 775
F M V PDE + +++ A + L G IH + +
Sbjct: 383 QACTYFQAMIREGVE-PDEASYSSLFHASASIAALTQGTMIHSHVL 427
Score = 69.3 bits (168), Expect = 1e-09
Identities = 48/164 (29%), Positives = 76/164 (46%)
Frame = +2
Query: 236 RDTALWASIICAYSRSNQPHKALRLFSDMRRHYGNDSSISPALNTRPNSYVFTSVARAIA 415
RD W +I R +A F M R P+ ++S+ A A
Sbjct: 363 RDVVTWNVMIMGCFRCRNFEQACTYFQAMIRE-----------GVEPDEASYSSLFHASA 411
Query: 416 SAPEQASLGQALHAHIIKEGFIPKDVFVETALVDMYAKCAATDSAKKVFDEMPYRNLVTW 595
S G +H+H++K G + K+ + ++LV MY KC + A +VF E N+V W
Sbjct: 412 SIAALTQ-GTMIHSHVLKTGHV-KNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCW 469
Query: 596 NAMLSGYVQNGMENFGLNLFLEMTGSEVYLPDEFTVATVLMGCA 727
AM++ + Q+G N + LF EM +E +P+ T +VL C+
Sbjct: 470 TAMITVFHQHGCANEAIKLFEEML-NEGVVPEYITFVSVLSACS 512
Score = 62.8 bits (151), Expect = 1e-07
Identities = 38/118 (32%), Positives = 63/118 (53%)
Frame = +2
Query: 374 PNSYVFTSVARAIASAPEQASLGQALHAHIIKEGFIPKDVFVETALVDMYAKCAATDSAK 553
P+ +TS+ A AS G +H+H++K G + KD + ++LV MY KC + A
Sbjct: 844 PDGASYTSLFHASASIAALTQ-GTMIHSHVLKTGHV-KDSHISSSLVTMYGKCGSMLDAY 901
Query: 554 KVFDEMPYRNLVTWNAMLSGYVQNGMENFGLNLFLEMTGSEVYLPDEFTVATVLMGCA 727
+VF E +V W AM++ + +G N + LF EM +E +P+ T ++L C+
Sbjct: 902 QVFRETKEHYVVCWTAMITVFHLHGCANEAIELFEEML-NEGVVPEYITFISILSVCS 958