BLASTX nr result

ID: Rauwolfia21_contig00025115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00025115
         (238 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300566.1| 3-hydroxyisobutyrate dehydrogenase family pr...    58   1e-06
ref|XP_004231559.1| PREDICTED: probable 3-hydroxyisobutyrate deh...    55   7e-06

>ref|XP_002300566.1| 3-hydroxyisobutyrate dehydrogenase family protein [Populus
           trichocarpa] gi|222847824|gb|EEE85371.1|
           3-hydroxyisobutyrate dehydrogenase family protein
           [Populus trichocarpa]
          Length = 347

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 30/67 (44%), Positives = 36/67 (53%)
 Frame = +3

Query: 36  MATCRLRSFMQLHKFTCXXXXXXXXXXXXXXXXXXQFERIGFVGLGNMGSQMVNNLITKG 215
           MA CRLR+ + L K                     QFE +GF+GLGNMGS+M NNLI  G
Sbjct: 1   MAICRLRASLSLLKTKSPFFHYVPLHGFSSSQLSSQFESVGFIGLGNMGSRMANNLIKNG 60

Query: 216 YDVTVND 236
           Y V V+D
Sbjct: 61  YKVAVHD 67


>ref|XP_004231559.1| PREDICTED: probable 3-hydroxyisobutyrate dehydrogenase,
           mitochondrial-like [Solanum lycopersicum]
          Length = 344

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
 Frame = +3

Query: 36  MAT-CRLRSFMQLHKFTCXXXXXXXXXXXXXXXXXXQFERIGFVGLGNMGSQMVNNLITK 212
           MAT CRLRS + LHK  C                   F RIGF+GLGNMG++M ++LI  
Sbjct: 1   MATFCRLRSLLGLHKMVCSVSPFYPMHSYSSS----SFGRIGFIGLGNMGARMADSLIKD 56

Query: 213 GYDVTVND 236
           GY+V V+D
Sbjct: 57  GYEVAVHD 64


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