BLASTX nr result
ID: Rauwolfia21_contig00025085
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00025085
(494 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006421324.1| hypothetical protein CICLE_v10006607mg, part... 57 2e-06
ref|XP_006649191.1| PREDICTED: splicing factor 3B subunit 2-like... 57 3e-06
emb|CDJ21578.1| splicing factor 3b subunit 2 [Echinococcus granu... 57 3e-06
ref|XP_004966563.1| PREDICTED: splicing factor 3B subunit 2-like... 57 3e-06
ref|XP_004954471.1| PREDICTED: splicing factor 3B subunit 2-like... 57 3e-06
gb|EMT21943.1| Splicing factor 3B subunit 2 [Aegilops tauschii] 57 3e-06
gb|EMS56988.1| Splicing factor 3B subunit 2 [Triticum urartu] 57 3e-06
ref|NP_001048592.1| Os02g0827300 [Oryza sativa Japonica Group] g... 57 3e-06
ref|XP_003573003.1| PREDICTED: splicing factor 3B subunit 2-like... 57 3e-06
dbj|BAJ93118.1| predicted protein [Hordeum vulgare subsp. vulgare] 57 3e-06
dbj|BAJ91146.1| predicted protein [Hordeum vulgare subsp. vulgare] 57 3e-06
gb|EAY88100.1| hypothetical protein OsI_09533 [Oryza sativa Indi... 57 3e-06
ref|XP_006467840.1| PREDICTED: splicing factor 3B subunit 2-like... 55 1e-05
ref|XP_006449295.1| hypothetical protein CICLE_v10014734mg [Citr... 55 1e-05
ref|XP_004234125.1| PREDICTED: splicing factor 3B subunit 2-like... 55 1e-05
gb|AFW75671.1| hypothetical protein ZEAMMB73_556775 [Zea mays] 55 1e-05
gb|AFW69654.1| hypothetical protein ZEAMMB73_774251 [Zea mays] 55 1e-05
ref|XP_002439081.1| hypothetical protein SORBIDRAFT_10g031230 [S... 55 1e-05
ref|NP_001140348.1| uncharacterized protein LOC100272396 [Zea ma... 55 1e-05
>ref|XP_006421324.1| hypothetical protein CICLE_v10006607mg, partial [Citrus clementina]
gi|557523197|gb|ESR34564.1| hypothetical protein
CICLE_v10006607mg, partial [Citrus clementina]
Length = 456
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/44 (63%), Positives = 33/44 (75%), Gaps = 4/44 (9%)
Frame = -1
Query: 494 AFFKFQTKPKLTSHGDLYFEGKEFEVCLL----PCTWLLDILSA 375
AFFK+QTKPKLT+HGDLY+EGKEFEV L PCT ++ A
Sbjct: 222 AFFKYQTKPKLTTHGDLYYEGKEFEVKQLMEMKPCTLSYELREA 265
>ref|XP_006649191.1| PREDICTED: splicing factor 3B subunit 2-like [Oryza brachyantha]
Length = 572
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -1
Query: 494 AFFKFQTKPKLTSHGDLYFEGKEFEVCL 411
AFFK+QTKPKLTSHGDLY+EGKEFEV L
Sbjct: 264 AFFKYQTKPKLTSHGDLYYEGKEFEVKL 291
>emb|CDJ21578.1| splicing factor 3b subunit 2 [Echinococcus granulosus]
gi|576697649|gb|EUB61189.1| Splicing factor 3B subunit 2
[Echinococcus granulosus]
Length = 658
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -1
Query: 494 AFFKFQTKPKLTSHGDLYFEGKEFEVCL 411
AFFK+QTKPKLTSHGDLY+EGKEFEV L
Sbjct: 300 AFFKYQTKPKLTSHGDLYYEGKEFEVKL 327
>ref|XP_004966563.1| PREDICTED: splicing factor 3B subunit 2-like [Setaria italica]
Length = 628
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -1
Query: 494 AFFKFQTKPKLTSHGDLYFEGKEFEVCL 411
AFFK+QTKPKLTSHGDLY+EGKEFEV L
Sbjct: 320 AFFKYQTKPKLTSHGDLYYEGKEFEVKL 347
>ref|XP_004954471.1| PREDICTED: splicing factor 3B subunit 2-like [Setaria italica]
Length = 580
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -1
Query: 494 AFFKFQTKPKLTSHGDLYFEGKEFEVCL 411
AFFK+QTKPKLTSHGDLY+EGKEFEV L
Sbjct: 272 AFFKYQTKPKLTSHGDLYYEGKEFEVKL 299
>gb|EMT21943.1| Splicing factor 3B subunit 2 [Aegilops tauschii]
Length = 703
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -1
Query: 494 AFFKFQTKPKLTSHGDLYFEGKEFEVCL 411
AFFK+QTKPKLTSHGDLY+EGKEFEV L
Sbjct: 394 AFFKYQTKPKLTSHGDLYYEGKEFEVKL 421
>gb|EMS56988.1| Splicing factor 3B subunit 2 [Triticum urartu]
Length = 617
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -1
Query: 494 AFFKFQTKPKLTSHGDLYFEGKEFEVCL 411
AFFK+QTKPKLTSHGDLY+EGKEFEV L
Sbjct: 308 AFFKYQTKPKLTSHGDLYYEGKEFEVKL 335
>ref|NP_001048592.1| Os02g0827300 [Oryza sativa Japonica Group]
gi|48716448|dbj|BAD23055.1| putative splicing factor 3B
subunit 2 [Oryza sativa Japonica Group]
gi|113538123|dbj|BAF10506.1| Os02g0827300 [Oryza sativa
Japonica Group] gi|125584232|gb|EAZ25163.1| hypothetical
protein OsJ_08964 [Oryza sativa Japonica Group]
Length = 582
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -1
Query: 494 AFFKFQTKPKLTSHGDLYFEGKEFEVCL 411
AFFK+QTKPKLTSHGDLY+EGKEFEV L
Sbjct: 274 AFFKYQTKPKLTSHGDLYYEGKEFEVKL 301
>ref|XP_003573003.1| PREDICTED: splicing factor 3B subunit 2-like, partial [Brachypodium
distachyon]
Length = 576
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -1
Query: 494 AFFKFQTKPKLTSHGDLYFEGKEFEVCL 411
AFFK+QTKPKLTSHGDLY+EGKEFEV L
Sbjct: 268 AFFKYQTKPKLTSHGDLYYEGKEFEVKL 295
>dbj|BAJ93118.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 435
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -1
Query: 494 AFFKFQTKPKLTSHGDLYFEGKEFEVCL 411
AFFK+QTKPKLTSHGDLY+EGKEFEV L
Sbjct: 126 AFFKYQTKPKLTSHGDLYYEGKEFEVKL 153
>dbj|BAJ91146.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 581
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -1
Query: 494 AFFKFQTKPKLTSHGDLYFEGKEFEVCL 411
AFFK+QTKPKLTSHGDLY+EGKEFEV L
Sbjct: 272 AFFKYQTKPKLTSHGDLYYEGKEFEVKL 299
>gb|EAY88100.1| hypothetical protein OsI_09533 [Oryza sativa Indica Group]
Length = 581
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -1
Query: 494 AFFKFQTKPKLTSHGDLYFEGKEFEVCL 411
AFFK+QTKPKLTSHGDLY+EGKEFEV L
Sbjct: 274 AFFKYQTKPKLTSHGDLYYEGKEFEVKL 301
>ref|XP_006467840.1| PREDICTED: splicing factor 3B subunit 2-like [Citrus sinensis]
Length = 580
Score = 55.1 bits (131), Expect = 1e-05
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = -1
Query: 494 AFFKFQTKPKLTSHGDLYFEGKEFEVCL 411
AFFK+QTKPKLTSHGDLY EGKEFEV L
Sbjct: 276 AFFKYQTKPKLTSHGDLYHEGKEFEVKL 303
>ref|XP_006449295.1| hypothetical protein CICLE_v10014734mg [Citrus clementina]
gi|557551906|gb|ESR62535.1| hypothetical protein
CICLE_v10014734mg [Citrus clementina]
Length = 580
Score = 55.1 bits (131), Expect = 1e-05
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = -1
Query: 494 AFFKFQTKPKLTSHGDLYFEGKEFEVCL 411
AFFK+QTKPKLTSHGDLY EGKEFEV L
Sbjct: 276 AFFKYQTKPKLTSHGDLYHEGKEFEVKL 303
>ref|XP_004234125.1| PREDICTED: splicing factor 3B subunit 2-like [Solanum lycopersicum]
Length = 583
Score = 55.1 bits (131), Expect = 1e-05
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = -1
Query: 494 AFFKFQTKPKLTSHGDLYFEGKEFEVCL 411
AFFK+QTKPKL+SHGDLY+EGKEFEV L
Sbjct: 280 AFFKYQTKPKLSSHGDLYYEGKEFEVKL 307
>gb|AFW75671.1| hypothetical protein ZEAMMB73_556775 [Zea mays]
Length = 401
Score = 55.1 bits (131), Expect = 1e-05
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = -1
Query: 494 AFFKFQTKPKLTSHGDLYFEGKEFEVCL 411
AFFK+QTKPKL+SHGDLY+EGKEFEV L
Sbjct: 82 AFFKYQTKPKLSSHGDLYYEGKEFEVKL 109
>gb|AFW69654.1| hypothetical protein ZEAMMB73_774251 [Zea mays]
Length = 538
Score = 55.1 bits (131), Expect = 1e-05
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = -1
Query: 494 AFFKFQTKPKLTSHGDLYFEGKEFEVCL 411
AFFK+QTKPKL+SHGDLY+EGKEFEV L
Sbjct: 276 AFFKYQTKPKLSSHGDLYYEGKEFEVKL 303
>ref|XP_002439081.1| hypothetical protein SORBIDRAFT_10g031230 [Sorghum bicolor]
gi|241917304|gb|EER90448.1| hypothetical protein
SORBIDRAFT_10g031230 [Sorghum bicolor]
Length = 583
Score = 55.1 bits (131), Expect = 1e-05
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = -1
Query: 494 AFFKFQTKPKLTSHGDLYFEGKEFEVCL 411
AFFK+QTKPKL+SHGDLY+EGKEFEV L
Sbjct: 275 AFFKYQTKPKLSSHGDLYYEGKEFEVKL 302
>ref|NP_001140348.1| uncharacterized protein LOC100272396 [Zea mays]
gi|194699108|gb|ACF83638.1| unknown [Zea mays]
gi|413935104|gb|AFW69655.1| hypothetical protein
ZEAMMB73_774251 [Zea mays]
Length = 583
Score = 55.1 bits (131), Expect = 1e-05
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = -1
Query: 494 AFFKFQTKPKLTSHGDLYFEGKEFEVCL 411
AFFK+QTKPKL+SHGDLY+EGKEFEV L
Sbjct: 276 AFFKYQTKPKLSSHGDLYYEGKEFEVKL 303