BLASTX nr result
ID: Rauwolfia21_contig00025049
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00025049
(670 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006350181.1| PREDICTED: pentatricopeptide repeat-containi... 58 3e-17
gb|EMJ05463.1| hypothetical protein PRUPE_ppa001801mg [Prunus pe... 54 2e-16
ref|XP_004236606.1| PREDICTED: pentatricopeptide repeat-containi... 58 3e-16
emb|CBI29835.3| unnamed protein product [Vitis vinifera] 59 1e-15
ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containi... 59 1e-15
gb|EOY09212.1| Tetratricopeptide repeat (TPR)-like superfamily p... 60 1e-15
ref|XP_006421326.1| hypothetical protein CICLE_v10004305mg [Citr... 59 8e-14
gb|EXC04358.1| hypothetical protein L484_015985 [Morus notabilis] 57 2e-13
ref|XP_006293674.1| hypothetical protein CARUB_v10022630mg [Caps... 55 3e-13
ref|NP_850356.1| protein EMBRYO DEFECTIVE 2654 [Arabidopsis thal... 55 3e-13
dbj|BAH56800.1| AT2G41720 [Arabidopsis thaliana] 55 3e-13
gb|AAC02776.1| putative salt-inducible protein [Arabidopsis thal... 55 3e-13
ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata] g... 55 4e-13
ref|XP_006492924.1| PREDICTED: pentatricopeptide repeat-containi... 56 2e-12
ref|XP_006492925.1| PREDICTED: pentatricopeptide repeat-containi... 56 2e-12
ref|XP_004304344.1| PREDICTED: pentatricopeptide repeat-containi... 47 2e-12
ref|XP_002308939.2| pentatricopeptide repeat-containing family p... 46 8e-12
gb|EPS67317.1| hypothetical protein M569_07453, partial [Genlise... 50 4e-11
ref|XP_003625140.1| Pentatricopeptide repeat-containing protein ... 44 4e-11
ref|XP_006411439.1| hypothetical protein EUTSA_v10016262mg [Eutr... 54 6e-10
>ref|XP_006350181.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Solanum tuberosum]
Length = 834
Score = 58.2 bits (139), Expect(3) = 3e-17
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +3
Query: 237 RKSDLPKRHRMPVETDRSQKDWTITEVVENIMKLKHW 347
RKSDLPK R+ VE DR QKDW ++EVVE IMK+ HW
Sbjct: 70 RKSDLPKHQRLRVEGDRFQKDWGVSEVVEKIMKINHW 106
Score = 42.7 bits (99), Expect(3) = 3e-17
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Frame = +1
Query: 67 TILQHP----LLQEPQSETKSCKEIRPRNSLQEEDAFQEKKKAHVDYDNRTHCVSVRISG 234
TI QHP S T S K+ +P+N + AF+EKKKA VDYD H V+VRI G
Sbjct: 11 TIPQHPNPKFKTHVRTSITVSQKQQKPKND--NKAAFEEKKKASVDYDKGIHKVTVRIDG 68
Score = 33.9 bits (76), Expect(3) = 3e-17
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 347 EDVEGVLNRWACRFARKN 400
+D+EGVLN WA RFARKN
Sbjct: 107 DDIEGVLNCWAGRFARKN 124
>gb|EMJ05463.1| hypothetical protein PRUPE_ppa001801mg [Prunus persica]
Length = 763
Score = 53.9 bits (128), Expect(3) = 2e-16
Identities = 20/38 (52%), Positives = 29/38 (76%)
Frame = +3
Query: 234 LRKSDLPKRHRMPVETDRSQKDWTITEVVENIMKLKHW 347
L K +PK HR+ VET+R QKDW +++VV+ + KL+HW
Sbjct: 56 LTKQHIPKHHRLRVETERFQKDWAVSDVVDRVYKLRHW 93
Score = 42.0 bits (97), Expect(3) = 2e-16
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 67 TILQHPLLQEPQSETKS-CKEIRPRNSLQEEDAFQEKKKAHVDYDNRTHCVSVRISG 234
T+ Q P L +S T+ CK +P N+ AF+EKK+ VDYD TH +S RI G
Sbjct: 3 TVSQPPFLNPTRSTTRIVCK--KPANN--SSSAFEEKKQVSVDYDRGTHHISTRIPG 55
Score = 36.2 bits (82), Expect(3) = 2e-16
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 329 YEVEALEDVEGVLNRWACRFARKN 400
Y++ +D+EG+LNRW RFARKN
Sbjct: 88 YKLRHWDDIEGLLNRWVGRFARKN 111
>ref|XP_004236606.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Solanum lycopersicum]
Length = 834
Score = 58.2 bits (139), Expect(3) = 3e-16
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +3
Query: 237 RKSDLPKRHRMPVETDRSQKDWTITEVVENIMKLKHW 347
RKSDLPK R+ VE DR QKDW ++EVVE IMK+ HW
Sbjct: 70 RKSDLPKHQRLRVEGDRFQKDWGVSEVVEKIMKINHW 106
Score = 39.3 bits (90), Expect(3) = 3e-16
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Frame = +1
Query: 67 TILQHPLLQEPQSETK-------SCKEIRPRNSLQEEDAFQEKKKAHVDYDNRTHCVSVR 225
T QHP P+ +T S K+ +P+N + A++EKKKA VDYD H V+VR
Sbjct: 11 TFPQHP---NPKFKTHFRASIIVSQKQQKPKND--NKAAYEEKKKASVDYDKGIHKVTVR 65
Query: 226 ISG 234
I G
Sbjct: 66 IDG 68
Score = 33.9 bits (76), Expect(3) = 3e-16
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 347 EDVEGVLNRWACRFARKN 400
+D+EGVLN WA RFARKN
Sbjct: 107 DDIEGVLNCWAGRFARKN 124
>emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 59.3 bits (142), Expect(3) = 1e-15
Identities = 23/38 (60%), Positives = 32/38 (84%)
Frame = +3
Query: 234 LRKSDLPKRHRMPVETDRSQKDWTITEVVENIMKLKHW 347
LRK+D+PK +R+ VE DR QKDW+++EVVE ++KL HW
Sbjct: 73 LRKADIPKHYRLRVEADRFQKDWSVSEVVERLLKLNHW 110
Score = 36.6 bits (83), Expect(3) = 1e-15
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 79 HPLLQEPQSETK----SCKEIRPRNSLQEEDAFQEKKKAHVDYDNRTHCVSVRISG 234
HP P T SCKE + + +L+E+ KK VDYDN H VS +SG
Sbjct: 22 HPKSSNPTFTTHKTLISCKESKSKGALEEK-----KKVVFVDYDNGKHQVSTHVSG 72
Score = 33.5 bits (75), Expect(3) = 1e-15
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2
Query: 347 EDVEGVLNRWACRFARKN 400
+DVEG+LNRW RF+RKN
Sbjct: 111 DDVEGLLNRWVGRFSRKN 128
>ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 59.3 bits (142), Expect(3) = 1e-15
Identities = 23/38 (60%), Positives = 32/38 (84%)
Frame = +3
Query: 234 LRKSDLPKRHRMPVETDRSQKDWTITEVVENIMKLKHW 347
LRK+D+PK +R+ VE DR QKDW+++EVVE ++KL HW
Sbjct: 73 LRKADIPKHYRLRVEADRFQKDWSVSEVVERLLKLNHW 110
Score = 36.6 bits (83), Expect(3) = 1e-15
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 79 HPLLQEPQSETK----SCKEIRPRNSLQEEDAFQEKKKAHVDYDNRTHCVSVRISG 234
HP P T SCKE + + +L+E+ KK VDYDN H VS +SG
Sbjct: 22 HPKSSNPTFTTHKTLISCKESKSKGALEEK-----KKVVFVDYDNGKHQVSTHVSG 72
Score = 33.5 bits (75), Expect(3) = 1e-15
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2
Query: 347 EDVEGVLNRWACRFARKN 400
+DVEG+LNRW RF+RKN
Sbjct: 111 DDVEGLLNRWVGRFSRKN 128
>gb|EOY09212.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
[Theobroma cacao]
Length = 841
Score = 59.7 bits (143), Expect(3) = 1e-15
Identities = 24/39 (61%), Positives = 33/39 (84%)
Frame = +3
Query: 234 LRKSDLPKRHRMPVETDRSQKDWTITEVVENIMKLKHWK 350
LRK+D+PKR+R+ VE DR QKDWT++EVV+ I +L HW+
Sbjct: 64 LRKADIPKRYRLRVEGDRFQKDWTVSEVVDQIQELNHWE 102
Score = 37.0 bits (84), Expect(3) = 1e-15
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Frame = +1
Query: 64 LTILQHPL-----LQEPQSETKSCKEIRPRNSL-----QEEDAFQEKKKAHVDYDNRTHC 213
+T L HPL LQ P S + RP++ + + + AF+++K VDYD H
Sbjct: 1 MTTLPHPLPLKLTLQSPDSTHST----RPKSLVLCKKRKNDTAFEDQKSGFVDYDKGQHE 56
Query: 214 VSVRISG 234
VS R+SG
Sbjct: 57 VSTRVSG 63
Score = 32.7 bits (73), Expect(3) = 1e-15
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2
Query: 332 EVEALEDVEGVLNRWACRFARKN 400
E+ E+VE VLNRW RFARKN
Sbjct: 97 ELNHWENVEPVLNRWVGRFARKN 119
>ref|XP_006421326.1| hypothetical protein CICLE_v10004305mg [Citrus clementina]
gi|557523199|gb|ESR34566.1| hypothetical protein
CICLE_v10004305mg [Citrus clementina]
Length = 846
Score = 58.9 bits (141), Expect(3) = 8e-14
Identities = 23/39 (58%), Positives = 35/39 (89%)
Frame = +3
Query: 234 LRKSDLPKRHRMPVETDRSQKDWTITEVVENIMKLKHWK 350
LRKSD+P+RHR+ VE +R QKDW+++EVVE +++LKH++
Sbjct: 71 LRKSDIPRRHRLAVEGNRFQKDWSVSEVVERVLELKHYE 109
Score = 38.5 bits (88), Expect(3) = 8e-14
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +2
Query: 332 EVEALEDVEGVLNRWACRFARKN 400
E++ EDVEGVLNRW RFARKN
Sbjct: 104 ELKHYEDVEGVLNRWVGRFARKN 126
Score = 25.4 bits (54), Expect(3) = 8e-14
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 163 FQEKKKAHVDYDNRTHCVSVRISG 234
F+ ++ VDYD H VS ++SG
Sbjct: 47 FKGRRSGFVDYDKGQHEVSTQVSG 70
>gb|EXC04358.1| hypothetical protein L484_015985 [Morus notabilis]
Length = 846
Score = 56.6 bits (135), Expect(3) = 2e-13
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +3
Query: 234 LRKSDLPKRHRMPVETDRSQKDWTITEVVENIMKLKHW 347
LRK+D+PKRHR+ V+ DR QKDWTI+EV + + L+ W
Sbjct: 62 LRKADIPKRHRLQVQNDRFQKDWTISEVADRVSDLRRW 99
Score = 34.7 bits (78), Expect(3) = 2e-13
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 61 NLTILQHPLL--QEPQSETKSCKEIRPRNSLQEEDAFQEKKKAHVDYDNRTHCVSVRISG 234
NLT + PL + S + RN L AF+E+K+ VDYD TH VS R+ G
Sbjct: 6 NLTNPKEPLRAGNSVLCSSSSKSTAKSRNDL----AFEERKRVSVDYDRGTHDVSTRLPG 61
Score = 30.0 bits (66), Expect(3) = 2e-13
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 347 EDVEGVLNRWACRFARKN 400
+DV+G+LN W RFARKN
Sbjct: 100 DDVDGLLNCWIGRFARKN 117
>ref|XP_006293674.1| hypothetical protein CARUB_v10022630mg [Capsella rubella]
gi|482562382|gb|EOA26572.1| hypothetical protein
CARUB_v10022630mg [Capsella rubella]
Length = 841
Score = 55.1 bits (131), Expect(3) = 3e-13
Identities = 21/39 (53%), Positives = 32/39 (82%)
Frame = +3
Query: 234 LRKSDLPKRHRMPVETDRSQKDWTITEVVENIMKLKHWK 350
LRK+D+P+R+R+ VE DR QKDW+++EVV+ +M L W+
Sbjct: 80 LRKADIPRRYRLRVENDRFQKDWSVSEVVDRLMALNRWE 118
Score = 33.9 bits (76), Expect(3) = 3e-13
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 157 DAFQEKKKAHVDYDNRTHCVSVRISG 234
+AFQEKK V+YD H VSVR+ G
Sbjct: 54 EAFQEKKSVSVNYDRGEHEVSVRVGG 79
Score = 32.0 bits (71), Expect(3) = 3e-13
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 347 EDVEGVLNRWACRFARKN 400
E+V+GVLN W RFARKN
Sbjct: 118 EEVDGVLNSWVGRFARKN 135
>ref|NP_850356.1| protein EMBRYO DEFECTIVE 2654 [Arabidopsis thaliana]
gi|75158748|sp|Q8RWS8.1|PP199_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g41720; AltName: Full=Protein EMBRYO DEFECTIVE 2654
gi|20268762|gb|AAM14084.1| putative salt-inducible
protein [Arabidopsis thaliana]
gi|21436141|gb|AAM51317.1| putative salt-inducible
protein [Arabidopsis thaliana]
gi|330254931|gb|AEC10025.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 54.7 bits (130), Expect(3) = 3e-13
Identities = 21/39 (53%), Positives = 32/39 (82%)
Frame = +3
Query: 234 LRKSDLPKRHRMPVETDRSQKDWTITEVVENIMKLKHWK 350
LRK+D+P+R+R+ VE DR QKDW+++EVV+ +M L W+
Sbjct: 54 LRKADIPRRYRIRVENDRFQKDWSVSEVVDRLMALNRWE 92
Score = 34.3 bits (77), Expect(3) = 3e-13
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 67 TILQHPLLQEPQSETKSCKEIRPRNSLQEEDAFQEKKKAHVDYDNRTHCVSVRISG 234
T+ L+ P+S +P + + DAFQEKK V+YD H VSV I G
Sbjct: 3 TVTNFKLVTPPESSRAD----KP-GATKASDAFQEKKSVSVNYDRGEHEVSVNIGG 53
Score = 32.0 bits (71), Expect(3) = 3e-13
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 347 EDVEGVLNRWACRFARKN 400
E+V+GVLN W RFARKN
Sbjct: 92 EEVDGVLNSWVGRFARKN 109
>dbj|BAH56800.1| AT2G41720 [Arabidopsis thaliana]
Length = 815
Score = 54.7 bits (130), Expect(3) = 3e-13
Identities = 21/39 (53%), Positives = 32/39 (82%)
Frame = +3
Query: 234 LRKSDLPKRHRMPVETDRSQKDWTITEVVENIMKLKHWK 350
LRK+D+P+R+R+ VE DR QKDW+++EVV+ +M L W+
Sbjct: 54 LRKADIPRRYRIRVENDRFQKDWSVSEVVDRLMALNRWE 92
Score = 34.3 bits (77), Expect(3) = 3e-13
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 67 TILQHPLLQEPQSETKSCKEIRPRNSLQEEDAFQEKKKAHVDYDNRTHCVSVRISG 234
T+ L+ P+S +P + + DAFQEKK V+YD H VSV I G
Sbjct: 3 TVTNFKLVTPPESSRAD----KP-GATKASDAFQEKKSVSVNYDRGEHEVSVNIGG 53
Score = 32.0 bits (71), Expect(3) = 3e-13
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 347 EDVEGVLNRWACRFARKN 400
E+V+GVLN W RFARKN
Sbjct: 92 EEVDGVLNSWVGRFARKN 109
>gb|AAC02776.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 810
Score = 54.7 bits (130), Expect(3) = 3e-13
Identities = 21/39 (53%), Positives = 32/39 (82%)
Frame = +3
Query: 234 LRKSDLPKRHRMPVETDRSQKDWTITEVVENIMKLKHWK 350
LRK+D+P+R+R+ VE DR QKDW+++EVV+ +M L W+
Sbjct: 54 LRKADIPRRYRIRVENDRFQKDWSVSEVVDRLMALNRWE 92
Score = 34.3 bits (77), Expect(3) = 3e-13
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 67 TILQHPLLQEPQSETKSCKEIRPRNSLQEEDAFQEKKKAHVDYDNRTHCVSVRISG 234
T+ L+ P+S +P + + DAFQEKK V+YD H VSV I G
Sbjct: 3 TVTNFKLVTPPESSRAD----KP-GATKASDAFQEKKSVSVNYDRGEHEVSVNIGG 53
Score = 32.0 bits (71), Expect(3) = 3e-13
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 347 EDVEGVLNRWACRFARKN 400
E+V+GVLN W RFARKN
Sbjct: 92 EEVDGVLNSWVGRFARKN 109
>ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 54.7 bits (130), Expect(3) = 4e-13
Identities = 21/39 (53%), Positives = 32/39 (82%)
Frame = +3
Query: 234 LRKSDLPKRHRMPVETDRSQKDWTITEVVENIMKLKHWK 350
LRK+D+P+R+R+ VE DR QKDW+++EVV+ +M L W+
Sbjct: 54 LRKADIPRRYRIRVENDRFQKDWSVSEVVDRLMALNRWE 92
Score = 33.9 bits (76), Expect(3) = 4e-13
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 67 TILQHPLLQEPQSETKSCKEIRPRNSLQEEDAFQEKKKAHVDYDNRTHCVSVRISG 234
T+ L+ P+S +P + + +AFQEKK V+YD H VS+R+ G
Sbjct: 3 TVTNFKLVTPPESSRAD----KP-GATKTSEAFQEKKSVSVNYDRGEHEVSIRVGG 53
Score = 32.0 bits (71), Expect(3) = 4e-13
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 347 EDVEGVLNRWACRFARKN 400
E+V+GVLN W RFARKN
Sbjct: 92 EEVDGVLNSWVGRFARKN 109
>ref|XP_006492924.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like isoform X1 [Citrus sinensis]
Length = 859
Score = 55.8 bits (133), Expect(3) = 2e-12
Identities = 22/39 (56%), Positives = 34/39 (87%)
Frame = +3
Query: 234 LRKSDLPKRHRMPVETDRSQKDWTITEVVENIMKLKHWK 350
LRKSD+P+RHR+ VE +R QKDW+++EVVE ++ LK+++
Sbjct: 71 LRKSDIPRRHRLAVEGNRFQKDWSVSEVVERVLALKYYE 109
Score = 37.0 bits (84), Expect(3) = 2e-12
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2
Query: 347 EDVEGVLNRWACRFARKN 400
EDVEGVLNRW RFARKN
Sbjct: 109 EDVEGVLNRWVGRFARKN 126
Score = 25.4 bits (54), Expect(3) = 2e-12
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 163 FQEKKKAHVDYDNRTHCVSVRISG 234
F+ ++ VDYD H VS ++SG
Sbjct: 47 FKGRRSGFVDYDKGQHEVSTQVSG 70
>ref|XP_006492925.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like isoform X2 [Citrus sinensis]
Length = 846
Score = 55.8 bits (133), Expect(3) = 2e-12
Identities = 22/39 (56%), Positives = 34/39 (87%)
Frame = +3
Query: 234 LRKSDLPKRHRMPVETDRSQKDWTITEVVENIMKLKHWK 350
LRKSD+P+RHR+ VE +R QKDW+++EVVE ++ LK+++
Sbjct: 71 LRKSDIPRRHRLAVEGNRFQKDWSVSEVVERVLALKYYE 109
Score = 37.0 bits (84), Expect(3) = 2e-12
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2
Query: 347 EDVEGVLNRWACRFARKN 400
EDVEGVLNRW RFARKN
Sbjct: 109 EDVEGVLNRWVGRFARKN 126
Score = 25.4 bits (54), Expect(3) = 2e-12
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 163 FQEKKKAHVDYDNRTHCVSVRISG 234
F+ ++ VDYD H VS ++SG
Sbjct: 47 FKGRRSGFVDYDKGQHEVSTQVSG 70
>ref|XP_004304344.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Fragaria vesca subsp. vesca]
Length = 847
Score = 46.6 bits (109), Expect(3) = 2e-12
Identities = 17/38 (44%), Positives = 29/38 (76%)
Frame = +3
Query: 234 LRKSDLPKRHRMPVETDRSQKDWTITEVVENIMKLKHW 347
LRK D+PK HR+ ++TD QKDW++++VV + +L+ +
Sbjct: 51 LRKRDIPKHHRLRLQTDPFQKDWSVSDVVHRVYQLRRY 88
Score = 37.4 bits (85), Expect(3) = 2e-12
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 329 YEVEALEDVEGVLNRWACRFARKN 400
Y++ +D++GVLNRW RFARKN
Sbjct: 83 YQLRRYDDIDGVLNRWVGRFARKN 106
Score = 33.9 bits (76), Expect(3) = 2e-12
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 139 NSLQEEDAFQEKKKAHVDYDNRTHCVSVRISG 234
N+ + F+EKK VDYD TH +S +ISG
Sbjct: 19 NNKTDSTPFKEKKHVSVDYDAATHTLSTQISG 50
>ref|XP_002308939.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550335476|gb|EEE92462.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 822
Score = 45.8 bits (107), Expect(3) = 8e-12
Identities = 16/37 (43%), Positives = 30/37 (81%)
Frame = +3
Query: 234 LRKSDLPKRHRMPVETDRSQKDWTITEVVENIMKLKH 344
+RK +P+R+R+ V+ DR QKDW++++VV+ +++L H
Sbjct: 59 IRKDQIPQRYRIRVQGDRFQKDWSVSQVVQKVLELDH 95
Score = 35.4 bits (80), Expect(3) = 8e-12
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 67 TILQH--PLLQEPQSETKSCKEIRPRNSLQEEDAFQEKKKAHVDYDNRTHCVSVRISG 234
TI H PLL P K I +NS + + AF+EKK VDYD H VS ++SG
Sbjct: 3 TIHHHHLPLLHNPTPPAFKPK-ILCKNS-KNDAAFEEKKSGFVDYDKGIHHVSTQVSG 58
Score = 34.7 bits (78), Expect(3) = 8e-12
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 347 EDVEGVLNRWACRFARKN 400
+DVEG+LNRW RFARKN
Sbjct: 98 DDVEGLLNRWVGRFARKN 115
>gb|EPS67317.1| hypothetical protein M569_07453, partial [Genlisea aurea]
Length = 821
Score = 50.4 bits (119), Expect(3) = 4e-11
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +3
Query: 234 LRKSDLPKRHRMPVETDRSQKDWTITEVVENIMKLKH 344
+ KSDLP R+R+ VE DR Q+DWT+TEVVE I L H
Sbjct: 58 IMKSDLPTRNRLRVEGDRFQRDWTVTEVVEMINDLNH 94
Score = 35.4 bits (80), Expect(3) = 4e-11
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 347 EDVEGVLNRWACRFARKN 400
ED+EGVLN+WA RF+RKN
Sbjct: 96 EDIEGVLNQWAGRFSRKN 113
Score = 27.7 bits (60), Expect(3) = 4e-11
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 157 DAFQEKKKAHVDYDNRTHCVSVRISG 234
D+F+E K A VDYD TH + I G
Sbjct: 32 DSFKETKVARVDYDAGTHKLFTLIPG 57
>ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 855
Score = 43.5 bits (101), Expect(3) = 4e-11
Identities = 17/35 (48%), Positives = 27/35 (77%)
Frame = +3
Query: 234 LRKSDLPKRHRMPVETDRSQKDWTITEVVENIMKL 338
LRK D+P +R+ V +R QKDWT++EVV++++ L
Sbjct: 61 LRKEDIPAHYRLRVAGNRFQKDWTVSEVVDSVLSL 95
Score = 36.2 bits (82), Expect(3) = 4e-11
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +1
Query: 109 TKSCKEIRPRNSLQEEDAFQEKKKAHVDYDNRTHCVSVRISG 234
T+ K R E AF+EKK VDYD H VS +ISG
Sbjct: 19 TRPPKSTTTRKKSSNEVAFKEKKDGFVDYDRGHHQVSTKISG 60
Score = 33.9 bits (76), Expect(3) = 4e-11
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2
Query: 347 EDVEGVLNRWACRFARKN 400
+D+EG+LNRW RFARKN
Sbjct: 99 DDIEGLLNRWIGRFARKN 116
>ref|XP_006411439.1| hypothetical protein EUTSA_v10016262mg [Eutrema salsugineum]
gi|557112608|gb|ESQ52892.1| hypothetical protein
EUTSA_v10016262mg [Eutrema salsugineum]
Length = 811
Score = 54.3 bits (129), Expect(2) = 6e-10
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 12/78 (15%)
Frame = +3
Query: 237 RKSDLPKRHRMPVETDRSQKDWTITEVVENIMKLKHW------------KMLKVSLIAGL 380
RK+D+P+R+R+ VE DR QKDW+++EVV+ +M L W + + + +
Sbjct: 55 RKADIPRRYRLRVENDRFQKDWSVSEVVDRLMALNRWDQVDGVLNSWVGRFARKNFSVLI 114
Query: 381 AALPARTCKKVFLSVFNF 434
L R C ++ ++VFN+
Sbjct: 115 RELSRRGCIELCVNVFNW 132
Score = 35.8 bits (81), Expect(2) = 6e-10
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +1
Query: 67 TILQHPLLQEPQSETKSCKEIRPRNSLQEEDAFQEKKKAHVDYDNRTHCVSVRISG 234
T+ L+ P+S + + DAFQEKK V+YD H VSVR+ G
Sbjct: 3 TVTHFKLVAPPESSRADLP-----GATKASDAFQEKKSVSVNYDRGEHEVSVRVGG 53