BLASTX nr result

ID: Rauwolfia21_contig00024493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00024493
         (623 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006359789.1| PREDICTED: lysine-specific histone demethyla...    86   8e-15
ref|XP_002265069.1| PREDICTED: lysine-specific histone demethyla...    61   2e-07

>ref|XP_006359789.1| PREDICTED: lysine-specific histone demethylase 1 homolog 1-like
           [Solanum tuberosum]
          Length = 812

 Score = 85.9 bits (211), Expect = 8e-15
 Identities = 62/160 (38%), Positives = 84/160 (52%), Gaps = 3/160 (1%)
 Frame = -3

Query: 471 PPQAITEPAVSESHLNNTSEPVNESQPTSESQAAMELDRAAFNEYQPTSESQPAMELEPA 292
           PP+        E    +     N S P + S+AA+    +  ++   +SE++ + +L P 
Sbjct: 8   PPETSHNVNSDEILRQDNHHNANFSPPQTTSEAAVS--DSQLDDLPKSSETKISSDLPPP 65

Query: 291 APDTEPGPHPPXXXXXXXKLFTDMIS---TAAAASGLRVLRPNPKPSTAYSYSETDLGDD 121
              T P            + FTD+I    +AAA +GLRVLRPNPKPSTAYSYSET+L   
Sbjct: 66  TGVTPP---QVKRRRRRKRFFTDLIPPSVSAAAVNGLRVLRPNPKPSTAYSYSETELATG 122

Query: 120 DVNAKPHIIHXXXXXXXXXXSKLSDLAKEVDIEALIAISV 1
           D  +K H              ++SDLAKEVD+EALIAISV
Sbjct: 123 DDLSKNH----------NRRRRMSDLAKEVDVEALIAISV 152


>ref|XP_002265069.1| PREDICTED: lysine-specific histone demethylase 1 homolog 1 [Vitis
           vinifera]
          Length = 677

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 49/138 (35%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
 Frame = -3

Query: 402 ESQPTSESQAAMELDRAAFNEYQPTSESQPA-MELEPAAPDT---EPGPHPPXXXXXXXK 235
           E Q  S++  A     A   E  P ++S P    LE    D+   E    PP       K
Sbjct: 2   EPQDLSDNPTA-----AVSGESTPENQSSPPETTLEVRVSDSQLDETSEPPPKKRRRRKK 56

Query: 234 LFTDMISTAAAASGLRVLRPNPKPSTAYSYSETDLGDDDVNAKPHIIHXXXXXXXXXXSK 55
            F +MIS+AAA +GLR+LRP+PK S        D+    +N  P +             +
Sbjct: 57  QFPEMISSAAAVTGLRLLRPHPKSSIYSEKIMDDIIGMQINDSPAL-----SKTHRRRRR 111

Query: 54  LSDLAKEVDIEALIAISV 1
           ++DLAKEVD+EAL+AISV
Sbjct: 112 IADLAKEVDVEALVAISV 129


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