BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00024478
         (1828 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]               603   e-174
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   577   e-162
emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera]   576   e-161
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   556   e-160
emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]   563   e-158
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja...   550   e-156
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]     548   e-156
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...   548   e-156
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s...   547   e-155
gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc...   547   e-155
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]     547   e-155
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]         547   e-155
gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-...   547   e-155
gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc...   547   e-155
emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]        546   e-155
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]         546   e-155
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]         546   e-155
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]   554   e-155
gb|AAT58846.1| putative polyprotein [Oryza sativa Japonica Group]     545   e-155
gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]                       540   e-154

>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score =  603 bits (1554), Expect(2) = e-174
 Identities = 293/499 (58%), Positives = 384/499 (76%)
 Frame = +3

Query: 303  DASFWKEAIKSKLDSIMTNYTWDLVDLLKGSKPIKCK*IFRRKLKPDGTIEKFKARLVVV 482
            DA  W +AIK++L+SI  N TW LVDL KG+KPI CK IF++K  PDG+IEK+KARLV  
Sbjct: 780  DAKHWDKAIKTELESIKKNNTWTLVDLPKGAKPIGCKWIFKKKYHPDGSIEKYKARLVAK 839

Query: 483  GFTQKKDINFFDTYSPVSKIAIIRTLIALVAIHNLVIQQMDVKTAFLNVDLNEEIYVEQP 662
            GFTQK +I++FDT++PV++I+ IR L+AL +IH LVI QMDVKT FLN +L EEIY+ QP
Sbjct: 840  GFTQKHNIDYFDTFAPVTRISSIRVLLALASIHKLVIHQMDVKTTFLNGELEEEIYMTQP 899

Query: 663  *GFIVSGQESKVCKLRKSLYGLKQGPKQWYEKFDQILISNGYTVNTSDFCVYSKMFDSNC 842
             G +V GQ+ KVCKL KSLYGLKQ PKQW+EK D +L+  G++ N +D CVYS+  +   
Sbjct: 900  EGCVVLGQKEKVCKLLKSLYGLKQAPKQWHEKLDNVLLCEGFSTNDADKCVYSRSENGEY 959

Query: 843  VIICLYVDDMLIFCTNLSVVKEAKAFLSTQFDMKDLGEVDVILRIKVNKTVNGFSLSQSH 1022
            VIICLYVDDMLIF T   +V + K FL ++F+MKD+GE  VIL +K+ +  +   LSQ  
Sbjct: 960  VIICLYVDDMLIFGTCNDIVFKTKLFLGSKFEMKDMGEASVILGVKIIRKGDSILLSQEK 1019

Query: 1023 YIEKMLRKFNSFDVVPVRTPYDSSISLKKNKGPSISQTEYAKIIGSVMFLMNYARPDIAY 1202
            Y EK+L+KF  +D   V TPYD++  LKKN+G SISQT+YA+IIGS++ LM+++RPDIAY
Sbjct: 1020 YTEKLLKKFGYYDFKSVSTPYDANSKLKKNRGESISQTQYAQIIGSLLHLMSFSRPDIAY 1079

Query: 1203 VVSRLSRYTHNPSNKH*NALHHLLRYLKGTIDWCLHFNKFSAVLEGFCDANWFFANSEVS 1382
             V RLSR T  PS  H  AL  L++YL+GT+D+ + ++ F AVLEG+ DANW   + E  
Sbjct: 1080 AVGRLSRCTQCPSQDHWEALARLMKYLRGTMDYAIEYSGFPAVLEGYSDANWISDSDETK 1139

Query: 1383 STCGYVFTLGGGAISWKSAKQTCIAGSTMESEFIALELAGQEAEWLRNILADIPMWGRSS 1562
            ST GYVFTLGGGA++W+SA+QT IA STMESEF+ALE+AG EAEWL+N LA+IP+  + +
Sbjct: 1140 STSGYVFTLGGGAVTWRSARQTIIARSTMESEFVALEMAGSEAEWLKNFLANIPLGMKPT 1199

Query: 1563 VPVSLHCDSQTAIGIAKNSVYNGKRRHIRIRHSAVKQLLKTGVISLEYMRSERNLAEPLT 1742
              VS+HCD Q+AI IAKN  YNGK RHI++RH+ VKQLLK+G IS++Y++SER+LA+PLT
Sbjct: 1200 PSVSMHCDCQSAIAIAKNKSYNGKNRHIQLRHNLVKQLLKSGTISIDYVKSERDLADPLT 1259

Query: 1743 KELVRKIVFESARGAGLKP 1799
            K L RK++ E++RG GLKP
Sbjct: 1260 KPLGRKMILETSRGMGLKP 1278



 Score = 37.4 bits (85), Expect(2) = e-174
 Identities = 24/71 (33%), Positives = 34/71 (47%)
 Frame = +1

Query: 4   ESRDAEFFELTFPLKKNACXXXXXXXXXXXXXXXXLFEPVNETRRNKRRRIENKFGPDFI 183
           E+++AEFFE  FPLK +                        + RR+KR+R E  FG DF 
Sbjct: 710 ETKNAEFFEHIFPLKSSGTSEQPIDSVSDTLS--------EDVRRSKRQRKETSFGNDFY 761

Query: 184 TSFLAENPDLN 216
           T +L EN  ++
Sbjct: 762 T-YLVENDPIS 771


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  577 bits (1487), Expect = e-162
 Identities = 278/505 (55%), Positives = 379/505 (75%)
 Frame = +3

Query: 285  KSITPIDASFWKEAIKSKLDSIMTNYTWDLVDLLKGSKPIKCK*IFRRKLKPDGTIEKFK 464
            +++   +   WKEAIKS++DSI+ N+TW+LV+L  G KP+  K IF+RK+K DG+I+K+K
Sbjct: 770  EAVNSTEGLMWKEAIKSEIDSILQNHTWELVBLPLGCKPLSSKWIFKRKMKVDGSIDKYK 829

Query: 465  ARLVVVGFTQKKDINFFDTYSPVSKIAIIRTLIALVAIHNLVIQQMDVKTAFLNVDLNEE 644
            ARLV+ G+ Q + +++FDTYSPV++I  IR ++A+ A+ NL I QMDVKTAFLN DL+EE
Sbjct: 830  ARLVIKGYRQTEGLDYFDTYSPVTRINSIRMVLAIAALRNLEIHQMDVKTAFLNGDLDEE 889

Query: 645  IYVEQP*GFIVSGQESKVCKLRKSLYGLKQGPKQWYEKFDQILISNGYTVNTSDFCVYSK 824
            IY+EQP GF   GQE KVCKL KSLYGLKQ PKQW+EKFD +++S+G+ +N  D CVY K
Sbjct: 890  IYMEQPEGFSAPGQEKKVCKLVKSLYGLKQAPKQWHEKFDNVMLSHGFKINECDKCVYVK 949

Query: 825  MFDSNCVIICLYVDDMLIFCTNLSVVKEAKAFLSTQFDMKDLGEVDVILRIKVNKTVNGF 1004
              +   VI+CLYVDDMLI  ++  ++   K  L+++FDMKD+G  DVIL IK+ +T +  
Sbjct: 950  DTEHGYVIVCLYVDDMLIVGSDDKMITSTKNMLNSRFDMKDMGLADVILGIKIKRTSBEL 1009

Query: 1005 SLSQSHYIEKMLRKFNSFDVVPVRTPYDSSISLKKNKGPSISQTEYAKIIGSVMFLMNYA 1184
             LSQSHY++K+L KF+  +    RTP D ++ L KNKG S+SQ EY++IIGS+M+LM+  
Sbjct: 1010 ILSQSHYVDKILGKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSRIIGSLMYLMSCT 1069

Query: 1185 RPDIAYVVSRLSRYTHNPSNKH*NALHHLLRYLKGTIDWCLHFNKFSAVLEGFCDANWFF 1364
            RPDIAY VS+LSRYT NP  KH   +  +L+YL+ T D+ LH+ ++ AVLEG+ DANW  
Sbjct: 1070 RPDIAYAVSKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAVLEGYSDANWIS 1129

Query: 1365 ANSEVSSTCGYVFTLGGGAISWKSAKQTCIAGSTMESEFIALELAGQEAEWLRNILADIP 1544
               +  S  GYVFTLGG A+SWKS+KQ  IA STMESEFIAL+  G+EAEWLR+ L DIP
Sbjct: 1130 NVKDSKSHSGYVFTLGGAAVSWKSSKQXVIARSTMESEFIALDKCGEEAEWLRHFLEDIP 1189

Query: 1545 MWGRSSVPVSLHCDSQTAIGIAKNSVYNGKRRHIRIRHSAVKQLLKTGVISLEYMRSERN 1724
             W +   P+ +HCDSQ+AIG A++++YNGK RHI  RH+ ++QLL TGVIS++Y++S+ N
Sbjct: 1190 RWSKPVPPICIHCDSQSAIGRAQSNMYNGKSRHIXRRHNTIRQLLSTGVISVDYVKSKDN 1249

Query: 1725 LAEPLTKELVRKIVFESARGAGLKP 1799
            +A+PLTK L R++V +S+RG  LKP
Sbjct: 1250 IADPLTKGLNRELVEKSSRGMXLKP 1274


>emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera]
          Length = 1096

 Score =  576 bits (1484), Expect = e-161
 Identities = 294/509 (57%), Positives = 369/509 (72%), Gaps = 1/509 (0%)
 Frame = +3

Query: 276  RGYKS-ITPIDASFWKEAIKSKLDSIMTNYTWDLVDLLKGSKPIKCK*IFRRKLKPDGTI 452
            R YK  IT +DASFWKEAI S+++SIM N+TW+LV+L  G+K I CK IF+RKLK DG+I
Sbjct: 606  RSYKEVITSLDASFWKEAINSEIESIMCNHTWELVNLPPGAKTIGCKWIFKRKLKQDGSI 665

Query: 453  EKFKARLVVVGFTQKKDINFFDTYSPVSKIAIIRTLIALVAIHNLVIQQMDVKTAFLNVD 632
            EK+KARLV  GF Q+KD+++FDT++PV++IA IR LIAL +IHNLVI QMDVK AFLN D
Sbjct: 666  EKYKARLVAKGFKQRKDVDYFDTFAPVTRIASIRVLIALASIHNLVIHQMDVKIAFLNGD 725

Query: 633  LNEEIYVEQP*GFIVSGQESKVCKLRKSLYGLKQGPKQWYEKFDQILISNGYTVNTSDFC 812
            L EEIY++QP G +V  +E  VCKL KS YGL Q PKQW+ KFD                
Sbjct: 726  LEEEIYMDQPEGCVVPRKEKNVCKLVKSPYGLTQAPKQWHNKFDHF-------------- 771

Query: 813  VYSKMFDSNCVIICLYVDDMLIFCTNLSVVKEAKAFLSTQFDMKDLGEVDVILRIKVNKT 992
               K  D+ CV+ICLY+DDMLIF TNL VV E K FL ++FDMKDLGE +VIL IK+ +T
Sbjct: 772  ---KYEDNTCVVICLYIDDMLIFGTNLEVVCETKKFLGSKFDMKDLGEAEVILGIKITRT 828

Query: 993  VNGFSLSQSHYIEKMLRKFNSFDVVPVRTPYDSSISLKKNKGPSISQTEYAKIIGSVMFL 1172
             NG  LSQ HY+EK+LRKF  FD  PV TPYD +  LKKN+  S++Q EYA+IIGS+M+L
Sbjct: 829  PNGLKLSQEHYVEKILRKFEHFDCKPVSTPYDPNSQLKKNREHSVAQIEYAQIIGSLMYL 888

Query: 1173 MNYARPDIAYVVSRLSRYTHNPSNKH*NALHHLLRYLKGTIDWCLHFNKFSAVLEGFCDA 1352
            MNY RPDIAY               H   +  +L+YL+GTI++ L F+ F +VLEGF DA
Sbjct: 889  MNYTRPDIAYA-------------DHWTVVRRVLKYLRGTINYGLCFSGFPSVLEGFSDA 935

Query: 1353 NWFFANSEVSSTCGYVFTLGGGAISWKSAKQTCIAGSTMESEFIALELAGQEAEWLRNIL 1532
            NW   + E+ ST GYVF LGG A+SWKSAKQTCI  S ME++FIALE A  E EWLRN+L
Sbjct: 936  NWILDSDEMKSTSGYVFILGGSAVSWKSAKQTCITQSIMEAKFIALENASSEVEWLRNLL 995

Query: 1533 ADIPMWGRSSVPVSLHCDSQTAIGIAKNSVYNGKRRHIRIRHSAVKQLLKTGVISLEYMR 1712
             DIP+W R ++ +S+ CDSQ AI  AK+ ++NGK RHI +RH+ V QLL+TGVISLE++R
Sbjct: 996  TDIPLWTRPALSMSICCDSQAAIAKAKSKIFNGKNRHICLRHNIVWQLLETGVISLEFVR 1055

Query: 1713 SERNLAEPLTKELVRKIVFESARGAGLKP 1799
            S+ NLA+ LTK L +K+V E++RG GL P
Sbjct: 1056 SKLNLADSLTKPLNKKLVEETSRGMGLMP 1084


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  556 bits (1434), Expect(2) = e-160
 Identities = 271/505 (53%), Positives = 370/505 (73%)
 Frame = +3

Query: 285  KSITPIDASFWKEAIKSKLDSIMTNYTWDLVDLLKGSKPIKCK*IFRRKLKPDGTIEKFK 464
            +++   +   WKEAIKS++DSI+ N+TW+LVDL  G KP+  K IF+RK+K DG+I+K+K
Sbjct: 819  EAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLPPGCKPLSSKWIFKRKMKVDGSIDKYK 878

Query: 465  ARLVVVGFTQKKDINFFDTYSPVSKIAIIRTLIALVAIHNLVIQQMDVKTAFLNVDLNEE 644
            ARLV+ G+ Q + +++FDTYSPV++I  IR ++A+ A+ NL I QMD+K          E
Sbjct: 879  ARLVIKGYRQTEGLDYFDTYSPVTRINSIRMVLAIAALRNLEIHQMDMK----------E 928

Query: 645  IYVEQP*GFIVSGQESKVCKLRKSLYGLKQGPKQWYEKFDQILISNGYTVNTSDFCVYSK 824
            IY+EQP GF   GQE KVCKL KSLYGLKQ PKQW+EKFD +++S+G+ +N  D CVY K
Sbjct: 929  IYMEQPEGFSAPGQEKKVCKLVKSLYGLKQAPKQWHEKFDNVMLSHGFKINECDKCVYVK 988

Query: 825  MFDSNCVIICLYVDDMLIFCTNLSVVKEAKAFLSTQFDMKDLGEVDVILRIKVNKTVNGF 1004
              +   VI+CLYVDDMLI  ++  ++   K  L+++FDMKD+G  DVIL IK+ +T N  
Sbjct: 989  DTEHGYVIVCLYVDDMLIVGSDDKMITSTKNMLNSRFDMKDMGLADVILGIKIKRTSNEL 1048

Query: 1005 SLSQSHYIEKMLRKFNSFDVVPVRTPYDSSISLKKNKGPSISQTEYAKIIGSVMFLMNYA 1184
             LSQSHY++K+L KF+  +    RTP D ++ L KNKG S+SQ EY++IIGS+M+LM+  
Sbjct: 1049 ILSQSHYVDKILGKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSRIIGSLMYLMSCT 1108

Query: 1185 RPDIAYVVSRLSRYTHNPSNKH*NALHHLLRYLKGTIDWCLHFNKFSAVLEGFCDANWFF 1364
            RPDIAY V +LSRYT NP  KH   +  +L+YL+ T D+ LH+ ++ AVLEG+ DANW  
Sbjct: 1109 RPDIAYAVGKLSRYTSNPGAKHWQGIIRVLKYLRFTRDYXLHYTRYPAVLEGYSDANWIS 1168

Query: 1365 ANSEVSSTCGYVFTLGGGAISWKSAKQTCIAGSTMESEFIALELAGQEAEWLRNILADIP 1544
               +  S  GYVFTLGG A+SWKS+KQT IA STMESEFIAL+  G+EAEWLR+ L DIP
Sbjct: 1169 NVKDSKSHSGYVFTLGGAAVSWKSSKQTVIARSTMESEFIALDKCGEEAEWLRHFLEDIP 1228

Query: 1545 MWGRSSVPVSLHCDSQTAIGIAKNSVYNGKRRHIRIRHSAVKQLLKTGVISLEYMRSERN 1724
             W +   P+ +HCDSQ+AIG A++++YNGK RHIR RH+ ++QLL TGVIS++Y++S+ N
Sbjct: 1229 RWSKPVPPICIHCDSQSAIGRAQSNMYNGKSRHIRRRHNTIRQLLSTGVISVDYVKSKDN 1288

Query: 1725 LAEPLTKELVRKIVFESARGAGLKP 1799
            +A+PLTK L R++V +S+ G  LKP
Sbjct: 1289 IADPLTKGLNRELVEKSSXGMXLKP 1313



 Score = 38.5 bits (88), Expect(2) = e-160
 Identities = 26/68 (38%), Positives = 29/68 (42%)
 Frame = +1

Query: 4   ESRDAEFFELTFPLKKNACXXXXXXXXXXXXXXXXLFEPVNETRRNKRRRIENKFGPDFI 183
           ESR+A FFE  FP K                      E   E RR+KR R E  FGPDF+
Sbjct: 750 ESRNASFFEDVFPCKSKEEPSSSKRMLESQDQNE---EVEVEPRRSKRVRTEKSFGPDFL 806

Query: 184 TSFLAENP 207
           T  L   P
Sbjct: 807 TFMLEGEP 814


>emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]
          Length = 1105

 Score =  563 bits (1452), Expect = e-158
 Identities = 272/498 (54%), Positives = 362/498 (72%)
 Frame = +3

Query: 303  DASFWKEAIKSKLDSIMTNYTWDLVDLLKGSKPIKCK*IFRRKLKPDGTIEKFKARLVVV 482
            D +FWKEAI  ++DSIM+N TW+LVDL  GSKPI CK +FRRK   DG I+ FKARLV  
Sbjct: 605  DVAFWKEAINDEMDSIMSNQTWELVDLPPGSKPIGCKWVFRRKYHTDGMIQTFKARLVAK 664

Query: 483  GFTQKKDINFFDTYSPVSKIAIIRTLIALVAIHNLVIQQMDVKTAFLNVDLNEEIYVEQP 662
            GF Q++ I++FDTY+PV++   IR L AL +IHNL + QMDVKTAFLN DLNEE+Y+EQP
Sbjct: 665  GFKQREGIDYFDTYAPVARTTSIRILFALASIHNLFVHQMDVKTAFLNGDLNEEVYMEQP 724

Query: 663  *GFIVSGQESKVCKLRKSLYGLKQGPKQWYEKFDQILISNGYTVNTSDFCVYSKMFDSNC 842
             GF++ G E+KVCKL KSLYGLKQ PKQW+EKFD  ++S+G+  N +D C+YSK  +   
Sbjct: 725  EGFVLPGNENKVCKLVKSLYGLKQAPKQWHEKFDHAILSBGFRHNNADKCLYSKTCBDYM 784

Query: 843  VIICLYVDDMLIFCTNLSVVKEAKAFLSTQFDMKDLGEVDVILRIKVNKTVNGFSLSQSH 1022
            +I+CLYVDDMLI   ++  + E K FLS+ F MKDLGEVD IL IKV +   G++L+Q+H
Sbjct: 785  IIVCLYVDDMLILSDDMRGIIETKRFLSSTFKMKDLGEVDTILGIKVKRNSGGYALNQTH 844

Query: 1023 YIEKMLRKFNSFDVVPVRTPYDSSISLKKNKGPSISQTEYAKIIGSVMFLMNYARPDIAY 1202
            YIEK++ KF+   +    TP+DSSI L+KN G S++Q EYA  IGS+M+     R DI++
Sbjct: 845  YIEKVVSKFSHLKIKDANTPFDSSIKLEKNDGRSVAQLEYASAIGSLMYAAQCTRADISF 904

Query: 1203 VVSRLSRYTHNPSNKH*NALHHLLRYLKGTIDWCLHFNKFSAVLEGFCDANWFFANSEVS 1382
             VS+LSR+T NPS +H  A+  +L YL+ T +  L ++KF A++EG+ DA+W  +  +  
Sbjct: 905  AVSKLSRFTSNPSVEHWKAIGRVLSYLRNTKELSLQYSKFPAIIEGYSDASWISSVGDNL 964

Query: 1383 STCGYVFTLGGGAISWKSAKQTCIAGSTMESEFIALELAGQEAEWLRNILADIPMWGRSS 1562
            ST G+VFTLGGGA+SW S KQTCI+ STME+EFIAL    +EAEWLR+++ DIP    + 
Sbjct: 965  STTGWVFTLGGGAVSWGSKKQTCISHSTMEAEFIALAATRKEAEWLRDLMMDIPFTANNV 1024

Query: 1563 VPVSLHCDSQTAIGIAKNSVYNGKRRHIRIRHSAVKQLLKTGVISLEYMRSERNLAEPLT 1742
              VS+HCDSQ  +  A + VYNGK RHI IRH  V+QL++ G+IS+ ++RS  NLA+P T
Sbjct: 1025 STVSIHCDSQATLARAYSGVYNGKSRHISIRHEYVRQLIQNGIISISFVRSSGNLADPFT 1084

Query: 1743 KELVRKIVFESARGAGLK 1796
            K L R +V  ++RG GLK
Sbjct: 1085 KPLTRDLVRITSRGMGLK 1102


>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  550 bits (1416), Expect(2) = e-156
 Identities = 269/514 (52%), Positives = 374/514 (72%), Gaps = 1/514 (0%)
 Frame = +3

Query: 261  PKNM*RGYKSITPIDASFWKEAIKSKLDSIMTNYTWDLVDLLKGSKPIKCK*IFRRKLKP 440
            PK++   Y S    DA +WKEA++S++DSI+ N TW++ +   G KP+ CK +F++KL+P
Sbjct: 791  PKSISEAYASP---DADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRP 847

Query: 441  DGTIEKFKARLVVVGFTQKKDINFFDTYSPVSKIAIIRTLIALVAIHNLVIQQMDVKTAF 620
            DGTIEK+KARLV  G+TQK+  +FFDTYSPV+++  IR L++L A H L++ QMDVKTAF
Sbjct: 848  DGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 907

Query: 621  LNVDLNEEIYVEQP*GFIVSGQESKVCKLRKSLYGLKQGPKQWYEKFDQILISNGYTVNT 800
            LN +L+EEIY++QP GF++ GQE KVCKL KSLYGLKQ PKQW+EKFD+ L S G+ VN 
Sbjct: 908  LNGELDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNE 967

Query: 801  SDFCVYSKMFDSNCVIICLYVDDMLIFCTNLSVVKEAKAFLSTQFDMKDLGEVDVILRIK 980
            +D CVY +      VI+CLYVDD+LIF TN+ V+ E K+FLS  FDMKDLG  DVIL IK
Sbjct: 968  ADKCVYYRHGGGEGVILCLYVDDILIFGTNIEVINEVKSFLSQNFDMKDLGVADVILNIK 1027

Query: 981  VNKTVNGFSLSQSHYIEKMLRKFNSFDVVPVRTPYDSSISLKKNKGPSISQTEYAKIIGS 1160
            + +  NG +L QSHY+EK+L +F   D  P  TPYD S+SL+KNK  + +Q EY++IIGS
Sbjct: 1028 LIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGS 1087

Query: 1161 VMFLMNYARPDIAYVVSRLSRYTHNPSNKH*NALHHLLRYLKGTIDWCLHFNKFSAVLEG 1340
            +M+L +  RPDI++ VS+LSR+T NP + H  AL  ++RYLKGT++  LH+  + AVLEG
Sbjct: 1088 LMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEG 1147

Query: 1341 FCDANWFFANSEVSSTCGYVFTLGGGAISWKSAKQTCIAGSTMESEFIALELAGQEAEWL 1520
            + D+NW     E+ +T GYVFTLGGGA+SW+S KQT +  STME+E  AL+ A  EAEWL
Sbjct: 1148 YSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWL 1207

Query: 1521 RNILADIPMWGRSSVPVSLHCDSQTAIGIAKNSVYNGK-RRHIRIRHSAVKQLLKTGVIS 1697
            R++L D+P+  +    + ++CD+QT I    NS  N K  RH++ R  +V++L  +GVI+
Sbjct: 1208 RDLLMDLPVVEKPVPAILMNCDNQTVIVKVNNSKDNMKSSRHVKRRLKSVRKLRNSGVIT 1267

Query: 1698 LEYMRSERNLAEPLTKELVRKIVFESARGAGLKP 1799
            L+Y+++ RNLA+P TK L R ++  +++  GL+P
Sbjct: 1268 LDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1301



 Score = 32.0 bits (71), Expect(2) = e-156
 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
 Frame = +1

Query: 4   ESRDAEFFELTFPLK-----KNACXXXXXXXXXXXXXXXXLFEPVNE------TRRNKRR 150
           ESRDA FFE  FP+K      N                    E V+E       RR+KR+
Sbjct: 713 ESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQ 772

Query: 151 RIENKFGPDFITSFLAENP 207
           R    FG DF    + + P
Sbjct: 773 RTAKSFGDDFTVYLVDDTP 791


>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  548 bits (1413), Expect(2) = e-156
 Identities = 269/514 (52%), Positives = 374/514 (72%), Gaps = 1/514 (0%)
 Frame = +3

Query: 261  PKNM*RGYKSITPIDASFWKEAIKSKLDSIMTNYTWDLVDLLKGSKPIKCK*IFRRKLKP 440
            PK++   Y S    DA +WKEA++S++DSI+ N TW++ +   G KP+ CK +F++KL+P
Sbjct: 791  PKSISEAYASP---DADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRP 847

Query: 441  DGTIEKFKARLVVVGFTQKKDINFFDTYSPVSKIAIIRTLIALVAIHNLVIQQMDVKTAF 620
            DGTIEK+KARLV  G+TQK+  +FFDTYSPV+++  IR L++L A H L++ QMDVKTAF
Sbjct: 848  DGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 907

Query: 621  LNVDLNEEIYVEQP*GFIVSGQESKVCKLRKSLYGLKQGPKQWYEKFDQILISNGYTVNT 800
            LN +L+EEIY++QP GF+V GQE KVCKL KSLYGLKQ PKQW+EKFD+ L S G+ VN 
Sbjct: 908  LNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNE 967

Query: 801  SDFCVYSKMFDSNCVIICLYVDDMLIFCTNLSVVKEAKAFLSTQFDMKDLGEVDVILRIK 980
            +D CVY +      VI+CLYVDD+LIF TNL V+ E K+FLS  FDMKDLG  DVIL IK
Sbjct: 968  ADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIK 1027

Query: 981  VNKTVNGFSLSQSHYIEKMLRKFNSFDVVPVRTPYDSSISLKKNKGPSISQTEYAKIIGS 1160
            + +  NG +L QSHY+EK+L +F   D  P  TPYD S+ L+KNK  + +Q EY++IIGS
Sbjct: 1028 LIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGS 1087

Query: 1161 VMFLMNYARPDIAYVVSRLSRYTHNPSNKH*NALHHLLRYLKGTIDWCLHFNKFSAVLEG 1340
            +M+L +  RPDI++ VS+LSR+T NP + H  AL  ++RYLKGT++  LH+ ++ AVLEG
Sbjct: 1088 LMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTRYPAVLEG 1147

Query: 1341 FCDANWFFANSEVSSTCGYVFTLGGGAISWKSAKQTCIAGSTMESEFIALELAGQEAEWL 1520
            + D+NW     E+ +T GYVFTLGGGA+SW+S KQT +  STME+E  AL+ A  EAEWL
Sbjct: 1148 YSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWL 1207

Query: 1521 RNILADIPMWGRSSVPVSLHCDSQTAIGIAKNSVYNGK-RRHIRIRHSAVKQLLKTGVIS 1697
            R++L D+P+  +    + ++CD+QT I    +S  N K  RH++ R  +V++L  +GVI+
Sbjct: 1208 RDLLMDLPVVEKLVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVIT 1267

Query: 1698 LEYMRSERNLAEPLTKELVRKIVFESARGAGLKP 1799
            L+Y+++ RNLA+P TK L R ++  +++  GL+P
Sbjct: 1268 LDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1301



 Score = 32.0 bits (71), Expect(2) = e-156
 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
 Frame = +1

Query: 4   ESRDAEFFELTFPLK-----KNACXXXXXXXXXXXXXXXXLFEPVNE------TRRNKRR 150
           ESRDA FFE  FP+K      N                    E V+E       RR+KR+
Sbjct: 713 ESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQ 772

Query: 151 RIENKFGPDFITSFLAENP 207
           R    FG DF    + + P
Sbjct: 773 RTAKSFGDDFTVYLVDDTP 791


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  548 bits (1413), Expect(2) = e-156
 Identities = 269/514 (52%), Positives = 374/514 (72%), Gaps = 1/514 (0%)
 Frame = +3

Query: 261  PKNM*RGYKSITPIDASFWKEAIKSKLDSIMTNYTWDLVDLLKGSKPIKCK*IFRRKLKP 440
            PK++   Y S    DA +WKEA++S++DSI+ N TW++ +   G KP+ CK +F++KL+P
Sbjct: 791  PKSISEAYASP---DADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRP 847

Query: 441  DGTIEKFKARLVVVGFTQKKDINFFDTYSPVSKIAIIRTLIALVAIHNLVIQQMDVKTAF 620
            DGTIEK+KARLV  G+TQK+  +FFDTYSPV+++  IR L++L A H L++ QMDVKTAF
Sbjct: 848  DGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 907

Query: 621  LNVDLNEEIYVEQP*GFIVSGQESKVCKLRKSLYGLKQGPKQWYEKFDQILISNGYTVNT 800
            LN +L+EEIY++QP GF++ GQE KVCKL KSLYGLKQ PKQW+EKFD+ L S G+ VN 
Sbjct: 908  LNGELDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNE 967

Query: 801  SDFCVYSKMFDSNCVIICLYVDDMLIFCTNLSVVKEAKAFLSTQFDMKDLGEVDVILRIK 980
            +D CVY +      VI+CLYVDD+LIF TNL V+ E K+FLS  FDMKDLG  DVIL IK
Sbjct: 968  ADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIK 1027

Query: 981  VNKTVNGFSLSQSHYIEKMLRKFNSFDVVPVRTPYDSSISLKKNKGPSISQTEYAKIIGS 1160
            + +  NG +L QSHY+EK+L +F   D  P  TPYD S+SL+KNK  + +Q EY++IIGS
Sbjct: 1028 LIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGS 1087

Query: 1161 VMFLMNYARPDIAYVVSRLSRYTHNPSNKH*NALHHLLRYLKGTIDWCLHFNKFSAVLEG 1340
            +M+L +  RPDI++ VS+LSR+T NP + H  AL  ++RYLKGT++  LH+  + AVLEG
Sbjct: 1088 LMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEG 1147

Query: 1341 FCDANWFFANSEVSSTCGYVFTLGGGAISWKSAKQTCIAGSTMESEFIALELAGQEAEWL 1520
            + D+NW     E+ +T GYVFTLGGGA+SW+S KQT +  STME+E  AL+ A  EAEWL
Sbjct: 1148 YSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWL 1207

Query: 1521 RNILADIPMWGRSSVPVSLHCDSQTAIGIAKNSVYNGK-RRHIRIRHSAVKQLLKTGVIS 1697
            R++L D+P+  +    + ++CD+QT I    +S  N K  RH++ R  +V++L  +GVI+
Sbjct: 1208 RDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVIT 1267

Query: 1698 LEYMRSERNLAEPLTKELVRKIVFESARGAGLKP 1799
            L+Y+++ RNLA+P TK L R ++  +++  GL+P
Sbjct: 1268 LDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1301



 Score = 32.0 bits (71), Expect(2) = e-156
 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
 Frame = +1

Query: 4   ESRDAEFFELTFPLK-----KNACXXXXXXXXXXXXXXXXLFEPVNE------TRRNKRR 150
           ESRDA FFE  FP+K      N                    E V+E       RR+KR+
Sbjct: 713 ESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQ 772

Query: 151 RIENKFGPDFITSFLAENP 207
           R    FG DF    + + P
Sbjct: 773 RTAKSFGDDFTVYLVDDTP 791


>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
            Group]
          Length = 1911

 Score =  547 bits (1410), Expect(2) = e-155
 Identities = 268/514 (52%), Positives = 373/514 (72%), Gaps = 1/514 (0%)
 Frame = +3

Query: 261  PKNM*RGYKSITPIDASFWKEAIKSKLDSIMTNYTWDLVDLLKGSKPIKCK*IFRRKLKP 440
            PK++   Y S    DA +WKEA++S++DSI+ N TW++ +   G KP+ CK +F++KL+P
Sbjct: 791  PKSISEAYASP---DADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRP 847

Query: 441  DGTIEKFKARLVVVGFTQKKDINFFDTYSPVSKIAIIRTLIALVAIHNLVIQQMDVKTAF 620
            DGTIEK+KARLV  G+TQK+  +FFDTYSPV+++  IR L++L A H L++ QMDVKTAF
Sbjct: 848  DGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 907

Query: 621  LNVDLNEEIYVEQP*GFIVSGQESKVCKLRKSLYGLKQGPKQWYEKFDQILISNGYTVNT 800
            LN +L+EEIY++QP GF++ GQE KVCKL KSLYGLKQ PKQW+EKFD+ L   G+ VN 
Sbjct: 908  LNGELDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTFAGFAVNE 967

Query: 801  SDFCVYSKMFDSNCVIICLYVDDMLIFCTNLSVVKEAKAFLSTQFDMKDLGEVDVILRIK 980
            +D CVY +      VI+CLYVDD+LIF TN+ V+ E K+FLS  FDMKDLG  DVIL IK
Sbjct: 968  ADKCVYYRHGGGEGVILCLYVDDILIFGTNIEVINEVKSFLSQNFDMKDLGVADVILNIK 1027

Query: 981  VNKTVNGFSLSQSHYIEKMLRKFNSFDVVPVRTPYDSSISLKKNKGPSISQTEYAKIIGS 1160
            + +  NG +L QSHY+EK+L +F   D  P  TPYD S+SL+KNK  + +Q EY++IIGS
Sbjct: 1028 LIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGS 1087

Query: 1161 VMFLMNYARPDIAYVVSRLSRYTHNPSNKH*NALHHLLRYLKGTIDWCLHFNKFSAVLEG 1340
            +M+L +  RPDI++ VS+LSR+T NP + H  AL  ++RYLKGT++  LH+  + AVLEG
Sbjct: 1088 LMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEG 1147

Query: 1341 FCDANWFFANSEVSSTCGYVFTLGGGAISWKSAKQTCIAGSTMESEFIALELAGQEAEWL 1520
            + D+NW     E+ +T GYVFTLGGGA+SW+S KQT +  STME+E  AL+ A  EAEWL
Sbjct: 1148 YSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWL 1207

Query: 1521 RNILADIPMWGRSSVPVSLHCDSQTAIGIAKNSVYNGK-RRHIRIRHSAVKQLLKTGVIS 1697
            R++L D+P+  +    + ++CD+QT I    NS  N K  RH++ R  +V++L  +GVI+
Sbjct: 1208 RDLLMDLPVVEKPVPAILMNCDNQTVIVKVNNSKDNMKSSRHVKRRLKSVRKLRNSGVIT 1267

Query: 1698 LEYMRSERNLAEPLTKELVRKIVFESARGAGLKP 1799
            L+Y+++ RNLA+P TK L R ++  +++  GL+P
Sbjct: 1268 LDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1301



 Score = 32.0 bits (71), Expect(2) = e-155
 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
 Frame = +1

Query: 4   ESRDAEFFELTFPLK-----KNACXXXXXXXXXXXXXXXXLFEPVNE------TRRNKRR 150
           ESRDA FFE  FP+K      N                    E V+E       RR+KR+
Sbjct: 713 ESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQ 772

Query: 151 RIENKFGPDFITSFLAENP 207
           R    FG DF    + + P
Sbjct: 773 RTAKSFGDDFTVYLVDDTP 791


>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1518

 Score =  547 bits (1410), Expect(2) = e-155
 Identities = 269/514 (52%), Positives = 373/514 (72%), Gaps = 1/514 (0%)
 Frame = +3

Query: 261  PKNM*RGYKSITPIDASFWKEAIKSKLDSIMTNYTWDLVDLLKGSKPIKCK*IFRRKLKP 440
            PK++   Y S    DA +WKEA++S++DSI+ N TW++ +   G KP+ CK +F++KL+P
Sbjct: 1007 PKSISEAYASP---DADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRP 1063

Query: 441  DGTIEKFKARLVVVGFTQKKDINFFDTYSPVSKIAIIRTLIALVAIHNLVIQQMDVKTAF 620
            DGTIEK+KARLV  G+TQK+  +FFDTYSPV+++  IR L++L A H L++ QMDVKTAF
Sbjct: 1064 DGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 1123

Query: 621  LNVDLNEEIYVEQP*GFIVSGQESKVCKLRKSLYGLKQGPKQWYEKFDQILISNGYTVNT 800
            LN +L+EEIY++QP GF+V GQE KVCKL KSLYGLKQ PKQW+EKFD+ L S G+ VN 
Sbjct: 1124 LNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNE 1183

Query: 801  SDFCVYSKMFDSNCVIICLYVDDMLIFCTNLSVVKEAKAFLSTQFDMKDLGEVDVILRIK 980
            +D CVY +      VI+CLYVDD+LIF TNL V+ E K+FLS  FDMKDLG  DVIL IK
Sbjct: 1184 ADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIK 1243

Query: 981  VNKTVNGFSLSQSHYIEKMLRKFNSFDVVPVRTPYDSSISLKKNKGPSISQTEYAKIIGS 1160
            + +  NG +L QSHY+EK+L +F   D  P  TPYD S+ L+KNK  + +Q EY++IIGS
Sbjct: 1244 LIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGS 1303

Query: 1161 VMFLMNYARPDIAYVVSRLSRYTHNPSNKH*NALHHLLRYLKGTIDWCLHFNKFSAVLEG 1340
            +M+L +  RPDI++ VS+LSR+T NP + H  AL  ++RYLKGT++  LH+  + AVLEG
Sbjct: 1304 LMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEG 1363

Query: 1341 FCDANWFFANSEVSSTCGYVFTLGGGAISWKSAKQTCIAGSTMESEFIALELAGQEAEWL 1520
            + D+NW     E+ +T GYVFTLGGGA+SW+S KQT +  STME+E  AL+ A  EAEWL
Sbjct: 1364 YSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWL 1423

Query: 1521 RNILADIPMWGRSSVPVSLHCDSQTAIGIAKNSVYNGK-RRHIRIRHSAVKQLLKTGVIS 1697
            R++L D+P+  +    + ++CD+QT I    +S  N K  RH++ R  +V++L  +GVI+
Sbjct: 1424 RDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVIT 1483

Query: 1698 LEYMRSERNLAEPLTKELVRKIVFESARGAGLKP 1799
            L+Y+++ RNLA+P TK L R ++  +++  GL+P
Sbjct: 1484 LDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1517



 Score = 32.0 bits (71), Expect(2) = e-155
 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
 Frame = +1

Query: 4    ESRDAEFFELTFPLK-----KNACXXXXXXXXXXXXXXXXLFEPVNE------TRRNKRR 150
            ESRDA FFE  FP+K      N                    E V+E       RR+KR+
Sbjct: 929  ESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQ 988

Query: 151  RIENKFGPDFITSFLAENP 207
            R    FG DF    + + P
Sbjct: 989  RTAKSFGDDFTVYLVDDTP 1007


>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1391

 Score =  547 bits (1410), Expect(2) = e-155
 Identities = 269/514 (52%), Positives = 373/514 (72%), Gaps = 1/514 (0%)
 Frame = +3

Query: 261  PKNM*RGYKSITPIDASFWKEAIKSKLDSIMTNYTWDLVDLLKGSKPIKCK*IFRRKLKP 440
            PK++   Y S    DA +WKEA++S++DSI+ N TW++ +   G KP+ CK +F++KL+P
Sbjct: 880  PKSISEAYASP---DADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRP 936

Query: 441  DGTIEKFKARLVVVGFTQKKDINFFDTYSPVSKIAIIRTLIALVAIHNLVIQQMDVKTAF 620
            DGTIEK+KARLV  G+TQK+  +FFDTYSPV+++  IR L++L A H L++ QMDVKTAF
Sbjct: 937  DGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 996

Query: 621  LNVDLNEEIYVEQP*GFIVSGQESKVCKLRKSLYGLKQGPKQWYEKFDQILISNGYTVNT 800
            LN +L+EEIY++QP GF+V GQE KVCKL KSLYGLKQ PKQW+EKFD+ L S G+ VN 
Sbjct: 997  LNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNE 1056

Query: 801  SDFCVYSKMFDSNCVIICLYVDDMLIFCTNLSVVKEAKAFLSTQFDMKDLGEVDVILRIK 980
            +D CVY +      VI+CLYVDD+LIF TNL V+ E K+FLS  FDMKDLG  DVIL IK
Sbjct: 1057 ADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIK 1116

Query: 981  VNKTVNGFSLSQSHYIEKMLRKFNSFDVVPVRTPYDSSISLKKNKGPSISQTEYAKIIGS 1160
            + +  NG +L QSHY+EK+L +F   D  P  TPYD S+ L+KNK  + +Q EY++IIGS
Sbjct: 1117 LIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGS 1176

Query: 1161 VMFLMNYARPDIAYVVSRLSRYTHNPSNKH*NALHHLLRYLKGTIDWCLHFNKFSAVLEG 1340
            +M+L +  RPDI++ VS+LSR+T NP + H  AL  ++RYLKGT++  LH+  + AVLEG
Sbjct: 1177 LMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEG 1236

Query: 1341 FCDANWFFANSEVSSTCGYVFTLGGGAISWKSAKQTCIAGSTMESEFIALELAGQEAEWL 1520
            + D+NW     E+ +T GYVFTLGGGA+SW+S KQT +  STME+E  AL+ A  EAEWL
Sbjct: 1237 YSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWL 1296

Query: 1521 RNILADIPMWGRSSVPVSLHCDSQTAIGIAKNSVYNGK-RRHIRIRHSAVKQLLKTGVIS 1697
            R++L D+P+  +    + ++CD+QT I    +S  N K  RH++ R  +V++L  +GVI+
Sbjct: 1297 RDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVIT 1356

Query: 1698 LEYMRSERNLAEPLTKELVRKIVFESARGAGLKP 1799
            L+Y+++ RNLA+P TK L R ++  +++  GL+P
Sbjct: 1357 LDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1390



 Score = 32.0 bits (71), Expect(2) = e-155
 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
 Frame = +1

Query: 4    ESRDAEFFELTFPLK-----KNACXXXXXXXXXXXXXXXXLFEPVNE------TRRNKRR 150
            ESRDA FFE  FP+K      N                    E V+E       RR+KR+
Sbjct: 802  ESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQ 861

Query: 151  RIENKFGPDFITSFLAENP 207
            R    FG DF    + + P
Sbjct: 862  RTAKSFGDDFTVYLVDDTP 880


>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  547 bits (1410), Expect(2) = e-155
 Identities = 269/514 (52%), Positives = 373/514 (72%), Gaps = 1/514 (0%)
 Frame = +3

Query: 261  PKNM*RGYKSITPIDASFWKEAIKSKLDSIMTNYTWDLVDLLKGSKPIKCK*IFRRKLKP 440
            PK++   Y S    DA +WKEA++S++DSI+ N TW++ +   G KP+ CK +F++KL+P
Sbjct: 791  PKSISEAYASP---DADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRP 847

Query: 441  DGTIEKFKARLVVVGFTQKKDINFFDTYSPVSKIAIIRTLIALVAIHNLVIQQMDVKTAF 620
            DGTIEK+KARLV  G+TQK+  +FFDTYSPV+++  IR L++L A H L++ QMDVKTAF
Sbjct: 848  DGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 907

Query: 621  LNVDLNEEIYVEQP*GFIVSGQESKVCKLRKSLYGLKQGPKQWYEKFDQILISNGYTVNT 800
            LN +L+EEIY++QP GF+V GQE KVCKL KSLYGLKQ PKQW+EKFD+ L S G+ VN 
Sbjct: 908  LNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNE 967

Query: 801  SDFCVYSKMFDSNCVIICLYVDDMLIFCTNLSVVKEAKAFLSTQFDMKDLGEVDVILRIK 980
            +D CVY +      VI+CLYVDD+LIF TNL V+ E K+FLS  FDMKDLG  DVIL IK
Sbjct: 968  ADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIK 1027

Query: 981  VNKTVNGFSLSQSHYIEKMLRKFNSFDVVPVRTPYDSSISLKKNKGPSISQTEYAKIIGS 1160
            + +  NG +L QSHY+EK+L +F   D  P  TPYD S+ L+KNK  + +Q EY++IIGS
Sbjct: 1028 LIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGS 1087

Query: 1161 VMFLMNYARPDIAYVVSRLSRYTHNPSNKH*NALHHLLRYLKGTIDWCLHFNKFSAVLEG 1340
            +M+L +  RPDI++ VS+LSR+T NP + H  AL  ++RYLKGT++  LH+  + AVLEG
Sbjct: 1088 LMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEG 1147

Query: 1341 FCDANWFFANSEVSSTCGYVFTLGGGAISWKSAKQTCIAGSTMESEFIALELAGQEAEWL 1520
            + D+NW     E+ +T GYVFTLGGGA+SW+S KQT +  STME+E  AL+ A  EAEWL
Sbjct: 1148 YSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWL 1207

Query: 1521 RNILADIPMWGRSSVPVSLHCDSQTAIGIAKNSVYNGK-RRHIRIRHSAVKQLLKTGVIS 1697
            R++L D+P+  +    + ++CD+QT I    +S  N K  RH++ R  +V++L  +GVI+
Sbjct: 1208 RDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVIT 1267

Query: 1698 LEYMRSERNLAEPLTKELVRKIVFESARGAGLKP 1799
            L+Y+++ RNLA+P TK L R ++  +++  GL+P
Sbjct: 1268 LDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1301



 Score = 32.0 bits (71), Expect(2) = e-155
 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
 Frame = +1

Query: 4   ESRDAEFFELTFPLK-----KNACXXXXXXXXXXXXXXXXLFEPVNE------TRRNKRR 150
           ESRDA FFE  FP+K      N                    E V+E       RR+KR+
Sbjct: 713 ESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQ 772

Query: 151 RIENKFGPDFITSFLAENP 207
           R    FG DF    + + P
Sbjct: 773 RTAKSFGDDFTVYLVDDTP 791


>gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1302

 Score =  547 bits (1410), Expect(2) = e-155
 Identities = 269/514 (52%), Positives = 373/514 (72%), Gaps = 1/514 (0%)
 Frame = +3

Query: 261  PKNM*RGYKSITPIDASFWKEAIKSKLDSIMTNYTWDLVDLLKGSKPIKCK*IFRRKLKP 440
            PK++   Y S    DA +WKEA++S++DSI+ N TW++ +   G KP+ CK +F++KL+P
Sbjct: 791  PKSISEAYASP---DADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRP 847

Query: 441  DGTIEKFKARLVVVGFTQKKDINFFDTYSPVSKIAIIRTLIALVAIHNLVIQQMDVKTAF 620
            DGTIEK+KARLV  G+TQK+  +FFDTYSPV+++  IR L++L A H L++ QMDVKTAF
Sbjct: 848  DGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 907

Query: 621  LNVDLNEEIYVEQP*GFIVSGQESKVCKLRKSLYGLKQGPKQWYEKFDQILISNGYTVNT 800
            LN +L+EEIY++QP GF+V GQE KVCKL KSLYGLKQ PKQW+EKFD+ L S G+ VN 
Sbjct: 908  LNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNE 967

Query: 801  SDFCVYSKMFDSNCVIICLYVDDMLIFCTNLSVVKEAKAFLSTQFDMKDLGEVDVILRIK 980
            +D CVY +      VI+CLYVDD+LIF TNL V+ E K+FLS  FDMKDLG  DVIL IK
Sbjct: 968  ADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIK 1027

Query: 981  VNKTVNGFSLSQSHYIEKMLRKFNSFDVVPVRTPYDSSISLKKNKGPSISQTEYAKIIGS 1160
            + +  NG +L QSHY+EK+L +F   D  P  TPYD S+ L+KNK  + +Q EY++IIGS
Sbjct: 1028 LIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGS 1087

Query: 1161 VMFLMNYARPDIAYVVSRLSRYTHNPSNKH*NALHHLLRYLKGTIDWCLHFNKFSAVLEG 1340
            +M+L +  RPDI++ VS+LSR+T NP + H  AL  ++RYLKGT++  LH+  + AVLEG
Sbjct: 1088 LMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEG 1147

Query: 1341 FCDANWFFANSEVSSTCGYVFTLGGGAISWKSAKQTCIAGSTMESEFIALELAGQEAEWL 1520
            + D+NW     E+ +T GYVFTLGGGA+SW+S KQT +  STME+E  AL+ A  EAEWL
Sbjct: 1148 YSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWL 1207

Query: 1521 RNILADIPMWGRSSVPVSLHCDSQTAIGIAKNSVYNGK-RRHIRIRHSAVKQLLKTGVIS 1697
            R++L D+P+  +    + ++CD+QT I    +S  N K  RH++ R  +V++L  +GVI+
Sbjct: 1208 RDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVIT 1267

Query: 1698 LEYMRSERNLAEPLTKELVRKIVFESARGAGLKP 1799
            L+Y+++ RNLA+P TK L R ++  +++  GL+P
Sbjct: 1268 LDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1301



 Score = 32.0 bits (71), Expect(2) = e-155
 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
 Frame = +1

Query: 4   ESRDAEFFELTFPLK-----KNACXXXXXXXXXXXXXXXXLFEPVNE------TRRNKRR 150
           ESRDA FFE  FP+K      N                    E V+E       RR+KR+
Sbjct: 713 ESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQ 772

Query: 151 RIENKFGPDFITSFLAENP 207
           R    FG DF    + + P
Sbjct: 773 RTAKSFGDDFTVYLVDDTP 791


>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1095

 Score =  547 bits (1410), Expect(2) = e-155
 Identities = 269/514 (52%), Positives = 373/514 (72%), Gaps = 1/514 (0%)
 Frame = +3

Query: 261  PKNM*RGYKSITPIDASFWKEAIKSKLDSIMTNYTWDLVDLLKGSKPIKCK*IFRRKLKP 440
            PK++   Y S    DA +WKEA++S++DSI+ N TW++ +   G KP+ CK +F++KL+P
Sbjct: 584  PKSISEAYASP---DADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRP 640

Query: 441  DGTIEKFKARLVVVGFTQKKDINFFDTYSPVSKIAIIRTLIALVAIHNLVIQQMDVKTAF 620
            DGTIEK+KARLV  G+TQK+  +FFDTYSPV+++  IR L++L A H L++ QMDVKTAF
Sbjct: 641  DGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 700

Query: 621  LNVDLNEEIYVEQP*GFIVSGQESKVCKLRKSLYGLKQGPKQWYEKFDQILISNGYTVNT 800
            LN +L+EEIY++QP GF+V GQE KVCKL KSLYGLKQ PKQW+EKFD+ L S G+ VN 
Sbjct: 701  LNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNE 760

Query: 801  SDFCVYSKMFDSNCVIICLYVDDMLIFCTNLSVVKEAKAFLSTQFDMKDLGEVDVILRIK 980
            +D CVY +      VI+CLYVDD+LIF TNL V+ E K+FLS  FDMKDLG  DVIL IK
Sbjct: 761  ADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIK 820

Query: 981  VNKTVNGFSLSQSHYIEKMLRKFNSFDVVPVRTPYDSSISLKKNKGPSISQTEYAKIIGS 1160
            + +  NG +L QSHY+EK+L +F   D  P  TPYD S+ L+KNK  + +Q EY++IIGS
Sbjct: 821  LIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGS 880

Query: 1161 VMFLMNYARPDIAYVVSRLSRYTHNPSNKH*NALHHLLRYLKGTIDWCLHFNKFSAVLEG 1340
            +M+L +  RPDI++ VS+LSR+T NP + H  AL  ++RYLKGT++  LH+  + AVLEG
Sbjct: 881  LMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEG 940

Query: 1341 FCDANWFFANSEVSSTCGYVFTLGGGAISWKSAKQTCIAGSTMESEFIALELAGQEAEWL 1520
            + D+NW     E+ +T GYVFTLGGGA+SW+S KQT +  STME+E  AL+ A  EAEWL
Sbjct: 941  YSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWL 1000

Query: 1521 RNILADIPMWGRSSVPVSLHCDSQTAIGIAKNSVYNGK-RRHIRIRHSAVKQLLKTGVIS 1697
            R++L D+P+  +    + ++CD+QT I    +S  N K  RH++ R  +V++L  +GVI+
Sbjct: 1001 RDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVIT 1060

Query: 1698 LEYMRSERNLAEPLTKELVRKIVFESARGAGLKP 1799
            L+Y+++ RNLA+P TK L R ++  +++  GL+P
Sbjct: 1061 LDYIQTARNLADPFTKGLSRNVINNASKEMGLRP 1094



 Score = 32.0 bits (71), Expect(2) = e-155
 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
 Frame = +1

Query: 4   ESRDAEFFELTFPLK-----KNACXXXXXXXXXXXXXXXXLFEPVNE------TRRNKRR 150
           ESRDA FFE  FP+K      N                    E V+E       RR+KR+
Sbjct: 506 ESRDATFFESFFPMKDTHSGSNQPFEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQ 565

Query: 151 RIENKFGPDFITSFLAENP 207
           R    FG DF    + + P
Sbjct: 566 RTAKSFGDDFTVYLVDDTP 584


>emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]
          Length = 1314

 Score =  546 bits (1408), Expect(2) = e-155
 Identities = 269/514 (52%), Positives = 373/514 (72%), Gaps = 1/514 (0%)
 Frame = +3

Query: 261  PKNM*RGYKSITPIDASFWKEAIKSKLDSIMTNYTWDLVDLLKGSKPIKCK*IFRRKLKP 440
            PK++   Y S    DA +WKEA++S++DSI+ N TW++ +   G KP+ CK +F++KL+P
Sbjct: 763  PKSISEAYASP---DADYWKEAVRSEMDSIIANGTWEVTEQPYGCKPVGCKWVFKKKLRP 819

Query: 441  DGTIEKFKARLVVVGFTQKKDINFFDTYSPVSKIAIIRTLIALVAIHNLVIQQMDVKTAF 620
            DGTIEK+KARLV  G+TQK+  +FFDTYSPV+++  IR L++L A H L++ QMDVKTAF
Sbjct: 820  DGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 879

Query: 621  LNVDLNEEIYVEQP*GFIVSGQESKVCKLRKSLYGLKQGPKQWYEKFDQILISNGYTVNT 800
            LN +L+EEIY++QP GF+V GQE KVCKL KSLYGLKQ PKQW+EKFD+ L S G+ VN 
Sbjct: 880  LNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFGVNE 939

Query: 801  SDFCVYSKMFDSNCVIICLYVDDMLIFCTNLSVVKEAKAFLSTQFDMKDLGEVDVILRIK 980
            +D CVY +      VI+CLYVDD+LIF TNL V+ E K+FLS  FDMKDLG  DVIL IK
Sbjct: 940  ADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIK 999

Query: 981  VNKTVNGFSLSQSHYIEKMLRKFNSFDVVPVRTPYDSSISLKKNKGPSISQTEYAKIIGS 1160
            + +  NG +L QSHY+EK+L +F   D  P  TPYD S+ L+KNK  + +Q EY++IIGS
Sbjct: 1000 LIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGS 1059

Query: 1161 VMFLMNYARPDIAYVVSRLSRYTHNPSNKH*NALHHLLRYLKGTIDWCLHFNKFSAVLEG 1340
            +M+L +  RPDI++ VS+LSR+T NP + H  AL  ++RYLKGT++  LH+  + AVLEG
Sbjct: 1060 LMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEG 1119

Query: 1341 FCDANWFFANSEVSSTCGYVFTLGGGAISWKSAKQTCIAGSTMESEFIALELAGQEAEWL 1520
            + D+NW     E+ +T GYVFTLGGGA+SW+S KQT +  STME+E  AL+ A  EAEWL
Sbjct: 1120 YSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWL 1179

Query: 1521 RNILADIPMWGRSSVPVSLHCDSQTAIGIAKNSVYNGK-RRHIRIRHSAVKQLLKTGVIS 1697
            R++L D+P+  +    + ++CD+QT I    +S  N K  RH++ R  +V++L  +GVI+
Sbjct: 1180 RDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVIT 1239

Query: 1698 LEYMRSERNLAEPLTKELVRKIVFESARGAGLKP 1799
            L+Y+++ RNLA+P TK L R ++  +++  GL+P
Sbjct: 1240 LDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1273



 Score = 32.0 bits (71), Expect(2) = e-155
 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
 Frame = +1

Query: 4   ESRDAEFFELTFPLK-----KNACXXXXXXXXXXXXXXXXLFEPVNE------TRRNKRR 150
           ESRDA FFE  FP+K      N                    E V+E       RR+KR+
Sbjct: 685 ESRDATFFESFFPMKDTHSGSNQPSEIIPSSIIPPEQTEHTHELVSEEDVSEAPRRSKRQ 744

Query: 151 RIENKFGPDFITSFLAENP 207
           R    FG DF    + + P
Sbjct: 745 RTAKSFGDDFTVYLVDDTP 763


>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
          Length = 1302

 Score =  546 bits (1407), Expect(2) = e-155
 Identities = 270/514 (52%), Positives = 372/514 (72%), Gaps = 1/514 (0%)
 Frame = +3

Query: 261  PKNM*RGYKSITPIDASFWKEAIKSKLDSIMTNYTWDLVDLLKGSKPIKCK*IFRRKLKP 440
            PK++   Y S    DA +WKEAI S++DSI+ N TW++ +   G KP+ CK +F++KL+P
Sbjct: 791  PKSISEAYASP---DADYWKEAICSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRP 847

Query: 441  DGTIEKFKARLVVVGFTQKKDINFFDTYSPVSKIAIIRTLIALVAIHNLVIQQMDVKTAF 620
            DGTIEK+KARLV  G+TQK+  +FFDTYSPV+++  IR L++L A H L++ QMDVKTAF
Sbjct: 848  DGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 907

Query: 621  LNVDLNEEIYVEQP*GFIVSGQESKVCKLRKSLYGLKQGPKQWYEKFDQILISNGYTVNT 800
            LN +L+EEIY++QP GF+V GQE KVCKL KSLYGLKQ PKQW+EKFD+ LIS G+ VN 
Sbjct: 908  LNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLISAGFAVNE 967

Query: 801  SDFCVYSKMFDSNCVIICLYVDDMLIFCTNLSVVKEAKAFLSTQFDMKDLGEVDVILRIK 980
            +D CVY +      VI+CLYVDD+LIF TNL V+ E K+FLS  FDMKDLG  DVIL IK
Sbjct: 968  ADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIK 1027

Query: 981  VNKTVNGFSLSQSHYIEKMLRKFNSFDVVPVRTPYDSSISLKKNKGPSISQTEYAKIIGS 1160
            + +  NG +L QSHY+EK+L +F   D  P  TPYD S+ L+KNK  + +Q EY++IIGS
Sbjct: 1028 LIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGS 1087

Query: 1161 VMFLMNYARPDIAYVVSRLSRYTHNPSNKH*NALHHLLRYLKGTIDWCLHFNKFSAVLEG 1340
            +M+L +  RPDI++ VS+LSR+T NP + H  AL  ++RYLKGT++   H+  + AVLEG
Sbjct: 1088 LMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGFHYTGYPAVLEG 1147

Query: 1341 FCDANWFFANSEVSSTCGYVFTLGGGAISWKSAKQTCIAGSTMESEFIALELAGQEAEWL 1520
            + D+NW     E+ +T GYVFTLGGGA+SW+S KQT +  STME+E  AL+ A  EAEWL
Sbjct: 1148 YSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWL 1207

Query: 1521 RNILADIPMWGRSSVPVSLHCDSQTAIGIAKNSVYNGK-RRHIRIRHSAVKQLLKTGVIS 1697
            R++L D+P+  +    + ++CD+QT I    +S  N K  RH++ R  +V++L  +GVI+
Sbjct: 1208 RDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVIT 1267

Query: 1698 LEYMRSERNLAEPLTKELVRKIVFESARGAGLKP 1799
            L+Y+++ RNLA+P TK L R ++  +++  GL+P
Sbjct: 1268 LDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1301



 Score = 32.0 bits (71), Expect(2) = e-155
 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
 Frame = +1

Query: 4   ESRDAEFFELTFPLK-----KNACXXXXXXXXXXXXXXXXLFEPVNE------TRRNKRR 150
           ESRDA FFE  FP+K      N                    E V+E       RR+KR+
Sbjct: 713 ESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPSEQTEHTHELVSEEDVSEAPRRSKRQ 772

Query: 151 RIENKFGPDFITSFLAENP 207
           R    FG DF    + + P
Sbjct: 773 RTAKSFGDDFTVYLVDDTP 791


>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  546 bits (1406), Expect(2) = e-155
 Identities = 268/514 (52%), Positives = 372/514 (72%), Gaps = 1/514 (0%)
 Frame = +3

Query: 261  PKNM*RGYKSITPIDASFWKEAIKSKLDSIMTNYTWDLVDLLKGSKPIKCK*IFRRKLKP 440
            PK++   Y S    DA +WKEA++S++DSI+ N TW++ +   G KP+ CK +F++KL+P
Sbjct: 791  PKSISEAYASP---DADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRP 847

Query: 441  DGTIEKFKARLVVVGFTQKKDINFFDTYSPVSKIAIIRTLIALVAIHNLVIQQMDVKTAF 620
            DGTIEK+KARLV  G+TQK+  +FFDTYSPV+++  IR L++L A H L++ QMDVKTAF
Sbjct: 848  DGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 907

Query: 621  LNVDLNEEIYVEQP*GFIVSGQESKVCKLRKSLYGLKQGPKQWYEKFDQILISNGYTVNT 800
            LN +L+EEIY++QP GF+V GQE KVCKL KSLYGLKQ PKQW+EKFD+ L S G+ VN 
Sbjct: 908  LNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNE 967

Query: 801  SDFCVYSKMFDSNCVIICLYVDDMLIFCTNLSVVKEAKAFLSTQFDMKDLGEVDVILRIK 980
            +D CVY +      VI+CLYVDD+LIF TNL V+ E K+FLS  FDMKDLG  DVIL IK
Sbjct: 968  ADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIK 1027

Query: 981  VNKTVNGFSLSQSHYIEKMLRKFNSFDVVPVRTPYDSSISLKKNKGPSISQTEYAKIIGS 1160
            + +  NG +L QSHY+EK+L +F   D  P  TPYD S+ L+KNK  + +Q EY++IIGS
Sbjct: 1028 LIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGS 1087

Query: 1161 VMFLMNYARPDIAYVVSRLSRYTHNPSNKH*NALHHLLRYLKGTIDWCLHFNKFSAVLEG 1340
            +M+L +  RPDI++ VS+LSR+T NP + H   L  ++RYLKGT++  LH+  + AVLEG
Sbjct: 1088 LMYLASATRPDISFAVSKLSRFTSNPGDDHWRVLERVMRYLKGTVELGLHYTGYPAVLEG 1147

Query: 1341 FCDANWFFANSEVSSTCGYVFTLGGGAISWKSAKQTCIAGSTMESEFIALELAGQEAEWL 1520
            + D+NW     E+ +T GYVFTLGGGA+SW+S KQT +  STME+E  AL+ A  EAEWL
Sbjct: 1148 YSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWL 1207

Query: 1521 RNILADIPMWGRSSVPVSLHCDSQTAIGIAKNSVYNGK-RRHIRIRHSAVKQLLKTGVIS 1697
            R++L D+P+  +    + ++CD+QT I    +S  N K  RH++ R  +V++L  +GVI+
Sbjct: 1208 RDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVIT 1267

Query: 1698 LEYMRSERNLAEPLTKELVRKIVFESARGAGLKP 1799
            L+Y+++ RNLA+P TK L R ++  +++  GL+P
Sbjct: 1268 LDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1301



 Score = 32.0 bits (71), Expect(2) = e-155
 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
 Frame = +1

Query: 4   ESRDAEFFELTFPLK-----KNACXXXXXXXXXXXXXXXXLFEPVNE------TRRNKRR 150
           ESRDA FFE  FP+K      N                    E V+E       RR+KR+
Sbjct: 713 ESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQ 772

Query: 151 RIENKFGPDFITSFLAENP 207
           R    FG DF    + + P
Sbjct: 773 RTAKSFGDDFTVYLVDDTP 791


>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
          Length = 1473

 Score =  554 bits (1428), Expect = e-155
 Identities = 270/489 (55%), Positives = 353/489 (72%)
 Frame = +3

Query: 303  DASFWKEAIKSKLDSIMTNYTWDLVDLLKGSKPIKCK*IFRRKLKPDGTIEKFKARLVVV 482
            D +FWKEAI  ++DSIM+N TW+LVDL  GSKPI CK +FRRK   DG I+ FKARLV  
Sbjct: 812  DVAFWKEAINDEMDSIMSNQTWELVDLPPGSKPIGCKWVFRRKYHTDGMIQTFKARLVAK 871

Query: 483  GFTQKKDINFFDTYSPVSKIAIIRTLIALVAIHNLVIQQMDVKTAFLNVDLNEEIYVEQP 662
            GF Q++ I++FDTY+PV++   IR L AL +IHNL + QMDVKTAFLN DLNEE+Y+EQP
Sbjct: 872  GFKQREGIDYFDTYAPVARTTSIRILFALASIHNLFVHQMDVKTAFLNGDLNEEVYMEQP 931

Query: 663  *GFIVSGQESKVCKLRKSLYGLKQGPKQWYEKFDQILISNGYTVNTSDFCVYSKMFDSNC 842
             GF++ G E+KVCKL KSLYGLKQ PKQW+EKFD  ++S+G+  N  D C+YSK  D   
Sbjct: 932  EGFVLLGNENKVCKLVKSLYGLKQAPKQWHEKFDHAILSDGFRHNNVDKCLYSKTCDDYM 991

Query: 843  VIICLYVDDMLIFCTNLSVVKEAKAFLSTQFDMKDLGEVDVILRIKVNKTVNGFSLSQSH 1022
            VI+CLYVDDMLI   ++  + E K FLS  F MKDL EVD IL IKV +   G++L+Q+H
Sbjct: 992  VIVCLYVDDMLILSDDMXGIIETKRFLSXTFKMKDLXEVDTILGIKVKRNSGGYALNQTH 1051

Query: 1023 YIEKMLRKFNSFDVVPVRTPYDSSISLKKNKGPSISQTEYAKIIGSVMFLMNYARPDIAY 1202
            YIEK++ KF+   +    TP+DSSI L+KN G S++Q EYA  IGS+M+     R DI++
Sbjct: 1052 YIEKVVSKFSHLKIKDANTPFDSSIKLEKNBGRSVAQLEYASAIGSLMYAAQCTRADISF 1111

Query: 1203 VVSRLSRYTHNPSNKH*NALHHLLRYLKGTIDWCLHFNKFSAVLEGFCDANWFFANSEVS 1382
             VS+LSR+T NPS +H  A+  +L YLK T +  L ++KF A++EG+ DA+W  +  +  
Sbjct: 1112 AVSKLSRFTSNPSVEHWKAIGRVLGYLKNTKELSLQYSKFPAIIEGYSDASWISSVGDNL 1171

Query: 1383 STCGYVFTLGGGAISWKSAKQTCIAGSTMESEFIALELAGQEAEWLRNILADIPMWGRSS 1562
            ST G+VFTLGGGA+SW S KQTCI+ STME+EFIAL   G+EAEWLR+++ DIP    + 
Sbjct: 1172 STTGWVFTLGGGAVSWGSKKQTCISHSTMEAEFIALAATGKEAEWLRDLMMDIPFTANNV 1231

Query: 1563 VPVSLHCDSQTAIGIAKNSVYNGKRRHIRIRHSAVKQLLKTGVISLEYMRSERNLAEPLT 1742
              VS+HCDSQ  +  A + VYNGK RHI IRH  V+QL++ G+IS+ ++RS  NLA+P T
Sbjct: 1232 STVSIHCDSQATLARAYSGVYNGKSRHISIRHEYVRQLIQNGIISISFVRSSGNLADPFT 1291

Query: 1743 KELVRKIVF 1769
            K L R + F
Sbjct: 1292 KPLTRDLNF 1300


>gb|AAT58846.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1229

 Score =  545 bits (1403), Expect(2) = e-155
 Identities = 268/514 (52%), Positives = 371/514 (72%), Gaps = 1/514 (0%)
 Frame = +3

Query: 261  PKNM*RGYKSITPIDASFWKEAIKSKLDSIMTNYTWDLVDLLKGSKPIKCK*IFRRKLKP 440
            PK++   Y S    DA +WKEA++S++DSI+ N TW++ +   G KP+ CK +F++KL+P
Sbjct: 718  PKSISEAYASP---DADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRP 774

Query: 441  DGTIEKFKARLVVVGFTQKKDINFFDTYSPVSKIAIIRTLIALVAIHNLVIQQMDVKTAF 620
            DGTIEK+KARLV  G+TQK+  +FFDTYSPV+++  I  L++L A H LV+ QMDVKTAF
Sbjct: 775  DGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIHVLLSLAASHGLVVHQMDVKTAF 834

Query: 621  LNVDLNEEIYVEQP*GFIVSGQESKVCKLRKSLYGLKQGPKQWYEKFDQILISNGYTVNT 800
            LN +L+EEIY++QP GF+V GQE KVCKL KSLYGLKQ PKQW+EKFD+ L S G+ VN 
Sbjct: 835  LNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNE 894

Query: 801  SDFCVYSKMFDSNCVIICLYVDDMLIFCTNLSVVKEAKAFLSTQFDMKDLGEVDVILRIK 980
            +D CVY +      VI+CLYVDD+LIF TNL V+ E K+FL   FDMKDLG  DVIL IK
Sbjct: 895  ADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLPQNFDMKDLGVADVILNIK 954

Query: 981  VNKTVNGFSLSQSHYIEKMLRKFNSFDVVPVRTPYDSSISLKKNKGPSISQTEYAKIIGS 1160
            + +  NG +L QSHY+EK+L +F   D  P  TPYD S+ L+KNK  + +Q EY++IIGS
Sbjct: 955  LIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGS 1014

Query: 1161 VMFLMNYARPDIAYVVSRLSRYTHNPSNKH*NALHHLLRYLKGTIDWCLHFNKFSAVLEG 1340
            +M+L +  RPDI++ VS+LSR+T NP + H  AL  ++RYLKGT++  LH+  + AVLEG
Sbjct: 1015 LMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEG 1074

Query: 1341 FCDANWFFANSEVSSTCGYVFTLGGGAISWKSAKQTCIAGSTMESEFIALELAGQEAEWL 1520
            + D+NW     E+ +T GYVFTLGGGA+SW+S KQT +  STME+E  AL+ A  EAEWL
Sbjct: 1075 YSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWL 1134

Query: 1521 RNILADIPMWGRSSVPVSLHCDSQTAIGIAKNSVYNGK-RRHIRIRHSAVKQLLKTGVIS 1697
            R++L D+P+  +    + ++CD+QT I    +S  N K  RH++ R  +V++L  +GVI+
Sbjct: 1135 RDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVIT 1194

Query: 1698 LEYMRSERNLAEPLTKELVRKIVFESARGAGLKP 1799
            L+Y+++ RNLA+P TK L R ++  +++  GL+P
Sbjct: 1195 LDYIQTARNLADPFTKGLSRNVIDNASKEMGLRP 1228



 Score = 32.0 bits (71), Expect(2) = e-155
 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
 Frame = +1

Query: 4   ESRDAEFFELTFPLK-----KNACXXXXXXXXXXXXXXXXLFEPVNE------TRRNKRR 150
           ESRDA FFE  FP+K      N                    E V+E       RR+KR+
Sbjct: 640 ESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQ 699

Query: 151 RIENKFGPDFITSFLAENP 207
           R    FG DF    + + P
Sbjct: 700 RTAKSFGDDFTVYLVDDTP 718


>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
          Length = 1264

 Score =  540 bits (1392), Expect(2) = e-154
 Identities = 260/501 (51%), Positives = 365/501 (72%), Gaps = 1/501 (0%)
 Frame = +3

Query: 303  DASFWKEAIKSKLDSIMTNYTWDLVDLLKGSKPIKCK*IFRRKLKPDGTIEKFKARLVVV 482
            DA  WKEA+ +++DSI++N TW++ D   G KP+ CK +F++KLKPDGTIEK+KARLV  
Sbjct: 764  DADDWKEAVHNEMDSILSNGTWEITDRPYGCKPVGCKWVFKKKLKPDGTIEKYKARLVAK 823

Query: 483  GFTQKKDINFFDTYSPVSKIAIIRTLIALVAIHNLVIQQMDVKTAFLNVDLNEEIYVEQP 662
            G+TQK+  +FFDTYSPV+++  IR L++L A + L++ QMDVKTAFLN +L+EEIY+EQP
Sbjct: 824  GYTQKEGEDFFDTYSPVARMTTIRVLLSLAASYGLLVHQMDVKTAFLNGELDEEIYMEQP 883

Query: 663  *GFIVSGQESKVCKLRKSLYGLKQGPKQWYEKFDQILISNGYTVNTSDFCVYSKMFDSNC 842
             GF+V GQESKVCKL KSLYGLKQ PKQW+EKFD  L S G+ +N +D CVY +      
Sbjct: 884  DGFVVKGQESKVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFAINEADRCVYYRCGGGEG 943

Query: 843  VIICLYVDDMLIFCTNLSVVKEAKAFLSTQFDMKDLGEVDVILRIKVNKTVNGFSLSQSH 1022
            VI+CLYVDD+LIF TN+ V+ E K+FLS  FDMKDLGE DVIL IK+ K   G +LSQSH
Sbjct: 944  VILCLYVDDILIFGTNIDVINEVKSFLSKSFDMKDLGEADVILNIKLIKADGGITLSQSH 1003

Query: 1023 YIEKMLRKFNSFDVVPVRTPYDSSISLKKNKGPSISQTEYAKIIGSVMFLMNYARPDIAY 1202
            Y+EK+L++F   +  P  TPYD S++L+KNK   + Q  Y++I+GS+M+L    RPDI++
Sbjct: 1004 YVEKVLKRFGFSECKPSPTPYDPSVTLRKNKRIGLDQLRYSQIVGSLMYLAGATRPDISF 1063

Query: 1203 VVSRLSRYTHNPSNKH*NALHHLLRYLKGTIDWCLHFNKFSAVLEGFCDANWFFANSEVS 1382
             VS+LSR+  NP   H +AL  ++RYL+GT+ + +H++   AVLEG+ D+NW     E+ 
Sbjct: 1064 AVSKLSRFMSNPGTDHWHALERVMRYLQGTMSYGIHYSGQHAVLEGYSDSNWISDADELY 1123

Query: 1383 STCGYVFTLGGGAISWKSAKQTCIAGSTMESEFIALELAGQEAEWLRNILADIPMWGRSS 1562
            +T GYVFT+GGGA+SW+S KQT +  STME+E  AL+ A  EAEWLR +L D+P+  +  
Sbjct: 1124 ATSGYVFTIGGGAVSWRSCKQTILTRSTMEAELAALDTATVEAEWLRELLMDLPVVEKPI 1183

Query: 1563 VPVSLHCDSQTAIGIAKNSVYNGK-RRHIRIRHSAVKQLLKTGVISLEYMRSERNLAEPL 1739
              + ++CD+QT I    +S  NGK  RH++ R  +V++L  +GVIS+ Y+ +++NLA+P 
Sbjct: 1184 PAILMNCDNQTVIAKVTSSKDNGKSSRHVKRRLKSVRKLRNSGVISVTYISTDKNLADPF 1243

Query: 1740 TKELVRKIVFESARGAGLKPQ 1802
            TK L R ++  ++R  G++P+
Sbjct: 1244 TKGLPRNVIEIASREMGMRPE 1264



 Score = 35.8 bits (81), Expect(2) = e-154
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 11/79 (13%)
 Frame = +1

Query: 4   ESRDAEFFELTFPLKK-NACXXXXXXXXXXXXXXXXLFEPVNET----------RRNKRR 150
           ESRDA FFE  FP+K  ++                  FE  +E           +R+KR+
Sbjct: 675 ESRDATFFEHIFPMKDIHSNSRYSSEIIPEHNTPIESFEQPHEIVLEEDDNDAPKRSKRQ 734

Query: 151 RIENKFGPDFITSFLAENP 207
           R+E  FG DFI   + + P
Sbjct: 735 RVEKSFGDDFIVYLVDDTP 753