BLASTX nr result
ID: Rauwolfia21_contig00024298
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00024298
(725 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI38165.3| unnamed protein product [Vitis vinifera] 347 3e-93
ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi... 347 3e-93
gb|EMJ05295.1| hypothetical protein PRUPE_ppa002338mg [Prunus pe... 343 4e-92
ref|XP_004237174.1| PREDICTED: pentatricopeptide repeat-containi... 334 2e-89
ref|XP_006359274.1| PREDICTED: pentatricopeptide repeat-containi... 333 3e-89
ref|XP_002517667.1| pentatricopeptide repeat-containing protein,... 327 2e-87
gb|EOY00090.1| Pentatricopeptide repeat (PPR) superfamily protei... 326 4e-87
ref|XP_004502949.1| PREDICTED: pentatricopeptide repeat-containi... 323 3e-86
ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi... 323 3e-86
gb|EXC23679.1| hypothetical protein L484_015589 [Morus notabilis] 320 3e-85
gb|ESW09789.1| hypothetical protein PHAVU_009G156000g [Phaseolus... 314 2e-83
ref|XP_006432168.1| hypothetical protein CICLE_v10000448mg [Citr... 314 2e-83
ref|XP_006297108.1| hypothetical protein CARUB_v10013108mg [Caps... 311 2e-82
ref|XP_006297107.1| hypothetical protein CARUB_v10013108mg [Caps... 311 2e-82
ref|XP_002883803.1| pentatricopeptide repeat-containing protein ... 310 2e-82
ref|XP_003602631.1| Pentatricopeptide repeat-containing protein ... 310 3e-82
ref|NP_178983.1| pentatricopeptide repeat-containing protein [Ar... 307 2e-81
ref|XP_006409682.1| hypothetical protein EUTSA_v10022582mg [Eutr... 305 1e-80
ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containi... 305 1e-80
ref|XP_002310520.1| pentatricopeptide repeat-containing family p... 300 3e-79
>emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 347 bits (889), Expect = 3e-93
Identities = 162/241 (67%), Positives = 201/241 (83%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
ID YGKC CLD+AR++F +MP +NTFTWNS+IS L+ SG LDEA F MPEPDQC+WN
Sbjct: 57 IDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWN 116
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
MVSGFAQ + ++SLEY VKMHREDF+ N Y++GSALSAC+GL D MGTQ+HA VSKS
Sbjct: 117 SMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKS 176
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
R+ +DVY+GSAL+DMYSKCG V A++ F G+ ERN+V+WN+LITCYEQNGPASEAL VF
Sbjct: 177 RYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVF 236
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
+MM++G +PDE +LASVVSACA+L A+KEG +IHA+V+K + FRDD+V+ N LVDMYAK
Sbjct: 237 VRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAK 296
Query: 721 C 723
C
Sbjct: 297 C 297
Score = 125 bits (315), Expect = 1e-26
Identities = 66/212 (31%), Positives = 109/212 (51%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y KC ++ AR VF +M +N + SM+S + + + A FS M + + +WN
Sbjct: 291 VDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWN 350
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
+++G+ Q +++L + RE YT+G+ L
Sbjct: 351 ALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLK--------------------- 389
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
SD+++G++L+DMY KCG + + F+ + ER+ VSWN +I Y QNG +EAL +F
Sbjct: 390 ---SDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIF 446
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGR 636
KM+ G PD ++ V+ AC+ V+EGR
Sbjct: 447 RKMLVCGEKPDHVTMIGVLCACSHAGLVEEGR 478
Score = 102 bits (255), Expect = 1e-19
Identities = 74/250 (29%), Positives = 112/250 (44%), Gaps = 32/250 (12%)
Frame = +1
Query: 70 NTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWNLMVSGFAQAEFLDKSLEYLVKMH 249
+ + +++I S G + AE+ FS M E + TWN +++ + Q ++LE V+M
Sbjct: 181 DVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMM 240
Query: 250 REDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS-RFLSDVYIGSALVDMYSKCGDV 426
+ T S +SAC+ L K G QIHA V K+ +F D+ +G+ALVDMY+KC V
Sbjct: 241 DSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKV 300
Query: 427 VGAQKAFD-------------------------------GITERNVVSWNTLITCYEQNG 513
A++ FD +T+RNVVSWN LI Y QNG
Sbjct: 301 NEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNG 360
Query: 514 PASEALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVIC 693
EAL +F + P + +++ + DI +
Sbjct: 361 ENEEALRLFRLLKRESIWPTHYTFGNLL-------------------------KSDIFVG 395
Query: 694 NTLVDMYAKC 723
N+L+DMY KC
Sbjct: 396 NSLIDMYMKC 405
Score = 80.5 bits (197), Expect = 5e-13
Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 31/189 (16%)
Frame = +1
Query: 250 REDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKSRFLSDVYIGSALVDMYSKCGDVV 429
R+ ++ N+ + L +C + + +HA + ++F +++I + L+D+Y KC +
Sbjct: 8 RDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLD 67
Query: 430 GAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVFSKM----------MNNG---HDP 570
A+K FD + +RN +WN+LI+ ++G EA +F M M +G HD
Sbjct: 68 DARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDR 127
Query: 571 DERSL------------------ASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICN 696
E SL S +SACA L + G ++HA V K + D+ + +
Sbjct: 128 FEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSK-SRYSTDVYMGS 186
Query: 697 TLVDMYAKC 723
L+DMY+KC
Sbjct: 187 ALIDMYSKC 195
>ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 347 bits (889), Expect = 3e-93
Identities = 162/241 (67%), Positives = 201/241 (83%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
ID YGKC CLD+AR++F +MP +NTFTWNS+IS L+ SG LDEA F MPEPDQC+WN
Sbjct: 57 IDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWN 116
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
MVSGFAQ + ++SLEY VKMHREDF+ N Y++GSALSAC+GL D MGTQ+HA VSKS
Sbjct: 117 SMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKS 176
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
R+ +DVY+GSAL+DMYSKCG V A++ F G+ ERN+V+WN+LITCYEQNGPASEAL VF
Sbjct: 177 RYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVF 236
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
+MM++G +PDE +LASVVSACA+L A+KEG +IHA+V+K + FRDD+V+ N LVDMYAK
Sbjct: 237 VRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAK 296
Query: 721 C 723
C
Sbjct: 297 C 297
Score = 151 bits (382), Expect = 2e-34
Identities = 77/218 (35%), Positives = 122/218 (55%), Gaps = 6/218 (2%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y KC ++ AR VF +M +N + SM+S + + + A FS M + + +WN
Sbjct: 291 VDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWN 350
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
+++G+ Q +++L + RE YT+G+ LSAC+ L D +G Q H V K
Sbjct: 351 ALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQ 410
Query: 361 RFL------SDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPAS 522
F SD+++G++L+DMY KCG + + F+ + ER+ VSWN +I Y QNG +
Sbjct: 411 GFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGA 470
Query: 523 EALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGR 636
EAL +F KM+ G PD ++ V+ AC+ V+EGR
Sbjct: 471 EALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGR 508
Score = 126 bits (317), Expect = 6e-27
Identities = 85/255 (33%), Positives = 127/255 (49%), Gaps = 37/255 (14%)
Frame = +1
Query: 70 NTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWNLMVSGFAQAEFLDKSLEYLVKMH 249
+ + +++I S G + AE+ FS M E + TWN +++ + Q ++LE V+M
Sbjct: 181 DVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMM 240
Query: 250 REDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS-RFLSDVYIGSALVDMYSKCGDV 426
+ T S +SAC+ L K G QIHA V K+ +F D+ +G+ALVDMY+KC V
Sbjct: 241 DSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKV 300
Query: 427 VGAQKAFDGI-------------------------------TERNVVSWNTLITCYEQNG 513
A++ FD + T+RNVVSWN LI Y QNG
Sbjct: 301 NEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNG 360
Query: 514 PASEALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIK--FDC---FRD 678
EAL +F + P + +++SACA L+ + GR+ H V+K F+
Sbjct: 361 ENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAES 420
Query: 679 DIVICNTLVDMYAKC 723
DI + N+L+DMY KC
Sbjct: 421 DIFVGNSLIDMYMKC 435
Score = 80.5 bits (197), Expect = 5e-13
Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 31/189 (16%)
Frame = +1
Query: 250 REDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKSRFLSDVYIGSALVDMYSKCGDVV 429
R+ ++ N+ + L +C + + +HA + ++F +++I + L+D+Y KC +
Sbjct: 8 RDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLD 67
Query: 430 GAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVFSKM----------MNNG---HDP 570
A+K FD + +RN +WN+LI+ ++G EA +F M M +G HD
Sbjct: 68 DARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDR 127
Query: 571 DERSL------------------ASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICN 696
E SL S +SACA L + G ++HA V K + D+ + +
Sbjct: 128 FEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSK-SRYSTDVYMGS 186
Query: 697 TLVDMYAKC 723
L+DMY+KC
Sbjct: 187 ALIDMYSKC 195
>gb|EMJ05295.1| hypothetical protein PRUPE_ppa002338mg [Prunus persica]
Length = 685
Score = 343 bits (879), Expect = 4e-92
Identities = 160/241 (66%), Positives = 200/241 (82%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
IDAYGKCGCLD+AR++F KMP +NTFTWNS+IS L+ G +D+A F LMPEPDQC+WN
Sbjct: 41 IDAYGKCGCLDDARKLFDKMPQRNTFTWNSIISTLTKLGFIDDAVQIFRLMPEPDQCSWN 100
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
MVSGFAQ + +++LEY VK+H EDF+ N Y++GSALSAC+GL+ KMG QIHA ++KS
Sbjct: 101 SMVSGFAQHDRFEEALEYFVKLHVEDFVLNEYSFGSALSACAGLRKLKMGVQIHAFIAKS 160
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
+ SDVY+GSAL+DMYSKCG V AQ+ FD +++RN VSWN+LITCYEQNGPASEAL VF
Sbjct: 161 CYSSDVYMGSALIDMYSKCGSVASAQRVFDWMSDRNTVSWNSLITCYEQNGPASEALEVF 220
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
+MM+ G PDE +LASVVSACA+LSA+KEG++I+A VIK D +RDD+V+ N LVDMYAK
Sbjct: 221 VRMMDGGFKPDELTLASVVSACASLSAIKEGQQIYAHVIKCDKYRDDLVLGNALVDMYAK 280
Query: 721 C 723
C
Sbjct: 281 C 281
Score = 150 bits (378), Expect = 5e-34
Identities = 75/219 (34%), Positives = 123/219 (56%), Gaps = 6/219 (2%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y KC L AR +F MP +N + SM+S + + + A F+ M E + +WN
Sbjct: 275 VDMYAKCNRLKQARWIFDGMPVRNVVSETSMVSGYAKAASVKAARLMFAKMMERNIVSWN 334
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
++SG+ Q ++++ + + RE + YT+G+ L+AC+ L D ++G Q H + K
Sbjct: 335 ALISGYTQNGENEEAVGLFLLLKRESVLPTHYTFGNLLNACASLVDLQLGRQAHVHLLKH 394
Query: 361 RFL------SDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPAS 522
F D+++G++L+DMY KCG + + F + ER+ VSWN +I Y QNG +
Sbjct: 395 GFKFQVGEEPDIFVGNSLIDMYMKCGSIEDGCRVFKSMLERDYVSWNAMIVGYAQNGYGT 454
Query: 523 EALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGRE 639
EAL +F KM+ +G PD ++ V+ AC+ V EG+E
Sbjct: 455 EALEIFRKMLASGEQPDHVTMIGVLCACSHAGLVDEGKE 493
Score = 119 bits (297), Expect = 1e-24
Identities = 83/278 (29%), Positives = 128/278 (46%), Gaps = 37/278 (13%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
ID Y KCG + +A+ VF M D+NT + WN
Sbjct: 173 IDMYSKCGSVASAQRVFDWMSDRNTVS-------------------------------WN 201
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSK- 357
+++ + Q ++LE V+M F + T S +SAC+ L K G QI+A V K
Sbjct: 202 SLITCYEQNGPASEALEVFVRMMDGGFKPDELTLASVVSACASLSAIKEGQQIYAHVIKC 261
Query: 358 SRFLSDVYIGSALVDMYSKCGDVVGAQKAFDGIT-------------------------- 459
++ D+ +G+ALVDMY+KC + A+ FDG+
Sbjct: 262 DKYRDDLVLGNALVDMYAKCNRLKQARWIFDGMPVRNVVSETSMVSGYAKAASVKAARLM 321
Query: 460 -----ERNVVSWNTLITCYEQNGPASEALNVFSKMMNNGHDPDERSLASVVSACATLSAV 624
ERN+VSWN LI+ Y QNG EA+ +F + P + ++++ACA+L +
Sbjct: 322 FAKMMERNIVSWNALISGYTQNGENEEAVGLFLLLKRESVLPTHYTFGNLLNACASLVDL 381
Query: 625 KEGREIHAQVI----KFDCFRD-DIVICNTLVDMYAKC 723
+ GR+ H ++ KF + DI + N+L+DMY KC
Sbjct: 382 QLGRQAHVHLLKHGFKFQVGEEPDIFVGNSLIDMYMKC 419
Score = 88.2 bits (217), Expect = 2e-15
Identities = 55/175 (31%), Positives = 90/175 (51%), Gaps = 31/175 (17%)
Frame = +1
Query: 292 LSACSGLQDWKMGTQIHASVSKSRFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNV 471
L +C + + +IHA V K++F S+++I + L+D Y KCG + A+K FD + +RN
Sbjct: 6 LDSCIRTKSARDAHRIHARVIKTQFSSEIFIQNRLIDAYGKCGCLDDARKLFDKMPQRNT 65
Query: 472 VSWNTLITCYEQNGPASEALNVFSKM----------MNNG---HDP-------------- 570
+WN++I+ + G +A+ +F M M +G HD
Sbjct: 66 FTWNSIISTLTKLGFIDDAVQIFRLMPEPDQCSWNSMVSGFAQHDRFEEALEYFVKLHVE 125
Query: 571 ----DERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAKC 723
+E S S +SACA L +K G +IHA + K C+ D+ + + L+DMY+KC
Sbjct: 126 DFVLNEYSFGSALSACAGLRKLKMGVQIHAFIAK-SCYSSDVYMGSALIDMYSKC 179
>ref|XP_004237174.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Solanum lycopersicum]
Length = 709
Score = 334 bits (857), Expect = 2e-89
Identities = 156/240 (65%), Positives = 196/240 (81%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
ID YGK G L A+ VF KMP++NTFTWNSM++A + S L+ EAE+ F +MPEPDQC+WN
Sbjct: 64 IDTYGKSGVLKYAKNVFDKMPERNTFTWNSMMNAYTASRLVFEAEELFYMMPEPDQCSWN 123
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
LMVS FAQ E D S+E+LV+MH+EDF+ N Y YGS LSAC+GL+D +MGTQ+HASV+KS
Sbjct: 124 LMVSSFAQCELFDSSIEFLVRMHKEDFVLNEYGYGSGLSACAGLRDSRMGTQLHASVAKS 183
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
R+ VY+GSAL+DMYSK GDV A K F+G+ ERNVVSWN+L++CYEQNGP EAL VF
Sbjct: 184 RYSRSVYMGSALIDMYSKTGDVDCAAKVFNGMCERNVVSWNSLLSCYEQNGPVKEALVVF 243
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
++MM G PDE++LASVVSACA+L A++EG+EIHAQ++K D RDD++ICN LVDMYAK
Sbjct: 244 ARMMEFGFKPDEKTLASVVSACASLCAIREGKEIHAQIVKSDKLRDDLIICNALVDMYAK 303
Score = 140 bits (353), Expect = 4e-31
Identities = 75/218 (34%), Positives = 118/218 (54%), Gaps = 6/218 (2%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y K G + AR +F +MP ++ + ++S + + A FS M E + +WN
Sbjct: 298 VDMYAKSGRIAEARWIFDRMPVRSVVSDTCLVSGYARVASVKTARAVFSGMIERNVVSWN 357
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
+++G+ Q +++L + + RE YT+G+ L+AC+ L D K+G Q H + K
Sbjct: 358 ALIAGYTQNGNNEEALNLFLMLKRESVWPTHYTFGNLLNACANLADLKLGRQAHTHILKH 417
Query: 361 RFL------SDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPAS 522
F DV++G+AL+DMY KCG V F + +R+ VSWN +I Y QNG A
Sbjct: 418 GFRFQNGPEPDVFVGNALIDMYMKCGSVEDGSCVFTKMLDRDWVSWNAVIVGYAQNGHAM 477
Query: 523 EALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGR 636
EAL F+ M+ G PD ++ V+ AC+ V+EGR
Sbjct: 478 EALETFNAMLVYGEKPDHVTMIGVLCACSHAGLVEEGR 515
Score = 117 bits (294), Expect = 3e-24
Identities = 80/257 (31%), Positives = 126/257 (49%), Gaps = 38/257 (14%)
Frame = +1
Query: 67 KNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWNLMVSGFAQAEFLDKSLEYLVKM 246
++ + +++I S +G +D A F+ M E + +WN ++S + Q + ++L +M
Sbjct: 187 RSVYMGSALIDMYSKTGDVDCAAKVFNGMCERNVVSWNSLLSCYEQNGPVKEALVVFARM 246
Query: 247 HREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS-RFLSDVYIGSALVDMYSKCGD 423
F + T S +SAC+ L + G +IHA + KS + D+ I +ALVDMY+K G
Sbjct: 247 MEFGFKPDEKTLASVVSACASLCAIREGKEIHAQIVKSDKLRDDLIICNALVDMYAKSGR 306
Query: 424 VVGAQKAFD-------------------------------GITERNVVSWNTLITCYEQN 510
+ A+ FD G+ ERNVVSWN LI Y QN
Sbjct: 307 IAEARWIFDRMPVRSVVSDTCLVSGYARVASVKTARAVFSGMIERNVVSWNALIAGYTQN 366
Query: 511 GPASEALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFR----- 675
G EALN+F + P + ++++ACA L+ +K GR+ H ++K FR
Sbjct: 367 GNNEEALNLFLMLKRESVWPTHYTFGNLLNACANLADLKLGRQAHTHILKHG-FRFQNGP 425
Query: 676 -DDIVICNTLVDMYAKC 723
D+ + N L+DMY KC
Sbjct: 426 EPDVFVGNALIDMYMKC 442
Score = 62.4 bits (150), Expect = 1e-07
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 31/159 (19%)
Frame = +1
Query: 337 IHASVSKSRFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGP 516
+H V K+ F S+V+I + L+D Y K G + A+ FD + ERN +WN+++ Y +
Sbjct: 44 VHCRVLKTHFSSEVFINNKLIDTYGKSGVLKYAKNVFDKMPERNTFTWNSMMNAYTASRL 103
Query: 517 ASEALNVFSKM---------------------------MNNGHDPD----ERSLASVVSA 603
EA +F M + H D E S +SA
Sbjct: 104 VFEAEELFYMMPEPDQCSWNLMVSSFAQCELFDSSIEFLVRMHKEDFVLNEYGYGSGLSA 163
Query: 604 CATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
CA L + G ++HA V K + + + + L+DMY+K
Sbjct: 164 CAGLRDSRMGTQLHASVAK-SRYSRSVYMGSALIDMYSK 201
>ref|XP_006359274.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Solanum tuberosum]
Length = 709
Score = 333 bits (854), Expect = 3e-89
Identities = 156/240 (65%), Positives = 197/240 (82%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
ID YGK G L A++VF KMP++NTFTWNSMI+A + S L+ EAE+ F LMPEPDQC+WN
Sbjct: 64 IDTYGKSGMLKYAKKVFDKMPERNTFTWNSMINAYTASRLVFEAEELFYLMPEPDQCSWN 123
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
LMVS FAQ E D S+E+LV+MH+EDF+ N Y YGS LSAC+GL+D +MGTQ+HASV+KS
Sbjct: 124 LMVSSFAQCELFDSSIEFLVRMHKEDFVLNEYGYGSGLSACAGLRDLRMGTQLHASVAKS 183
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
R+ VY+GSAL+DMYSK G+V A K F+G+ ERNVVSWN+L++CYEQNGP EAL VF
Sbjct: 184 RYSRSVYMGSALIDMYSKTGNVDCAAKVFNGMCERNVVSWNSLLSCYEQNGPVKEALVVF 243
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
++MM G PDE++LASVVSACA+L A++EG+EIHA+++K D RDD++ICN LVDMYAK
Sbjct: 244 ARMMEFGFKPDEKTLASVVSACASLCAIREGKEIHARILKSDKLRDDLIICNALVDMYAK 303
Score = 140 bits (353), Expect = 4e-31
Identities = 75/219 (34%), Positives = 119/219 (54%), Gaps = 6/219 (2%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y K G + AR +F +MP ++ + ++S + + A F M E + +WN
Sbjct: 298 VDMYAKFGRIAEARWIFDRMPVRSVVSDTCLVSGYARVASVKTARAVFLGMIERNVVSWN 357
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
+++G+ Q +++L + + RE YT+G+ L+AC+ L D K+G Q HA + K
Sbjct: 358 ALIAGYTQNGNNEEALNLFLMLKREPVWPTHYTFGNLLNACANLADLKLGRQAHAHILKH 417
Query: 361 RFL------SDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPAS 522
F DV++G+AL+DMY KCG V F + +R+ VSWN +I Y QNG A
Sbjct: 418 GFRFQNGPEPDVFVGNALIDMYMKCGSVEDGSCVFTKMLDRDWVSWNAIIVGYAQNGHAM 477
Query: 523 EALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGRE 639
EAL F M+ +G PD ++ V+ AC+ V+EGR+
Sbjct: 478 EALETFKVMLVSGEKPDHVTMIGVLCACSHAGLVEEGRQ 516
Score = 118 bits (295), Expect = 2e-24
Identities = 81/257 (31%), Positives = 127/257 (49%), Gaps = 38/257 (14%)
Frame = +1
Query: 67 KNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWNLMVSGFAQAEFLDKSLEYLVKM 246
++ + +++I S +G +D A F+ M E + +WN ++S + Q + ++L +M
Sbjct: 187 RSVYMGSALIDMYSKTGNVDCAAKVFNGMCERNVVSWNSLLSCYEQNGPVKEALVVFARM 246
Query: 247 HREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS-RFLSDVYIGSALVDMYSKCGD 423
F + T S +SAC+ L + G +IHA + KS + D+ I +ALVDMY+K G
Sbjct: 247 MEFGFKPDEKTLASVVSACASLCAIREGKEIHARILKSDKLRDDLIICNALVDMYAKFGR 306
Query: 424 VVGAQKAFD-------------------------------GITERNVVSWNTLITCYEQN 510
+ A+ FD G+ ERNVVSWN LI Y QN
Sbjct: 307 IAEARWIFDRMPVRSVVSDTCLVSGYARVASVKTARAVFLGMIERNVVSWNALIAGYTQN 366
Query: 511 GPASEALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFR----- 675
G EALN+F + P + ++++ACA L+ +K GR+ HA ++K FR
Sbjct: 367 GNNEEALNLFLMLKREPVWPTHYTFGNLLNACANLADLKLGRQAHAHILKHG-FRFQNGP 425
Query: 676 -DDIVICNTLVDMYAKC 723
D+ + N L+DMY KC
Sbjct: 426 EPDVFVGNALIDMYMKC 442
Score = 65.9 bits (159), Expect = 1e-08
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 31/159 (19%)
Frame = +1
Query: 337 IHASVSKSRFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGP 516
+H + K+ F S+V+I + L+D Y K G + A+K FD + ERN +WN++I Y +
Sbjct: 44 VHCRILKTHFSSEVFINNKLIDTYGKSGMLKYAKKVFDKMPERNTFTWNSMINAYTASRL 103
Query: 517 ASEALNVFSKM---------------------------MNNGHDPD----ERSLASVVSA 603
EA +F M + H D E S +SA
Sbjct: 104 VFEAEELFYLMPEPDQCSWNLMVSSFAQCELFDSSIEFLVRMHKEDFVLNEYGYGSGLSA 163
Query: 604 CATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
CA L ++ G ++HA V K + + + + L+DMY+K
Sbjct: 164 CAGLRDLRMGTQLHASVAK-SRYSRSVYMGSALIDMYSK 201
>ref|XP_002517667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543299|gb|EEF44831.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 628
Score = 327 bits (839), Expect = 2e-87
Identities = 150/241 (62%), Positives = 194/241 (80%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
IDAYGKCGC D+AR++F +MP+KN F+WN+++S L SG LDE F MPEPDQC+WN
Sbjct: 61 IDAYGKCGCFDDARKIFDQMPEKNVFSWNAIVSTLVKSGFLDEGARLFVSMPEPDQCSWN 120
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
+++GFAQ + +++L Y VKMHR+ F+ N YT+GS LSAC+GL+D K+GTQIH + KS
Sbjct: 121 SLIAGFAQHDRFEEALNYFVKMHRKGFVLNEYTFGSGLSACAGLKDLKIGTQIHGLMLKS 180
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
+FL DVY+GSAL+D+YSKCG V AQ+ FDG+ ERNVVSWN+LITCYEQNGP+ EAL +F
Sbjct: 181 QFLLDVYMGSALIDIYSKCGFVDCAQRVFDGMMERNVVSWNSLITCYEQNGPSREALEIF 240
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
+MM +G +PDE +LASVVSACA+L+A K+G EIHA V+K D RDD+++ N LVDMYAK
Sbjct: 241 MRMMESGFEPDEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAK 300
Query: 721 C 723
C
Sbjct: 301 C 301
Score = 156 bits (395), Expect = 6e-36
Identities = 81/219 (36%), Positives = 126/219 (57%), Gaps = 6/219 (2%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y KCG ++ AR VF +MP +N + SM+S + + + A F+ M E + +WN
Sbjct: 295 VDMYAKCGRINEARCVFDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIERNVVSWN 354
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
+++G+ Q +++L + RE YT+G+ L+AC+ L D ++G Q HA V K
Sbjct: 355 ALIAGYTQNGENEEALRLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQAHAHVLKH 414
Query: 361 RFL------SDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPAS 522
F SDV++G+AL+DMY KCG V + F+ + ER+ VSWN +I Y QNG
Sbjct: 415 GFRFQYGEESDVFVGNALIDMYMKCGSVEEGCRIFENMVERDYVSWNAMIVGYAQNGYGM 474
Query: 523 EALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGRE 639
EAL +F KM+ +G PD ++ + AC+ V+EGR+
Sbjct: 475 EALGLFRKMLASGEKPDHVTMIGALCACSHAGLVQEGRK 513
Score = 122 bits (305), Expect = 2e-25
Identities = 80/256 (31%), Positives = 124/256 (48%), Gaps = 38/256 (14%)
Frame = +1
Query: 70 NTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWNLMVSGFAQAEFLDKSLEYLVKMH 249
+ + +++I S G +D A+ F M E + +WN +++ + Q ++LE ++M
Sbjct: 185 DVYMGSALIDIYSKCGFVDCAQRVFDGMMERNVVSWNSLITCYEQNGPSREALEIFMRMM 244
Query: 250 REDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSK-SRFLSDVYIGSALVDMYSKCGDV 426
F + T S +SAC+ L K G +IHA V K + D+ + +ALVDMY+KCG +
Sbjct: 245 ESGFEPDEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAKCGRI 304
Query: 427 VGAQKAFDGIT-------------------------------ERNVVSWNTLITCYEQNG 513
A+ FD + ERNVVSWN LI Y QNG
Sbjct: 305 NEARCVFDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIERNVVSWNALIAGYTQNG 364
Query: 514 PASEALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFR------ 675
EAL +F + P + ++++ACA L+ ++ GR+ HA V+K FR
Sbjct: 365 ENEEALRLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQAHAHVLKHG-FRFQYGEE 423
Query: 676 DDIVICNTLVDMYAKC 723
D+ + N L+DMY KC
Sbjct: 424 SDVFVGNALIDMYMKC 439
Score = 85.9 bits (211), Expect = 1e-14
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 31/179 (17%)
Frame = +1
Query: 280 YGSALSACSGLQDWKMGTQIHASVSKSRFLSDVYIGSALVDMYSKCGDVVGAQKAFDGIT 459
+ L +C + + +IHA + K++F +V+I + L+D Y KCG A+K FD +
Sbjct: 22 FAKLLDSCLKSKSLRDTRRIHARIIKTQFAYEVFIQNRLIDAYGKCGCFDDARKIFDQMP 81
Query: 460 ERNVVS-------------------------------WNTLITCYEQNGPASEALNVFSK 546
E+NV S WN+LI + Q+ EALN F K
Sbjct: 82 EKNVFSWNAIVSTLVKSGFLDEGARLFVSMPEPDQCSWNSLIAGFAQHDRFEEALNYFVK 141
Query: 547 MMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAKC 723
M G +E + S +SACA L +K G +IH ++K F D+ + + L+D+Y+KC
Sbjct: 142 MHRKGFVLNEYTFGSGLSACAGLKDLKIGTQIHGLMLKSQ-FLLDVYMGSALIDIYSKC 199
>gb|EOY00090.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 700
Score = 326 bits (836), Expect = 4e-87
Identities = 155/241 (64%), Positives = 195/241 (80%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
IDAYGKCG L++AR+VF +MP +N F+WNS I+AL+ G +DEA F M E DQC+WN
Sbjct: 61 IDAYGKCGSLEDARKVFDRMPQRNIFSWNSAITALTKFGFVDEAARIFGSMSEHDQCSWN 120
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
++SGFAQ + +++L Y V+MHREDF N Y++GSALSACSGL+D KMGTQIHA ++K+
Sbjct: 121 SIISGFAQQDKFEEALYYFVRMHREDFALNEYSFGSALSACSGLKDMKMGTQIHALMTKT 180
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
FLSDVY+GSALVDMY KCG V AQ+AFD + +RN VSWN+LITCYEQNGPA AL VF
Sbjct: 181 LFLSDVYMGSALVDMYGKCGSVCCAQRAFDDMNQRNRVSWNSLITCYEQNGPAGVALEVF 240
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
+MM+ G +PDE +LASVVSACA+LSA+KEG++IHA+V+K RDD+V+CN LVDMYAK
Sbjct: 241 LRMMDCGIEPDEVTLASVVSACASLSAIKEGKQIHARVVKCIKLRDDLVLCNALVDMYAK 300
Query: 721 C 723
C
Sbjct: 301 C 301
Score = 147 bits (372), Expect = 3e-33
Identities = 76/218 (34%), Positives = 122/218 (55%), Gaps = 6/218 (2%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y KC ++ AR VF +MP +N + SM+S + + + A F M E + +WN
Sbjct: 295 VDMYAKCSRINEARCVFDRMPVRNVVSETSMVSGYAKAASVKTARLMFMKMMERNIVSWN 354
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
+++G+ Q +++L + RE YT+G+ L+AC+ L D ++G Q H V K
Sbjct: 355 ALIAGYTQNGEDEEALRLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVLKH 414
Query: 361 RFL------SDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPAS 522
F SD+++G++L+DMY KCG V + F + ER+ VSWN +I Y QNG +
Sbjct: 415 GFRFQFGEDSDIFVGNSLIDMYMKCGSVEDGDQVFKNMMERDWVSWNAMIVGYAQNGYGN 474
Query: 523 EALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGR 636
+AL +F M+ +G PD ++ V+ AC+ V+EGR
Sbjct: 475 KALELFKNMLVSGEKPDHVTMIGVLCACSHAGLVEEGR 512
Score = 107 bits (267), Expect = 4e-21
Identities = 80/279 (28%), Positives = 120/279 (43%), Gaps = 38/279 (13%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D YGKCG + A+ F M +N + +WN
Sbjct: 193 VDMYGKCGSVCCAQRAFDDMNQRN-------------------------------RVSWN 221
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
+++ + Q +LE ++M + T S +SAC+ L K G QIHA V K
Sbjct: 222 SLITCYEQNGPAGVALEVFLRMMDCGIEPDEVTLASVVSACASLSAIKEGKQIHARVVKC 281
Query: 361 -RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGIT-------------------------- 459
+ D+ + +ALVDMY+KC + A+ FD +
Sbjct: 282 IKLRDDLVLCNALVDMYAKCSRINEARCVFDRMPVRNVVSETSMVSGYAKAASVKTARLM 341
Query: 460 -----ERNVVSWNTLITCYEQNGPASEALNVFSKMMNNGHDPDERSLASVVSACATLSAV 624
ERN+VSWN LI Y QNG EAL +F + P + ++++ACA L+ +
Sbjct: 342 FMKMMERNIVSWNALIAGYTQNGEDEEALRLFRLLKRESVCPTHYTFGNLLNACANLADL 401
Query: 625 KEGREIHAQVIKFDCFR------DDIVICNTLVDMYAKC 723
+ GR+ H V+K FR DI + N+L+DMY KC
Sbjct: 402 QLGRQAHTHVLKHG-FRFQFGEDSDIFVGNSLIDMYMKC 439
Score = 88.2 bits (217), Expect = 2e-15
Identities = 53/161 (32%), Positives = 78/161 (48%), Gaps = 31/161 (19%)
Frame = +1
Query: 334 QIHASVSKSRFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNG 513
++HA ++KS F S+ +I + L+D Y KCG + A+K FD + +RN+ SWN+ IT + G
Sbjct: 40 RLHARITKSNFASETFILNRLIDAYGKCGSLEDARKVFDRMPQRNIFSWNSAITALTKFG 99
Query: 514 PASEALNVFSKMMNNG---------------------------HDPD----ERSLASVVS 600
EA +F M + H D E S S +S
Sbjct: 100 FVDEAARIFGSMSEHDQCSWNSIISGFAQQDKFEEALYYFVRMHREDFALNEYSFGSALS 159
Query: 601 ACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAKC 723
AC+ L +K G +IHA + K F D+ + + LVDMY KC
Sbjct: 160 ACSGLKDMKMGTQIHALMTK-TLFLSDVYMGSALVDMYGKC 199
>ref|XP_004502949.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cicer arietinum]
Length = 706
Score = 323 bits (828), Expect = 3e-86
Identities = 151/241 (62%), Positives = 194/241 (80%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D YGKCGCL++AR+VF MP++N F+WN+++SAL+ G LDEA + F MPEPDQC+WN
Sbjct: 61 VDVYGKCGCLEDARKVFDHMPERNIFSWNAVLSALTKCGALDEALNVFKCMPEPDQCSWN 120
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
MVSGFAQ + +++L + MH EDF+ N Y++GSALSAC+GL D +G QIH ++KS
Sbjct: 121 AMVSGFAQRDRFEEALRFFFDMHGEDFVLNEYSFGSALSACAGLIDLNIGFQIHGLIAKS 180
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
R+ DVYIGSALVDMYSKCG V AQ+AFD + RN+VSWN+LITCYEQNGPA +AL VF
Sbjct: 181 RYSFDVYIGSALVDMYSKCGVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVF 240
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
+MMN G +PDE +LASVVSACA+LSA++EG +IHA+V+K D FR+D+V+ N LVDMYAK
Sbjct: 241 VRMMNFGIEPDEITLASVVSACASLSAIREGLQIHARVMKCDKFRNDLVLGNALVDMYAK 300
Query: 721 C 723
C
Sbjct: 301 C 301
Score = 154 bits (389), Expect = 3e-35
Identities = 78/218 (35%), Positives = 126/218 (57%), Gaps = 6/218 (2%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y KC ++ AR VF +MP ++ + SM+S + + A FS M E + +WN
Sbjct: 295 VDMYAKCKRVNEARLVFDRMPLRDVVSETSMVSGYAKVASVKAARLMFSNMTERNVVSWN 354
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
+++G+ Q ++++ + + RE YT+G+ L+AC+ L D K+G Q H + K
Sbjct: 355 ALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKH 414
Query: 361 RFL------SDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPAS 522
F SD+++G++L+DMY KCG V + F+ + ER++VSWN +I Y QNG +
Sbjct: 415 GFWFQFGEDSDIFVGNSLIDMYMKCGLVEDGRVVFEHMVERDIVSWNAMIVGYAQNGYGT 474
Query: 523 EALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGR 636
EAL +F KM +G PD ++ V+SAC+ V+EGR
Sbjct: 475 EALEIFRKMQVSGEKPDHVTMIGVLSACSHAGLVEEGR 512
Score = 124 bits (310), Expect = 4e-26
Identities = 81/255 (31%), Positives = 126/255 (49%), Gaps = 37/255 (14%)
Frame = +1
Query: 70 NTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWNLMVSGFAQAEFLDKSLEYLVKMH 249
+ + ++++ S G++ A+ F M + +WN +++ + Q K+LE V+M
Sbjct: 185 DVYIGSALVDMYSKCGVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMM 244
Query: 250 REDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSK-SRFLSDVYIGSALVDMYSKCGDV 426
+ T S +SAC+ L + G QIHA V K +F +D+ +G+ALVDMY+KC V
Sbjct: 245 NFGIEPDEITLASVVSACASLSAIREGLQIHARVMKCDKFRNDLVLGNALVDMYAKCKRV 304
Query: 427 VGAQKAFD-------------------------------GITERNVVSWNTLITCYEQNG 513
A+ FD +TERNVVSWN LI Y QNG
Sbjct: 305 NEARLVFDRMPLRDVVSETSMVSGYAKVASVKAARLMFSNMTERNVVSWNALIAGYTQNG 364
Query: 514 PASEALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIK----FDCFRD- 678
EA+ +F + P + ++++ACA L+ +K GR+ H Q++K F D
Sbjct: 365 ENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQFGEDS 424
Query: 679 DIVICNTLVDMYAKC 723
DI + N+L+DMY KC
Sbjct: 425 DIFVGNSLIDMYMKC 439
Score = 87.8 bits (216), Expect = 3e-15
Identities = 58/179 (32%), Positives = 87/179 (48%), Gaps = 31/179 (17%)
Frame = +1
Query: 280 YGSALSACSGLQDWKMGTQIHASVSKSRFLSDVYIGSALVDMYSKCGDVVGAQKAFDGIT 459
+ L C + ++HA + K++F S+++I + LVD+Y KCG + A+K FD +
Sbjct: 22 FAKLLDCCVRSKSVFEARRVHARIIKTQFSSEIFIQNRLVDVYGKCGCLEDARKVFDHMP 81
Query: 460 ERNVVSWNTLITCYEQNGPASEALNVFSKM----------MNNG---------------- 561
ERN+ SWN +++ + G EALNVF M M +G
Sbjct: 82 ERNIFSWNAVLSALTKCGALDEALNVFKCMPEPDQCSWNAMVSGFAQRDRFEEALRFFFD 141
Query: 562 -HDPD----ERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAKC 723
H D E S S +SACA L + G +IH + K + D+ I + LVDMY+KC
Sbjct: 142 MHGEDFVLNEYSFGSALSACAGLIDLNIGFQIHGLIAK-SRYSFDVYIGSALVDMYSKC 199
>ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 323 bits (828), Expect = 3e-86
Identities = 152/241 (63%), Positives = 196/241 (81%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+DAYGKCG ++AR+VF +MP +NTF++N+++S L+ G LDEA + F MPEPDQC+WN
Sbjct: 61 VDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWN 120
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
MVSGFAQ + +++L + V MH EDF+ N Y++GSALSAC+GL D MG QIHA +SKS
Sbjct: 121 AMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKS 180
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
R+L DVY+GSALVDMYSKCG V AQ+AFDG+ RN+VSWN+LITCYEQNGPA +AL VF
Sbjct: 181 RYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVF 240
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
MM+NG +PDE +LASVVSACA+ SA++EG +IHA+V+K D +R+D+V+ N LVDMYAK
Sbjct: 241 VMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAK 300
Query: 721 C 723
C
Sbjct: 301 C 301
Score = 153 bits (386), Expect = 6e-35
Identities = 78/218 (35%), Positives = 125/218 (57%), Gaps = 6/218 (2%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y KC ++ AR VF +MP +N + SM+ + + + A FS M E + +WN
Sbjct: 295 VDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWN 354
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
+++G+ Q ++++ + + RE YT+G+ L+AC+ L D K+G Q H + K
Sbjct: 355 ALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKH 414
Query: 361 RFL------SDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPAS 522
F SD+++G++L+DMY KCG V F+ + ER+VVSWN +I Y QNG +
Sbjct: 415 GFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGT 474
Query: 523 EALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGR 636
AL +F KM+ +G PD ++ V+SAC+ V+EGR
Sbjct: 475 NALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGR 512
Score = 114 bits (285), Expect = 3e-23
Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 37/255 (14%)
Frame = +1
Query: 70 NTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWNLMVSGFAQAEFLDKSLEYLVKMH 249
+ + ++++ S G++ A+ F M + +WN +++ + Q K+LE V M
Sbjct: 185 DVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMM 244
Query: 250 REDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSK-SRFLSDVYIGSALVDMYSKCGDV 426
+ T S +SAC+ + G QIHA V K ++ +D+ +G+ALVDMY+KC V
Sbjct: 245 DNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRV 304
Query: 427 VGAQKAFD-------------------------------GITERNVVSWNTLITCYEQNG 513
A+ FD + E+NVVSWN LI Y QNG
Sbjct: 305 NEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNG 364
Query: 514 PASEALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCF-----RD 678
EA+ +F + P + ++++ACA L+ +K GR+ H Q++K +
Sbjct: 365 ENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEES 424
Query: 679 DIVICNTLVDMYAKC 723
DI + N+L+DMY KC
Sbjct: 425 DIFVGNSLIDMYMKC 439
Score = 82.4 bits (202), Expect = 1e-13
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Frame = +1
Query: 232 YLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKSRFLSDVYIGSALVDMYS 411
++ K+ E ++ + L +C + +IHA + K++F S+++I + LVD Y
Sbjct: 6 FVQKLVGELCFLDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYG 65
Query: 412 KCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVFSKM----------MNNG 561
KCG A+K FD + +RN S+N +++ + G EA NVF M M +G
Sbjct: 66 KCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSG 125
Query: 562 ---HDP------------------DERSLASVVSACATLSAVKEGREIHAQVIKFDCFRD 678
HD +E S S +SACA L+ + G +IHA + K +
Sbjct: 126 FAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISK-SRYLL 184
Query: 679 DIVICNTLVDMYAKC 723
D+ + + LVDMY+KC
Sbjct: 185 DVYMGSALVDMYSKC 199
>gb|EXC23679.1| hypothetical protein L484_015589 [Morus notabilis]
Length = 652
Score = 320 bits (820), Expect = 3e-85
Identities = 152/241 (63%), Positives = 197/241 (81%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
ID YGKCGCL++AR+VF +M ++NTF+ NS+I L +GLLDEA F +MP+ DQCTWN
Sbjct: 6 IDVYGKCGCLEDARKVFDRMSERNTFSGNSIICVLMKAGLLDEAMQIFEMMPDHDQCTWN 65
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
+V+GFAQ + +LE LVKMH E+FM N Y++GSALSAC+GL+D +MG QIHA +SKS
Sbjct: 66 SLVAGFAQHNWHGDALECLVKMHGENFMLNDYSFGSALSACAGLKDLRMGIQIHAVISKS 125
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
R+ S+VY+GSAL+DMYSKCG V AQ+ FD + ERN VSWN+LI+CYEQNGPASEA++VF
Sbjct: 126 RYSSNVYMGSALIDMYSKCGSVTCAQRVFDWMEERNRVSWNSLISCYEQNGPASEAIDVF 185
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
+MM++G +PDE +LASVVSACA+L AVKEG +IH +V+K + FRDD+++ N LVDMYAK
Sbjct: 186 RRMMDSGVEPDEVTLASVVSACASLLAVKEGLQIHGRVMKCEKFRDDLILGNALVDMYAK 245
Query: 721 C 723
C
Sbjct: 246 C 246
Score = 158 bits (400), Expect = 1e-36
Identities = 80/218 (36%), Positives = 126/218 (57%), Gaps = 6/218 (2%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y KCG +D AR VF +MP +N + SMIS + + + A F+ M E + +WN
Sbjct: 240 VDMYAKCGRIDEARWVFDRMPIRNVVSETSMISGYAKAAGVKAARLMFTKMTERNVVSWN 299
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
++SG+ Q +++L + + RE YT+G+ L+AC+ L D ++G Q H V K
Sbjct: 300 ALISGYTQIGENEEALSLFLLLKRESVWPTHYTFGNLLNACANLADLQLGKQAHTHVVKH 359
Query: 361 RFL------SDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPAS 522
F D+++G++LVDMY KCG + + F+ + ER+ VSWN +I Y QNG +
Sbjct: 360 GFRFQAGEEPDIFVGNSLVDMYMKCGSIGDGCRVFENMAERDHVSWNAMIVGYAQNGYGA 419
Query: 523 EALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGR 636
EAL +FS+M+ +G PD ++ V+ AC+ V +GR
Sbjct: 420 EALGIFSRMLASGEQPDHVTMIGVLCACSHAGLVVQGR 457
Score = 126 bits (316), Expect = 8e-27
Identities = 93/279 (33%), Positives = 127/279 (45%), Gaps = 38/279 (13%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
ID Y KCG + A+ VF M ++N +WNS+IS +G EA D F M
Sbjct: 138 IDMYSKCGSVTCAQRVFDWMEERNRVSWNSLISCYEQNGPASEAIDVFRRM--------- 188
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSK- 357
M SG E T S +SAC+ L K G QIH V K
Sbjct: 189 -MDSGVEPDEV---------------------TLASVVSACASLLAVKEGLQIHGRVMKC 226
Query: 358 SRFLSDVYIGSALVDMYSKCGDVVGAQKAFDGI--------------------------- 456
+F D+ +G+ALVDMY+KCG + A+ FD +
Sbjct: 227 EKFRDDLILGNALVDMYAKCGRIDEARWVFDRMPIRNVVSETSMISGYAKAAGVKAARLM 286
Query: 457 ----TERNVVSWNTLITCYEQNGPASEALNVFSKMMNNGHDPDERSLASVVSACATLSAV 624
TERNVVSWN LI+ Y Q G EAL++F + P + ++++ACA L+ +
Sbjct: 287 FTKMTERNVVSWNALISGYTQIGENEEALSLFLLLKRESVWPTHYTFGNLLNACANLADL 346
Query: 625 KEGREIHAQVIKFDCFR------DDIVICNTLVDMYAKC 723
+ G++ H V+K FR DI + N+LVDMY KC
Sbjct: 347 QLGKQAHTHVVKHG-FRFQAGEEPDIFVGNSLVDMYMKC 384
>gb|ESW09789.1| hypothetical protein PHAVU_009G156000g [Phaseolus vulgaris]
Length = 705
Score = 314 bits (804), Expect = 2e-83
Identities = 148/241 (61%), Positives = 192/241 (79%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+DAYGKCGC + AR+VF MP +NTF++N+++S + G LDEA F MPEPDQC+WN
Sbjct: 61 VDAYGKCGCFEEARKVFVHMPLRNTFSYNAILSVFTKFGKLDEALSVFKSMPEPDQCSWN 120
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
MVSGFAQ + +++L++ + MH EDF+ N Y++GSALSAC+GL D +G QIHA +SK
Sbjct: 121 AMVSGFAQHDRFEEALKFFLDMHSEDFVVNEYSFGSALSACAGLTDLNVGVQIHALISKC 180
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
R+L DVY+GSALVDMYSKCG V AQ+AFD + RN+VSWN+LITCYEQNGPA +AL +F
Sbjct: 181 RYLLDVYMGSALVDMYSKCGVVTCAQRAFDEMVVRNIVSWNSLITCYEQNGPAQKALEIF 240
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
+MM+N +PDE ++ASVVSACA+LSA +EG +IHA+VIK D FR+D+V+ N LVDMYAK
Sbjct: 241 VRMMDNRVEPDEITMASVVSACASLSATREGLQIHARVIKRDKFRNDLVLGNALVDMYAK 300
Query: 721 C 723
C
Sbjct: 301 C 301
Score = 150 bits (380), Expect = 3e-34
Identities = 76/218 (34%), Positives = 126/218 (57%), Gaps = 6/218 (2%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y KC + AR VF +MP ++ + SM+S + + + A FS M E + +WN
Sbjct: 295 VDMYAKCKRVREARLVFDRMPVRDVVSETSMVSGYARAASVKAARLMFSKMMERNVVSWN 354
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
+++G+ Q ++++ + + R+ YT+G+ L+AC+ L D K+G Q H + K
Sbjct: 355 ALIAGYTQNGENEEAVRLFLLLKRDSLWPTHYTFGNLLNACANLADLKLGRQAHTHILKH 414
Query: 361 RFL------SDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPAS 522
F SD+++G++L+DMY KCG V F+ + ER++VSWN +I Y QNG +
Sbjct: 415 GFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLIFEHMVERDIVSWNAMIVGYAQNGYGT 474
Query: 523 EALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGR 636
+AL +F KM+ +G PD ++ V+SAC+ V+EGR
Sbjct: 475 DALEIFRKMLLSGEKPDHVTMIGVLSACSHAGLVEEGR 512
Score = 121 bits (304), Expect = 2e-25
Identities = 85/278 (30%), Positives = 126/278 (45%), Gaps = 37/278 (13%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y KCG + A+ F +M +N +WNS+I+ +G P Q
Sbjct: 193 VDMYSKCGVVTCAQRAFDEMVVRNIVSWNSLITCYEQNG--------------PAQ---- 234
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSK- 357
K+LE V+M + T S +SAC+ L + G QIHA V K
Sbjct: 235 -------------KALEIFVRMMDNRVEPDEITMASVVSACASLSATREGLQIHARVIKR 281
Query: 358 SRFLSDVYIGSALVDMYSKCGDVVGAQKAFDGIT-------------------------- 459
+F +D+ +G+ALVDMY+KC V A+ FD +
Sbjct: 282 DKFRNDLVLGNALVDMYAKCKRVREARLVFDRMPVRDVVSETSMVSGYARAASVKAARLM 341
Query: 460 -----ERNVVSWNTLITCYEQNGPASEALNVFSKMMNNGHDPDERSLASVVSACATLSAV 624
ERNVVSWN LI Y QNG EA+ +F + + P + ++++ACA L+ +
Sbjct: 342 FSKMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRDSLWPTHYTFGNLLNACANLADL 401
Query: 625 KEGREIHAQVIKFDCF-----RDDIVICNTLVDMYAKC 723
K GR+ H ++K + DI + N+L+DMY KC
Sbjct: 402 KLGRQAHTHILKHGFWFQSGEESDIFVGNSLIDMYMKC 439
Score = 75.5 bits (184), Expect = 2e-11
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 31/179 (17%)
Frame = +1
Query: 280 YGSALSACSGLQDWKMGTQIHASVSKSRFLSDVYIGSALVDMYSKCGDVVGAQKAFDGIT 459
+ L +C + +IH + K++F S+++I + LVD Y KCG A+K F +
Sbjct: 22 FAKLLDSCIRSKSGIDARRIHCRIIKAQFSSEIFIQNRLVDAYGKCGCFEEARKVFVHMP 81
Query: 460 ERNVVSWNTLITCYEQNGPASEALNVFSKM----------MNNG---HD----------- 567
RN S+N +++ + + G EAL+VF M M +G HD
Sbjct: 82 LRNTFSYNAILSVFTKFGKLDEALSVFKSMPEPDQCSWNAMVSGFAQHDRFEEALKFFLD 141
Query: 568 -------PDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAKC 723
+E S S +SACA L+ + G +IHA + K + D+ + + LVDMY+KC
Sbjct: 142 MHSEDFVVNEYSFGSALSACAGLTDLNVGVQIHALISKCR-YLLDVYMGSALVDMYSKC 199
>ref|XP_006432168.1| hypothetical protein CICLE_v10000448mg [Citrus clementina]
gi|568821173|ref|XP_006465064.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g13600-like [Citrus sinensis]
gi|557534290|gb|ESR45408.1| hypothetical protein
CICLE_v10000448mg [Citrus clementina]
Length = 705
Score = 314 bits (804), Expect = 2e-83
Identities = 149/241 (61%), Positives = 191/241 (79%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
ID Y KCGCL AR+VF KM +KN FTWNS+I+ L G +D+A F+ MPE DQC+WN
Sbjct: 61 IDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWN 120
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
MVSGFAQ + ++L Y VKMH E+F N Y++GSALSAC+G D+KMGTQ+HA +SKS
Sbjct: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALNEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
R+ SDVY+GSAL+DMY KCG V A++ FDG+ ERN+VSWN+LITCYEQNGPAS+AL VF
Sbjct: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
+MM +G +PDE +LASVVSACA+L+A KEG +IHA++++ + R+D+V+ N LVDMYAK
Sbjct: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
Query: 721 C 723
C
Sbjct: 301 C 301
Score = 151 bits (382), Expect = 2e-34
Identities = 82/226 (36%), Positives = 130/226 (57%), Gaps = 6/226 (2%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y KCG L+ AR VF +MP +N + SM+S + + + A F+ M E + +WN
Sbjct: 295 VDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN 354
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
+++G+ Q +++L + RE YT+G+ L+AC+ L D ++G Q H V K
Sbjct: 355 ALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
Query: 361 --RFLS----DVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPAS 522
RFLS D+++G++L+DMY KCG V + F+ + ER+ VSWN +I QNG +
Sbjct: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEEGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
Query: 523 EALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIK 660
EAL +F KM+ G PD ++ V+ AC+ V+EGR+ + + K
Sbjct: 475 EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
Score = 127 bits (318), Expect = 5e-27
Identities = 87/278 (31%), Positives = 124/278 (44%), Gaps = 37/278 (13%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
ID YGKCG + AR VF M ++N +WNS+I+ +G +A
Sbjct: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA---------------- 236
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
LE V+M + T S +SAC+ L +K G QIHA + +
Sbjct: 237 ---------------LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRC 281
Query: 361 RFL-SDVYIGSALVDMYSKCG-------------------------------DVVGAQKA 444
L +D+ +G+ALVDMY+KCG V A+
Sbjct: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLM 341
Query: 445 FDGITERNVVSWNTLITCYEQNGPASEALNVFSKMMNNGHDPDERSLASVVSACATLSAV 624
F + ERNVVSWN LI Y QNG EAL +F + P + ++++ACA L+ +
Sbjct: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADL 401
Query: 625 KEGREIHAQVIK-----FDCFRDDIVICNTLVDMYAKC 723
+ GR+ H V+K DI + N+L+DMY KC
Sbjct: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
Score = 90.1 bits (222), Expect = 6e-16
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 31/179 (17%)
Frame = +1
Query: 280 YGSALSACSGLQDWKMGTQIHASVSKSRFLSDVYIGSALVDMYSKCGDVVGAQKAFDGIT 459
+ L +C + ++HA + KS+F S+++I + L+D+Y+KCG + GA+K FD ++
Sbjct: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
Query: 460 ERNVVSWNTLIT-----------------------C--------YEQNGPASEALNVFSK 546
+NV +WN++IT C + Q+ SEAL F K
Sbjct: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
Query: 547 MMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAKC 723
M + +E S S +SACA K G ++HA + K + D+ + + L+DMY KC
Sbjct: 142 MHSENFALNEYSFGSALSACAGSVDFKMGTQVHALLSK-SRYSSDVYMGSALIDMYGKC 199
>ref|XP_006297108.1| hypothetical protein CARUB_v10013108mg [Capsella rubella]
gi|482565817|gb|EOA30006.1| hypothetical protein
CARUB_v10013108mg [Capsella rubella]
Length = 691
Score = 311 bits (796), Expect = 2e-82
Identities = 147/241 (60%), Positives = 188/241 (78%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
IDAYGKCG LD+ R+VF +MP++N +TWNS+++AL+ G LDEA+ F L+PE DQCTWN
Sbjct: 62 IDAYGKCGSLDDGRQVFDEMPERNVYTWNSVLTALTKLGFLDEADSLFWLVPERDQCTWN 121
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
MVSGFAQ + +++L Y MH+E F+ N Y++ S LSACSGL D G QIH+ ++KS
Sbjct: 122 SMVSGFAQHDRCEEALCYFGMMHKEGFVLNEYSFASGLSACSGLNDMNRGVQIHSLIAKS 181
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
LSDVYIGSALVDMYSKCGDV AQ+ FD + +RNVVSWN+LITCYEQNGPA EAL VF
Sbjct: 182 PCLSDVYIGSALVDMYSKCGDVDDAQRVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVF 241
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
M+ + +PDE +LASV+SACA+LSA+K G+E+H +V+K D R+DI++ N VDMYAK
Sbjct: 242 QVMLESWVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILTNAFVDMYAK 301
Query: 721 C 723
C
Sbjct: 302 C 302
Score = 144 bits (362), Expect = 4e-32
Identities = 75/226 (33%), Positives = 121/226 (53%), Gaps = 6/226 (2%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y KC + AR +F MP +N SMIS +++ A F+ M E + +WN
Sbjct: 296 VDMYAKCSKISEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNIVSWN 355
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
++SG+ Q +++L + RE YT+ + L AC+ L + +G Q H V K
Sbjct: 356 ALISGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLAELHLGMQAHVHVLKH 415
Query: 361 RFL------SDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPAS 522
F +D+++G++L+DMY KCG V F + ER+ VSWN +I + QNG +
Sbjct: 416 GFKFQSGEEADIFVGNSLIDMYVKCGCVEDGYLVFRKMMERDCVSWNAMIVGFAQNGYGN 475
Query: 523 EALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIK 660
EAL +F +M+++G PD ++ V+SAC V+EGR + + +
Sbjct: 476 EALELFREMLDSGEKPDHVTMIGVLSACGHAGFVEEGRHYFSSMTR 521
Score = 122 bits (307), Expect = 9e-26
Identities = 83/282 (29%), Positives = 127/282 (45%), Gaps = 41/282 (14%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLM----PEPDQ 168
+D Y KCG +D+A+ VF +M D+N +WNS+I+ +G EA F +M EPD+
Sbjct: 194 VDMYSKCGDVDDAQRVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDE 253
Query: 169 CTWNLMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHAS 348
T S +SAC+ L K+G ++H
Sbjct: 254 VT-----------------------------------LASVISACASLSAIKVGQEVHGR 278
Query: 349 VSKS-RFLSDVYIGSALVDMYSKCGDVVGAQKAFDG------------------------ 453
V K+ + +D+ + +A VDMY+KC + A+ FD
Sbjct: 279 VVKNDKLRNDIILTNAFVDMYAKCSKISEARFIFDSMPIRNVIAETSMISGYAMAASTKA 338
Query: 454 -------ITERNVVSWNTLITCYEQNGPASEALNVFSKMMNNGHDPDERSLASVVSACAT 612
+ ERN+VSWN LI+ Y QNG EAL++F + P + A+++ ACA
Sbjct: 339 ARLMFTKMAERNIVSWNALISGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACAD 398
Query: 613 LSAVKEGREIHAQVI----KFDCFRD-DIVICNTLVDMYAKC 723
L+ + G + H V+ KF + DI + N+L+DMY KC
Sbjct: 399 LAELHLGMQAHVHVLKHGFKFQSGEEADIFVGNSLIDMYVKC 440
Score = 85.1 bits (209), Expect = 2e-14
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 31/160 (19%)
Frame = +1
Query: 337 IHASVSKSRFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITC------ 498
+HA + KS F ++ +I + L+D Y KCG + ++ FD + ERNV +WN+++T
Sbjct: 42 VHACILKSGFKNETFIQNRLIDAYGKCGSLDDGRQVFDEMPERNVYTWNSVLTALTKLGF 101
Query: 499 -------------------------YEQNGPASEALNVFSKMMNNGHDPDERSLASVVSA 603
+ Q+ EAL F M G +E S AS +SA
Sbjct: 102 LDEADSLFWLVPERDQCTWNSMVSGFAQHDRCEEALCYFGMMHKEGFVLNEYSFASGLSA 161
Query: 604 CATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAKC 723
C+ L+ + G +IH+ + K C D+ I + LVDMY+KC
Sbjct: 162 CSGLNDMNRGVQIHSLIAKSPCL-SDVYIGSALVDMYSKC 200
>ref|XP_006297107.1| hypothetical protein CARUB_v10013108mg [Capsella rubella]
gi|482565816|gb|EOA30005.1| hypothetical protein
CARUB_v10013108mg [Capsella rubella]
Length = 690
Score = 311 bits (796), Expect = 2e-82
Identities = 147/241 (60%), Positives = 188/241 (78%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
IDAYGKCG LD+ R+VF +MP++N +TWNS+++AL+ G LDEA+ F L+PE DQCTWN
Sbjct: 62 IDAYGKCGSLDDGRQVFDEMPERNVYTWNSVLTALTKLGFLDEADSLFWLVPERDQCTWN 121
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
MVSGFAQ + +++L Y MH+E F+ N Y++ S LSACSGL D G QIH+ ++KS
Sbjct: 122 SMVSGFAQHDRCEEALCYFGMMHKEGFVLNEYSFASGLSACSGLNDMNRGVQIHSLIAKS 181
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
LSDVYIGSALVDMYSKCGDV AQ+ FD + +RNVVSWN+LITCYEQNGPA EAL VF
Sbjct: 182 PCLSDVYIGSALVDMYSKCGDVDDAQRVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVF 241
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
M+ + +PDE +LASV+SACA+LSA+K G+E+H +V+K D R+DI++ N VDMYAK
Sbjct: 242 QVMLESWVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILTNAFVDMYAK 301
Query: 721 C 723
C
Sbjct: 302 C 302
Score = 144 bits (362), Expect = 4e-32
Identities = 75/226 (33%), Positives = 121/226 (53%), Gaps = 6/226 (2%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y KC + AR +F MP +N SMIS +++ A F+ M E + +WN
Sbjct: 296 VDMYAKCSKISEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNIVSWN 355
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
++SG+ Q +++L + RE YT+ + L AC+ L + +G Q H V K
Sbjct: 356 ALISGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLAELHLGMQAHVHVLKH 415
Query: 361 RFL------SDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPAS 522
F +D+++G++L+DMY KCG V F + ER+ VSWN +I + QNG +
Sbjct: 416 GFKFQSGEEADIFVGNSLIDMYVKCGCVEDGYLVFRKMMERDCVSWNAMIVGFAQNGYGN 475
Query: 523 EALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIK 660
EAL +F +M+++G PD ++ V+SAC V+EGR + + +
Sbjct: 476 EALELFREMLDSGEKPDHVTMIGVLSACGHAGFVEEGRHYFSSMTR 521
Score = 122 bits (307), Expect = 9e-26
Identities = 83/282 (29%), Positives = 127/282 (45%), Gaps = 41/282 (14%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLM----PEPDQ 168
+D Y KCG +D+A+ VF +M D+N +WNS+I+ +G EA F +M EPD+
Sbjct: 194 VDMYSKCGDVDDAQRVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDE 253
Query: 169 CTWNLMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHAS 348
T S +SAC+ L K+G ++H
Sbjct: 254 VT-----------------------------------LASVISACASLSAIKVGQEVHGR 278
Query: 349 VSKS-RFLSDVYIGSALVDMYSKCGDVVGAQKAFDG------------------------ 453
V K+ + +D+ + +A VDMY+KC + A+ FD
Sbjct: 279 VVKNDKLRNDIILTNAFVDMYAKCSKISEARFIFDSMPIRNVIAETSMISGYAMAASTKA 338
Query: 454 -------ITERNVVSWNTLITCYEQNGPASEALNVFSKMMNNGHDPDERSLASVVSACAT 612
+ ERN+VSWN LI+ Y QNG EAL++F + P + A+++ ACA
Sbjct: 339 ARLMFTKMAERNIVSWNALISGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACAD 398
Query: 613 LSAVKEGREIHAQVI----KFDCFRD-DIVICNTLVDMYAKC 723
L+ + G + H V+ KF + DI + N+L+DMY KC
Sbjct: 399 LAELHLGMQAHVHVLKHGFKFQSGEEADIFVGNSLIDMYVKC 440
Score = 85.1 bits (209), Expect = 2e-14
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 31/160 (19%)
Frame = +1
Query: 337 IHASVSKSRFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITC------ 498
+HA + KS F ++ +I + L+D Y KCG + ++ FD + ERNV +WN+++T
Sbjct: 42 VHACILKSGFKNETFIQNRLIDAYGKCGSLDDGRQVFDEMPERNVYTWNSVLTALTKLGF 101
Query: 499 -------------------------YEQNGPASEALNVFSKMMNNGHDPDERSLASVVSA 603
+ Q+ EAL F M G +E S AS +SA
Sbjct: 102 LDEADSLFWLVPERDQCTWNSMVSGFAQHDRCEEALCYFGMMHKEGFVLNEYSFASGLSA 161
Query: 604 CATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAKC 723
C+ L+ + G +IH+ + K C D+ I + LVDMY+KC
Sbjct: 162 CSGLNDMNRGVQIHSLIAKSPCL-SDVYIGSALVDMYSKC 200
>ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297329643|gb|EFH60062.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 697
Score = 310 bits (795), Expect = 2e-82
Identities = 146/241 (60%), Positives = 185/241 (76%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
IDAY KCG L++ R++F KMP +N FTWNS+++ L+ G LDEA+ F MPE DQCTWN
Sbjct: 62 IDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWN 121
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
MVSGFAQ + +++L Y MH+E F+ N YT+ S LSACSGL D G QIH+ ++KS
Sbjct: 122 SMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKS 181
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
LSDVYIGSALVDMYSKCG+V AQ+ FD + +RNVVSWN+LITCYEQNGPA EAL VF
Sbjct: 182 PCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVF 241
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
M+ + +PDE +LASV+SACA+LSA+K G+E+HA+V+K D R+DI++ N VDMYAK
Sbjct: 242 QVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAK 301
Query: 721 C 723
C
Sbjct: 302 C 302
Score = 142 bits (359), Expect = 8e-32
Identities = 74/226 (32%), Positives = 120/226 (53%), Gaps = 6/226 (2%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y KC + AR +F MP +N SM+S +++ A F+ M E + +WN
Sbjct: 296 VDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWN 355
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
+++G+ Q +++L + RE YT+ + L AC+ L D +G Q H V K
Sbjct: 356 ALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKH 415
Query: 361 RFL------SDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPAS 522
F D+++G++L+DMY KCG V F + ER+ VSWN +I + QNG +
Sbjct: 416 GFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGN 475
Query: 523 EALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIK 660
EAL +F +M+++G PD ++ V+SAC V+EGR + + +
Sbjct: 476 EALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTR 521
Score = 125 bits (313), Expect = 2e-26
Identities = 84/282 (29%), Positives = 126/282 (44%), Gaps = 41/282 (14%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLM----PEPDQ 168
+D Y KCG +++A++VF +M D+N +WNS+I+ +G EA F +M EPD+
Sbjct: 194 VDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDE 253
Query: 169 CTWNLMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHAS 348
T S +SAC+ L K+G ++HA
Sbjct: 254 VT-----------------------------------LASVISACASLSAIKVGQEVHAR 278
Query: 349 VSK-SRFLSDVYIGSALVDMYSKCGDVVGAQKAFDG------------------------ 453
V K + +D+ + +A VDMY+KC + A+ FD
Sbjct: 279 VVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKA 338
Query: 454 -------ITERNVVSWNTLITCYEQNGPASEALNVFSKMMNNGHDPDERSLASVVSACAT 612
+ ERNVVSWN LI Y QNG EAL++F + P + A+++ ACA
Sbjct: 339 ARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACAD 398
Query: 613 LSAVKEGREIHAQVIKF-----DCFRDDIVICNTLVDMYAKC 723
L+ + G + H V+K DDI + N+L+DMY KC
Sbjct: 399 LADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKC 440
Score = 87.4 bits (215), Expect = 4e-15
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 31/160 (19%)
Frame = +1
Query: 337 IHASVSKSRFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLIT------- 495
+HASV KS F ++V+I + L+D Y+KCG + ++ FD + +RNV +WN+++T
Sbjct: 42 VHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGF 101
Query: 496 ----------------C--------YEQNGPASEALNVFSKMMNNGHDPDERSLASVVSA 603
C + Q+ EAL F+ M G +E + AS +SA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSA 161
Query: 604 CATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAKC 723
C+ L+ + G +IH+ + K C D+ I + LVDMY+KC
Sbjct: 162 CSGLNDMNRGVQIHSLIAKSPCL-SDVYIGSALVDMYSKC 200
>ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 705
Score = 310 bits (794), Expect = 3e-82
Identities = 145/241 (60%), Positives = 190/241 (78%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D YGKCG L++AR+VF M +NTF+WN+++ AL+ G LDEA + F MPE DQC+WN
Sbjct: 61 VDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWN 120
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
MVSGFAQ + +++L ++V MH EDF+ N Y++GSALSAC+GL D +G QIH ++KS
Sbjct: 121 AMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKS 180
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
R+ DVY+GSALVDMYSKC V AQ+AFD + RN+VSWN+LITCYEQNGPA +AL VF
Sbjct: 181 RYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVF 240
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
+MMN G +PDE +LASV SACA+LSA++EG +IHA+V+K D +R+D+V+ N LVDMYAK
Sbjct: 241 VRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAK 300
Query: 721 C 723
C
Sbjct: 301 C 301
Score = 150 bits (380), Expect = 3e-34
Identities = 77/218 (35%), Positives = 127/218 (58%), Gaps = 6/218 (2%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y KC ++ AR VF +MP ++ + SM+S + + + A FS M E + +WN
Sbjct: 295 VDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWN 354
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
+++G+ Q ++++ + + RE YT+G+ L+AC+ L D K+G Q H + K
Sbjct: 355 ALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKH 414
Query: 361 RFL------SDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPAS 522
F SD+++G++L+DMY KCG V + F+ + ER+ VSWN +I Y QNG +
Sbjct: 415 GFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGT 474
Query: 523 EALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGR 636
EAL +F +M+ +G PD ++ V+SAC+ V+EGR
Sbjct: 475 EALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGR 512
Score = 115 bits (287), Expect = 2e-23
Identities = 83/278 (29%), Positives = 122/278 (43%), Gaps = 37/278 (13%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y KC + +A+ F M +N +WNS+I+
Sbjct: 193 VDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITC-------------------------- 226
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSK- 357
+ Q K+LE V+M + T S SAC+ L + G QIHA V K
Sbjct: 227 -----YEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKH 281
Query: 358 SRFLSDVYIGSALVDMYSKCGDVVGAQKAFD----------------------------- 450
++ +D+ +G+ALVDMY+KC V A+ FD
Sbjct: 282 DKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLM 341
Query: 451 --GITERNVVSWNTLITCYEQNGPASEALNVFSKMMNNGHDPDERSLASVVSACATLSAV 624
+ ERNVVSWN LI Y QNG EA+ +F + P + ++++ACA L+ +
Sbjct: 342 FSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADL 401
Query: 625 KEGREIHAQVIK----FDCFRD-DIVICNTLVDMYAKC 723
K GR+ H ++K F D DI + N+L+DMY KC
Sbjct: 402 KLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKC 439
Score = 81.6 bits (200), Expect = 2e-13
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 31/160 (19%)
Frame = +1
Query: 337 IHASVSKSRFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGP 516
+HA + K++F S+++I + LVD+Y KCG + A+K FD + +RN SWN ++ + G
Sbjct: 41 VHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGA 100
Query: 517 ASEALNVFSKM----------MNNG-----------------HDPD----ERSLASVVSA 603
EALN+F M M +G H D E S S +SA
Sbjct: 101 LDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSA 160
Query: 604 CATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAKC 723
CA L + G +IH + K + D+ + + LVDMY+KC
Sbjct: 161 CAGLMDLSIGVQIHGLIAK-SRYSLDVYMGSALVDMYSKC 199
>ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g13600 gi|4558664|gb|AAD22682.1| hypothetical protein
[Arabidopsis thaliana] gi|330251150|gb|AEC06244.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 697
Score = 307 bits (787), Expect = 2e-81
Identities = 143/241 (59%), Positives = 186/241 (77%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
IDAY KCG L++ R+VF KMP +N +TWNS+++ L+ G LDEA+ F MPE DQCTWN
Sbjct: 62 IDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWN 121
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
MVSGFAQ + +++L Y MH+E F+ N Y++ S LSACSGL D G Q+H+ ++KS
Sbjct: 122 SMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKS 181
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
FLSDVYIGSALVDMYSKCG+V AQ+ FD + +RNVVSWN+LITC+EQNGPA EAL+VF
Sbjct: 182 PFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVF 241
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
M+ + +PDE +LASV+SACA+LSA+K G+E+H +V+K D R+DI++ N VDMYAK
Sbjct: 242 QMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAK 301
Query: 721 C 723
C
Sbjct: 302 C 302
Score = 139 bits (351), Expect = 7e-31
Identities = 73/226 (32%), Positives = 119/226 (52%), Gaps = 6/226 (2%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y KC + AR +F MP +N SMIS +++ A F+ M E + +WN
Sbjct: 296 VDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWN 355
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
+++G+ Q +++L + RE Y++ + L AC+ L + +G Q H V K
Sbjct: 356 ALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKH 415
Query: 361 RFL------SDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPAS 522
F D+++G++L+DMY KCG V F + ER+ VSWN +I + QNG +
Sbjct: 416 GFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGN 475
Query: 523 EALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIK 660
EAL +F +M+ +G PD ++ V+SAC V+EGR + + +
Sbjct: 476 EALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTR 521
Score = 128 bits (321), Expect = 2e-27
Identities = 85/282 (30%), Positives = 126/282 (44%), Gaps = 41/282 (14%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLM----PEPDQ 168
+D Y KCG +++A+ VF +M D+N +WNS+I+ +G EA D F +M EPD+
Sbjct: 194 VDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDE 253
Query: 169 CTWNLMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHAS 348
T S +SAC+ L K+G ++H
Sbjct: 254 VT-----------------------------------LASVISACASLSAIKVGQEVHGR 278
Query: 349 VSKS-RFLSDVYIGSALVDMYSKCGDVVGAQKAFDG------------------------ 453
V K+ + +D+ + +A VDMY+KC + A+ FD
Sbjct: 279 VVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKA 338
Query: 454 -------ITERNVVSWNTLITCYEQNGPASEALNVFSKMMNNGHDPDERSLASVVSACAT 612
+ ERNVVSWN LI Y QNG EAL++F + P S A+++ ACA
Sbjct: 339 ARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACAD 398
Query: 613 LSAVKEGREIHAQVIKF-----DCFRDDIVICNTLVDMYAKC 723
L+ + G + H V+K DDI + N+L+DMY KC
Sbjct: 399 LAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKC 440
Score = 89.7 bits (221), Expect = 8e-16
Identities = 52/160 (32%), Positives = 85/160 (53%), Gaps = 31/160 (19%)
Frame = +1
Query: 337 IHASVSKSRFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLIT------- 495
+HASV KS F ++++I + L+D YSKCG + ++ FD + +RN+ +WN+++T
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 496 ----------------C--------YEQNGPASEALNVFSKMMNNGHDPDERSLASVVSA 603
C + Q+ EAL F+ M G +E S ASV+SA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 604 CATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAKC 723
C+ L+ + +G ++H+ + K F D+ I + LVDMY+KC
Sbjct: 162 CSGLNDMNKGVQVHSLIAK-SPFLSDVYIGSALVDMYSKC 200
>ref|XP_006409682.1| hypothetical protein EUTSA_v10022582mg [Eutrema salsugineum]
gi|557110844|gb|ESQ51135.1| hypothetical protein
EUTSA_v10022582mg [Eutrema salsugineum]
Length = 687
Score = 305 bits (780), Expect = 1e-80
Identities = 145/241 (60%), Positives = 184/241 (76%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
IDAY KCG L++ R+VF KMPD+N +TWNS+++AL+ GLLDEA+ F MPE DQCTWN
Sbjct: 62 IDAYAKCGSLEDGRKVFDKMPDRNVYTWNSLVTALAKLGLLDEADSLFMSMPERDQCTWN 121
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
MVSGFAQ + +++L Y MH+E F+ N YT+ S LSACS L D G QIH+ V+KS
Sbjct: 122 SMVSGFAQHDRCEEALNYFALMHKEGFVLNEYTFASGLSACSSLNDMNRGIQIHSLVAKS 181
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
LSDV+IGSALVDMYSKCG+V AQ+ FD + +RNVV+WN+LITCYEQNGPA+EAL VF
Sbjct: 182 PRLSDVHIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVTWNSLITCYEQNGPAAEALKVF 241
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
M+ +PDE +LASV+SACA+LS +K G+E+H +V K D R+DI++ N VDMYAK
Sbjct: 242 HVMLRASVEPDEITLASVISACASLSDIKAGQEVHGRVAKNDKLRNDIILSNAFVDMYAK 301
Query: 721 C 723
C
Sbjct: 302 C 302
Score = 146 bits (368), Expect = 8e-33
Identities = 76/226 (33%), Positives = 121/226 (53%), Gaps = 6/226 (2%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y KCG + AR +F MP +N SMIS +++ A F+ M E + +WN
Sbjct: 296 VDMYAKCGMIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMTERNIVSWN 355
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
++SG+ Q +++L + RE YT+ + L AC+ L + +G Q H V K
Sbjct: 356 ALISGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLAELHLGMQAHVHVLKH 415
Query: 361 RFL------SDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPAS 522
F +D+++G++L+DMY KCG V F + ER+ VSWN +I + QNG +
Sbjct: 416 GFKFQSGEEADIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGN 475
Query: 523 EALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIK 660
EAL +F KM+++G PD ++ V+SAC V EG+ + + +
Sbjct: 476 EALELFRKMLDSGEQPDHITMIGVLSACGHAGLVDEGKHYFSSMTR 521
Score = 119 bits (298), Expect = 1e-24
Identities = 74/250 (29%), Positives = 124/250 (49%), Gaps = 37/250 (14%)
Frame = +1
Query: 85 NSMISALSVSGLLDEAEDCFSLMPEPDQCTWNLMVSGFAQAEFLDKSLEYLVKMHREDFM 264
++++ S G +++A+ F M + + TWN +++ + Q ++L+ M R
Sbjct: 191 SALVDMYSKCGNVNDAQQVFDEMGDRNVVTWNSLITCYEQNGPAAEALKVFHVMLRASVE 250
Query: 265 FNAYTYGSALSACSGLQDWKMGTQIHASVSKS-RFLSDVYIGSALVDMYSKCGDVVGAQK 441
+ T S +SAC+ L D K G ++H V+K+ + +D+ + +A VDMY+KCG + A+
Sbjct: 251 PDEITLASVISACASLSDIKAGQEVHGRVAKNDKLRNDIILSNAFVDMYAKCGMIKEARF 310
Query: 442 AFDG-------------------------------ITERNVVSWNTLITCYEQNGPASEA 528
FD +TERN+VSWN LI+ Y QNG EA
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMTERNIVSWNALISGYTQNGENEEA 370
Query: 529 LNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVI----KFDCFRD-DIVIC 693
L++F + P + A+++ ACA L+ + G + H V+ KF + DI +
Sbjct: 371 LSLFCLLKRESVCPTHYTFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEADIFVG 430
Query: 694 NTLVDMYAKC 723
N+L+DMY KC
Sbjct: 431 NSLIDMYVKC 440
Score = 92.0 bits (227), Expect = 2e-16
Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 31/160 (19%)
Frame = +1
Query: 337 IHASVSKSRFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITC------ 498
+HAS+ KS F ++VYI + L+D Y+KCG + +K FD + +RNV +WN+L+T
Sbjct: 42 VHASIIKSPFFNEVYIQNRLIDAYAKCGSLEDGRKVFDKMPDRNVYTWNSLVTALAKLGL 101
Query: 499 -------------------------YEQNGPASEALNVFSKMMNNGHDPDERSLASVVSA 603
+ Q+ EALN F+ M G +E + AS +SA
Sbjct: 102 LDEADSLFMSMPERDQCTWNSMVSGFAQHDRCEEALNYFALMHKEGFVLNEYTFASGLSA 161
Query: 604 CATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAKC 723
C++L+ + G +IH+ V K D+ I + LVDMY+KC
Sbjct: 162 CSSLNDMNRGIQIHSLVAKSPRL-SDVHIGSALVDMYSKC 200
>ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 305 bits (780), Expect = 1e-80
Identities = 143/241 (59%), Positives = 188/241 (78%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
ID YGKCGC+D AR++F +M ++N F+WNS+I A + SG LD+A F MP+ DQC+WN
Sbjct: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
M+SGF Q D++L Y +MH F+ N Y++GSALSAC+GLQD K+G+QIH+ V +S
Sbjct: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
+LSDVY+GSALVDMYSKCG V AQ FD +T R+ VSWN+LITCYEQNGP EAL +F
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
+M+ G +PDE +LASVVSACAT+SA+KEG++IHA+V+K D FR+D+++ N L+DMYAK
Sbjct: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
Query: 721 C 723
C
Sbjct: 301 C 301
Score = 145 bits (366), Expect = 1e-32
Identities = 77/218 (35%), Positives = 121/218 (55%), Gaps = 6/218 (2%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y KC ++ AR +F MP ++ + SM+S + + + A FS M D TWN
Sbjct: 295 LDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWN 354
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
+++G Q +++L + RE YT+G+ L+AC+ L D ++G Q H+ V K
Sbjct: 355 ALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKH 414
Query: 361 RFL------SDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPAS 522
F SDV++G++L+DMY KCG V + F + E++ VSWN +I Y QNG +
Sbjct: 415 GFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGN 474
Query: 523 EALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGR 636
+AL VF KM+ +G PD ++ V+ AC+ + EGR
Sbjct: 475 KALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGR 512
Score = 107 bits (267), Expect = 4e-21
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 38/256 (14%)
Frame = +1
Query: 70 NTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWNLMVSGFAQAEFLDKSLEYLVKMH 249
+ + ++++ S G ++ A+ F M + +WN +++ + Q +D++L+ V+M
Sbjct: 185 DVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMI 244
Query: 250 REDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSK-SRFLSDVYIGSALVDMYSKCGDV 426
+ + T S +SAC+ + K G QIHA V K F +D+ +G+AL+DMY+KC +
Sbjct: 245 KCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRI 304
Query: 427 VGAQKAFDGITERNVVS-------------------------------WNTLITCYEQNG 513
A+ FD + R+VVS WN LI QNG
Sbjct: 305 NEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNG 364
Query: 514 PASEALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFR------ 675
EAL +F + P + ++++ACA L+ ++ GR+ H+ V+K FR
Sbjct: 365 ENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHG-FRFQYGED 423
Query: 676 DDIVICNTLVDMYAKC 723
D+ + N+L+DMY KC
Sbjct: 424 SDVFVGNSLIDMYMKC 439
Score = 99.4 bits (246), Expect = 1e-18
Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 32/195 (16%)
Frame = +1
Query: 235 LVKMHREDFMF-NAYTYGSALSACSGLQDWKMGTQIHASVSKSRFLSDVYIGSALVDMYS 411
LVK + D +F ++ + L+ C+ + + +++HA + KS F S+ +I + L+D+Y
Sbjct: 6 LVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYG 65
Query: 412 KCGDVVGAQKAFDGITERNVVSWNTLITC------------------------------- 498
KCG V A+K FD + ERN+ SWN++I
Sbjct: 66 KCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISG 125
Query: 499 YEQNGPASEALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRD 678
+EQ+G EAL F++M +G +E S S +SACA L +K G +IH+ V + + +
Sbjct: 126 FEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSN-YLS 184
Query: 679 DIVICNTLVDMYAKC 723
D+ + + LVDMY+KC
Sbjct: 185 DVYMGSALVDMYSKC 199
>ref|XP_002310520.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222853423|gb|EEE90970.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 710
Score = 300 bits (768), Expect = 3e-79
Identities = 142/241 (58%), Positives = 187/241 (77%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
ID YGKCG LD AR+VF +M ++N F++NS+IS L G +DE+ FSLMPE DQC+WN
Sbjct: 66 IDVYGKCGYLDYARKVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWN 125
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
M++GFAQ + +++L++ V+MHR+DF+ N Y++GS LSACS L+D K+G QIH +SKS
Sbjct: 126 SMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKS 185
Query: 361 RFLSDVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPASEALNVF 540
++ DV++GS L+D YSKCG V A++ FDG+ E+NVVSWN LITCYEQNGPA EAL F
Sbjct: 186 KYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAF 245
Query: 541 SKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLVDMYAK 720
+M G PDE +LASVVSACATL+A KEG +IHA+V+K D FR+D+++ N LVDMYAK
Sbjct: 246 GRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAK 305
Query: 721 C 723
C
Sbjct: 306 C 306
Score = 151 bits (381), Expect = 2e-34
Identities = 78/226 (34%), Positives = 128/226 (56%), Gaps = 6/226 (2%)
Frame = +1
Query: 1 IDAYGKCGCLDNAREVFGKMPDKNTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWN 180
+D Y KCG ++ AR VF +MP +N + +M+S + S + A F+ + + D +WN
Sbjct: 300 VDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWN 359
Query: 181 LMVSGFAQAEFLDKSLEYLVKMHREDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS 360
+++G+ Q +++L + RE YT+G+ L+A + L D ++G Q H+ V K
Sbjct: 360 ALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKH 419
Query: 361 --RFLS----DVYIGSALVDMYSKCGDVVGAQKAFDGITERNVVSWNTLITCYEQNGPAS 522
RF S D+++G++L+DMY KCG V + F+ + E++ VSWNT+I Y QNG
Sbjct: 420 GFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGM 479
Query: 523 EALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIK 660
EAL +F KM+ +G PD ++ + AC+ V+EGR + K
Sbjct: 480 EALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTK 525
Score = 120 bits (300), Expect = 6e-25
Identities = 83/256 (32%), Positives = 125/256 (48%), Gaps = 38/256 (14%)
Frame = +1
Query: 70 NTFTWNSMISALSVSGLLDEAEDCFSLMPEPDQCTWNLMVSGFAQAEFLDKSLEYLVKMH 249
+ F + +I S GL+ A F M E + +WN +++ + Q ++LE +M
Sbjct: 190 DVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMT 249
Query: 250 REDFMFNAYTYGSALSACSGLQDWKMGTQIHASVSKS-RFLSDVYIGSALVDMYSKCGDV 426
F + T S +SAC+ L +K G QIHA V KS +F +D+ +G+ALVDMY+KCG V
Sbjct: 250 ELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRV 309
Query: 427 VGAQKAFDGITERN-------------------------------VVSWNTLITCYEQNG 513
A+ FD + RN +VSWN LI Y QNG
Sbjct: 310 NEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNG 369
Query: 514 PASEALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFR------ 675
EAL +F + P + ++++A A L+ ++ GR+ H+ V+K FR
Sbjct: 370 ENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHG-FRFQSGEE 428
Query: 676 DDIVICNTLVDMYAKC 723
DI + N+L+DMY KC
Sbjct: 429 PDIFVGNSLIDMYMKC 444
Score = 76.3 bits (186), Expect = 1e-11
Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Frame = +1
Query: 259 FMFNAYTYGSALSACSGLQDWKMGTQIHASVSKSRFLSDVYIGSALVDMYSKCGDVVGAQ 438
F ++ + L C L+ + +H + ++ F +V+I + L+D+Y KCG + A+
Sbjct: 20 FFTDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYAR 79
Query: 439 KAFDGITERNV-------------------------------VSWNTLITCYEQNGPASE 525
K FD ++ERNV SWN++I + Q+ E
Sbjct: 80 KVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEE 139
Query: 526 ALNVFSKMMNNGHDPDERSLASVVSACATLSAVKEGREIHAQVIKFDCFRDDIVICNTLV 705
AL+ F +M + ++ S S +SAC+ L +K G +IH + K + D+ + + L+
Sbjct: 140 ALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISK-SKYSLDVFMGSGLI 198
Query: 706 DMYAKC 723
D Y+KC
Sbjct: 199 DFYSKC 204