BLASTX nr result

ID: Rauwolfia21_contig00024112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00024112
         (598 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277537.1| PREDICTED: protein TRANSPARENT TESTA 1 [Viti...    77   3e-12
gb|EOY09368.1| C2H2-type zinc finger family protein [Theobroma c...    73   7e-11
emb|CBI29881.3| unnamed protein product [Vitis vinifera]               64   3e-08
gb|EOX96700.1| TRANSPARENT TESTA 1 protein, putative [Theobroma ...    61   2e-07
ref|XP_002304767.2| hypothetical protein POPTR_0003s20400g [Popu...    59   1e-06
emb|CBI16404.3| unnamed protein product [Vitis vinifera]               57   4e-06
ref|XP_002282950.1| PREDICTED: protein TRANSPARENT TESTA 1 [Viti...    57   4e-06

>ref|XP_002277537.1| PREDICTED: protein TRANSPARENT TESTA 1 [Vitis vinifera]
          Length = 345

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 60/178 (33%), Positives = 80/178 (44%), Gaps = 9/178 (5%)
 Frame = +2

Query: 92  MTDPYSNFYNNCFKFNSCLCPFSSSNTSLHH---RHHPN--PFLQNLHSDTCINFSTRAS 256
           MTDPYS F+   FKFN            LHH      P+  P+  +L++++  + S    
Sbjct: 1   MTDPYSKFFAGWFKFNP-----------LHHFPSAEPPSQPPYGHSLYTNSFSSHSNSII 49

Query: 257 FQXXXXXXXXXXXXXXXXXXXXXTRHEE--REPFCSANDQMDAEIFKAKEERQ--SLASG 424
           +Q                     TRHEE  ++   S +  MD +  K  +E    S ++ 
Sbjct: 50  YQTPPPSPPLREALPLLSLSP--TRHEEDQQQQHSSCSSAMDVDRKKKAKEESFFSSSTN 107

Query: 425 KRTIVEAAAADESVTVALHIGPPNPXXXXXXXXXXXXXETTDKDEDADVSGYPINRLN 598
             T  +    DE+VTVALHIG P+P             E TDKD D DVSGYPINRLN
Sbjct: 108 TNTATDDGDDDETVTVALHIGLPSPSAAEMASMLSSSSEITDKDGDGDVSGYPINRLN 165


>gb|EOY09368.1| C2H2-type zinc finger family protein [Theobroma cacao]
          Length = 361

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 62/188 (32%), Positives = 77/188 (40%), Gaps = 22/188 (11%)
 Frame = +2

Query: 101 PYSNFYNNCFKFNSCLCPFSSSNTSLHHRHHPNP-------FLQNLHSDTCINFSTRAS- 256
           PYSNF++  FKFN            L H   PNP       + QN    +   F T  + 
Sbjct: 5   PYSNFFSGWFKFNP-----------LQHYPPPNPPPQQPSSYTQNYFYSSNTTFMTNETN 53

Query: 257 ----FQXXXXXXXXXXXXXXXXXXXXX-TRHEEREPFCSANDQ--------MDAEIFKAK 397
               +Q                      TRH++ E      DQ        MD +  K K
Sbjct: 54  PFFHYQTSSSSPPSPPVREALPLLSLSPTRHDKDEEVQDDEDQDQEHSCTAMDVDKSKGK 113

Query: 398 EERQSLASGKRTIVEAAAA-DESVTVALHIGPPNPXXXXXXXXXXXXXETTDKDEDADVS 574
           EE + L +       A+AA DE+VTVALHIG P+P             E TDKD D D S
Sbjct: 114 EEGRLLFTNSAGGASASAAEDETVTVALHIGLPSPSASELASVLSSSSEITDKDGDGDDS 173

Query: 575 GYPINRLN 598
           GYP+NRLN
Sbjct: 174 GYPVNRLN 181


>emb|CBI29881.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 55/174 (31%), Positives = 71/174 (40%), Gaps = 5/174 (2%)
 Frame = +2

Query: 92  MTDPYSNFYNNCFKFNSCLCPFSSSNTSLHH---RHHPN--PFLQNLHSDTCINFSTRAS 256
           MTDPYS F+   FKFN            LHH      P+  P+  +L++++  + S    
Sbjct: 1   MTDPYSKFFAGWFKFNP-----------LHHFPSAEPPSQPPYGHSLYTNSFSSHSNSII 49

Query: 257 FQXXXXXXXXXXXXXXXXXXXXXTRHEEREPFCSANDQMDAEIFKAKEERQSLASGKRTI 436
           +Q                     TRHEE +                 +++ S  S     
Sbjct: 50  YQTPPPSPPLREALPLLSLSP--TRHEEDQ-----------------QQQHSSCSND--- 87

Query: 437 VEAAAADESVTVALHIGPPNPXXXXXXXXXXXXXETTDKDEDADVSGYPINRLN 598
                 DE+VTVALHIG P+P             E TDKD D DVSGYPINRLN
Sbjct: 88  ------DETVTVALHIGLPSPSAAEMASMLSSSSEITDKDGDGDVSGYPINRLN 135


>gb|EOX96700.1| TRANSPARENT TESTA 1 protein, putative [Theobroma cacao]
          Length = 331

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 52/169 (30%), Positives = 69/169 (40%), Gaps = 2/169 (1%)
 Frame = +2

Query: 92  MTDPY-SNFYNNCFKFNSCLCPFSSSNTSLHHRHHPNPFLQNLHSDTCINFSTRASFQXX 268
           MTDP  SNF+N C  F     P +   TS    +HPNP  Q   S+  IN S+    Q  
Sbjct: 1   MTDPACSNFFNGCLNF----MPLNPHYTSFTTPNHPNPSSQAHTSNIIINKSSIQG-QST 55

Query: 269 XXXXXXXXXXXXXXXXXXXTRHEEREPFCSANDQMDAEIFKAKEERQSLASGKRTIVEAA 448
                              T  EE EP  S+             E     S + ++  + 
Sbjct: 56  YPSSPPRKEALPLINYLSPTGQEENEPSSSS------------VEEDKNMSKEESLFSST 103

Query: 449 AADESVTVALHIGPPNPXXXXXXXXXXXXXETTDKDEDAD-VSGYPINR 592
             DE+VTVALHIG P+P             + TDK E+   VSGYP+++
Sbjct: 104 VDDEAVTVALHIGLPSPSNSDLRFRVSPSADVTDKGENGSAVSGYPLSK 152


>ref|XP_002304767.2| hypothetical protein POPTR_0003s20400g [Populus trichocarpa]
           gi|550343623|gb|EEE79746.2| hypothetical protein
           POPTR_0003s20400g [Populus trichocarpa]
          Length = 336

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 6/169 (3%)
 Frame = +2

Query: 92  MTDPYSNFYNNCFKF---NSCLCPFSSSNTSLHHRHHPNPFLQN--LHSDTCINFSTRAS 256
           M DPYSN++N  + F   ++     SSSN SL+  +  N +  N  +H+ + I F   +S
Sbjct: 1   MADPYSNYFNGWYNFKLHHNLSASASSSNPSLYASYGCNTYSDNNTIHNSSFIQFCQSSS 60

Query: 257 FQXXXXXXXXXXXXXXXXXXXXXTRHE-EREPFCSANDQMDAEIFKAKEERQSLASGKRT 433
                                  TRHE ++E  CSA      E+ K KE  +SL  G   
Sbjct: 61  ------PPSPPLREALPLLSLSPTRHEHQQESSCSA-----MEVDKNKEREESLCDG--- 106

Query: 434 IVEAAAADESVTVALHIGPPNPXXXXXXXXXXXXXETTDKDEDADVSGY 580
                   E+VTVALH+G P+P              ++DK++    SGY
Sbjct: 107 --------ETVTVALHLGLPSPCSADLVSRLSSSEISSDKEDVTAASGY 147


>emb|CBI16404.3| unnamed protein product [Vitis vinifera]
          Length = 360

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 50/163 (30%), Positives = 69/163 (42%)
 Frame = +2

Query: 92  MTDPYSNFYNNCFKFNSCLCPFSSSNTSLHHRHHPNPFLQNLHSDTCINFSTRASFQXXX 271
           MTDPYSN+ N  F  N      SS ++S      P      L+ +   NF+T        
Sbjct: 1   MTDPYSNYSNGWFNLNPLYHISSSPSSSDQSLCSPRYDFNKLYYN---NFNTN---NYHY 54

Query: 272 XXXXXXXXXXXXXXXXXXTRHEEREPFCSANDQMDAEIFKAKEERQSLASGKRTIVEAAA 451
                             TR++E+E  C  N  M+ ++ K KEE         T + ++A
Sbjct: 55  SPPSPPLREALPLLSLGPTRYDEQESSC--NTAMEVDMNKGKEE---------TTLSSSA 103

Query: 452 ADESVTVALHIGPPNPXXXXXXXXXXXXXETTDKDEDADVSGY 580
            DE+VTVALH+G P+P             ET DK+E    SGY
Sbjct: 104 DDETVTVALHLGLPSP-SSTDLISRLSSSETEDKEEVTVASGY 145


>ref|XP_002282950.1| PREDICTED: protein TRANSPARENT TESTA 1 [Vitis vinifera]
          Length = 334

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 50/163 (30%), Positives = 69/163 (42%)
 Frame = +2

Query: 92  MTDPYSNFYNNCFKFNSCLCPFSSSNTSLHHRHHPNPFLQNLHSDTCINFSTRASFQXXX 271
           MTDPYSN+ N  F  N      SS ++S      P      L+ +   NF+T        
Sbjct: 1   MTDPYSNYSNGWFNLNPLYHISSSPSSSDQSLCSPRYDFNKLYYN---NFNTN---NYHY 54

Query: 272 XXXXXXXXXXXXXXXXXXTRHEEREPFCSANDQMDAEIFKAKEERQSLASGKRTIVEAAA 451
                             TR++E+E  C  N  M+ ++ K KEE         T + ++A
Sbjct: 55  SPPSPPLREALPLLSLGPTRYDEQESSC--NTAMEVDMNKGKEE---------TTLSSSA 103

Query: 452 ADESVTVALHIGPPNPXXXXXXXXXXXXXETTDKDEDADVSGY 580
            DE+VTVALH+G P+P             ET DK+E    SGY
Sbjct: 104 DDETVTVALHLGLPSP-SSTDLISRLSSSETEDKEEVTVASGY 145


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