BLASTX nr result
ID: Rauwolfia21_contig00024061
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00024061
(564 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002322150.1| 40S ribosomal protein S3 [Populus trichocarp... 88 2e-15
ref|XP_002281141.2| PREDICTED: 40S ribosomal protein S3-3-like [... 87 4e-15
ref|XP_003548260.1| PREDICTED: 40S ribosomal protein S3-3-like [... 86 6e-15
ref|XP_003548259.1| PREDICTED: 40S ribosomal protein S3-3 [Glyci... 86 6e-15
gb|ACU19000.1| unknown [Glycine max] 86 6e-15
ref|XP_002516123.1| 40S ribosomal protein S3, putative [Ricinus ... 86 6e-15
ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis... 86 6e-15
ref|XP_002318635.1| hypothetical protein POPTR_0012s07830g [Popu... 86 8e-15
gb|AFK38685.1| unknown [Lotus japonicus] 84 2e-14
emb|CAN71792.1| hypothetical protein VITISV_022106 [Vitis vinifera] 84 2e-14
ref|XP_002308530.1| 40S ribosomal protein S3 [Populus trichocarp... 84 3e-14
ref|XP_004497123.1| PREDICTED: 40S ribosomal protein S3-2-like i... 83 4e-14
ref|XP_004497122.1| PREDICTED: 40S ribosomal protein S3-2-like i... 83 4e-14
gb|ACU19393.1| unknown [Glycine max] 82 7e-14
ref|NP_001239621.1| uncharacterized protein LOC100808705 [Glycin... 82 7e-14
ref|XP_002275541.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis... 82 7e-14
ref|XP_003638273.1| 40S ribosomal protein S3 [Medicago truncatul... 82 1e-13
ref|XP_003589329.1| 40S ribosomal protein S3 [Medicago truncatul... 82 1e-13
gb|ACJ83904.1| unknown [Medicago truncatula] gi|388507820|gb|AFK... 82 1e-13
gb|ABK95963.1| unknown [Populus trichocarpa] 82 1e-13
>ref|XP_002322150.1| 40S ribosomal protein S3 [Populus trichocarpa]
gi|222869146|gb|EEF06277.1| 40S ribosomal protein S3
[Populus trichocarpa]
Length = 233
Score = 87.8 bits (216), Expect = 2e-15
Identities = 41/55 (74%), Positives = 45/55 (81%)
Frame = -1
Query: 564 QGVLGIKVNIILDWDPKGKVGPKTPLPDLVTIHTPKEEQDYSTSNLTPIIEVPAA 400
QGVLGIKV I+LDWDPKGKVGP TPLPDLVTIH PKEE++Y LT IE+P A
Sbjct: 179 QGVLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEEEEYVPPLLTTNIEIPVA 233
>ref|XP_002281141.2| PREDICTED: 40S ribosomal protein S3-3-like [Vitis vinifera]
gi|296081703|emb|CBI20708.3| unnamed protein product
[Vitis vinifera]
Length = 235
Score = 86.7 bits (213), Expect = 4e-15
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = -1
Query: 564 QGVLGIKVNIILDWDPKGKVGPKTPLPDLVTIHTPKEEQDYSTSNLTPIIEVP 406
QGVLGIKV I+LDWDPKGK GP TPLPDLVTIHTPKEE++Y LT IEVP
Sbjct: 179 QGVLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEEYVPPVLTTNIEVP 231
>ref|XP_003548260.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 235
Score = 85.9 bits (211), Expect = 6e-15
Identities = 42/57 (73%), Positives = 47/57 (82%), Gaps = 2/57 (3%)
Frame = -1
Query: 564 QGVLGIKVNIILDWDPKGKVGPKTPLPDLVTIHTPKEEQDYS--TSNLTPIIEVPAA 400
QGVLGIKV I+LDWDPKGK GPKTPLPDLVTIHTPKEE++Y+ + L IEVP A
Sbjct: 179 QGVLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYARPAAVLATDIEVPVA 235
>ref|XP_003548259.1| PREDICTED: 40S ribosomal protein S3-3 [Glycine max]
Length = 236
Score = 85.9 bits (211), Expect = 6e-15
Identities = 42/57 (73%), Positives = 47/57 (82%), Gaps = 2/57 (3%)
Frame = -1
Query: 564 QGVLGIKVNIILDWDPKGKVGPKTPLPDLVTIHTPKEEQDYS--TSNLTPIIEVPAA 400
QGVLGIKV I+LDWDPKGK GPKTPLPDLVTIHTPKEE++Y+ + L IEVP A
Sbjct: 179 QGVLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYARPAAVLATNIEVPVA 235
>gb|ACU19000.1| unknown [Glycine max]
Length = 236
Score = 85.9 bits (211), Expect = 6e-15
Identities = 42/57 (73%), Positives = 47/57 (82%), Gaps = 2/57 (3%)
Frame = -1
Query: 564 QGVLGIKVNIILDWDPKGKVGPKTPLPDLVTIHTPKEEQDYS--TSNLTPIIEVPAA 400
QGVLGIKV I+LDWDPKGK GPKTPLPDLVTIHTPKEE++Y+ + L IEVP A
Sbjct: 179 QGVLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYARPAAVLATNIEVPVA 235
>ref|XP_002516123.1| 40S ribosomal protein S3, putative [Ricinus communis]
gi|223544609|gb|EEF46125.1| 40S ribosomal protein S3,
putative [Ricinus communis]
Length = 234
Score = 85.9 bits (211), Expect = 6e-15
Identities = 40/56 (71%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
Frame = -1
Query: 564 QGVLGIKVNIILDWDPKGKVGPKTPLPDLVTIHTPKEEQDYST-SNLTPIIEVPAA 400
QGVLGIKV I+LDWDP+GK+GP TPLPDLVTIH+PKEE++Y+T + LT IE+P A
Sbjct: 179 QGVLGIKVKIMLDWDPRGKLGPMTPLPDLVTIHSPKEEEEYNTPAVLTANIEIPVA 234
>ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
gi|297738588|emb|CBI27833.3| unnamed protein product
[Vitis vinifera]
Length = 234
Score = 85.9 bits (211), Expect = 6e-15
Identities = 42/56 (75%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
Frame = -1
Query: 564 QGVLGIKVNIILDWDPKGKVGPKTPLPDLVTIHTPKEEQDY-STSNLTPIIEVPAA 400
QGVLGIKV I+LDWDPKGK GPKTPLPDLVTIHTPKEE++Y L IEVP A
Sbjct: 179 QGVLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYIRPEKLATDIEVPTA 234
>ref|XP_002318635.1| hypothetical protein POPTR_0012s07830g [Populus trichocarpa]
gi|222859308|gb|EEE96855.1| hypothetical protein
POPTR_0012s07830g [Populus trichocarpa]
Length = 178
Score = 85.5 bits (210), Expect = 8e-15
Identities = 39/55 (70%), Positives = 45/55 (81%)
Frame = -1
Query: 564 QGVLGIKVNIILDWDPKGKVGPKTPLPDLVTIHTPKEEQDYSTSNLTPIIEVPAA 400
+GVLGIKV I+LDWDPKGKVGP TPLPDLVTIH PKEE++Y +T IE+P A
Sbjct: 124 RGVLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEEEEYVPPVMTTNIEIPVA 178
>gb|AFK38685.1| unknown [Lotus japonicus]
Length = 78
Score = 84.3 bits (207), Expect = 2e-14
Identities = 41/56 (73%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
Frame = -1
Query: 564 QGVLGIKVNIILDWDPKGKVGPKTPLPDLVTIHTPKEEQDY-STSNLTPIIEVPAA 400
QGVLGIKV I+LDWDPKGK GPKTPLPD+VTIHTPKEE++Y + L IEVP A
Sbjct: 23 QGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYRPVAVLANDIEVPVA 78
>emb|CAN71792.1| hypothetical protein VITISV_022106 [Vitis vinifera]
Length = 252
Score = 84.3 bits (207), Expect = 2e-14
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = -1
Query: 564 QGVLGIKVNIILDWDPKGKVGPKTPLPDLVTIHTPKEEQDYSTSNLTPIIEVP 406
QGVLGIKV I+LDWDPKGK GP TPLPDLVTIH PKEE++Y LT IEVP
Sbjct: 196 QGVLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHXPKEEEEYVPPVLTTNIEVP 248
>ref|XP_002308530.1| 40S ribosomal protein S3 [Populus trichocarpa]
gi|118483836|gb|ABK93809.1| unknown [Populus
trichocarpa] gi|118485378|gb|ABK94546.1| unknown
[Populus trichocarpa] gi|222854506|gb|EEE92053.1| 40S
ribosomal protein S3 [Populus trichocarpa]
Length = 236
Score = 83.6 bits (205), Expect = 3e-14
Identities = 40/56 (71%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
Frame = -1
Query: 564 QGVLGIKVNIILDWDPKGKVGPKTPLPDLVTIHTPKEEQDY-STSNLTPIIEVPAA 400
QGVLGIKV I+LDWDPKGKVGP TPLPDLVTIH PKEE++Y + +T IE+P A
Sbjct: 179 QGVLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEEEEYVAPPVMTTNIEIPVA 234
>ref|XP_004497123.1| PREDICTED: 40S ribosomal protein S3-2-like isoform X2 [Cicer
arietinum]
Length = 234
Score = 83.2 bits (204), Expect = 4e-14
Identities = 41/63 (65%), Positives = 49/63 (77%), Gaps = 2/63 (3%)
Frame = -1
Query: 564 QGVLGIKVNIILDWDPKGKVGPKTPLPDLVTIHTPKEEQDYS--TSNLTPIIEVPAA*SI 391
QGVLGIKV I+LDWDPKGK GPKTPLPD+VTIH+PKEE +Y+ + L IEVPA +
Sbjct: 172 QGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHSPKEEDEYARPAAVLATDIEVPAPVPV 231
Query: 390 VLA 382
+A
Sbjct: 232 PIA 234
>ref|XP_004497122.1| PREDICTED: 40S ribosomal protein S3-2-like isoform X1 [Cicer
arietinum]
Length = 241
Score = 83.2 bits (204), Expect = 4e-14
Identities = 41/63 (65%), Positives = 49/63 (77%), Gaps = 2/63 (3%)
Frame = -1
Query: 564 QGVLGIKVNIILDWDPKGKVGPKTPLPDLVTIHTPKEEQDYS--TSNLTPIIEVPAA*SI 391
QGVLGIKV I+LDWDPKGK GPKTPLPD+VTIH+PKEE +Y+ + L IEVPA +
Sbjct: 179 QGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHSPKEEDEYARPAAVLATDIEVPAPVPV 238
Query: 390 VLA 382
+A
Sbjct: 239 PIA 241
>gb|ACU19393.1| unknown [Glycine max]
Length = 236
Score = 82.4 bits (202), Expect = 7e-14
Identities = 36/42 (85%), Positives = 40/42 (95%)
Frame = -1
Query: 564 QGVLGIKVNIILDWDPKGKVGPKTPLPDLVTIHTPKEEQDYS 439
QGVLGIKV I+LDWDPKGK GPKTPLPDLVTIHTPKEE++Y+
Sbjct: 179 QGVLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYN 220
>ref|NP_001239621.1| uncharacterized protein LOC100808705 [Glycine max]
gi|255641130|gb|ACU20843.1| unknown [Glycine max]
Length = 236
Score = 82.4 bits (202), Expect = 7e-14
Identities = 36/42 (85%), Positives = 40/42 (95%)
Frame = -1
Query: 564 QGVLGIKVNIILDWDPKGKVGPKTPLPDLVTIHTPKEEQDYS 439
QGVLGIKV I+LDWDPKGK GPKTPLPDLVTIHTPKEE++Y+
Sbjct: 179 QGVLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYN 220
>ref|XP_002275541.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
gi|297743020|emb|CBI35887.3| unnamed protein product
[Vitis vinifera]
Length = 234
Score = 82.4 bits (202), Expect = 7e-14
Identities = 41/56 (73%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
Frame = -1
Query: 564 QGVLGIKVNIILDWDPKGKVGPKTPLPDLVTIHTPKEEQDYSTSNLTPI-IEVPAA 400
QGVLGIKV I+LDWDPKGK GPKTPLPDLVTIHTPKEE++Y + IEV AA
Sbjct: 179 QGVLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYLRPPIPAADIEVAAA 234
>ref|XP_003638273.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355504208|gb|AES85411.1| 40S ribosomal protein S3
[Medicago truncatula]
Length = 239
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/61 (65%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
Frame = -1
Query: 564 QGVLGIKVNIILDWDPKGKVGPKTPLPDLVTIHTPKEEQDY--STSNLTPIIEVPAA*SI 391
QGVLGIKV I+LDWDPKGK GPKTPLPD+VTIHTPKEE++Y + + IEVP +
Sbjct: 179 QGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPVPIPV 238
Query: 390 V 388
V
Sbjct: 239 V 239
>ref|XP_003589329.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355478377|gb|AES59580.1| 40S ribosomal protein S3
[Medicago truncatula]
Length = 239
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/61 (65%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
Frame = -1
Query: 564 QGVLGIKVNIILDWDPKGKVGPKTPLPDLVTIHTPKEEQDY--STSNLTPIIEVPAA*SI 391
QGVLGIKV I+LDWDPKGK GPKTPLPD+VTIHTPKEE++Y + + IEVP +
Sbjct: 179 QGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPVPIPV 238
Query: 390 V 388
V
Sbjct: 239 V 239
>gb|ACJ83904.1| unknown [Medicago truncatula] gi|388507820|gb|AFK41976.1| unknown
[Medicago truncatula]
Length = 239
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/61 (65%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
Frame = -1
Query: 564 QGVLGIKVNIILDWDPKGKVGPKTPLPDLVTIHTPKEEQDY--STSNLTPIIEVPAA*SI 391
QGVLGIKV I+LDWDPKGK GPKTPLPD+VTIHTPKEE++Y + + IEVP +
Sbjct: 179 QGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPVPIPV 238
Query: 390 V 388
V
Sbjct: 239 V 239
>gb|ABK95963.1| unknown [Populus trichocarpa]
Length = 232
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/55 (72%), Positives = 44/55 (80%)
Frame = -1
Query: 564 QGVLGIKVNIILDWDPKGKVGPKTPLPDLVTIHTPKEEQDYSTSNLTPIIEVPAA 400
QGVLGIKV I+LDWDPKGKVGP TPLPDLVTIH PKEE +Y +T IE+P A
Sbjct: 179 QGVLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEE-EYVPPVMTTNIEIPVA 232