BLASTX nr result

ID: Rauwolfia21_contig00023918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00023918
         (430 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006465209.1| PREDICTED: nuclear pore complex protein Nup9...    60   4e-07
ref|XP_006427580.1| hypothetical protein CICLE_v10024784mg [Citr...    60   4e-07
gb|EMJ21482.1| hypothetical protein PRUPE_ppa000667mg [Prunus pe...    59   5e-07
gb|EOY26007.1| Suppressor of auxin resistance 3 [Theobroma cacao]      59   9e-07
ref|XP_002303836.1| PRECOCIOUS family protein [Populus trichocar...    59   9e-07
ref|XP_002527319.1| nucleoporin, putative [Ricinus communis] gi|...    58   2e-06
ref|XP_004140177.1| PREDICTED: nuclear pore complex protein Nup9...    57   2e-06
ref|XP_004301585.1| PREDICTED: nuclear pore complex protein Nup9...    57   3e-06
ref|XP_004235924.1| PREDICTED: nuclear pore complex protein Nup9...    55   1e-05

>ref|XP_006465209.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Citrus
            sinensis]
          Length = 1041

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = -1

Query: 430  CFSTIFKAPTPEDLQSCHLQDAVSLFTCYISEAAS 326
            CF T+F AP PED +S HLQDAVSLFTCY+SE AS
Sbjct: 1007 CFDTVFSAPIPEDFRSNHLQDAVSLFTCYLSEIAS 1041


>ref|XP_006427580.1| hypothetical protein CICLE_v10024784mg [Citrus clementina]
            gi|557529570|gb|ESR40820.1| hypothetical protein
            CICLE_v10024784mg [Citrus clementina]
          Length = 1041

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = -1

Query: 430  CFSTIFKAPTPEDLQSCHLQDAVSLFTCYISEAAS 326
            CF T+F AP PED +S HLQDAVSLFTCY+SE AS
Sbjct: 1007 CFDTVFSAPIPEDFRSNHLQDAVSLFTCYLSEIAS 1041


>gb|EMJ21482.1| hypothetical protein PRUPE_ppa000667mg [Prunus persica]
          Length = 1042

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 24/35 (68%), Positives = 31/35 (88%)
 Frame = -1

Query: 430  CFSTIFKAPTPEDLQSCHLQDAVSLFTCYISEAAS 326
            CF T+F+AP PEDL++ HLQDAVSLFTC++SE A+
Sbjct: 1008 CFDTVFRAPIPEDLRASHLQDAVSLFTCFLSEVAT 1042


>gb|EOY26007.1| Suppressor of auxin resistance 3 [Theobroma cacao]
          Length = 1069

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = -1

Query: 430  CFSTIFKAPTPEDLQSCHLQDAVSLFTCYISEAAS 326
            CF T+F AP PEDL+S HLQDAV+LFTC++SE AS
Sbjct: 1035 CFDTVFSAPIPEDLRSNHLQDAVTLFTCHLSEVAS 1069


>ref|XP_002303836.1| PRECOCIOUS family protein [Populus trichocarpa]
            gi|222841268|gb|EEE78815.1| PRECOCIOUS family protein
            [Populus trichocarpa]
          Length = 1067

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = -1

Query: 430  CFSTIFKAPTPEDLQSCHLQDAVSLFTCYISEAAS 326
            CF T+ +AP PEDL+S HLQDAVSLFTCY+SE A+
Sbjct: 1033 CFDTVLRAPIPEDLRSNHLQDAVSLFTCYLSEMAA 1067


>ref|XP_002527319.1| nucleoporin, putative [Ricinus communis] gi|223533319|gb|EEF35071.1|
            nucleoporin, putative [Ricinus communis]
          Length = 1067

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = -1

Query: 430  CFSTIFKAPTPEDLQSCHLQDAVSLFTCYISEAAS 326
            CF TIF AP PEDL+S +LQDAVSLFTCY+SE A+
Sbjct: 1033 CFDTIFGAPVPEDLRSNYLQDAVSLFTCYLSEMAA 1067


>ref|XP_004140177.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Cucumis
            sativus] gi|449481026|ref|XP_004156060.1| PREDICTED:
            nuclear pore complex protein Nup98-Nup96-like [Cucumis
            sativus]
          Length = 1073

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/35 (74%), Positives = 28/35 (80%)
 Frame = -1

Query: 430  CFSTIFKAPTPEDLQSCHLQDAVSLFTCYISEAAS 326
            CF TIF AP  EDL+S HLQDAVSLFTCY+SE  S
Sbjct: 1039 CFDTIFSAPMREDLRSSHLQDAVSLFTCYLSEITS 1073


>ref|XP_004301585.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Fragaria
            vesca subsp. vesca]
          Length = 1089

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = -1

Query: 430  CFSTIFKAPTPEDLQSCHLQDAVSLFTCYISEAAS 326
            CF T+F AP P+D++S HLQDAVSLFTC++SE A+
Sbjct: 1055 CFDTVFSAPIPQDVRSNHLQDAVSLFTCFLSEVAT 1089


>ref|XP_004235924.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Solanum
            lycopersicum]
          Length = 1012

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = -1

Query: 430  CFSTIFKAPTPEDLQSCHLQDAVSLFTCYISEAAS 326
            C+ TIFKAP PED ++ HLQDAVSLFT Y+SE +S
Sbjct: 978  CYDTIFKAPIPEDTRAYHLQDAVSLFTSYLSEVSS 1012


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