BLASTX nr result

ID: Rauwolfia21_contig00023861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00023861
         (737 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006369524.1| hypothetical protein POPTR_0001s24690g [Popu...    57   8e-06

>ref|XP_006369524.1| hypothetical protein POPTR_0001s24690g [Populus trichocarpa]
           gi|550348102|gb|ERP66093.1| hypothetical protein
           POPTR_0001s24690g [Populus trichocarpa]
          Length = 167

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
 Frame = -3

Query: 405 PGLQSTKHSGSVKETRGLPDGWITEEKVRKLGMSAGHKDKTYIEVITNKRCRSIPDVWRY 226
           P  +  + S +  +T  LP GW+ E++VR  G +AG +DK YIE ++ +R RS  DV  Y
Sbjct: 57  PVREKRRLSETAVDTSWLPPGWVVEDRVRTSGATAGTRDKYYIEPVSGRRFRSKKDVQYY 116

Query: 225 IE-----KQRKLQGEIEANKDEASCIP 160
           +E     K+ K+   ++A+ ++ + IP
Sbjct: 117 LETGTLKKRGKVAENVDADTNKQTKIP 143


Top