BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00023757
         (287 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    63   3e-08
ref|XP_006469117.1| PREDICTED: putative ribonuclease H protein A...    58   1e-06

>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 32/86 (37%), Positives = 41/86 (47%)
 Frame = -2

Query: 286 SPLCSICQRKQETSLHAVRDCTWCEEVWNLLVPQGKQNEFKAGNDPSTWTDLNLNKNFGF 107
           SP C  C R+ ET +H +RDC    +VW  L+P      F    D   W   NLNK  G 
Sbjct: 502 SPTCPCCAREDETVIHVLRDCVHSTQVWLRLIPHNYITNF-FSFDCREWVFNNLNKK-GI 559

Query: 106 SDGNIVWSLTFRETNNRVWHWRNQQM 29
            D    W  TF  T   +W+WRN+ +
Sbjct: 560 GDNPATWQTTFMTTCWYLWNWRNKSI 585


>ref|XP_006469117.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 491

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 31/85 (36%), Positives = 41/85 (48%)
 Frame = -2

Query: 277 CSICQRKQETSLHAVRDCTWCEEVWNLLVPQGKQNEFKAGNDPSTWTDLNLNKNFGFSDG 98
           C  C    ET+LH +RDC   + +WN L+P   +  F + N    W  LNL  N    +G
Sbjct: 317 CDHCGVASETTLHVLRDCFMAKRLWNQLLPSEWRQVFFSSN-LLDWLTLNLRSNQCMENG 375

Query: 97  NIVWSLTFRETNNRVWHWRNQQMHN 23
            + WS  F     R+W WRNQ   N
Sbjct: 376 -LEWSCMFGVAIWRLWFWRNQYQFN 399