BLASTX nr result

ID: Rauwolfia21_contig00023531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00023531
         (465 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34171.3| unnamed protein product [Vitis vinifera]               60   3e-07
ref|XP_002273945.1| PREDICTED: calcium-transporting ATPase 12, p...    60   3e-07
ref|XP_006375913.1| hypothetical protein POPTR_0013s05960g, part...    57   2e-06
ref|XP_006347758.1| PREDICTED: calcium-transporting ATPase 12, p...    57   3e-06
ref|XP_006375832.1| hypothetical protein POPTR_0013s03760g [Popu...    56   6e-06
ref|XP_004231233.1| PREDICTED: calcium-transporting ATPase 12, p...    56   6e-06
ref|XP_002336234.1| predicted protein [Populus trichocarpa]            56   6e-06

>emb|CBI34171.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/103 (33%), Positives = 62/103 (60%), Gaps = 12/103 (11%)
 Frame = +3

Query: 174 AKPCKRLQLVFRATYF---VIALSRKVNFGSAKILGPILQRTASYIALDV---------D 317
           AKP +R +L F A YF   + +L++K+   +  +LGP + R+ S+I++DV         D
Sbjct: 59  AKPYQRWRLAFIAIYFTKVLDSLTKKIFEKNIPLLGPAILRSPSFISVDVQDVLKSDSSD 118

Query: 318 HERFLDVDKNALVDLVKEKNNELLSQYGGTKKVAELLETR*KE 446
           H  F ++D+  L + V++K+ E L Q+GG K++  +L+T  K+
Sbjct: 119 HVPFFNIDQKMLTETVRDKDFERLHQFGGIKQLVAVLKTDEKD 161


>ref|XP_002273945.1| PREDICTED: calcium-transporting ATPase 12, plasma
           membrane-type-like [Vitis vinifera]
          Length = 1057

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/103 (33%), Positives = 62/103 (60%), Gaps = 12/103 (11%)
 Frame = +3

Query: 174 AKPCKRLQLVFRATYF---VIALSRKVNFGSAKILGPILQRTASYIALDV---------D 317
           AKP +R +L F A YF   + +L++K+   +  +LGP + R+ S+I++DV         D
Sbjct: 52  AKPYQRWRLAFIAIYFTKVLDSLTKKIFEKNIPLLGPAILRSPSFISVDVQDVLKSDSSD 111

Query: 318 HERFLDVDKNALVDLVKEKNNELLSQYGGTKKVAELLETR*KE 446
           H  F ++D+  L + V++K+ E L Q+GG K++  +L+T  K+
Sbjct: 112 HVPFFNIDQKMLTETVRDKDFERLHQFGGIKQLVAVLKTDEKD 154


>ref|XP_006375913.1| hypothetical protein POPTR_0013s05960g, partial [Populus
           trichocarpa] gi|550325064|gb|ERP53710.1| hypothetical
           protein POPTR_0013s05960g, partial [Populus trichocarpa]
          Length = 888

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 12/99 (12%)
 Frame = +3

Query: 186 KRLQLVFRATYF---VIALSRKVNFGSAKILGPILQRTASYIALDVDHERF--------- 329
           KR ++ + A YF   +++LS+K      KIL     R+ SY+A+DV  + F         
Sbjct: 28  KRWRIAYTAIYFTRLLVSLSKKALVSQTKIL-----RSLSYVAVDVHDDTFQHENKLFSL 82

Query: 330 LDVDKNALVDLVKEKNNELLSQYGGTKKVAELLETR*KE 446
           ++VD+  L D++KEKN E L+Q GG  +VA +LET  K+
Sbjct: 83  INVDQRTLNDIIKEKNLESLNQLGGVIQVATILETDVKD 121


>ref|XP_006347758.1| PREDICTED: calcium-transporting ATPase 12, plasma
           membrane-type-like [Solanum tuberosum]
          Length = 1043

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 41/96 (42%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
 Frame = +3

Query: 177 KPCKRLQLVFRATYFVIALSRKVNFGSAKILGPILQRTASYIALDV----DHER--FLDV 338
           KP KRLQLVFRA YFV  L++K    +  +L  ++ R  SYI +D+    DHE+  F  +
Sbjct: 62  KPHKRLQLVFRAIYFVAFLNKKRIDRNTLVLSQLV-RDPSYI-IDIESINDHEKQLFHGI 119

Query: 339 DKNALVDLVKEKNNELLSQYGGTKKVAELLETR*KE 446
           +K AL  LV+EK+   L Q+GG  +V  +L +  KE
Sbjct: 120 NKEALAKLVREKDFNGLLQFGGVLQVVVILGSDQKE 155


>ref|XP_006375832.1| hypothetical protein POPTR_0013s03760g [Populus trichocarpa]
           gi|550324887|gb|ERP53629.1| hypothetical protein
           POPTR_0013s03760g [Populus trichocarpa]
          Length = 1013

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 12/99 (12%)
 Frame = +3

Query: 186 KRLQLVFRATYF---VIALSRKVNFGSAKILGPILQRTASYIALDVDHERF--------- 329
           +R ++ + A YF   +++LS+K      KIL     R+ SY+A+DV  + F         
Sbjct: 28  RRWRIAYTAIYFTRLLVSLSKKALVSQTKIL-----RSLSYVAVDVHDDTFQHENKLVSL 82

Query: 330 LDVDKNALVDLVKEKNNELLSQYGGTKKVAELLETR*KE 446
           ++VD+  L D++KEKN E L+Q GG  +VA +LET  K+
Sbjct: 83  VNVDQRTLNDIIKEKNLESLNQLGGVIQVATILETDVKD 121


>ref|XP_004231233.1| PREDICTED: calcium-transporting ATPase 12, plasma
           membrane-type-like [Solanum lycopersicum]
          Length = 1001

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
 Frame = +3

Query: 132 KTSTMIVSFSHSGHA---KPCKRLQLVFRATYFVIALSRKVNFGSAKILGPILQRTASYI 302
           K S  I+S S+   +   KP KRLQLVFRA YFV  L++K    +  +L  ++   +  I
Sbjct: 7   KHSDTIMSLSNERDSYLGKPHKRLQLVFRAIYFVAVLNKKRTDRNTLVLSQLVCDPSYII 66

Query: 303 ALDV--DHER--FLDVDKNALVDLVKEKNNELLSQYGGTKKVAELLETR*KE 446
            ++   +HE+  F  ++K AL  LV+EK+   L Q+GG  +V  LL +  KE
Sbjct: 67  DIESINNHEKQLFNGINKEALAKLVREKDFNGLLQFGGVLQVVVLLGSDQKE 118


>ref|XP_002336234.1| predicted protein [Populus trichocarpa]
          Length = 138

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 12/99 (12%)
 Frame = +3

Query: 186 KRLQLVFRATYF---VIALSRKVNFGSAKILGPILQRTASYIALDVDHERF--------- 329
           +R ++ + A YF   +++LS+K      KIL     R+ SY+A+DV  + F         
Sbjct: 28  RRWRIAYTAIYFTRLLVSLSKKALVSQTKIL-----RSLSYVAVDVHDDTFQHENKLVSL 82

Query: 330 LDVDKNALVDLVKEKNNELLSQYGGTKKVAELLETR*KE 446
           ++VD+  L D++KEKN E L+Q GG  +VA +LET  K+
Sbjct: 83  VNVDQRTLNDIIKEKNLESLNQLGGVIQVATILETDVKD 121


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