BLASTX nr result
ID: Rauwolfia21_contig00023108
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00023108
(259 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB95840.1| hypothetical protein L484_010039 [Morus notabilis] 134 2e-29
ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247... 132 6e-29
ref|XP_002516789.1| conserved hypothetical protein [Ricinus comm... 130 2e-28
ref|XP_006419799.1| hypothetical protein CICLE_v10006738mg [Citr... 128 7e-28
ref|XP_004298175.1| PREDICTED: mediator of RNA polymerase II tra... 127 2e-27
ref|XP_004165440.1| PREDICTED: mediator of RNA polymerase II tra... 124 1e-26
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216... 124 1e-26
gb|EMJ26654.1| hypothetical protein PRUPE_ppa000298mg [Prunus pe... 124 2e-26
ref|XP_004158628.1| PREDICTED: mediator of RNA polymerase II tra... 123 2e-26
ref|XP_004140216.1| PREDICTED: mediator of RNA polymerase II tra... 123 2e-26
ref|XP_004229451.1| PREDICTED: mediator of RNA polymerase II tra... 122 4e-26
gb|EMJ00881.1| hypothetical protein PRUPE_ppa000301mg [Prunus pe... 122 5e-26
ref|XP_006339413.1| PREDICTED: mediator of RNA polymerase II tra... 122 7e-26
ref|XP_004290677.1| PREDICTED: mediator of RNA polymerase II tra... 122 7e-26
ref|XP_004247142.1| PREDICTED: mediator of RNA polymerase II tra... 121 9e-26
ref|XP_006355878.1| PREDICTED: mediator of RNA polymerase II tra... 121 1e-25
gb|EMJ28469.1| hypothetical protein PRUPE_ppa017778mg [Prunus pe... 120 1e-25
ref|XP_002271735.2| PREDICTED: uncharacterized protein LOC100254... 119 3e-25
emb|CBI32346.3| unnamed protein product [Vitis vinifera] 119 3e-25
ref|XP_002311827.1| hypothetical protein POPTR_0008s20610g [Popu... 119 4e-25
>gb|EXB95840.1| hypothetical protein L484_010039 [Morus notabilis]
Length = 1285
Score = 134 bits (336), Expect = 2e-29
Identities = 64/85 (75%), Positives = 73/85 (85%)
Frame = -2
Query: 255 SLWDGILELTKWAQENGSDPLLWAIQVSSNLNAAGVSLPSFELGDLLISYICWENNVPIA 76
S+WD +LELTK AQ+ GSDPL+WAIQ+SSNLN+ GVSLPS E+ + L+SYICWENNVPI
Sbjct: 8 SVWDSVLELTKVAQQKGSDPLVWAIQLSSNLNSMGVSLPSVEVANALVSYICWENNVPIV 67
Query: 75 WKFLAKALVCKIVPPLPVLALLSIR 1
WKFL KALV KIVPPL VLALLS R
Sbjct: 68 WKFLEKALVFKIVPPLLVLALLSSR 92
>ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247741 [Vitis vinifera]
gi|297736973|emb|CBI26174.3| unnamed protein product
[Vitis vinifera]
Length = 1305
Score = 132 bits (331), Expect = 6e-29
Identities = 62/86 (72%), Positives = 75/86 (87%)
Frame = -2
Query: 258 SSLWDGILELTKWAQENGSDPLLWAIQVSSNLNAAGVSLPSFELGDLLISYICWENNVPI 79
+S+WD ILE T AQE GSDPLLWA+Q+SS+L++AGVSLPS E+ +LL+S+ICW NNVPI
Sbjct: 7 TSIWDNILEHTNVAQEKGSDPLLWAVQLSSSLSSAGVSLPSVEVANLLVSHICWGNNVPI 66
Query: 78 AWKFLAKALVCKIVPPLPVLALLSIR 1
AWKFL KAL+ KIVPP+PVLALLS R
Sbjct: 67 AWKFLEKALMIKIVPPMPVLALLSTR 92
>ref|XP_002516789.1| conserved hypothetical protein [Ricinus communis]
gi|223543877|gb|EEF45403.1| conserved hypothetical
protein [Ricinus communis]
Length = 1325
Score = 130 bits (326), Expect = 2e-28
Identities = 62/86 (72%), Positives = 73/86 (84%)
Frame = -2
Query: 258 SSLWDGILELTKWAQENGSDPLLWAIQVSSNLNAAGVSLPSFELGDLLISYICWENNVPI 79
SS+WD ++E+TK AQE G DPLLWA+Q+SSNL++ GVSLPS EL D+L+SYICW+NNVPI
Sbjct: 7 SSIWDYVVEMTKLAQEKGGDPLLWALQISSNLSSNGVSLPSPELADVLVSYICWDNNVPI 66
Query: 78 AWKFLAKALVCKIVPPLPVLALLSIR 1
WKFL KALV KIVP L VLALLS R
Sbjct: 67 IWKFLEKALVLKIVPSLMVLALLSDR 92
>ref|XP_006419799.1| hypothetical protein CICLE_v10006738mg [Citrus clementina]
gi|568872251|ref|XP_006489285.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 33A-like [Citrus
sinensis] gi|557521672|gb|ESR33039.1| hypothetical
protein CICLE_v10006738mg [Citrus clementina]
Length = 1331
Score = 128 bits (322), Expect = 7e-28
Identities = 58/85 (68%), Positives = 73/85 (85%)
Frame = -2
Query: 255 SLWDGILELTKWAQENGSDPLLWAIQVSSNLNAAGVSLPSFELGDLLISYICWENNVPIA 76
++WD ++E+TK AQE GSDPLLWA+Q+SS+LN+AGVSLPS EL +L+SYICW+NNVPIA
Sbjct: 14 AVWDNVMEVTKVAQEKGSDPLLWAVQLSSSLNSAGVSLPSVELAHVLVSYICWDNNVPIA 73
Query: 75 WKFLAKALVCKIVPPLPVLALLSIR 1
WKF+ KAL +I PPL +LALLS R
Sbjct: 74 WKFVEKALTLRIAPPLLLLALLSTR 98
>ref|XP_004298175.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Fragaria vesca subsp. vesca]
Length = 1322
Score = 127 bits (318), Expect = 2e-27
Identities = 58/86 (67%), Positives = 74/86 (86%)
Frame = -2
Query: 258 SSLWDGILELTKWAQENGSDPLLWAIQVSSNLNAAGVSLPSFELGDLLISYICWENNVPI 79
SS+WD ++ELTK AQ+ GSDPL+W +Q+SSNL++ GVSLPS +L ++L+S+ICWENNVPI
Sbjct: 4 SSIWDSVVELTKVAQQKGSDPLVWVLQLSSNLSSRGVSLPSVDLANVLVSHICWENNVPI 63
Query: 78 AWKFLAKALVCKIVPPLPVLALLSIR 1
WKFL KAL+ KIVPP+ VLALLS R
Sbjct: 64 MWKFLEKALMLKIVPPMIVLALLSQR 89
>ref|XP_004165440.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Cucumis sativus]
Length = 1311
Score = 124 bits (311), Expect = 1e-26
Identities = 57/86 (66%), Positives = 72/86 (83%)
Frame = -2
Query: 258 SSLWDGILELTKWAQENGSDPLLWAIQVSSNLNAAGVSLPSFELGDLLISYICWENNVPI 79
++LWD + ELTK AQ+ G DPLLWAIQ+SSNLN+AGV LPS EL +LL+S+ICW+NN P+
Sbjct: 7 NNLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVVLPSVELANLLVSHICWDNNEPV 66
Query: 78 AWKFLAKALVCKIVPPLPVLALLSIR 1
+WKFL KAL+ IVPP+ VLALL+ R
Sbjct: 67 SWKFLEKALILNIVPPILVLALLTTR 92
>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
Length = 2712
Score = 124 bits (311), Expect = 1e-26
Identities = 57/86 (66%), Positives = 72/86 (83%)
Frame = -2
Query: 258 SSLWDGILELTKWAQENGSDPLLWAIQVSSNLNAAGVSLPSFELGDLLISYICWENNVPI 79
++LWD + ELTK AQ+ G DPLLWAIQ+SSNLN+AGV LPS EL +LL+S+ICW+NN P+
Sbjct: 7 NNLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVVLPSVELANLLVSHICWDNNEPV 66
Query: 78 AWKFLAKALVCKIVPPLPVLALLSIR 1
+WKFL KAL+ IVPP+ VLALL+ R
Sbjct: 67 SWKFLEKALILNIVPPILVLALLTTR 92
>gb|EMJ26654.1| hypothetical protein PRUPE_ppa000298mg [Prunus persica]
Length = 1326
Score = 124 bits (310), Expect = 2e-26
Identities = 57/85 (67%), Positives = 71/85 (83%)
Frame = -2
Query: 255 SLWDGILELTKWAQENGSDPLLWAIQVSSNLNAAGVSLPSFELGDLLISYICWENNVPIA 76
S+WD ++ELTK AQ+ GSDPLLW IQ+SSNL + GVS+PS EL ++L+SYI W+NNVPI
Sbjct: 8 SIWDSVVELTKVAQQKGSDPLLWVIQLSSNLKSRGVSMPSVELANVLVSYIFWDNNVPIT 67
Query: 75 WKFLAKALVCKIVPPLPVLALLSIR 1
WKFL KAL+ K+VPP+ VLALLS R
Sbjct: 68 WKFLEKALMLKMVPPMLVLALLSTR 92
>ref|XP_004158628.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33B-like [Cucumis sativus]
Length = 739
Score = 123 bits (309), Expect = 2e-26
Identities = 57/86 (66%), Positives = 70/86 (81%)
Frame = -2
Query: 258 SSLWDGILELTKWAQENGSDPLLWAIQVSSNLNAAGVSLPSFELGDLLISYICWENNVPI 79
+ LWD +LELTK AQ+ DPLLWA+Q+SS LN+AGVSLPS EL LL+S+ICW+N+VPI
Sbjct: 15 AGLWDTVLELTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQLLVSHICWDNHVPI 74
Query: 78 AWKFLAKALVCKIVPPLPVLALLSIR 1
WKFL KA+ +IVPPL V+ALLS R
Sbjct: 75 MWKFLEKAMTARIVPPLLVIALLSTR 100
>ref|XP_004140216.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Cucumis sativus]
Length = 1335
Score = 123 bits (309), Expect = 2e-26
Identities = 57/86 (66%), Positives = 70/86 (81%)
Frame = -2
Query: 258 SSLWDGILELTKWAQENGSDPLLWAIQVSSNLNAAGVSLPSFELGDLLISYICWENNVPI 79
+ LWD +LELTK AQ+ DPLLWA+Q+SS LN+AGVSLPS EL LL+S+ICW+N+VPI
Sbjct: 15 AGLWDTVLELTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQLLVSHICWDNHVPI 74
Query: 78 AWKFLAKALVCKIVPPLPVLALLSIR 1
WKFL KA+ +IVPPL V+ALLS R
Sbjct: 75 MWKFLEKAMTARIVPPLLVIALLSTR 100
>ref|XP_004229451.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Solanum lycopersicum]
Length = 1303
Score = 122 bits (307), Expect = 4e-26
Identities = 57/85 (67%), Positives = 70/85 (82%)
Frame = -2
Query: 255 SLWDGILELTKWAQENGSDPLLWAIQVSSNLNAAGVSLPSFELGDLLISYICWENNVPIA 76
+LWD +LE+TK QE G DPL+WA+QVSS L+++GVSLPSFEL + L+S+ICWENN+PIA
Sbjct: 8 NLWDSVLEITKVEQEKGGDPLVWAVQVSSCLSSSGVSLPSFELANFLVSHICWENNLPIA 67
Query: 75 WKFLAKALVCKIVPPLPVLALLSIR 1
WKFL KALV KIV P+ V LLS R
Sbjct: 68 WKFLEKALVLKIVSPIIVFPLLSSR 92
>gb|EMJ00881.1| hypothetical protein PRUPE_ppa000301mg [Prunus persica]
Length = 1313
Score = 122 bits (306), Expect = 5e-26
Identities = 57/86 (66%), Positives = 71/86 (82%)
Frame = -2
Query: 258 SSLWDGILELTKWAQENGSDPLLWAIQVSSNLNAAGVSLPSFELGDLLISYICWENNVPI 79
S LWD +L+LTK AQ+ SDPLLWA+Q+S++LN+AGV+LPS EL LL+S+ICW N+VPI
Sbjct: 11 SHLWDTVLQLTKSAQDKNSDPLLWAVQLSNSLNSAGVALPSVELAHLLVSHICWANHVPI 70
Query: 78 AWKFLAKALVCKIVPPLPVLALLSIR 1
WKFL KAL KIVPP+ VLALLS +
Sbjct: 71 TWKFLEKALTVKIVPPMLVLALLSTK 96
>ref|XP_006339413.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Solanum tuberosum]
Length = 1318
Score = 122 bits (305), Expect = 7e-26
Identities = 59/85 (69%), Positives = 69/85 (81%)
Frame = -2
Query: 255 SLWDGILELTKWAQENGSDPLLWAIQVSSNLNAAGVSLPSFELGDLLISYICWENNVPIA 76
+LWD +LE+TK AQE G DPL+WAIQVSS L ++GVSLPSFEL + L+S ICWENN+PIA
Sbjct: 8 NLWDSVLEITKVAQEKGGDPLVWAIQVSSCLISSGVSLPSFELANFLVSNICWENNLPIA 67
Query: 75 WKFLAKALVCKIVPPLPVLALLSIR 1
WKFL KALV KIV P+ V LLS R
Sbjct: 68 WKFLEKALVLKIVSPIIVFPLLSSR 92
>ref|XP_004290677.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33B-like [Fragaria vesca subsp. vesca]
Length = 1331
Score = 122 bits (305), Expect = 7e-26
Identities = 58/86 (67%), Positives = 69/86 (80%)
Frame = -2
Query: 258 SSLWDGILELTKWAQENGSDPLLWAIQVSSNLNAAGVSLPSFELGDLLISYICWENNVPI 79
S LWD +L LTK AQ+ SDPLLWA+Q+SS+LN+A VSLPS EL LL+S+ICW N+VPI
Sbjct: 11 SHLWDSVLHLTKSAQDKNSDPLLWALQLSSSLNSAAVSLPSVELAHLLVSHICWANHVPI 70
Query: 78 AWKFLAKALVCKIVPPLPVLALLSIR 1
WKFL KAL KIVPP+ VLALLS +
Sbjct: 71 TWKFLEKALTVKIVPPMLVLALLSTK 96
>ref|XP_004247142.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Solanum lycopersicum]
Length = 1321
Score = 121 bits (304), Expect = 9e-26
Identities = 57/86 (66%), Positives = 72/86 (83%)
Frame = -2
Query: 258 SSLWDGILELTKWAQENGSDPLLWAIQVSSNLNAAGVSLPSFELGDLLISYICWENNVPI 79
SSLWDG++ELTK AQ G+DPL+WA+Q+SS LN+AG SLPS ++ +LL+S+ICW+NN PI
Sbjct: 9 SSLWDGVIELTKLAQLKGTDPLMWAMQLSSTLNSAGHSLPSTDVANLLVSHICWDNNDPI 68
Query: 78 AWKFLAKALVCKIVPPLPVLALLSIR 1
AWK L KAL +IVPP+ VLALLS R
Sbjct: 69 AWKLLEKALALRIVPPMFVLALLSNR 94
>ref|XP_006355878.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Solanum tuberosum]
Length = 1321
Score = 121 bits (303), Expect = 1e-25
Identities = 57/86 (66%), Positives = 71/86 (82%)
Frame = -2
Query: 258 SSLWDGILELTKWAQENGSDPLLWAIQVSSNLNAAGVSLPSFELGDLLISYICWENNVPI 79
SSLWDG++ELTK AQ G+DPL+WA+Q+SS LN+AG S+PS ++ LL+S+ICW NN PI
Sbjct: 9 SSLWDGVIELTKLAQLKGTDPLMWAMQLSSTLNSAGHSMPSTDVASLLVSHICWGNNDPI 68
Query: 78 AWKFLAKALVCKIVPPLPVLALLSIR 1
AWKFL KAL +IVPP+ VLALLS R
Sbjct: 69 AWKFLEKALALRIVPPMFVLALLSNR 94
>gb|EMJ28469.1| hypothetical protein PRUPE_ppa017778mg [Prunus persica]
Length = 1302
Score = 120 bits (302), Expect = 1e-25
Identities = 56/86 (65%), Positives = 71/86 (82%)
Frame = -2
Query: 258 SSLWDGILELTKWAQENGSDPLLWAIQVSSNLNAAGVSLPSFELGDLLISYICWENNVPI 79
SS+WD +++ TK AQE G+DP LW++QVSSNL++AGV +PS EL ++L+SYICWENNVPI
Sbjct: 7 SSVWDVVIKQTKEAQEKGTDPFLWSMQVSSNLSSAGVCIPSMELANVLVSYICWENNVPI 66
Query: 78 AWKFLAKALVCKIVPPLPVLALLSIR 1
WKFL KALV +VP + VLALLS R
Sbjct: 67 LWKFLEKALVLNMVPSMLVLALLSSR 92
>ref|XP_002271735.2| PREDICTED: uncharacterized protein LOC100254459 [Vitis vinifera]
Length = 1321
Score = 119 bits (299), Expect = 3e-25
Identities = 58/84 (69%), Positives = 67/84 (79%)
Frame = -2
Query: 252 LWDGILELTKWAQENGSDPLLWAIQVSSNLNAAGVSLPSFELGDLLISYICWENNVPIAW 73
LWD +LELTK AQE SDPLLWA+Q+SS LN+AG SLPS EL LL+S+ICW NNVPI W
Sbjct: 19 LWDSVLELTKSAQERNSDPLLWAVQLSSILNSAGTSLPSPELAHLLVSHICWANNVPITW 78
Query: 72 KFLAKALVCKIVPPLPVLALLSIR 1
KFL KA+ +I PP+ VLALLS R
Sbjct: 79 KFLEKAVSGRIAPPMLVLALLSSR 102
>emb|CBI32346.3| unnamed protein product [Vitis vinifera]
Length = 1388
Score = 119 bits (299), Expect = 3e-25
Identities = 58/84 (69%), Positives = 67/84 (79%)
Frame = -2
Query: 252 LWDGILELTKWAQENGSDPLLWAIQVSSNLNAAGVSLPSFELGDLLISYICWENNVPIAW 73
LWD +LELTK AQE SDPLLWA+Q+SS LN+AG SLPS EL LL+S+ICW NNVPI W
Sbjct: 70 LWDSVLELTKSAQERNSDPLLWAVQLSSILNSAGTSLPSPELAHLLVSHICWANNVPITW 129
Query: 72 KFLAKALVCKIVPPLPVLALLSIR 1
KFL KA+ +I PP+ VLALLS R
Sbjct: 130 KFLEKAVSGRIAPPMLVLALLSSR 153
>ref|XP_002311827.1| hypothetical protein POPTR_0008s20610g [Populus trichocarpa]
gi|222851647|gb|EEE89194.1| hypothetical protein
POPTR_0008s20610g [Populus trichocarpa]
Length = 1304
Score = 119 bits (298), Expect = 4e-25
Identities = 55/86 (63%), Positives = 72/86 (83%)
Frame = -2
Query: 258 SSLWDGILELTKWAQENGSDPLLWAIQVSSNLNAAGVSLPSFELGDLLISYICWENNVPI 79
+++WD +LE+TK AQE GSDPL+WA+QVSS+L+++GV LPS EL ++L+SYI W+NN+PI
Sbjct: 7 NTIWDSVLEITKVAQEKGSDPLIWALQVSSSLSSSGVGLPSPELANVLVSYIFWDNNMPI 66
Query: 78 AWKFLAKALVCKIVPPLPVLALLSIR 1
WK L KAL +IVPPL VLALLS R
Sbjct: 67 LWKLLEKALALRIVPPLMVLALLSDR 92