BLASTX nr result

ID: Rauwolfia21_contig00022198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00022198
         (280 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41501.1| unknown [Lotus japonicus]                               58   1e-06
ref|XP_006594058.1| PREDICTED: tetratricopeptide repeat protein ...    56   6e-06
ref|XP_003541377.1| PREDICTED: tetratricopeptide repeat protein ...    56   6e-06
ref|XP_003537118.1| PREDICTED: tetratricopeptide repeat protein ...    56   6e-06
ref|XP_006443697.1| hypothetical protein CICLE_v10020743mg [Citr...    55   1e-05

>gb|AFK41501.1| unknown [Lotus japonicus]
          Length = 174

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 24/52 (46%), Positives = 32/52 (61%)
 Frame = +3

Query: 12  PRCVKVNEKRRLYDVLKEPNFVVPGIPAXXXXXXXXXXXXXXXXGNWVPPKV 167
           P+ +KVNE+R+L+DVLKEPNF++PGIP                 G WVPP +
Sbjct: 123 PKWIKVNERRQLHDVLKEPNFIIPGIPVFYVVSTRSSFYTKFKAGKWVPPSI 174


>ref|XP_006594058.1| PREDICTED: tetratricopeptide repeat protein 4 homolog isoform X2
           [Glycine max]
          Length = 361

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/52 (44%), Positives = 30/52 (57%)
 Frame = +3

Query: 12  PRCVKVNEKRRLYDVLKEPNFVVPGIPAXXXXXXXXXXXXXXXXGNWVPPKV 167
           P+ +KVNE+R L+DVLKEPNF++PGIP                 G W PP +
Sbjct: 310 PKWIKVNERRTLHDVLKEPNFIIPGIPVFYVVSKRSSFYGKFKAGKWAPPSI 361


>ref|XP_003541377.1| PREDICTED: tetratricopeptide repeat protein 4 homolog isoform X1
           [Glycine max]
          Length = 360

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/52 (44%), Positives = 30/52 (57%)
 Frame = +3

Query: 12  PRCVKVNEKRRLYDVLKEPNFVVPGIPAXXXXXXXXXXXXXXXXGNWVPPKV 167
           P+ +KVNE+R L+DVLKEPNF++PGIP                 G W PP +
Sbjct: 309 PKWIKVNERRTLHDVLKEPNFIIPGIPVFYVVSKRSSFYGKFKAGKWAPPSI 360


>ref|XP_003537118.1| PREDICTED: tetratricopeptide repeat protein 4 homolog [Glycine max]
          Length = 360

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/52 (44%), Positives = 30/52 (57%)
 Frame = +3

Query: 12  PRCVKVNEKRRLYDVLKEPNFVVPGIPAXXXXXXXXXXXXXXXXGNWVPPKV 167
           P+ +KVNE+R L+DVLKEPNF++PGIP                 G W PP +
Sbjct: 309 PKWIKVNERRTLHDVLKEPNFIIPGIPVFYVVSKQSSFYGKFKAGKWAPPSI 360


>ref|XP_006443697.1| hypothetical protein CICLE_v10020743mg [Citrus clementina]
           gi|568851454|ref|XP_006479407.1| PREDICTED:
           tetratricopeptide repeat protein 4 homolog [Citrus
           sinensis] gi|557545959|gb|ESR56937.1| hypothetical
           protein CICLE_v10020743mg [Citrus clementina]
          Length = 364

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/49 (51%), Positives = 29/49 (59%)
 Frame = +3

Query: 15  RCVKVNEKRRLYDVLKEPNFVVPGIPAXXXXXXXXXXXXXXXXGNWVPP 161
           R VKVNEKR+L+DVLKEPNF++PGIP                 G W PP
Sbjct: 315 RWVKVNEKRKLHDVLKEPNFIIPGIPVFYVVSKTSSFYKEFKGGKWSPP 363


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