BLASTX nr result

ID: Rauwolfia21_contig00021804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00021804
         (1190 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006488245.1| PREDICTED: pentatricopeptide repeat-containi...    94   1e-16
gb|EXC35073.1| hypothetical protein L484_010855 [Morus notabilis]      91   1e-15
gb|ESW04113.1| hypothetical protein PHAVU_011G068200g [Phaseolus...    90   2e-15
ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containi...    89   4e-15
ref|XP_006424739.1| hypothetical protein CICLE_v10030177mg [Citr...    87   2e-14
ref|XP_004505902.1| PREDICTED: pentatricopeptide repeat-containi...    86   2e-14
gb|EMJ08380.1| hypothetical protein PRUPE_ppa017156mg [Prunus pe...    86   2e-14
ref|XP_002303899.2| pentatricopeptide repeat-containing family p...    84   1e-13
gb|EMJ09951.1| hypothetical protein PRUPE_ppa015993mg [Prunus pe...    82   4e-13
ref|XP_004251315.1| PREDICTED: pentatricopeptide repeat-containi...    82   4e-13
ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-12
emb|CBI16200.3| unnamed protein product [Vitis vinifera]               79   4e-12
ref|XP_006363379.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-11
ref|XP_006363378.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-11
emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]    75   7e-11
ref|NP_172253.1| pentatricopeptide repeat-containing protein [Ar...    72   4e-10
gb|EOY34160.1| Tetratricopeptide repeat-like superfamily protein...    72   4e-10
ref|XP_006417772.1| hypothetical protein EUTSA_v10009298mg [Eutr...    72   6e-10
ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-09
ref|XP_004295952.1| PREDICTED: pentatricopeptide repeat-containi...    69   4e-09

>ref|XP_006488245.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Citrus sinensis]
          Length = 477

 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 44/76 (57%), Positives = 56/76 (73%)
 Frame = +1

Query: 4   VLNVMLKSRHFPQKETFSCLFAGLVKSKNLDSACFVLEEMEKINMRFELESWESLIVDSC 183
           VLN ML SRH P+ ETFSCL  GL+K   +D ACFVLEEMEK  MRF+L++WE L+ D+C
Sbjct: 401 VLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 460

Query: 184 RDEKFVNGLVTELIAS 231
             +    GLV+ELI++
Sbjct: 461 IGDGNAGGLVSELIST 476


>gb|EXC35073.1| hypothetical protein L484_010855 [Morus notabilis]
          Length = 461

 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 43/76 (56%), Positives = 55/76 (72%)
 Frame = +1

Query: 4   VLNVMLKSRHFPQKETFSCLFAGLVKSKNLDSACFVLEEMEKINMRFELESWESLIVDSC 183
           VLN ML SRH P+ E+F CL  GLVK  NL+ ACFVLEEM K  M+F+LE W++L+V++C
Sbjct: 385 VLNAMLTSRHCPRLESFRCLIMGLVKCGNLEDACFVLEEMGKRKMQFDLEGWDALVVEAC 444

Query: 184 RDEKFVNGLVTELIAS 231
                 +GLVTELI +
Sbjct: 445 GRNSGADGLVTELITA 460


>gb|ESW04113.1| hypothetical protein PHAVU_011G068200g [Phaseolus vulgaris]
          Length = 447

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 42/74 (56%), Positives = 57/74 (77%)
 Frame = +1

Query: 1   NVLNVMLKSRHFPQKETFSCLFAGLVKSKNLDSACFVLEEMEKINMRFELESWESLIVDS 180
           +VLN ML SRH+P+ ETF+CL  GL+KS N+D ACFVLEEMEK  + F+L SWE++I  +
Sbjct: 371 SVLNAMLTSRHWPRSETFNCLVVGLLKSGNIDGACFVLEEMEKRKVEFDLGSWETIIKFA 430

Query: 181 CRDEKFVNGLVTEL 222
           C ++K V+ L+T L
Sbjct: 431 CSEDKGVSELLTVL 444


>ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Glycine max]
          Length = 449

 Score = 89.0 bits (219), Expect = 4e-15
 Identities = 40/74 (54%), Positives = 55/74 (74%)
 Frame = +1

Query: 1   NVLNVMLKSRHFPQKETFSCLFAGLVKSKNLDSACFVLEEMEKINMRFELESWESLIVDS 180
           +VLN ML SRH P+ ETF+C+  GL+KS N+D +CFVLEEMEK  + F+LESWE++I  +
Sbjct: 371 SVLNAMLTSRHCPRSETFNCMVVGLLKSGNIDGSCFVLEEMEKRKLEFDLESWETIIKSA 430

Query: 181 CRDEKFVNGLVTEL 222
           C + K  + L+T L
Sbjct: 431 CSENKGASELMTVL 444


>ref|XP_006424739.1| hypothetical protein CICLE_v10030177mg [Citrus clementina]
           gi|557526673|gb|ESR37979.1| hypothetical protein
           CICLE_v10030177mg [Citrus clementina]
          Length = 797

 Score = 86.7 bits (213), Expect = 2e-14
 Identities = 41/73 (56%), Positives = 51/73 (69%)
 Frame = +1

Query: 4   VLNVMLKSRHFPQKETFSCLFAGLVKSKNLDSACFVLEEMEKINMRFELESWESLIVDSC 183
           VLN ML SRH P+ ETFSCL  GL+K   +D ACFVLEEMEK  MRF+L++WE L+ D+C
Sbjct: 399 VLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 458

Query: 184 RDEKFVNGLVTEL 222
             +    GL  +L
Sbjct: 459 IGDGNAGGLNYDL 471


>ref|XP_004505902.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Cicer arietinum]
          Length = 452

 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 42/79 (53%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1   NVLNVMLKSRHFPQKETFSCLFAGLVKSKNLDSACFVLEEMEKINMRFELESWESLIVDS 180
           NVLN ML SRH P+ +TF+CL  GL+KS N+D  CFVLEEMEK  + F+LESWE++I  +
Sbjct: 373 NVLNAMLASRHCPRSDTFNCLVVGLLKSGNVDGGCFVLEEMEKRKVDFDLESWETVIKFA 432

Query: 181 C-RDEKFVNGLVTELIASS 234
           C  D+K  +GL+  + + S
Sbjct: 433 CSEDDKAASGLMNIITSLS 451


>gb|EMJ08380.1| hypothetical protein PRUPE_ppa017156mg [Prunus persica]
          Length = 727

 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 42/76 (55%), Positives = 53/76 (69%)
 Frame = +1

Query: 4   VLNVMLKSRHFPQKETFSCLFAGLVKSKNLDSACFVLEEMEKINMRFELESWESLIVDSC 183
           VL  ML SRH P+ ETF CL  GLVK   +D AC VLEEMEK NM+F  E+WE+L+VD+C
Sbjct: 404 VLIAMLTSRHCPRLETFECLVTGLVKCGKIDDACVVLEEMEKRNMQFCFEAWEALVVDAC 463

Query: 184 RDEKFVNGLVTELIAS 231
            +      +VTELI++
Sbjct: 464 GENVVAGEVVTELIST 479


>ref|XP_002303899.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550343608|gb|EEE78878.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 463

 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 43/72 (59%), Positives = 51/72 (70%)
 Frame = +1

Query: 4   VLNVMLKSRHFPQKETFSCLFAGLVKSKNLDSACFVLEEMEKINMRFELESWESLIVDSC 183
           VLN ML S HFP+ ETF  L  GLVKS NLD ACFVLEEMEK  M F  + WE+L+++SC
Sbjct: 383 VLNAMLTSGHFPRVETFRSLVVGLVKSGNLDGACFVLEEMEKRQMMFCADDWEALVMESC 442

Query: 184 RDEKFVNGLVTE 219
           R ++  NG V E
Sbjct: 443 RGDE--NGSVGE 452


>gb|EMJ09951.1| hypothetical protein PRUPE_ppa015993mg [Prunus persica]
          Length = 714

 Score = 82.0 bits (201), Expect = 4e-13
 Identities = 41/76 (53%), Positives = 52/76 (68%)
 Frame = +1

Query: 4   VLNVMLKSRHFPQKETFSCLFAGLVKSKNLDSACFVLEEMEKINMRFELESWESLIVDSC 183
           VL  ML SRH P+ ETF CL  GLVK   +D A  VLEEMEK NM+F  E+WE+L+VD+C
Sbjct: 391 VLIAMLTSRHCPRLETFECLVTGLVKCGKIDDAFVVLEEMEKRNMQFCFEAWEALVVDAC 450

Query: 184 RDEKFVNGLVTELIAS 231
            +      +VTELI++
Sbjct: 451 GENVVAGEVVTELIST 466


>ref|XP_004251315.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Solanum lycopersicum]
          Length = 473

 Score = 82.0 bits (201), Expect = 4e-13
 Identities = 37/74 (50%), Positives = 50/74 (67%)
 Frame = +1

Query: 4   VLNVMLKSRHFPQKETFSCLFAGLVKSKNLDSACFVLEEMEKINMRFELESWESLIVDSC 183
           VLN ML SRHFP+ ET  CL  GL+    ++ ACFVLEEMEK   +F  +SWE ++ DSC
Sbjct: 399 VLNAMLMSRHFPRMETVRCLILGLLDKGKVEDACFVLEEMEKRKKKFNFDSWEVIVKDSC 458

Query: 184 RDEKFVNGLVTELI 225
             ++ V+ L+ EL+
Sbjct: 459 TSDRSVSQLLDELV 472


>ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Vitis vinifera]
          Length = 501

 Score = 80.9 bits (198), Expect = 1e-12
 Identities = 38/76 (50%), Positives = 53/76 (69%)
 Frame = +1

Query: 4   VLNVMLKSRHFPQKETFSCLFAGLVKSKNLDSACFVLEEMEKINMRFELESWESLIVDSC 183
           VL+ ML   H P+ E+F  L  GL+K+  +D ACFVLEEMEK  MRF LE+WE+L+ D+C
Sbjct: 424 VLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVKDAC 483

Query: 184 RDEKFVNGLVTELIAS 231
             ++   GLV EL+++
Sbjct: 484 PGDRGAGGLVRELVSA 499


>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score = 79.0 bits (193), Expect = 4e-12
 Identities = 38/73 (52%), Positives = 50/73 (68%)
 Frame = +1

Query: 4    VLNVMLKSRHFPQKETFSCLFAGLVKSKNLDSACFVLEEMEKINMRFELESWESLIVDSC 183
            VL+ ML   H P+ E+F  L  GL+K+  +D ACFVLEEMEK  MRF LE+WE+L+ D+C
Sbjct: 786  VLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVKDAC 845

Query: 184  RDEKFVNGLVTEL 222
              ++   GLV EL
Sbjct: 846  PGDRGAGGLVREL 858


>ref|XP_006363379.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like isoform X2 [Solanum tuberosum]
          Length = 492

 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = +1

Query: 4   VLNVMLKSRHFPQKETFSCLFAGLVKSKNLDSACFVLEEMEKINMRFELESWESLIVDSC 183
           VLN ML SRHFP+ ET  CL  GL+    ++ ACFVLEEMEK   +F  +SWE+++ DSC
Sbjct: 396 VLNAMLMSRHFPRMETVRCLILGLLDKGKVEDACFVLEEMEKRKKKFNFDSWEAIVKDSC 455

Query: 184 RDEK 195
             ++
Sbjct: 456 TSDR 459


>ref|XP_006363378.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like isoform X1 [Solanum tuberosum]
          Length = 506

 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = +1

Query: 4   VLNVMLKSRHFPQKETFSCLFAGLVKSKNLDSACFVLEEMEKINMRFELESWESLIVDSC 183
           VLN ML SRHFP+ ET  CL  GL+    ++ ACFVLEEMEK   +F  +SWE+++ DSC
Sbjct: 396 VLNAMLMSRHFPRMETVRCLILGLLDKGKVEDACFVLEEMEKRKKKFNFDSWEAIVKDSC 455

Query: 184 RDEK 195
             ++
Sbjct: 456 TSDR 459


>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
          Length = 1051

 Score = 74.7 bits (182), Expect = 7e-11
 Identities = 35/73 (47%), Positives = 49/73 (67%)
 Frame = +1

Query: 4   VLNVMLKSRHFPQKETFSCLFAGLVKSKNLDSACFVLEEMEKINMRFELESWESLIVDSC 183
           VL+ ML   H P+ E+F  L  GL+K+  +D ACFVLEEMEK  MRF LE+WE+L+ D+C
Sbjct: 715 VLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVKDAC 774

Query: 184 RDEKFVNGLVTEL 222
             ++   GL  ++
Sbjct: 775 PGDRGAGGLDVQI 787


>ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g07740, mitochondrial; Flags: Precursor
           gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR
           repeats PF|01535 [Arabidopsis thaliana]
           gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis
           thaliana] gi|31376389|gb|AAP49521.1| At1g07730
           [Arabidopsis thaliana] gi|51970836|dbj|BAD44110.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332190050|gb|AEE28171.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 459

 Score = 72.0 bits (175), Expect = 4e-10
 Identities = 34/61 (55%), Positives = 41/61 (67%)
 Frame = +1

Query: 1   NVLNVMLKSRHFPQKETFSCLFAGLVKSKNLDSACFVLEEMEKINMRFELESWESLIVDS 180
           NVLN ML SRH P   TF C+ AGL+K  NLD ACFVLE M K N+ F   +W++L+ D 
Sbjct: 382 NVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDL 441

Query: 181 C 183
           C
Sbjct: 442 C 442


>gb|EOY34160.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 951

 Score = 72.0 bits (175), Expect = 4e-10
 Identities = 38/74 (51%), Positives = 48/74 (64%)
 Frame = +1

Query: 4    VLNVMLKSRHFPQKETFSCLFAGLVKSKNLDSACFVLEEMEKINMRFELESWESLIVDSC 183
            VLNVM  S H P+ ET   L  GL+K   +D ACFVLEEMEK  M F+LE+W +L+ D+C
Sbjct: 874  VLNVMFTSGHCPRLETLCQLVTGLLKCGKIDGACFVLEEMEKRKMSFDLEAWGALVRDAC 933

Query: 184  RDEKFVNGLVTELI 225
              +   N L T+LI
Sbjct: 934  GGDD-TNDLQTQLI 946


>ref|XP_006417772.1| hypothetical protein EUTSA_v10009298mg [Eutrema salsugineum]
           gi|557095543|gb|ESQ36125.1| hypothetical protein
           EUTSA_v10009298mg [Eutrema salsugineum]
          Length = 460

 Score = 71.6 bits (174), Expect = 6e-10
 Identities = 33/61 (54%), Positives = 41/61 (67%)
 Frame = +1

Query: 1   NVLNVMLKSRHFPQKETFSCLFAGLVKSKNLDSACFVLEEMEKINMRFELESWESLIVDS 180
           NVLN ML SRH P   TF C+ +GL+K  NLD ACFVLE M K N+ F   +W++L+ D 
Sbjct: 383 NVLNAMLASRHSPTPATFVCMVSGLIKGDNLDHACFVLEVMGKKNLSFGSGAWQNLLCDL 442

Query: 181 C 183
           C
Sbjct: 443 C 443


>ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Cucumis sativus]
          Length = 460

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
 Frame = +1

Query: 4   VLNVMLKSRHFPQKETFSCLFAGLVKSKNLDS-ACFVLEEMEKINMRFELESWESLIVDS 180
           +LN ML S H+P  +TF+ L  GL+K +N D   CFVLEEMEK  +RF+ E+W  LI+D 
Sbjct: 383 ILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYVCFVLEEMEKRQLRFDAETWRILIMDV 442

Query: 181 CRDEKFVNGLVTELIA 228
           C     +   + +LI+
Sbjct: 443 CGQHVEIGSHLNDLIS 458


>ref|XP_004295952.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 468

 Score = 68.9 bits (167), Expect = 4e-09
 Identities = 33/76 (43%), Positives = 48/76 (63%)
 Frame = +1

Query: 4   VLNVMLKSRHFPQKETFSCLFAGLVKSKNLDSACFVLEEMEKINMRFELESWESLIVDSC 183
           VL  ML S+H P+ ETF  L  GL+K  N+D ACFVLEEME  N+    + WE+ +V +C
Sbjct: 392 VLIAMLTSKHCPRLETFERLVTGLLKCGNVDGACFVLEEMENRNLELCCDVWEAPVVAAC 451

Query: 184 RDEKFVNGLVTELIAS 231
            ++      +TE+I++
Sbjct: 452 GEDSIAGDTMTEVISA 467


Top