BLASTX nr result
ID: Rauwolfia21_contig00021647
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00021647
(290 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme... 114 1e-23
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme... 113 2e-23
ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr... 108 7e-22
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 103 3e-20
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 103 3e-20
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 99 6e-19
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme... 98 1e-18
ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid... 97 2e-18
gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus no... 97 3e-18
ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutr... 96 5e-18
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 96 5e-18
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 96 5e-18
ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polyme... 96 6e-18
ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polyme... 95 8e-18
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme... 91 2e-16
ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polyme... 91 2e-16
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu... 89 6e-16
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu... 89 6e-16
ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Caps... 89 6e-16
gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial ... 87 2e-15
>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 911
Score = 114 bits (285), Expect = 1e-23
Identities = 57/96 (59%), Positives = 74/96 (77%)
Frame = +1
Query: 1 VAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRAALKVAIINGG 180
VA+S++P + YLSK L++LL YGGV + F++LL SAL+ET+ VY KRAALKV I
Sbjct: 528 VAISHRPNKAYLSKNLISLLSYGGVQKEYFMELLGSALEETKQVYLRKRAALKVVINYRE 587
Query: 181 VDDDSTAARMISSGVPLSEPHLQDRLSKLVNVERTK 288
+DDD ARMISSG+PL+EPHL+ RLS+L +ERTK
Sbjct: 588 MDDDCLTARMISSGIPLNEPHLRARLSRLAKIERTK 623
>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 1011
Score = 113 bits (283), Expect = 2e-23
Identities = 57/96 (59%), Positives = 74/96 (77%)
Frame = +1
Query: 1 VAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRAALKVAIINGG 180
VA+S++P + YLSK L++LL YGGV + F++LL SAL+ET+ VY KRAALKVAI
Sbjct: 526 VAISHRPNKAYLSKNLISLLSYGGVHKEYFMELLGSALEETKQVYLRKRAALKVAINYRE 585
Query: 181 VDDDSTAARMISSGVPLSEPHLQDRLSKLVNVERTK 288
+DD+ ARMISSG+PL+EPHL RLS+L +ERTK
Sbjct: 586 MDDECLTARMISSGIPLNEPHLHARLSRLAKIERTK 621
>ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]
gi|557110064|gb|ESQ50361.1| hypothetical protein
EUTSA_v10001897mg [Eutrema salsugineum]
Length = 988
Score = 108 bits (270), Expect = 7e-22
Identities = 54/94 (57%), Positives = 73/94 (77%)
Frame = +1
Query: 1 VAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRAALKVAIINGG 180
V SN P+RT LS+ LVALL YGGVP FLDLL++ ++ET+ +++NKRAALK A+ +G
Sbjct: 505 VTTSNPPKRTKLSRNLVALLSYGGVPNEFFLDLLLNTMEETKTIFNNKRAALKAALNHGD 564
Query: 181 VDDDSTAARMISSGVPLSEPHLQDRLSKLVNVER 282
+DD + AA+MI G+PL EPHL+DRLS L N+E+
Sbjct: 565 MDDQN-AAQMILVGIPLDEPHLKDRLSILSNIEK 597
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 103 bits (256), Expect = 3e-20
Identities = 54/94 (57%), Positives = 69/94 (73%)
Frame = +1
Query: 1 VAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRAALKVAIINGG 180
V SN+PR+TYLS+ L+ALL YGGVP FLD+L +AL + V+SNKR ALKV+ GG
Sbjct: 525 VKTSNQPRKTYLSRNLIALLSYGGVPEIFFLDILRNALDDARGVFSNKRNALKVSFNYGG 584
Query: 181 VDDDSTAARMISSGVPLSEPHLQDRLSKLVNVER 282
+D D T+ARMI SG+ L EP+LQ RLS L+ E+
Sbjct: 585 MDYDFTSARMILSGISLDEPYLQHRLSILMKEEK 618
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 103 bits (256), Expect = 3e-20
Identities = 54/94 (57%), Positives = 69/94 (73%)
Frame = +1
Query: 1 VAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRAALKVAIINGG 180
V SN+PR+TYLS+ L+ALL YGGVP FLD+L +AL + V+SNKR ALKV+ GG
Sbjct: 527 VKTSNQPRKTYLSRNLIALLSYGGVPEIFFLDILRNALDDARGVFSNKRNALKVSFNYGG 586
Query: 181 VDDDSTAARMISSGVPLSEPHLQDRLSKLVNVER 282
+D D T+ARMI SG+ L EP+LQ RLS L+ E+
Sbjct: 587 MDYDFTSARMILSGISLDEPYLQHRLSILMKEEK 620
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 99.0 bits (245), Expect = 6e-19
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +1
Query: 1 VAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRAALKVAIINGG 180
V SN PRRT LSK LVALL YGG+P FLD+L++ L+E++ ++ NK AAL VA +N G
Sbjct: 497 VTTSNPPRRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKHAALNVA-LNYG 555
Query: 181 VDDDSTAARMISSGVPLSEPHLQDRLSKLVNVER 282
DD AA+MI G+PL EPHL++ LS L+ E+
Sbjct: 556 EMDDQNAAQMILVGIPLDEPHLKNHLSILLKTEK 589
>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
sativus]
Length = 1056
Score = 97.8 bits (242), Expect = 1e-18
Identities = 50/94 (53%), Positives = 71/94 (75%)
Frame = +1
Query: 1 VAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRAALKVAIINGG 180
V SN P+RT+LS+ L+ALL YGGVPR F+++L+ AL++ + V+S+KRAAL+V+I NG
Sbjct: 572 VGTSNPPKRTFLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGE 631
Query: 181 VDDDSTAARMISSGVPLSEPHLQDRLSKLVNVER 282
+ DD ARMI +G+PL E +LQ RLS L+ E+
Sbjct: 632 M-DDFLVARMILAGIPLDESYLQYRLSVLLKEEK 664
>ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana]
gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 5;
Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA
polymerase 5 [Arabidopsis thaliana]
Length = 977
Score = 97.4 bits (241), Expect = 2e-18
Identities = 50/94 (53%), Positives = 67/94 (71%)
Frame = +1
Query: 1 VAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRAALKVAIINGG 180
V SN P+RT LSK LVALL YGG+P FLD+L++ L+E++ ++ NKRAAL A +N G
Sbjct: 493 VTTSNPPKRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAA-LNYG 551
Query: 181 VDDDSTAARMISSGVPLSEPHLQDRLSKLVNVER 282
DD AA+MI G+PL EPHL++ LS L+ E+
Sbjct: 552 EMDDQNAAQMILVGIPLDEPHLKNYLSILLKTEK 585
>gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus notabilis]
Length = 521
Score = 96.7 bits (239), Expect = 3e-18
Identities = 49/90 (54%), Positives = 66/90 (73%)
Frame = +1
Query: 13 NKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRAALKVAIINGGVDDD 192
N P++T LS+ L+ALL +GGVP + F LL +AL+E+ +++KR A++VAI G +DDD
Sbjct: 21 NPPKKTCLSRCLIALLSHGGVPDDYFKGLLWNALRESHGAFNDKRTAIRVAINRGSIDDD 80
Query: 193 STAARMISSGVPLSEPHLQDRLSKLVNVER 282
ST ARMI SG+PL EP+LQ RL LV ER
Sbjct: 81 STVARMILSGIPLEEPYLQHRLFVLVKEER 110
>ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutrema salsugineum]
gi|557110063|gb|ESQ50360.1| hypothetical protein
EUTSA_v10001896mg [Eutrema salsugineum]
Length = 988
Score = 95.9 bits (237), Expect = 5e-18
Identities = 50/94 (53%), Positives = 67/94 (71%)
Frame = +1
Query: 1 VAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRAALKVAIINGG 180
V SN P RT LS+ LVALL YGGVP + FLD+L + L+ ++ ++ NKR+ALK A +N G
Sbjct: 487 VNTSNPPNRTKLSRNLVALLSYGGVPNDFFLDILRNTLENSKTIFQNKRSALKAA-LNYG 545
Query: 181 VDDDSTAARMISSGVPLSEPHLQDRLSKLVNVER 282
DD AA+MI G+PL EPHL+D LS L++ E+
Sbjct: 546 DMDDQNAAQMILVGIPLDEPHLKDHLSILLHTEK 579
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 95.9 bits (237), Expect = 5e-18
Identities = 51/91 (56%), Positives = 66/91 (72%)
Frame = +1
Query: 10 SNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRAALKVAIINGGVDD 189
SN+PRR+YLSKYL+ALL YGGVP F++LL AL++ V S+KRAAL+V++ G + D
Sbjct: 447 SNQPRRSYLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEM-D 505
Query: 190 DSTAARMISSGVPLSEPHLQDRLSKLVNVER 282
DS RMI SG+P+ EP L LS +VN ER
Sbjct: 506 DSIVTRMILSGIPIDEPFLHHCLSFMVNEER 536
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 95.9 bits (237), Expect = 5e-18
Identities = 51/91 (56%), Positives = 66/91 (72%)
Frame = +1
Query: 10 SNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRAALKVAIINGGVDD 189
SN+PRR+YLSKYL+ALL YGGVP F++LL AL++ V S+KRAAL+V++ G + D
Sbjct: 461 SNQPRRSYLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEM-D 519
Query: 190 DSTAARMISSGVPLSEPHLQDRLSKLVNVER 282
DS RMI SG+P+ EP L LS +VN ER
Sbjct: 520 DSIVTRMILSGIPIDEPFLHHCLSFMVNEER 550
>ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine
max]
Length = 988
Score = 95.5 bits (236), Expect = 6e-18
Identities = 50/96 (52%), Positives = 65/96 (67%)
Frame = +1
Query: 1 VAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRAALKVAIINGG 180
V SNKP+R YLSK+L+ALL +GGVP F+DLL S +++ VYSNKR+AL+ A IN G
Sbjct: 501 VTTSNKPKRGYLSKHLIALLSFGGVPNEFFMDLLRSNMEDANHVYSNKRSALR-ASINCG 559
Query: 181 VDDDSTAARMISSGVPLSEPHLQDRLSKLVNVERTK 288
D+ AA MI G+PL EP L+ LS+ E+ K
Sbjct: 560 EKDEYNAAEMILCGIPLDEPFLKHHLSRFAREEKKK 595
>ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cicer
arietinum]
Length = 997
Score = 95.1 bits (235), Expect = 8e-18
Identities = 52/96 (54%), Positives = 65/96 (67%)
Frame = +1
Query: 1 VAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRAALKVAIINGG 180
V S+KP R YLSKYL+ALL YG VP F+D+L S L++ +Y+NKRAAL+ A +N
Sbjct: 511 VNTSHKPNRAYLSKYLIALLSYGRVPNEFFMDVLKSNLEDAGHIYTNKRAALR-ASLNYA 569
Query: 181 VDDDSTAARMISSGVPLSEPHLQDRLSKLVNVERTK 288
DD AA MI G+PL EP LQ LSKLV +E+ K
Sbjct: 570 EMDDFNAAGMILCGIPLDEPFLQHYLSKLVKLEKNK 605
>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 1110
Score = 90.5 bits (223), Expect = 2e-16
Identities = 49/91 (53%), Positives = 63/91 (69%)
Frame = +1
Query: 10 SNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRAALKVAIINGGVDD 189
S KPR TYLS+ L+ALL YGGVP F D+L + L+ET+ +YS++ ALKVA+ + DD
Sbjct: 614 SLKPRNTYLSRTLIALLTYGGVPVEYFYDILNNTLEETQRLYSDEVTALKVAVNHRDRDD 673
Query: 190 DSTAARMISSGVPLSEPHLQDRLSKLVNVER 282
STA MI +GVPL+EP+L LS L ER
Sbjct: 674 ASTATSMIMAGVPLTEPYLWCCLSSLAKEER 704
>ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 759
Score = 90.5 bits (223), Expect = 2e-16
Identities = 49/91 (53%), Positives = 63/91 (69%)
Frame = +1
Query: 10 SNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRAALKVAIINGGVDD 189
S KPR TYLS+ L+ALL YGGVP F D+L + L+ET+ +YS++ ALKVA+ + DD
Sbjct: 558 SLKPRNTYLSRTLIALLTYGGVPVEYFYDILNNTLEETQRLYSDEVTALKVAVNHRDRDD 617
Query: 190 DSTAARMISSGVPLSEPHLQDRLSKLVNVER 282
STA MI +GVPL+EP+L LS L ER
Sbjct: 618 ASTATSMIMAGVPLTEPYLWCCLSSLAKEER 648
>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334280|gb|ERP58267.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 877
Score = 89.0 bits (219), Expect = 6e-16
Identities = 46/94 (48%), Positives = 66/94 (70%)
Frame = +1
Query: 1 VAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRAALKVAIINGG 180
V S++P++T+LSK L+ALL YGGVP F+ ++ +AL++ + SNK AAL+VA +N G
Sbjct: 391 VGTSSRPKKTFLSKNLIALLSYGGVPEEFFMGIVNNALEDAHGILSNKNAALRVA-LNYG 449
Query: 181 VDDDSTAARMISSGVPLSEPHLQDRLSKLVNVER 282
DD+ A MI G+PL EP+LQ RLS L+ E+
Sbjct: 450 DMDDNIVATMIGCGIPLEEPYLQCRLSILMKEEK 483
>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334279|gb|ERP58266.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 899
Score = 89.0 bits (219), Expect = 6e-16
Identities = 46/94 (48%), Positives = 66/94 (70%)
Frame = +1
Query: 1 VAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRAALKVAIINGG 180
V S++P++T+LSK L+ALL YGGVP F+ ++ +AL++ + SNK AAL+VA +N G
Sbjct: 413 VGTSSRPKKTFLSKNLIALLSYGGVPEEFFMGIVNNALEDAHGILSNKNAALRVA-LNYG 471
Query: 181 VDDDSTAARMISSGVPLSEPHLQDRLSKLVNVER 282
DD+ A MI G+PL EP+LQ RLS L+ E+
Sbjct: 472 DMDDNIVATMIGCGIPLEEPYLQCRLSILMKEEK 505
>ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Capsella rubella]
gi|482565607|gb|EOA29796.1| hypothetical protein
CARUB_v10012890mg [Capsella rubella]
Length = 998
Score = 89.0 bits (219), Expect = 6e-16
Identities = 46/94 (48%), Positives = 66/94 (70%)
Frame = +1
Query: 1 VAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRAALKVAIINGG 180
V SN P+ T LS+ L+ALL YGGVP + FL++L L+E++ ++ ++RAA+K AI G
Sbjct: 510 VNTSNPPKMTRLSRNLIALLSYGGVPNDFFLNILRKTLEESKTIFYSERAAIKAAINYGD 569
Query: 181 VDDDSTAARMISSGVPLSEPHLQDRLSKLVNVER 282
+DD +T A MI +PL EPHL+DRLS L+ E+
Sbjct: 570 MDDQNT-AEMILVDIPLDEPHLKDRLSILLKTEK 602
>gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial [Phaseolus
vulgaris]
Length = 689
Score = 87.4 bits (215), Expect = 2e-15
Identities = 52/96 (54%), Positives = 60/96 (62%)
Frame = +1
Query: 1 VAVSNKPRRTYLSKYLVALLYYGGVPRNVFLDLLISALQETEMVYSNKRAALKVAIINGG 180
V S KP RTYLSK L+ALL YGGVP F LL S L+E V+SNKR AL+ A +N G
Sbjct: 487 VNTSIKPNRTYLSKNLIALLSYGGVPNEFFKSLLESNLEEANHVFSNKRVALR-ASVNHG 545
Query: 181 VDDDSTAARMISSGVPLSEPHLQDRLSKLVNVERTK 288
D+ AA MI G+P EP LQ RLS L E+ K
Sbjct: 546 NMDEYNAAGMILCGIPQDEPFLQYRLSILAREEKKK 581