BLASTX nr result

ID: Rauwolfia21_contig00021646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00021646
         (416 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme...   197   1e-48
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme...   197   1e-48
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme...   189   4e-46
emb|CBI28010.3| unnamed protein product [Vitis vinifera]              186   3e-45
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   186   3e-45
ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A...   184   1e-44
ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Caps...   183   2e-44
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu...   181   7e-44
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu...   181   7e-44
ref|XP_002336366.1| rna-dependent RNA polymerase [Populus tricho...   181   7e-44
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu...   180   2e-43
gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus no...   179   3e-43
ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr...   177   1e-42
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...   177   1e-42
ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Caps...   176   3e-42
ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabid...   176   3e-42
ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid...   176   3e-42
gb|AAC62123.1| hypothetical protein [Arabidopsis thaliana]            176   3e-42
gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana]            176   3e-42
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr...   174   1e-41

>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           tuberosum]
          Length = 911

 Score =  197 bits (501), Expect = 1e-48
 Identities = 94/137 (68%), Positives = 113/137 (82%)
 Frame = -3

Query: 411 VERTKLKEGKLPISESFYLMGTADPTSLYLMGKADPTGVLKSNEVCVILDNGPISGKVLV 232
           +ERTKL+ GKLPIS+SFYLMGTADP           TGVL+SNEVCVILDNG ISG+VLV
Sbjct: 619 IERTKLRGGKLPISDSFYLMGTADP-----------TGVLESNEVCVILDNGQISGRVLV 667

Query: 231 YRNPGLHFGDIHILEAVYVKELEDIIGNAKYGIFFSTKGQRSAAAEIANGDFDGDVYWVS 52
           YRNPGLHFGD+H+++A YV+EL D++G+AKYGIFFSTKG RSAA EIANGDFDGD+YWVS
Sbjct: 668 YRNPGLHFGDVHVMKARYVEELADVVGDAKYGIFFSTKGPRSAATEIANGDFDGDMYWVS 727

Query: 51  RNPQLLKYFRASEPWTR 1
            N +++  +  S PW+R
Sbjct: 728 INRKVVDSYTTSRPWSR 744


>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           lycopersicum]
          Length = 1011

 Score =  197 bits (501), Expect = 1e-48
 Identities = 94/137 (68%), Positives = 112/137 (81%)
 Frame = -3

Query: 411 VERTKLKEGKLPISESFYLMGTADPTSLYLMGKADPTGVLKSNEVCVILDNGPISGKVLV 232
           +ERTKL+ GKLPIS+SFYLMGTADP           TGVL+SNEVCVILDNG +SG+VLV
Sbjct: 617 IERTKLRGGKLPISDSFYLMGTADP-----------TGVLESNEVCVILDNGQVSGRVLV 665

Query: 231 YRNPGLHFGDIHILEAVYVKELEDIIGNAKYGIFFSTKGQRSAAAEIANGDFDGDVYWVS 52
           YRNPGLHFGD+H+++A YV+EL D++G+AKYGIFFSTKG RSAA EIANGDFDGD+YWVS
Sbjct: 666 YRNPGLHFGDVHVMKARYVEELADVVGDAKYGIFFSTKGPRSAATEIANGDFDGDMYWVS 725

Query: 51  RNPQLLKYFRASEPWTR 1
            N +L+  +  S PW R
Sbjct: 726 INRKLVDSYTTSRPWIR 742


>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
            tuberosum]
          Length = 1110

 Score =  189 bits (479), Expect = 4e-46
 Identities = 95/136 (69%), Positives = 106/136 (77%)
 Frame = -3

Query: 408  ERTKLKEGKLPISESFYLMGTADPTSLYLMGKADPTGVLKSNEVCVILDNGPISGKVLVY 229
            ER  LK G+LPI+++FYLMGTADPT             L  +EVCVIL++G I G+VLVY
Sbjct: 703  ERNGLKGGRLPIADTFYLMGTADPTD-----------TLNPHEVCVILEHGQIFGEVLVY 751

Query: 228  RNPGLHFGDIHILEAVYVKELEDIIGNAKYGIFFSTKGQRSAAAEIANGDFDGDVYWVSR 49
            RNPGLHFGDIH L AV VK L DI+GNAKYGIFFSTKG RSAA EIANGDFDGD YWVS+
Sbjct: 752  RNPGLHFGDIHRLLAVPVKNLGDIVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWVSQ 811

Query: 48   NPQLLKYFRASEPWTR 1
            NPQLLKYF AS PW+R
Sbjct: 812  NPQLLKYFTASRPWSR 827


>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  186 bits (472), Expect = 3e-45
 Identities = 88/138 (63%), Positives = 106/138 (76%)
 Frame = -3

Query: 414 NVERTKLKEGKLPISESFYLMGTADPTSLYLMGKADPTGVLKSNEVCVILDNGPISGKVL 235
           N ER  L+ GKLP+++ FYLMGTADP           TG LKS+EVC+ILD+G + G+VL
Sbjct: 533 NEERKGLRVGKLPVNDCFYLMGTADP-----------TGTLKSDEVCIILDHGQVQGRVL 581

Query: 234 VYRNPGLHFGDIHILEAVYVKELEDIIGNAKYGIFFSTKGQRSAAAEIANGDFDGDVYWV 55
           VY++PGLHFGDIH+L A YV+ LE+ +GNAKY IFF  KG RS A E+AN DFDGD+YWV
Sbjct: 582 VYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMYWV 641

Query: 54  SRNPQLLKYFRASEPWTR 1
           SRN QLL+YFRASEPW R
Sbjct: 642 SRNQQLLQYFRASEPWMR 659


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
           vinifera]
          Length = 943

 Score =  186 bits (472), Expect = 3e-45
 Identities = 88/138 (63%), Positives = 106/138 (76%)
 Frame = -3

Query: 414 NVERTKLKEGKLPISESFYLMGTADPTSLYLMGKADPTGVLKSNEVCVILDNGPISGKVL 235
           N ER  L+ GKLP+++ FYLMGTADP           TG LKS+EVC+ILD+G + G+VL
Sbjct: 547 NEERKGLRVGKLPVNDCFYLMGTADP-----------TGTLKSDEVCIILDHGQVQGRVL 595

Query: 234 VYRNPGLHFGDIHILEAVYVKELEDIIGNAKYGIFFSTKGQRSAAAEIANGDFDGDVYWV 55
           VY++PGLHFGDIH+L A YV+ LE+ +GNAKY IFF  KG RS A E+AN DFDGD+YWV
Sbjct: 596 VYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMYWV 655

Query: 54  SRNPQLLKYFRASEPWTR 1
           SRN QLL+YFRASEPW R
Sbjct: 656 SRNQQLLQYFRASEPWMR 673


>ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
           gi|548857326|gb|ERN15132.1| hypothetical protein
           AMTR_s00056p00110240 [Amborella trichopoda]
          Length = 988

 Score =  184 bits (466), Expect = 1e-44
 Identities = 87/136 (63%), Positives = 105/136 (77%)
 Frame = -3

Query: 408 ERTKLKEGKLPISESFYLMGTADPTSLYLMGKADPTGVLKSNEVCVILDNGPISGKVLVY 229
           ER  LKEGK+ +  S+YLMGTADP           TG LK NEVC+ILD+G ISGKVLVY
Sbjct: 597 ERKGLKEGKVLLPNSYYLMGTADP-----------TGKLKGNEVCIILDHGQISGKVLVY 645

Query: 228 RNPGLHFGDIHILEAVYVKELEDIIGNAKYGIFFSTKGQRSAAAEIANGDFDGDVYWVSR 49
           R+PGLHFGDIH+  A Y+++L +I+GNAK+ IFFST+G RSAA EIANGDFDGD+YW+S 
Sbjct: 646 RHPGLHFGDIHVFTATYIEDLVEIVGNAKFAIFFSTQGPRSAADEIANGDFDGDMYWIST 705

Query: 48  NPQLLKYFRASEPWTR 1
           NP+LL YF+A  PW R
Sbjct: 706 NPELLHYFKAGPPWER 721


>ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Capsella rubella]
           gi|482565607|gb|EOA29796.1| hypothetical protein
           CARUB_v10012890mg [Capsella rubella]
          Length = 998

 Score =  183 bits (464), Expect = 2e-44
 Identities = 87/134 (64%), Positives = 102/134 (76%)
 Frame = -3

Query: 408 ERTKLKEGKLPISESFYLMGTADPTSLYLMGKADPTGVLKSNEVCVILDNGPISGKVLVY 229
           E+  LKEG+LPI ES+YLMGT DPT           G LK NEVCVIL+ G ISG VLVY
Sbjct: 601 EKNALKEGRLPIGESYYLMGTVDPT-----------GELKENEVCVILETGQISGNVLVY 649

Query: 228 RNPGLHFGDIHILEAVYVKELEDIIGNAKYGIFFSTKGQRSAAAEIANGDFDGDVYWVSR 49
           RNPGLHFGDIH+L+A YVK LED +GN+KY +FF  KG RS   EIA GDFDGD+Y++SR
Sbjct: 650 RNPGLHFGDIHVLKATYVKALEDYVGNSKYAVFFPQKGPRSLGDEIAGGDFDGDMYFISR 709

Query: 48  NPQLLKYFRASEPW 7
           NPQLL++F+ SEPW
Sbjct: 710 NPQLLEHFKPSEPW 723


>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
           gi|550334280|gb|ERP58267.1| hypothetical protein
           POPTR_0007s06560g [Populus trichocarpa]
          Length = 877

 Score =  181 bits (460), Expect = 7e-44
 Identities = 86/135 (63%), Positives = 107/135 (79%)
 Frame = -3

Query: 408 ERTKLKEGKLPISESFYLMGTADPTSLYLMGKADPTGVLKSNEVCVILDNGPISGKVLVY 229
           E+  LK GK+P+ ES+YLMGTADP           TG+L+S+EVC+ILD G ISG+VL+Y
Sbjct: 482 EKKSLKGGKIPVPESYYLMGTADP-----------TGLLESDEVCIILDCGQISGEVLIY 530

Query: 228 RNPGLHFGDIHILEAVYVKELEDIIGNAKYGIFFSTKGQRSAAAEIANGDFDGDVYWVSR 49
           RNPGLHFGDIHIL+A YV+ELED +GNAKY IFF  KG RS A E++ GDFDGD+++VSR
Sbjct: 531 RNPGLHFGDIHILKATYVRELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFVSR 590

Query: 48  NPQLLKYFRASEPWT 4
           NPQLL+ F+ +EPWT
Sbjct: 591 NPQLLETFKQTEPWT 605


>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
           gi|550334279|gb|ERP58266.1| hypothetical protein
           POPTR_0007s06560g [Populus trichocarpa]
          Length = 899

 Score =  181 bits (460), Expect = 7e-44
 Identities = 86/135 (63%), Positives = 107/135 (79%)
 Frame = -3

Query: 408 ERTKLKEGKLPISESFYLMGTADPTSLYLMGKADPTGVLKSNEVCVILDNGPISGKVLVY 229
           E+  LK GK+P+ ES+YLMGTADP           TG+L+S+EVC+ILD G ISG+VL+Y
Sbjct: 504 EKKSLKGGKIPVPESYYLMGTADP-----------TGLLESDEVCIILDCGQISGEVLIY 552

Query: 228 RNPGLHFGDIHILEAVYVKELEDIIGNAKYGIFFSTKGQRSAAAEIANGDFDGDVYWVSR 49
           RNPGLHFGDIHIL+A YV+ELED +GNAKY IFF  KG RS A E++ GDFDGD+++VSR
Sbjct: 553 RNPGLHFGDIHILKATYVRELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFVSR 612

Query: 48  NPQLLKYFRASEPWT 4
           NPQLL+ F+ +EPWT
Sbjct: 613 NPQLLETFKQTEPWT 627


>ref|XP_002336366.1| rna-dependent RNA polymerase [Populus trichocarpa]
          Length = 320

 Score =  181 bits (460), Expect = 7e-44
 Identities = 86/135 (63%), Positives = 107/135 (79%)
 Frame = -3

Query: 408 ERTKLKEGKLPISESFYLMGTADPTSLYLMGKADPTGVLKSNEVCVILDNGPISGKVLVY 229
           E+  LK GK+P+ ES+YLMGTADP           TG+L+S+EVC+ILD G ISG+VL+Y
Sbjct: 62  EKKSLKGGKIPVPESYYLMGTADP-----------TGLLESDEVCIILDCGQISGEVLIY 110

Query: 228 RNPGLHFGDIHILEAVYVKELEDIIGNAKYGIFFSTKGQRSAAAEIANGDFDGDVYWVSR 49
           RNPGLHFGDIHIL+A YV+ELED +GNAKY IFF  KG RS A E++ GDFDGD+++VSR
Sbjct: 111 RNPGLHFGDIHILKATYVRELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFVSR 170

Query: 48  NPQLLKYFRASEPWT 4
           NPQLL+ F+ +EPWT
Sbjct: 171 NPQLLETFKQTEPWT 185


>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
           gi|550336519|gb|ERP59562.1| hypothetical protein
           POPTR_0006s17780g [Populus trichocarpa]
          Length = 866

 Score =  180 bits (456), Expect = 2e-43
 Identities = 85/135 (62%), Positives = 107/135 (79%)
 Frame = -3

Query: 408 ERTKLKEGKLPISESFYLMGTADPTSLYLMGKADPTGVLKSNEVCVILDNGPISGKVLVY 229
           E+  LK GK+P+ ES+YLMGTADP           TG+L+S+EVC+ILD G +SG+VLVY
Sbjct: 482 EKKSLKGGKIPVPESYYLMGTADP-----------TGLLESDEVCIILDCGQVSGEVLVY 530

Query: 228 RNPGLHFGDIHILEAVYVKELEDIIGNAKYGIFFSTKGQRSAAAEIANGDFDGDVYWVSR 49
           RNPGLHFGDIHIL+A YV+ELED +GNAKY IFF  KG RS A E++ GDFDGD+++VSR
Sbjct: 531 RNPGLHFGDIHILKATYVRELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFVSR 590

Query: 48  NPQLLKYFRASEPWT 4
           NP+LL+ F+ +EPWT
Sbjct: 591 NPRLLENFKQTEPWT 605


>gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus notabilis]
          Length = 521

 Score =  179 bits (455), Expect = 3e-43
 Identities = 82/136 (60%), Positives = 104/136 (76%)
 Frame = -3

Query: 408 ERTKLKEGKLPISESFYLMGTADPTSLYLMGKADPTGVLKSNEVCVILDNGPISGKVLVY 229
           ER  L+ G+L + + FYLMGTADP           TG L+ +EVC++L NG +SGKVLVY
Sbjct: 109 ERKSLRGGRLHVDDCFYLMGTADP-----------TGKLEHDEVCIVLANGQVSGKVLVY 157

Query: 228 RNPGLHFGDIHILEAVYVKELEDIIGNAKYGIFFSTKGQRSAAAEIANGDFDGDVYWVSR 49
           RNPGLHFGDIH+L+A Y++E+E  +GNAKY IFFS KG RS A E+A GDFDGD++WVSR
Sbjct: 158 RNPGLHFGDIHVLKATYIEEMESFVGNAKYAIFFSKKGPRSIADEMAGGDFDGDMFWVSR 217

Query: 48  NPQLLKYFRASEPWTR 1
           NP+LLKYF+ S+PW +
Sbjct: 218 NPELLKYFKPSDPWIK 233


>ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]
           gi|557110064|gb|ESQ50361.1| hypothetical protein
           EUTSA_v10001897mg [Eutrema salsugineum]
          Length = 988

 Score =  177 bits (449), Expect = 1e-42
 Identities = 82/136 (60%), Positives = 104/136 (76%)
 Frame = -3

Query: 414 NVERTKLKEGKLPISESFYLMGTADPTSLYLMGKADPTGVLKSNEVCVILDNGPISGKVL 235
           N+E+  LK G+LP++ES+YLMGT DPT           G LK +EVCVIL++G ISG VL
Sbjct: 594 NIEKNDLKAGRLPVTESYYLMGTVDPT-----------GELKEDEVCVILESGQISGDVL 642

Query: 234 VYRNPGLHFGDIHILEAVYVKELEDIIGNAKYGIFFSTKGQRSAAAEIANGDFDGDVYWV 55
           VYRNPG+HFGDIH+L+A YVK LE+ +GN+KY +FF  KG RS   EIA GDFDGD+Y++
Sbjct: 643 VYRNPGVHFGDIHVLKATYVKALEEYVGNSKYAVFFPQKGPRSLGDEIAGGDFDGDMYFI 702

Query: 54  SRNPQLLKYFRASEPW 7
           SRNP+LL+ F+ SEPW
Sbjct: 703 SRNPELLEQFKPSEPW 718


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
           RNA polymerase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 981

 Score =  177 bits (449), Expect = 1e-42
 Identities = 83/134 (61%), Positives = 104/134 (77%)
 Frame = -3

Query: 408 ERTKLKEGKLPISESFYLMGTADPTSLYLMGKADPTGVLKSNEVCVILDNGPISGKVLVY 229
           E+  LK G+LP++ES+YLMGT DPT           G LK +EVCVIL++G ISG+VLVY
Sbjct: 588 EKNDLKAGRLPVTESYYLMGTVDPT-----------GELKEDEVCVILESGQISGEVLVY 636

Query: 228 RNPGLHFGDIHILEAVYVKELEDIIGNAKYGIFFSTKGQRSAAAEIANGDFDGDVYWVSR 49
           RNPGLHFGDIHIL+A YVK LE+ +GN+KY +FF  KG RS   EIA GDFDGD+Y++SR
Sbjct: 637 RNPGLHFGDIHILKATYVKALEEYVGNSKYAVFFPQKGPRSLGDEIAGGDFDGDMYFISR 696

Query: 48  NPQLLKYFRASEPW 7
           NP+LL++F+ SEPW
Sbjct: 697 NPELLEHFKPSEPW 710


>ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Capsella rubella]
           gi|482565615|gb|EOA29804.1| hypothetical protein
           CARUB_v10012898mg [Capsella rubella]
          Length = 982

 Score =  176 bits (446), Expect = 3e-42
 Identities = 81/134 (60%), Positives = 104/134 (77%)
 Frame = -3

Query: 408 ERTKLKEGKLPISESFYLMGTADPTSLYLMGKADPTGVLKSNEVCVILDNGPISGKVLVY 229
           E+  LK G+LP++ES+YLMGT DPT           G LK +EVCVIL++G ISG+VLVY
Sbjct: 591 EKNDLKAGRLPVTESYYLMGTVDPT-----------GELKEDEVCVILESGQISGEVLVY 639

Query: 228 RNPGLHFGDIHILEAVYVKELEDIIGNAKYGIFFSTKGQRSAAAEIANGDFDGDVYWVSR 49
           RNPGLHFGDIH+L+A YVK LE+ +GN+K+ +FF  KG RS   EIA GDFDGD+Y++SR
Sbjct: 640 RNPGLHFGDIHVLKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDIYFISR 699

Query: 48  NPQLLKYFRASEPW 7
           NP+LL++F+ SEPW
Sbjct: 700 NPELLEHFKPSEPW 713


>ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabidopsis thaliana]
           gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
           Full=Probable RNA-dependent RNA polymerase 3;
           Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
           3 gi|330251848|gb|AEC06942.1| probable RNA-dependent RNA
           polymerase 3 [Arabidopsis thaliana]
          Length = 992

 Score =  176 bits (446), Expect = 3e-42
 Identities = 83/134 (61%), Positives = 100/134 (74%)
 Frame = -3

Query: 408 ERTKLKEGKLPISESFYLMGTADPTSLYLMGKADPTGVLKSNEVCVILDNGPISGKVLVY 229
           ER  LK G+ PI ES+Y+MGT DPT           G LK NE+CVIL +G ISG VLVY
Sbjct: 595 ERNALKAGRFPIDESYYIMGTVDPT-----------GELKENEICVILHSGQISGDVLVY 643

Query: 228 RNPGLHFGDIHILEAVYVKELEDIIGNAKYGIFFSTKGQRSAAAEIANGDFDGDVYWVSR 49
           RNPGLHFGDIH+L+A YVK LED +GNAK+ +FF  KG RS   EIA GDFDGD+Y++SR
Sbjct: 644 RNPGLHFGDIHVLKATYVKALEDYVGNAKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISR 703

Query: 48  NPQLLKYFRASEPW 7
           NP+LL++F+ SEPW
Sbjct: 704 NPKLLEHFKPSEPW 717


>ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana]
           gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
           Full=Probable RNA-dependent RNA polymerase 5;
           Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
           5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA
           polymerase 5 [Arabidopsis thaliana]
          Length = 977

 Score =  176 bits (446), Expect = 3e-42
 Identities = 83/134 (61%), Positives = 103/134 (76%)
 Frame = -3

Query: 408 ERTKLKEGKLPISESFYLMGTADPTSLYLMGKADPTGVLKSNEVCVILDNGPISGKVLVY 229
           E+  LK GKLP++ES+YLMGT DPT           G LK +EVCVIL++G ISG+VLVY
Sbjct: 584 EKNDLKAGKLPVTESYYLMGTVDPT-----------GALKEDEVCVILESGQISGEVLVY 632

Query: 228 RNPGLHFGDIHILEAVYVKELEDIIGNAKYGIFFSTKGQRSAAAEIANGDFDGDVYWVSR 49
           RNPGLHFGDIHIL+A YVK LE+ +GN+K+ +FF  KG RS   EIA GDFDGD+Y++SR
Sbjct: 633 RNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISR 692

Query: 48  NPQLLKYFRASEPW 7
           NP+LL+ F+ SEPW
Sbjct: 693 NPELLENFKPSEPW 706


>gb|AAC62123.1| hypothetical protein [Arabidopsis thaliana]
          Length = 929

 Score =  176 bits (446), Expect = 3e-42
 Identities = 83/134 (61%), Positives = 103/134 (76%)
 Frame = -3

Query: 408 ERTKLKEGKLPISESFYLMGTADPTSLYLMGKADPTGVLKSNEVCVILDNGPISGKVLVY 229
           E+  LK GKLP++ES+YLMGT DPT           G LK +EVCVIL++G ISG+VLVY
Sbjct: 504 EKNDLKAGKLPVTESYYLMGTVDPT-----------GALKEDEVCVILESGQISGEVLVY 552

Query: 228 RNPGLHFGDIHILEAVYVKELEDIIGNAKYGIFFSTKGQRSAAAEIANGDFDGDVYWVSR 49
           RNPGLHFGDIHIL+A YVK LE+ +GN+K+ +FF  KG RS   EIA GDFDGD+Y++SR
Sbjct: 553 RNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISR 612

Query: 48  NPQLLKYFRASEPW 7
           NP+LL+ F+ SEPW
Sbjct: 613 NPELLENFKPSEPW 626


>gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana]
          Length = 966

 Score =  176 bits (446), Expect = 3e-42
 Identities = 83/134 (61%), Positives = 100/134 (74%)
 Frame = -3

Query: 408 ERTKLKEGKLPISESFYLMGTADPTSLYLMGKADPTGVLKSNEVCVILDNGPISGKVLVY 229
           ER  LK G+ PI ES+Y+MGT DPT           G LK NE+CVIL +G ISG VLVY
Sbjct: 569 ERNALKAGRFPIDESYYIMGTVDPT-----------GELKENEICVILHSGQISGDVLVY 617

Query: 228 RNPGLHFGDIHILEAVYVKELEDIIGNAKYGIFFSTKGQRSAAAEIANGDFDGDVYWVSR 49
           RNPGLHFGDIH+L+A YVK LED +GNAK+ +FF  KG RS   EIA GDFDGD+Y++SR
Sbjct: 618 RNPGLHFGDIHVLKATYVKALEDYVGNAKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISR 677

Query: 48  NPQLLKYFRASEPW 7
           NP+LL++F+ SEPW
Sbjct: 678 NPKLLEHFKPSEPW 691


>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
           gi|568843311|ref|XP_006475557.1| PREDICTED: probable
           RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
           sinensis] gi|557554498|gb|ESR64512.1| hypothetical
           protein CICLE_v10007331mg [Citrus clementina]
          Length = 1013

 Score =  174 bits (441), Expect = 1e-41
 Identities = 85/135 (62%), Positives = 103/135 (76%), Gaps = 1/135 (0%)
 Frame = -3

Query: 408 ERTKLKEGKLPISESFYLMGTADPTSLYLMGKADPTGVLKSNEVCVILDNGPISG-KVLV 232
           E+  L+ GKLP++ES+YLMGT DPT           G+LKSNEVC+IL +G +S  KVLV
Sbjct: 617 EKKSLQAGKLPVTESYYLMGTVDPT-----------GILKSNEVCIILKDGQVSWEKVLV 665

Query: 231 YRNPGLHFGDIHILEAVYVKELEDIIGNAKYGIFFSTKGQRSAAAEIANGDFDGDVYWVS 52
           YRNPGLHFGDIH+L+A YVKELED +G +KY IFF   G RS A EIA GDFDGD+Y+VS
Sbjct: 666 YRNPGLHFGDIHVLKATYVKELEDFVGTSKYAIFFPCNGPRSLADEIAGGDFDGDMYFVS 725

Query: 51  RNPQLLKYFRASEPW 7
           RNP+LLK+F+ SE W
Sbjct: 726 RNPELLKHFKESERW 740


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