BLASTX nr result
ID: Rauwolfia21_contig00021581
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00021581
(449 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB36255.1| RNA-binding protein 40 [Morus notabilis] 57 2e-06
ref|XP_002525464.1| RNA binding protein, putative [Ricinus commu... 57 3e-06
ref|NP_172394.1| RNA-binding (RRM/RBD/RNP motifs) family protein... 57 3e-06
ref|XP_006605188.1| PREDICTED: RNA-binding protein 40-like [Glyc... 57 3e-06
ref|XP_003548764.1| PREDICTED: RNA-binding protein 40-like [Glyc... 57 3e-06
ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Viti... 57 3e-06
ref|XP_006479054.1| PREDICTED: RNA-binding protein 40-like isofo... 56 4e-06
ref|XP_006443354.1| hypothetical protein CICLE_v10020067mg [Citr... 56 4e-06
ref|XP_002892494.1| RNA recognition motif-containing protein [Ar... 56 4e-06
gb|EMJ08652.1| hypothetical protein PRUPE_ppa005530mg [Prunus pe... 56 6e-06
gb|EOY10724.1| RNA-binding family protein isoform 5 [Theobroma c... 55 7e-06
gb|EOY10720.1| RNA-binding family protein isoform 1 [Theobroma c... 55 7e-06
ref|XP_004230890.1| PREDICTED: RNA-binding protein 40-like isofo... 55 7e-06
ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ... 55 7e-06
emb|CBI36672.3| unnamed protein product [Vitis vinifera] 55 7e-06
>gb|EXB36255.1| RNA-binding protein 40 [Morus notabilis]
Length = 486
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +1
Query: 340 SIVGICYFQEGRMRGQAFVTFPSIELAHDALNLVNG 447
S + + QEGRMRGQAFVTFPS+ELAH ALNLVNG
Sbjct: 427 SSLNVKLMQEGRMRGQAFVTFPSVELAHHALNLVNG 462
>ref|XP_002525464.1| RNA binding protein, putative [Ricinus communis]
gi|223535277|gb|EEF36954.1| RNA binding protein,
putative [Ricinus communis]
Length = 450
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +1
Query: 364 QEGRMRGQAFVTFPSIELAHDALNLVNG 447
QEGRMRGQAFVTFPS+ELAH ALNLVNG
Sbjct: 401 QEGRMRGQAFVTFPSVELAHQALNLVNG 428
>ref|NP_172394.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana] gi|20258828|gb|AAM13896.1| unknown protein
[Arabidopsis thaliana] gi|21689717|gb|AAM67480.1|
unknown protein [Arabidopsis thaliana]
gi|332190295|gb|AEE28416.1| RNA-binding (RRM/RBD/RNP
motifs) family protein [Arabidopsis thaliana]
Length = 442
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +1
Query: 340 SIVGICYFQEGRMRGQAFVTFPSIELAHDALNLVNG 447
S +G+ QEGRMRGQAF+TFPS+E+AH ALNLVNG
Sbjct: 384 SSLGVRLMQEGRMRGQAFLTFPSVEVAHRALNLVNG 419
>ref|XP_006605188.1| PREDICTED: RNA-binding protein 40-like [Glycine max]
Length = 453
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +1
Query: 364 QEGRMRGQAFVTFPSIELAHDALNLVNG 447
QEGRMRGQAF+TFPSIELAH ALNLVNG
Sbjct: 417 QEGRMRGQAFITFPSIELAHHALNLVNG 444
>ref|XP_003548764.1| PREDICTED: RNA-binding protein 40-like [Glycine max]
Length = 456
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +1
Query: 364 QEGRMRGQAFVTFPSIELAHDALNLVNG 447
QEGRMRGQAF+TFPSIELAH ALNLVNG
Sbjct: 407 QEGRMRGQAFITFPSIELAHHALNLVNG 434
>ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Vitis vinifera]
gi|298205172|emb|CBI17231.3| unnamed protein product
[Vitis vinifera]
Length = 463
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +1
Query: 364 QEGRMRGQAFVTFPSIELAHDALNLVNG 447
QEGRMRGQAFVTFPS+ELAH ALNLVNG
Sbjct: 414 QEGRMRGQAFVTFPSVELAHHALNLVNG 441
>ref|XP_006479054.1| PREDICTED: RNA-binding protein 40-like isoform X2 [Citrus sinensis]
Length = 389
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +1
Query: 364 QEGRMRGQAFVTFPSIELAHDALNLVNG 447
QEGRMRGQAFVTFPS+ELAH ALNLVNG
Sbjct: 340 QEGRMRGQAFVTFPSVELAHRALNLVNG 367
>ref|XP_006443354.1| hypothetical protein CICLE_v10020067mg [Citrus clementina]
gi|567901734|ref|XP_006443355.1| hypothetical protein
CICLE_v10020067mg [Citrus clementina]
gi|568850729|ref|XP_006479053.1| PREDICTED: RNA-binding
protein 40-like isoform X1 [Citrus sinensis]
gi|557545616|gb|ESR56594.1| hypothetical protein
CICLE_v10020067mg [Citrus clementina]
gi|557545617|gb|ESR56595.1| hypothetical protein
CICLE_v10020067mg [Citrus clementina]
Length = 461
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +1
Query: 364 QEGRMRGQAFVTFPSIELAHDALNLVNG 447
QEGRMRGQAFVTFPS+ELAH ALNLVNG
Sbjct: 412 QEGRMRGQAFVTFPSVELAHRALNLVNG 439
>ref|XP_002892494.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297338336|gb|EFH68753.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 438
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +1
Query: 346 VGICYFQEGRMRGQAFVTFPSIELAHDALNLVNG 447
+G+ QEGRMRGQAF+TFPS+E+AH ALNLVNG
Sbjct: 382 LGVRLMQEGRMRGQAFLTFPSVEVAHRALNLVNG 415
>gb|EMJ08652.1| hypothetical protein PRUPE_ppa005530mg [Prunus persica]
Length = 456
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +1
Query: 364 QEGRMRGQAFVTFPSIELAHDALNLVNG 447
QEGRMRGQAFVTFPS+ELAH ALNLVNG
Sbjct: 407 QEGRMRGQAFVTFPSVELAHYALNLVNG 434
>gb|EOY10724.1| RNA-binding family protein isoform 5 [Theobroma cacao]
Length = 345
Score = 55.5 bits (132), Expect = 7e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +1
Query: 364 QEGRMRGQAFVTFPSIELAHDALNLVNG 447
QEGRMRGQAFVTFP++ELAH ALNLVNG
Sbjct: 296 QEGRMRGQAFVTFPAVELAHHALNLVNG 323
>gb|EOY10720.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508718824|gb|EOY10721.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508718825|gb|EOY10722.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 479
Score = 55.5 bits (132), Expect = 7e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +1
Query: 364 QEGRMRGQAFVTFPSIELAHDALNLVNG 447
QEGRMRGQAFVTFP++ELAH ALNLVNG
Sbjct: 430 QEGRMRGQAFVTFPAVELAHHALNLVNG 457
>ref|XP_004230890.1| PREDICTED: RNA-binding protein 40-like isoform 1 [Solanum
lycopersicum]
Length = 448
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +1
Query: 340 SIVGICYFQEGRMRGQAFVTFPSIELAHDALNLVNG 447
S + + QEGRMRGQAFVTFPSIELA +ALNLVNG
Sbjct: 391 SSLAVKLMQEGRMRGQAFVTFPSIELAQNALNLVNG 426
>ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 40-like [Vitis
vinifera]
Length = 463
Score = 55.5 bits (132), Expect = 7e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +1
Query: 364 QEGRMRGQAFVTFPSIELAHDALNLVNG 447
QEGRMRGQAFVTFPS+ELAH ALN+VNG
Sbjct: 414 QEGRMRGQAFVTFPSVELAHHALNVVNG 441
>emb|CBI36672.3| unnamed protein product [Vitis vinifera]
Length = 263
Score = 55.5 bits (132), Expect = 7e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +1
Query: 364 QEGRMRGQAFVTFPSIELAHDALNLVNG 447
QEGRMRGQAFVTFPS+ELAH ALN+VNG
Sbjct: 214 QEGRMRGQAFVTFPSVELAHHALNVVNG 241