BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00020904
         (1544 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi...   752   0.0  
ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containi...   752   0.0  
gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis]     739   0.0  
gb|EMJ15466.1| hypothetical protein PRUPE_ppa025121mg [Prunus pe...   736   0.0  
gb|EOY27956.1| Pentatricopeptide, putative [Theobroma cacao]          733   0.0  
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi...   726   0.0  
ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, part...   724   0.0  
gb|AHB18405.1| pentatricopeptide repeat-containing protein [Goss...   724   0.0  
ref|XP_004294643.1| PREDICTED: pentatricopeptide repeat-containi...   723   0.0  
gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossyp...   690   0.0  
gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]        684   0.0  
gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossyp...   684   0.0  
gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossyp...   684   0.0  
gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossyp...   684   0.0  
ref|XP_002870024.1| pentatricopeptide repeat-containing protein ...   682   0.0  
ref|XP_006597484.1| PREDICTED: pentatricopeptide repeat-containi...   680   0.0  
ref|XP_006414062.1| hypothetical protein EUTSA_v10024377mg [Eutr...   680   0.0  
ref|XP_004504288.1| PREDICTED: pentatricopeptide repeat-containi...   678   0.0  
ref|XP_006282442.1| hypothetical protein CARUB_v10004110mg [Caps...   676   0.0  
dbj|BAD94843.1| putative protein [Arabidopsis thaliana]               676   0.0  

>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  752 bits (1942), Expect = 0.0
 Identities = 359/514 (69%), Positives = 431/514 (83%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            LATMV V+A CS  G L+L R +H YAIKA F  ++T NN LLD YSK G+++ A+ +F+
Sbjct: 251  LATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFE 310

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
             M ERSVVSWTSMIAGYAR+GLSD ++++F +M K GI  D FT+T+ILHACAC+G LEN
Sbjct: 311  TMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLEN 370

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
            GK+VH+Y+KE  M S LFVSNALMDMYAKCGSM DA +VFS+M  KDI SWNTMIGGYSK
Sbjct: 371  GKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSK 430

Query: 1002 NCLPNEALDSFINMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVA 823
            N LPNEAL+ F+ MQ + +P+ +T+ CILP       L+RG+EIHG+ILR+ FS DR VA
Sbjct: 431  NSLPNEALNLFVEMQYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVA 490

Query: 822  NALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGII 643
            NAL+DMY+KCGA+ +A+L+FD I  KD+VSWT+MIAGYGM+G+GSEAIA F +M+ +GI 
Sbjct: 491  NALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIE 550

Query: 642  PDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            PDEVSF SILYACSHSGLLDEGW F+N+MRN   I PK EHYAC+VDLLARAG L++AYK
Sbjct: 551  PDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYK 610

Query: 462  FIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEAEK 283
            FIK MP++PDATIWGALLCGCRIYH+VKLAEKVA+H+FELEPENTGYY+LLANIYAEAEK
Sbjct: 611  FIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEK 670

Query: 282  WEEVKKMREKIGMRGLKKNPGCSWIEIKGKVYIFVSGDNGLPEARKIQLFLKRLRKRMKE 103
            WEEVKK+RE+IG RGL+KNPGCSWIEIKGKV+IFV+GD+  P A KI+L LK+ R RMKE
Sbjct: 671  WEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKE 730

Query: 102  EGHSPNLTYALINADDREKEISLCGHSEKLAMAF 1
            EGH P + YALI ADD EKE++LCGHSEK+AMAF
Sbjct: 731  EGHFPKMRYALIKADDTEKEMALCGHSEKIAMAF 764



 Score =  207 bits (528), Expect = 7e-51
 Identities = 120/368 (32%), Positives = 194/368 (52%), Gaps = 20/368 (5%)
 Frame = -3

Query: 1446 DSKITFNNSLLDAYSKCGDMHGAVCIFKNMEE------------------RSVVSWTSMI 1321
            + K+   N L++ Y+K G+   ++ +FK M E                  R V+SW SMI
Sbjct: 164  NEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMI 223

Query: 1320 AGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKEVHDYVKERNMG 1141
            +GY   GLS++ + +F  M   GI  D  T+ S++  C+ +G L  G+ +H Y  + + G
Sbjct: 224  SGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFG 283

Query: 1140 SSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCLPNEALDSFINM 961
              L ++N L+DMY+K G++  A  VF  M  + + SW +MI GY++  L + ++  F  M
Sbjct: 284  KELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEM 343

Query: 960  QSH-IRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALMDMYVKCGAM 784
            +   I PD  T+T IL        L+ G+++H YI  ++  SD FV+NALMDMY KCG+M
Sbjct: 344  EKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSM 403

Query: 783  LMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILYAC 604
              A  +F ++  KDIVSW  MI GY      +EA+  F +M Q    P+ ++   IL AC
Sbjct: 404  GDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMACILPAC 462

Query: 603  SHSGLLDEGWRFY-NIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYKFIKRMPVQPDAT 427
            +    L+ G   + +I+RN +++   + +   +VD+  + G L  A      +P + D  
Sbjct: 463  ASLAALERGQEIHGHILRNGFSLDRHVAN--ALVDMYLKCGALGLARLLFDMIP-EKDLV 519

Query: 426  IWGALLCG 403
             W  ++ G
Sbjct: 520  SWTVMIAG 527



 Score = 61.6 bits (148), Expect = 9e-07
 Identities = 52/239 (21%), Positives = 97/239 (40%), Gaps = 59/239 (24%)
 Frame = -3

Query: 882 GREIHGYILRSEFSSDRFVANALMDMYVKCGAMLMAQLIFDKIAS--------------- 748
           GR IH  I  ++   D  + + L+ MYV CG +   + IFDK+A+               
Sbjct: 120 GRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAK 179

Query: 747 ----------------------------------KDIVSWTIMIAGYGMYGFGSEAIATF 670
                                             +D++SW  MI+GY   G   + +  F
Sbjct: 180 IGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLF 239

Query: 669 KDMKQAGIIPDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLAR 490
           + M   GI  D  +  S++  CS++G+L  G R  +    + +   +L    C++D+ ++
Sbjct: 240 EQMLLLGINTDLATMVSVVAGCSNTGMLLLG-RALHGYAIKASFGKELTLNNCLLDMYSK 298

Query: 489 AGKLTEAYKFIKRMPVQPDATIWGALLCG----------CRIYHEVKLAEKVADHIFEL 343
           +G L  A +  + M  +     W +++ G           R++HE++  E ++  IF +
Sbjct: 299 SGNLNSAIQVFETMG-ERSVVSWTSMIAGYAREGLSDMSVRLFHEME-KEGISPDIFTI 355


>ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Citrus sinensis]
          Length = 872

 Score =  752 bits (1941), Expect = 0.0
 Identities = 359/514 (69%), Positives = 427/514 (83%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            LATMV VL+ C+  G LM  R +H +A+KA F  +I+FNN+LLD YSKCGD+ GA+ +F+
Sbjct: 299  LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 358

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
             M ERSVVSWTSMIAGYAR+G+ D AI++FR M + GIE D + +TSILHACAC G LE 
Sbjct: 359  KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 418

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
            GK+VHDY+KE +M SSL+VSNALMDMYAKCGSM DA++VF+QM  KDI SWNTMIGGYSK
Sbjct: 419  GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGGYSK 478

Query: 1002 NCLPNEALDSFINMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVA 823
            N  PNEALD F+ M  +  PD VT+ CILP       L+RGREIHGYILR   S+DR VA
Sbjct: 479  NSCPNEALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 538

Query: 822  NALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGII 643
            NA++DMYVKCG +++A+ +FD I +KD++SWTIMIAGYGM+GFG +AIATF DM+QAGI 
Sbjct: 539  NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 598

Query: 642  PDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            PDEVSF S+LYACSHSGL+DEGWRF+N+MR E NI PKLEHYACMVDLL+R G L+EAY+
Sbjct: 599  PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 658

Query: 462  FIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEAEK 283
            FI+ MPV PDATIWG+LLCGCRI+HEVKLAEKVA+H+FELEP+NTGYY+LLAN+YAEAEK
Sbjct: 659  FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 718

Query: 282  WEEVKKMREKIGMRGLKKNPGCSWIEIKGKVYIFVSGDNGLPEARKIQLFLKRLRKRMKE 103
            WEEVKK+REKI  RGLKKNPGCSWIEIKGKV IFV+G +  P A+KI+  LKRLR  MK 
Sbjct: 719  WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKR 778

Query: 102  EGHSPNLTYALINADDREKEISLCGHSEKLAMAF 1
            EG+ P   YALINAD+ EKE++LCGHSEKLAMAF
Sbjct: 779  EGYFPKTRYALINADEMEKEVALCGHSEKLAMAF 812



 Score =  210 bits (534), Expect = 2e-51
 Identities = 122/380 (32%), Positives = 200/380 (52%), Gaps = 2/380 (0%)
 Frame = -3

Query: 1536 TMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNM 1357
            T   VL   + +GN+    ++H + +K GF    T  NSL+  Y K   +  A  +F  +
Sbjct: 200  TFSCVLKCLAVVGNVKEGESVHGFMLKLGFGCNNTVLNSLITYYFKSRRVKDAHKLFDEL 259

Query: 1356 EERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGK 1177
             +R VVSW  MI+GY   G++++ +++F++M   G   D  T+ ++L  CA  G+L  G+
Sbjct: 260  SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR 319

Query: 1176 EVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNC 997
             VH +  +      +  +N L+DMY+KCG ++ A  VF +M  + + SW +MI GY++  
Sbjct: 320  AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 379

Query: 996  LPNEALDSFINM-QSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVAN 820
            + + A+  F  M +  I PD   +T IL        L+ G+++H YI  ++  S  +V+N
Sbjct: 380  VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 439

Query: 819  ALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIP 640
            ALMDMY KCG+M  A+ +F+++  KDIVSW  MI GY      +EA+  F  M Q    P
Sbjct: 440  ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGGYSKNSCPNEALDLFVAMLQ-NFEP 498

Query: 639  DEVSFTSILYACSHSGLLDEGWRFYN-IMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            D V+   IL AC+    L+ G   +  I+R+  +    + +   +VD+  + G L  A  
Sbjct: 499  DGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN--AIVDMYVKCGVLVLARS 556

Query: 462  FIKRMPVQPDATIWGALLCG 403
                +P + D   W  ++ G
Sbjct: 557  LFDMIPAK-DLISWTIMIAG 575



 Score =  187 bits (474), Expect = 1e-44
 Identities = 112/381 (29%), Positives = 199/381 (52%), Gaps = 3/381 (0%)
 Frame = -3

Query: 1536 TMVIVLAACSWIGNLMLIRNIHVYAIKAGF--DSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            T   +L  C+ + +L   + +H    ++G   D  +   + L+  +  CGD+     +F 
Sbjct: 98   TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFN 156

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
             ++   V  W  ++  Y++ G   E++ +F+ M+  GI AD++T + +L   A  G+++ 
Sbjct: 157  KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNVKE 216

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
            G+ VH ++ +   G +  V N+L+  Y K   ++DA  +F +++ +D+ SWN MI GY  
Sbjct: 217  GESVHGFMLKLGFGCNNTVLNSLITYYFKSRRVKDAHKLFDELSDRDVVSWNCMISGYIA 276

Query: 1002 NCLPNEALDSFINMQS-HIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFV 826
            N +  + L+ F  M +     D  T+  +L        L  GR +H + L++ FS +   
Sbjct: 277  NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 336

Query: 825  ANALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGI 646
             N L+DMY KCG +  A  +F+K+  + +VSWT MIAGY   G    AI  F+ M + GI
Sbjct: 337  NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 396

Query: 645  IPDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAY 466
             PD  + TSIL+AC+  GLL+ G   ++ ++ E ++   L     ++D+ A+ G + +A 
Sbjct: 397  EPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMADAE 455

Query: 465  KFIKRMPVQPDATIWGALLCG 403
                +MPV+ D   W  ++ G
Sbjct: 456  SVFNQMPVK-DIVSWNTMIGG 475



 Score =  128 bits (321), Expect = 8e-27
 Identities = 83/314 (26%), Positives = 153/314 (48%), Gaps = 2/314 (0%)
 Frame = -3

Query: 1338 SWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKEVHDYV 1159
            ++ + I  +   G  ++A+++     K  I  D  T  SIL  CA   SLE+GK+VH  +
Sbjct: 65   NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122

Query: 1158 KERNMG-SSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCLPNEA 982
             E  +      + + L+ M+  CG +++ + VF+++    +F WN ++  YSK     E+
Sbjct: 123  CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182

Query: 981  LDSFINMQS-HIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALMDM 805
            L  F  MQS  I  D  T +C+L        +  G  +HG++L+  F  +  V N+L+  
Sbjct: 183  LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNVKEGESVHGFMLKLGFGCNNTVLNSLITY 242

Query: 804  YVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPDEVSF 625
            Y K   +  A  +FD+++ +D+VSW  MI+GY   G   + +  FK+M   G   D  + 
Sbjct: 243  YFKSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 302

Query: 624  TSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYKFIKRMP 445
             ++L  C++ G L  G R  +    +     ++     ++D+ ++ G L  A +  ++M 
Sbjct: 303  VTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 361

Query: 444  VQPDATIWGALLCG 403
             +     W +++ G
Sbjct: 362  -ERSVVSWTSMIAG 374


>gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis]
          Length = 877

 Score =  739 bits (1908), Expect = 0.0
 Identities = 352/514 (68%), Positives = 425/514 (82%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            LAT+V  L AC+ IG  +L R +H YAIKA FD +I F N+LLD YSKCG++  AV +F+
Sbjct: 305  LATIVNALVACANIGTHLLGRAVHAYAIKACFDGEIMFRNTLLDMYSKCGELDAAVQVFE 364

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
               ERSVVSWTSMIAGYAR+G S+EAI++F +M + G+  D FT+TSILHACACSGSLE+
Sbjct: 365  KTGERSVVSWTSMIAGYAREGRSNEAIRLFYEMERNGVSPDIFTITSILHACACSGSLED 424

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
            GK+VH+Y++E  M S+LFV NALMDMY+KCGSM+DA  VFS+M AKDI SWNTMIGGYSK
Sbjct: 425  GKDVHNYIRESGMESNLFVCNALMDMYSKCGSMDDANLVFSRMPAKDIISWNTMIGGYSK 484

Query: 1002 NCLPNEALDSFINMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVA 823
            N LPNEAL  F  MQ   + D +T  CILP       L +GREIHG++LR+ +  DR VA
Sbjct: 485  NRLPNEALKLFAEMQGKSKADSITAACILPACASLAALAKGREIHGHVLRNGYFQDRHVA 544

Query: 822  NALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGII 643
            NAL+DMYVKCG + +AQ++FD I  KD++SWT+MIAGYGM+GFG EAIA F +M+ AGI 
Sbjct: 545  NALVDMYVKCGLLALAQVLFDMIPVKDLISWTVMIAGYGMHGFGREAIAAFDEMRHAGIE 604

Query: 642  PDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            PDEVSF SILYACSHSG LDEGW F+N+MRNEY+I P LEHYACMVDLL+R G L++AY+
Sbjct: 605  PDEVSFISILYACSHSG-LDEGWSFFNVMRNEYSIEPMLEHYACMVDLLSRTGNLSKAYR 663

Query: 462  FIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEAEK 283
            FI++MP++PDATIWGALLCGCR YH+VKLAE+VA+H+FELEP+NTGYY+LLANIYAEAEK
Sbjct: 664  FIRKMPIEPDATIWGALLCGCRTYHDVKLAERVAEHVFELEPDNTGYYVLLANIYAEAEK 723

Query: 282  WEEVKKMREKIGMRGLKKNPGCSWIEIKGKVYIFVSGDNGLPEARKIQLFLKRLRKRMKE 103
            WEEV+K+REKIG RGLKKNPGCSWIEIKGKV IFV+GD+  P A+KI+  LKRLR +MKE
Sbjct: 724  WEEVRKLREKIGRRGLKKNPGCSWIEIKGKVNIFVAGDDSQPLAKKIESLLKRLRAKMKE 783

Query: 102  EGHSPNLTYALINADDREKEISLCGHSEKLAMAF 1
            EG  PN+ YALINAD+ EKE++LCGHSEKLAMAF
Sbjct: 784  EGFYPNMKYALINADEMEKEVALCGHSEKLAMAF 817



 Score =  224 bits (570), Expect = 1e-55
 Identities = 143/447 (31%), Positives = 223/447 (49%), Gaps = 7/447 (1%)
 Frame = -3

Query: 1536 TMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNM 1357
            T+  VL     +GNL     IH Y  K GF    T  NSL+  Y K G +  A  +F  +
Sbjct: 206  TLSCVLKCFGALGNLKEGERIHAYLYKLGFGCYNTVLNSLVAFYFKSGRVESAQKVFDEL 265

Query: 1356 EERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGK 1177
             +R V+SW SMI+GY+  GL ++ + +F  M   G+  D  T+ + L ACA  G+   G+
Sbjct: 266  TDRDVISWNSMISGYSSNGLGEKGVGIFGKMLSLGVNVDLATIVNALVACANIGTHLLGR 325

Query: 1176 EVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNC 997
             VH Y  +      +   N L+DMY+KCG ++ A  VF +   + + SW +MI GY++  
Sbjct: 326  AVHAYAIKACFDGEIMFRNTLLDMYSKCGELDAAVQVFEKTGERSVVSWTSMIAGYAREG 385

Query: 996  LPNEALDSFINMQSH-IRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVAN 820
              NEA+  F  M+ + + PD  T+T IL        L+ G+++H YI  S   S+ FV N
Sbjct: 386  RSNEAIRLFYEMERNGVSPDIFTITSILHACACSGSLEDGKDVHNYIRESGMESNLFVCN 445

Query: 819  ALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIP 640
            ALMDMY KCG+M  A L+F ++ +KDI+SW  MI GY      +EA+  F +M Q     
Sbjct: 446  ALMDMYSKCGSMDDANLVFSRMPAKDIISWNTMIGGYSKNRLPNEALKLFAEM-QGKSKA 504

Query: 639  DEVSFTSILYACSHSGLLDEGWRFY-NIMRNEYNIVPKLEHYA-CMVDLLARAGKLTEAY 466
            D ++   IL AC+    L +G   + +++RN Y    +  H A  +VD+  + G L  A 
Sbjct: 505  DSITAACILPACASLAALAKGREIHGHVLRNGYF---QDRHVANALVDMYVKCGLLALAQ 561

Query: 465  KFIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFE--LEPENTGYYILL--ANIY 298
                 +PV+ D   W  ++ G  ++   + A    D +    +EP+   +  +L   +  
Sbjct: 562  VLFDMIPVK-DLISWTVMIAGYGMHGFGREAIAAFDEMRHAGIEPDEVSFISILYACSHS 620

Query: 297  AEAEKWEEVKKMREKIGMRGLKKNPGC 217
               E W     MR +  +  + ++  C
Sbjct: 621  GLDEGWSFFNVMRNEYSIEPMLEHYAC 647



 Score =  203 bits (517), Expect = 1e-49
 Identities = 129/428 (30%), Positives = 213/428 (49%), Gaps = 1/428 (0%)
 Frame = -3

Query: 1536 TMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNM 1357
            T   VL  C+   +L   + +H     +G +        L+  Y  CGD+  A  IF N+
Sbjct: 105  TYCSVLELCAQRKSLRDGKRVHSVIRDSGVEVDGYLGEKLVFMYVNCGDLREARRIFDNI 164

Query: 1356 EERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGK 1177
                V  W  +I  YA+     E++ +F+ M++ GI+A++ T++ +L      G+L+ G+
Sbjct: 165  YTDRVFVWNLVINEYAKIRNFRESVSLFKKMQELGIQANSHTLSCVLKCFGALGNLKEGE 224

Query: 1176 EVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNC 997
             +H Y+ +   G    V N+L+  Y K G +E A+ VF ++T +D+ SWN+MI GYS N 
Sbjct: 225  RIHAYLYKLGFGCYNTVLNSLVAFYFKSGRVESAQKVFDELTDRDVISWNSMISGYSSNG 284

Query: 996  LPNEALDSFINMQS-HIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVAN 820
            L  + +  F  M S  +  D  T+   L           GR +H Y +++ F  +    N
Sbjct: 285  LGEKGVGIFGKMLSLGVNVDLATIVNALVACANIGTHLLGRAVHAYAIKACFDGEIMFRN 344

Query: 819  ALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIP 640
             L+DMY KCG +  A  +F+K   + +VSWT MIAGY   G  +EAI  F +M++ G+ P
Sbjct: 345  TLLDMYSKCGELDAAVQVFEKTGERSVVSWTSMIAGYAREGRSNEAIRLFYEMERNGVSP 404

Query: 639  DEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYKF 460
            D  + TSIL+AC+ SG L++G   +N +R E  +   L     ++D+ ++ G + +A   
Sbjct: 405  DIFTITSILHACACSGSLEDGKDVHNYIR-ESGMESNLFVCNALMDMYSKCGSMDDANLV 463

Query: 459  IKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEAEKW 280
              RMP + D   W  ++ G   Y + +L  +      E++ ++    I  A I       
Sbjct: 464  FSRMPAK-DIISWNTMIGG---YSKNRLPNEALKLFAEMQGKSKADSITAACILPACASL 519

Query: 279  EEVKKMRE 256
              + K RE
Sbjct: 520  AALAKGRE 527



 Score =  126 bits (317), Expect = 2e-26
 Identities = 76/285 (26%), Positives = 137/285 (48%), Gaps = 3/285 (1%)
 Frame = -3

Query: 1248 EADAFTVTSILHACACSGSLENGKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKT 1069
            E ++ T  S+L  CA   SL +GK VH  +++  +    ++   L+ MY  CG + +A+ 
Sbjct: 100  ELESRTYCSVLELCAQRKSLRDGKRVHSVIRDSGVEVDGYLGEKLVFMYVNCGDLREARR 159

Query: 1068 VFSQMTAKDIFSWNTMIGGYSKNCLPNEALDSFINMQS-HIRPDDVTVTCILPXXXXXXX 892
            +F  +    +F WN +I  Y+K     E++  F  MQ   I+ +  T++C+L        
Sbjct: 160  IFDNIYTDRVFVWNLVINEYAKIRNFRESVSLFKKMQELGIQANSHTLSCVLKCFGALGN 219

Query: 891  LDRGREIHGYILRSEFSSDRFVANALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAG 712
            L  G  IH Y+ +  F     V N+L+  Y K G +  AQ +FD++  +D++SW  MI+G
Sbjct: 220  LKEGERIHAYLYKLGFGCYNTVLNSLVAFYFKSGRVESAQKVFDELTDRDVISWNSMISG 279

Query: 711  YGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILYACSHSG--LLDEGWRFYNIMRNEYNI 538
            Y   G G + +  F  M   G+  D  +  + L AC++ G  LL      Y I   +   
Sbjct: 280  YSSNGLGEKGVGIFGKMLSLGVNVDLATIVNALVACANIGTHLLGRAVHAYAI---KACF 336

Query: 537  VPKLEHYACMVDLLARAGKLTEAYKFIKRMPVQPDATIWGALLCG 403
              ++     ++D+ ++ G+L  A +  ++   +     W +++ G
Sbjct: 337  DGEIMFRNTLLDMYSKCGELDAAVQVFEKTG-ERSVVSWTSMIAG 380


>gb|EMJ15466.1| hypothetical protein PRUPE_ppa025121mg [Prunus persica]
          Length = 796

 Score =  736 bits (1899), Expect = 0.0
 Identities = 345/514 (67%), Positives = 425/514 (82%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            LAT++ VL ACS  GNL L R +H YAIK   D  I F N++LD YSKCGD+  A  +F 
Sbjct: 223  LATVINVLMACSDGGNLSLGRALHSYAIKTCLDMDIMFYNNVLDMYSKCGDLSSATQVFG 282

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
             M +RSVVSWTSMIAGY R+GLSDEAI++F +M +  +  D +T+TSILHACAC+GSL+ 
Sbjct: 283  KMGQRSVVSWTSMIAGYVREGLSDEAIELFSEMERNDVSPDVYTITSILHACACNGSLKK 342

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
            G+++H Y++E  M SSLFV N LMDMYAKCGSMEDA +VFS M  KDI SWNTMIGGYSK
Sbjct: 343  GRDIHKYIREHGMDSSLFVCNTLMDMYAKCGSMEDAHSVFSSMPVKDIVSWNTMIGGYSK 402

Query: 1002 NCLPNEALDSFINMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVA 823
            NCLPNEAL  F  MQ   +PD +T+  +LP       L+RG+EIHG+ILR+ + SDR+VA
Sbjct: 403  NCLPNEALKLFSEMQQKSKPDGMTIASVLPACASLAALNRGQEIHGHILRNGYFSDRYVA 462

Query: 822  NALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGII 643
            NAL+DMYVKCG +++A+L+FD I  KD++SWT+++AGYGM+GFGSEAI  F +M+++GI 
Sbjct: 463  NALVDMYVKCGVLVLARLLFDIIPIKDLISWTVIVAGYGMHGFGSEAITAFNEMRKSGIK 522

Query: 642  PDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            PD +SF SILYACSHSGLLDE WRF++ MRN+Y+IVPKLEHYACMVDLLAR G LT+AYK
Sbjct: 523  PDSISFISILYACSHSGLLDEAWRFFDSMRNDYSIVPKLEHYACMVDLLARTGNLTKAYK 582

Query: 462  FIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEAEK 283
            FI +MP++PDATIWG+LLCGCRI+H+VKLAEKVA+ +FELEPENTGYY+LLANIYAEAEK
Sbjct: 583  FINKMPIEPDATIWGSLLCGCRIHHDVKLAEKVAERVFELEPENTGYYVLLANIYAEAEK 642

Query: 282  WEEVKKMREKIGMRGLKKNPGCSWIEIKGKVYIFVSGDNGLPEARKIQLFLKRLRKRMKE 103
            WEEVKK+RE+IG +GLKKNPGCSWIEIKGKV IFV+G++  P+A KI+  LKRLR +MKE
Sbjct: 643  WEEVKKLRERIGRQGLKKNPGCSWIEIKGKVQIFVAGNSSHPQATKIESLLKRLRLKMKE 702

Query: 102  EGHSPNLTYALINADDREKEISLCGHSEKLAMAF 1
            EG+SP + YALINAD+ EKE++LCGHSEKLA+AF
Sbjct: 703  EGYSPKMQYALINADEMEKEVALCGHSEKLAIAF 736



 Score =  223 bits (567), Expect = 2e-55
 Identities = 129/380 (33%), Positives = 200/380 (52%), Gaps = 2/380 (0%)
 Frame = -3

Query: 1536 TMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNM 1357
            T   +L   S +G +     +H Y  K GF S  T  NSL+  Y K   +  A  +F  +
Sbjct: 124  TFSCILKCFSSLGYVREGEWVHGYLYKLGFGSDNTVGNSLMAFYFKNRIIESARKVFDEL 183

Query: 1356 EERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGK 1177
             +R V+SW SMI+ Y   GL+++ +++FR M   G++ D  TV ++L AC+  G+L  G+
Sbjct: 184  SDRDVISWNSMISAYVANGLAEKGVEIFRQMLSLGVDVDLATVINVLMACSDGGNLSLGR 243

Query: 1176 EVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNC 997
             +H Y  +  +   +   N ++DMY+KCG +  A  VF +M  + + SW +MI GY +  
Sbjct: 244  ALHSYAIKTCLDMDIMFYNNVLDMYSKCGDLSSATQVFGKMGQRSVVSWTSMIAGYVREG 303

Query: 996  LPNEALDSFINMQ-SHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVAN 820
            L +EA++ F  M+ + + PD  T+T IL        L +GR+IH YI      S  FV N
Sbjct: 304  LSDEAIELFSEMERNDVSPDVYTITSILHACACNGSLKKGRDIHKYIREHGMDSSLFVCN 363

Query: 819  ALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIP 640
             LMDMY KCG+M  A  +F  +  KDIVSW  MI GY      +EA+  F +M+Q    P
Sbjct: 364  TLMDMYAKCGSMEDAHSVFSSMPVKDIVSWNTMIGGYSKNCLPNEALKLFSEMQQKS-KP 422

Query: 639  DEVSFTSILYACSHSGLLDEGWRFY-NIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            D ++  S+L AC+    L+ G   + +I+RN Y     + +   +VD+  + G L  A  
Sbjct: 423  DGMTIASVLPACASLAALNRGQEIHGHILRNGYFSDRYVAN--ALVDMYVKCGVLVLARL 480

Query: 462  FIKRMPVQPDATIWGALLCG 403
                +P++ D   W  ++ G
Sbjct: 481  LFDIIPIK-DLISWTVIVAG 499



 Score =  197 bits (500), Expect = 1e-47
 Identities = 118/375 (31%), Positives = 191/375 (50%), Gaps = 1/375 (0%)
 Frame = -3

Query: 1524 VLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNMEERS 1345
            VL  C+ + +L   + +H      G +        L+  + KCGD+  A  +F  +    
Sbjct: 27   VLELCAGLKSLQDGKRVHSVICNNGAEVDGPLGAKLVFMFVKCGDLREARRVFDKLSNGK 86

Query: 1344 VVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKEVHD 1165
            V  W  MI  YA+     E I +FR M++ GI+A+++T + IL   +  G +  G+ VH 
Sbjct: 87   VFLWNLMINEYAKVRNFREGIHLFRKMQELGIQANSYTFSCILKCFSSLGYVREGEWVHG 146

Query: 1164 YVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCLPNE 985
            Y+ +   GS   V N+LM  Y K   +E A+ VF +++ +D+ SWN+MI  Y  N L  +
Sbjct: 147  YLYKLGFGSDNTVGNSLMAFYFKNRIIESARKVFDELSDRDVISWNSMISAYVANGLAEK 206

Query: 984  ALDSFINMQS-HIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALMD 808
             ++ F  M S  +  D  TV  +L        L  GR +H Y +++    D    N ++D
Sbjct: 207  GVEIFRQMLSLGVDVDLATVINVLMACSDGGNLSLGRALHSYAIKTCLDMDIMFYNNVLD 266

Query: 807  MYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPDEVS 628
            MY KCG +  A  +F K+  + +VSWT MIAGY   G   EAI  F +M++  + PD  +
Sbjct: 267  MYSKCGDLSSATQVFGKMGQRSVVSWTSMIAGYVREGLSDEAIELFSEMERNDVSPDVYT 326

Query: 627  FTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYKFIKRM 448
             TSIL+AC+ +G L +G   +  +R E+ +   L     ++D+ A+ G + +A+     M
Sbjct: 327  ITSILHACACNGSLKKGRDIHKYIR-EHGMDSSLFVCNTLMDMYAKCGSMEDAHSVFSSM 385

Query: 447  PVQPDATIWGALLCG 403
            PV+ D   W  ++ G
Sbjct: 386  PVK-DIVSWNTMIGG 399



 Score =  129 bits (325), Expect = 3e-27
 Identities = 86/308 (27%), Positives = 146/308 (47%), Gaps = 5/308 (1%)
 Frame = -3

Query: 1248 EADAFTVTSILHACACSGSLENGKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKT 1069
            E D     S+L  CA   SL++GK VH  +          +   L+ M+ KCG + +A+ 
Sbjct: 18   ELDLEGYCSVLELCAGLKSLQDGKRVHSVICNNGAEVDGPLGAKLVFMFVKCGDLREARR 77

Query: 1068 VFSQMTAKDIFSWNTMIGGYSKNCLPNEALDSFINMQS-HIRPDDVTVTCILPXXXXXXX 892
            VF +++   +F WN MI  Y+K     E +  F  MQ   I+ +  T +CIL        
Sbjct: 78   VFDKLSNGKVFLWNLMINEYAKVRNFREGIHLFRKMQELGIQANSYTFSCILKCFSSLGY 137

Query: 891  LDRGREIHGYILRSEFSSDRFVANALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAG 712
            +  G  +HGY+ +  F SD  V N+LM  Y K   +  A+ +FD+++ +D++SW  MI+ 
Sbjct: 138  VREGEWVHGYLYKLGFGSDNTVGNSLMAFYFKNRIIESARKVFDELSDRDVISWNSMISA 197

Query: 711  YGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVP 532
            Y   G   + +  F+ M   G+  D  +  ++L ACS  G L  G   ++     Y I  
Sbjct: 198  YVANGLAEKGVEIFRQMLSLGVDVDLATVINVLMACSDGGNLSLGRALHS-----YAIKT 252

Query: 531  KLE----HYACMVDLLARAGKLTEAYKFIKRMPVQPDATIWGALLCGCRIYHEVKLAEKV 364
             L+     Y  ++D+ ++ G L+ A +   +M  Q     W +++ G   Y    L+++ 
Sbjct: 253  CLDMDIMFYNNVLDMYSKCGDLSSATQVFGKMG-QRSVVSWTSMIAG---YVREGLSDEA 308

Query: 363  ADHIFELE 340
             +   E+E
Sbjct: 309  IELFSEME 316


>gb|EOY27956.1| Pentatricopeptide, putative [Theobroma cacao]
          Length = 874

 Score =  733 bits (1891), Expect = 0.0
 Identities = 343/514 (66%), Positives = 425/514 (82%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            LAT+V VL  C+  G L L + +H  AIKA F+ K+ FNN+LLD YSKCGD+ GA+ +F+
Sbjct: 301  LATIVTVLVGCANSGTLSLGKAVHALAIKACFERKLNFNNTLLDMYSKCGDLDGALRVFE 360

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
             M ER+VVSWTSMIAGY R G SD AI++ + M + G++ D   +TS+LHACA SGSLEN
Sbjct: 361  KMGERNVVSWTSMIAGYTRDGQSDGAIRLLQQMEREGVKLDVVAITSVLHACARSGSLEN 420

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
            GK+VHDY+K  N+ S+LFV NALMDMYAKCGSMEDA ++FS+M  KDI SWNTMIGGYSK
Sbjct: 421  GKDVHDYIKANNVESNLFVCNALMDMYAKCGSMEDANSIFSRMAVKDIISWNTMIGGYSK 480

Query: 1002 NCLPNEALDSFINMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVA 823
            NCLPNEAL     M   ++PD  T+ CILP       L+RG+EIHG+ILR+ + SDR VA
Sbjct: 481  NCLPNEALKMLAAMLKELKPDSRTLACILPACASLAALERGKEIHGHILRNGYFSDRHVA 540

Query: 822  NALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGII 643
            NAL+D+YVKCG + +A+L+FD I+SKD+VSWT+MIAGYGM+GF +EAI TF +M+ AGI 
Sbjct: 541  NALVDLYVKCGVLALARLLFDMISSKDLVSWTVMIAGYGMHGFANEAITTFNEMRDAGIE 600

Query: 642  PDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            PDEVSF SILYACSHSGLL+EGWRF+ IMRN+YNI PKLEHYACMVDLL+R G L++A+ 
Sbjct: 601  PDEVSFISILYACSHSGLLEEGWRFFYIMRNDYNIEPKLEHYACMVDLLSRTGNLSKAFH 660

Query: 462  FIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEAEK 283
            FI+RMP+ PDATIWGA+LCGCRIYH+VKLAE+VA+ +FELEPENTGYY+LLANIYAEAEK
Sbjct: 661  FIERMPIAPDATIWGAVLCGCRIYHDVKLAERVAERVFELEPENTGYYVLLANIYAEAEK 720

Query: 282  WEEVKKMREKIGMRGLKKNPGCSWIEIKGKVYIFVSGDNGLPEARKIQLFLKRLRKRMKE 103
            WEEVK++RE+IG +GL+KNPGCSWIEIKGKV +FV+GD+  P+++KI+  LK+LR++MK 
Sbjct: 721  WEEVKRVRERIGRKGLRKNPGCSWIEIKGKVNLFVAGDSSHPQSKKIESLLKKLRRKMKG 780

Query: 102  EGHSPNLTYALINADDREKEISLCGHSEKLAMAF 1
            EG+ P   YALINADD +KE++LCGHSEKLAMAF
Sbjct: 781  EGYFPKTKYALINADDMQKEMALCGHSEKLAMAF 814



 Score =  209 bits (531), Expect = 3e-51
 Identities = 130/385 (33%), Positives = 202/385 (52%), Gaps = 7/385 (1%)
 Frame = -3

Query: 1536 TMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNM 1357
            T   +L   +  G L     +H Y +K GF S  +  NSL+  Y K   +  A  +F  +
Sbjct: 202  TFSCILKCLAASGGLKEGERVHGYLLKLGFGSYNSVVNSLITFYFKGKRVESASELFDEL 261

Query: 1356 EERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGK 1177
             +R V+SW SMI+GY   GL+++ +++F++M   GI+ D  T+ ++L  CA SG+L  GK
Sbjct: 262  IDRDVISWNSMISGYVSNGLAEKGLEVFKEMLYLGIDVDLATIVTVLVGCANSGTLSLGK 321

Query: 1176 EVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNC 997
             VH    +      L  +N L+DMY+KCG ++ A  VF +M  +++ SW +MI GY+++ 
Sbjct: 322  AVHALAIKACFERKLNFNNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDG 381

Query: 996  LPNEALDSFINMQSH-IRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVAN 820
              + A+     M+   ++ D V +T +L        L+ G+++H YI  +   S+ FV N
Sbjct: 382  QSDGAIRLLQQMEREGVKLDVVAITSVLHACARSGSLENGKDVHDYIKANNVESNLFVCN 441

Query: 819  ALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAI----ATFKDMKQA 652
            ALMDMY KCG+M  A  IF ++A KDI+SW  MI GY      +EA+    A  K++K  
Sbjct: 442  ALMDMYAKCGSMEDANSIFSRMAVKDIISWNTMIGGYSKNCLPNEALKMLAAMLKELK-- 499

Query: 651  GIIPDEVSFTSILYACSHSGLLDEGWRFY-NIMRNEYNIVPKLEHYA-CMVDLLARAGKL 478
               PD  +   IL AC+    L+ G   + +I+RN Y       H A  +VDL  + G L
Sbjct: 500  ---PDSRTLACILPACASLAALERGKEIHGHILRNGYF---SDRHVANALVDLYVKCGVL 553

Query: 477  TEAYKFIKRMPVQPDATIWGALLCG 403
              A + +  M    D   W  ++ G
Sbjct: 554  ALA-RLLFDMISSKDLVSWTVMIAG 577



 Score =  199 bits (506), Expect = 3e-48
 Identities = 120/379 (31%), Positives = 193/379 (50%), Gaps = 1/379 (0%)
 Frame = -3

Query: 1536 TMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNM 1357
            T   +L  C+ + +L   + +H      G        + L+  Y  CGD+     IF  M
Sbjct: 101  TYCSILQLCADLKSLKDGKKVHSIINSNGVAVDEVLGSKLVSFYVTCGDLKEGRGIFDEM 160

Query: 1356 EERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGK 1177
            E++ V  W  M+  YA+ G   E+I +F+ M K+GIE D++T + IL   A SG L+ G+
Sbjct: 161  EKKKVFLWNYMLNEYAKFGDFKESIYLFKMMMKKGIEVDSYTFSCILKCLAASGGLKEGE 220

Query: 1176 EVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNC 997
             VH Y+ +   GS   V N+L+  Y K   +E A  +F ++  +D+ SWN+MI GY  N 
Sbjct: 221  RVHGYLLKLGFGSYNSVVNSLITFYFKGKRVESASELFDELIDRDVISWNSMISGYVSNG 280

Query: 996  LPNEALDSFINM-QSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVAN 820
            L  + L+ F  M    I  D  T+  +L        L  G+ +H   +++ F       N
Sbjct: 281  LAEKGLEVFKEMLYLGIDVDLATIVTVLVGCANSGTLSLGKAVHALAIKACFERKLNFNN 340

Query: 819  ALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIP 640
             L+DMY KCG +  A  +F+K+  +++VSWT MIAGY   G    AI   + M++ G+  
Sbjct: 341  TLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGQSDGAIRLLQQMEREGVKL 400

Query: 639  DEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYKF 460
            D V+ TS+L+AC+ SG L+ G   ++ ++   N+   L     ++D+ A+ G + +A   
Sbjct: 401  DVVAITSVLHACARSGSLENGKDVHDYIKAN-NVESNLFVCNALMDMYAKCGSMEDANSI 459

Query: 459  IKRMPVQPDATIWGALLCG 403
              RM V+ D   W  ++ G
Sbjct: 460  FSRMAVK-DIISWNTMIGG 477



 Score =  138 bits (348), Expect = 6e-30
 Identities = 80/283 (28%), Positives = 142/283 (50%), Gaps = 1/283 (0%)
 Frame = -3

Query: 1248 EADAFTVTSILHACACSGSLENGKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKT 1069
            E ++ T  SIL  CA   SL++GK+VH  +    +     + + L+  Y  CG +++ + 
Sbjct: 96   ELESKTYCSILQLCADLKSLKDGKKVHSIINSNGVAVDEVLGSKLVSFYVTCGDLKEGRG 155

Query: 1068 VFSQMTAKDIFSWNTMIGGYSKNCLPNEALDSF-INMQSHIRPDDVTVTCILPXXXXXXX 892
            +F +M  K +F WN M+  Y+K     E++  F + M+  I  D  T +CIL        
Sbjct: 156  IFDEMEKKKVFLWNYMLNEYAKFGDFKESIYLFKMMMKKGIEVDSYTFSCILKCLAASGG 215

Query: 891  LDRGREIHGYILRSEFSSDRFVANALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAG 712
            L  G  +HGY+L+  F S   V N+L+  Y K   +  A  +FD++  +D++SW  MI+G
Sbjct: 216  LKEGERVHGYLLKLGFGSYNSVVNSLITFYFKGKRVESASELFDELIDRDVISWNSMISG 275

Query: 711  YGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVP 532
            Y   G   + +  FK+M   GI  D  +  ++L  C++SG L  G +  + +  +     
Sbjct: 276  YVSNGLAEKGLEVFKEMLYLGIDVDLATIVTVLVGCANSGTLSLG-KAVHALAIKACFER 334

Query: 531  KLEHYACMVDLLARAGKLTEAYKFIKRMPVQPDATIWGALLCG 403
            KL     ++D+ ++ G L  A +  ++M  + +   W +++ G
Sbjct: 335  KLNFNNTLLDMYSKCGDLDGALRVFEKMG-ERNVVSWTSMIAG 376



 Score = 65.5 bits (158), Expect = 6e-08
 Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 3/244 (1%)
 Frame = -3

Query: 1089 SMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCLPNEALDSFINMQSHIRPDDVTVTCILPX 910
            S    KT+ +Q+T      +N  I  + +    + A++  ++M  +   +  T   IL  
Sbjct: 55   SATPGKTIDNQVT-----DYNARIFQFCQLGNLHNAME-LLSMSPNSELESKTYCSILQL 108

Query: 909  XXXXXXLDRGREIHGYILRSEFSSDRFVANALMDMYVKCGAMLMAQLIFDKIASKDIVSW 730
                  L  G+++H  I  +  + D  + + L+  YV CG +   + IFD++  K +  W
Sbjct: 109  CADLKSLKDGKKVHSIINSNGVAVDEVLGSKLVSFYVTCGDLKEGRGIFDEMEKKKVFLW 168

Query: 729  TIMIAGYGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILYACSHSGLLDEGWRFYNIMRN 550
              M+  Y  +G   E+I  FK M + GI  D  +F+ IL   + SG L EG R +     
Sbjct: 169  NYMLNEYAKFGDFKESIYLFKMMMKKGIEVDSYTFSCILKCLAASGGLKEGERVHG---- 224

Query: 549  EYNIVPKLEHYACMVDLLAR---AGKLTEAYKFIKRMPVQPDATIWGALLCGCRIYHEVK 379
             Y +      Y  +V+ L      GK  E+   +    +  D   W +++ G   Y    
Sbjct: 225  -YLLKLGFGSYNSVVNSLITFYFKGKRVESASELFDELIDRDVISWNSMISG---YVSNG 280

Query: 378  LAEK 367
            LAEK
Sbjct: 281  LAEK 284


>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
            gi|449500809|ref|XP_004161200.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  726 bits (1874), Expect = 0.0
 Identities = 343/515 (66%), Positives = 423/515 (82%), Gaps = 1/515 (0%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAG-FDSKITFNNSLLDAYSKCGDMHGAVCIF 1366
            LATMV V  AC+ IG L+L + +H Y+IKA   D ++ FNN+LLD YSKCGD++ A+ +F
Sbjct: 352  LATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVF 411

Query: 1365 KNMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLE 1186
            + M+E++VVSWTSMI GY R+GLSD AI++F +M+ RG+  D + VTSIL+ACA +G+L+
Sbjct: 412  ERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLK 471

Query: 1185 NGKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYS 1006
            +GK VHDY++E N+ ++ FVSNAL DMYAKCGSM+DA  VFS M  KD+ SWNTMIGGY+
Sbjct: 472  SGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYT 531

Query: 1005 KNCLPNEALDSFINMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFV 826
            KN LPNEAL  F  MQ   +PD  TV CILP       LD+GREIHGY LR+ +S D++V
Sbjct: 532  KNSLPNEALTLFAEMQRESKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYV 591

Query: 825  ANALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGI 646
             NA++DMYVKCG +++A+ +FD I +KD+VSWT+MIAGYGM+G+GSEAI TF  M+  GI
Sbjct: 592  TNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGI 651

Query: 645  IPDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAY 466
             PDEVSF SILYACSHSGLLDEGW+ +NIM+ E  I P LEHYACMVDLLAR G L +A+
Sbjct: 652  EPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAH 711

Query: 465  KFIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEAE 286
            KFIK MP++PDATIWGALLCGCRI+H+VKLAEKVA+ IFELEPENTGYY+LLANIYAEAE
Sbjct: 712  KFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAE 771

Query: 285  KWEEVKKMREKIGMRGLKKNPGCSWIEIKGKVYIFVSGDNGLPEARKIQLFLKRLRKRMK 106
            KWEEV+K+R+KIG RGLKKNPGCSWIEIKGK+ IFV+GD   P+A+KI+L LKRLR +MK
Sbjct: 772  KWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMK 831

Query: 105  EEGHSPNLTYALINADDREKEISLCGHSEKLAMAF 1
            EEG+SP   YAL+NAD+REKE++LCGHSEKLAMAF
Sbjct: 832  EEGYSPKTAYALLNADEREKEVALCGHSEKLAMAF 866



 Score =  203 bits (517), Expect = 1e-49
 Identities = 123/363 (33%), Positives = 187/363 (51%), Gaps = 3/363 (0%)
 Frame = -3

Query: 1482 RNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNMEERSVVSWTSMIAGYARQ 1303
            R +H    K GF+S  T  NSL+  Y     +  A  +F  + +R V+SW SMI+GY + 
Sbjct: 271  RQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKN 330

Query: 1302 GLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKEVHDY-VKERNMGSSLFV 1126
            GL D  I++F  M   G++ D  T+ ++  ACA  G+L  GK +H Y +K   +   +  
Sbjct: 331  GLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRF 390

Query: 1125 SNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCLPNEALDSFINMQSH-I 949
            +N L+DMY+KCG +  A  VF +M  K + SW +MI GY +  L + A+  F  M+S  +
Sbjct: 391  NNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGV 450

Query: 948  RPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALMDMYVKCGAMLMAQL 769
             PD   VT IL        L  G+ +H YI  +   ++ FV+NAL DMY KCG+M  A  
Sbjct: 451  VPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHD 510

Query: 768  IFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILYACSHSGL 589
            +F  +  KD++SW  MI GY      +EA+  F +M++    PD  +   IL AC+    
Sbjct: 511  VFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAA 569

Query: 588  LDEGWRFYN-IMRNEYNIVPKLEHYACMVDLLARAGKLTEAYKFIKRMPVQPDATIWGAL 412
            LD+G   +   +RN Y+    + +   +VD+  + G L  A      +P   D   W  +
Sbjct: 570  LDKGREIHGYALRNGYSEDKYVTN--AVVDMYVKCGLLVLARSLFDMIP-NKDLVSWTVM 626

Query: 411  LCG 403
            + G
Sbjct: 627  IAG 629



 Score =  175 bits (444), Expect = 4e-41
 Identities = 107/342 (31%), Positives = 176/342 (51%), Gaps = 3/342 (0%)
 Frame = -3

Query: 1419 LLDAYSKCGDMHGAVCIFKNMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEAD 1240
            L+  Y KCGD+     +F  + E  +  W  MI+ Y+  G   E+I +F+ M + GI+ +
Sbjct: 191  LVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPN 250

Query: 1239 AFTVTSILHACACSGSLENGKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFS 1060
            ++T +SIL   A    +E G++VH  + +    S   V N+L+  Y     +  A+ +F 
Sbjct: 251  SYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFD 310

Query: 1059 QMTAKDIFSWNTMIGGYSKNCLPNEALDSFINMQSH-IRPDDVTVTCILPXXXXXXXLDR 883
            ++T +D+ SWN+MI GY KN L +  ++ FI M    +  D  T+  +         L  
Sbjct: 311  ELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLL 370

Query: 882  GREIHGYILRSEFSSDRFVA--NALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGY 709
            G+ +H Y +++  + DR V   N L+DMY KCG +  A  +F+++  K +VSWT MI GY
Sbjct: 371  GKVLHSYSIKAA-TLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGY 429

Query: 708  GMYGFGSEAIATFKDMKQAGIIPDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPK 529
               G    AI  F +MK  G++PD  + TSIL AC+ +G L  G   ++ +R E N+   
Sbjct: 430  VREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIR-ENNLETN 488

Query: 528  LEHYACMVDLLARAGKLTEAYKFIKRMPVQPDATIWGALLCG 403
                  + D+ A+ G + +A+     M  + D   W  ++ G
Sbjct: 489  SFVSNALTDMYAKCGSMKDAHDVFSHMK-KKDVISWNTMIGG 529



 Score =  123 bits (308), Expect = 2e-25
 Identities = 73/275 (26%), Positives = 134/275 (48%), Gaps = 1/275 (0%)
 Frame = -3

Query: 1224 SILHACACSGSLENGKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAK 1045
            SIL  CA   S+ +G+ V   ++   +     +   L+ MY KCG +++ + VF +++  
Sbjct: 155  SILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSES 214

Query: 1044 DIFSWNTMIGGYSKNCLPNEALDSFINM-QSHIRPDDVTVTCILPXXXXXXXLDRGREIH 868
             IF WN MI  YS +    E+++ F  M +  I+P+  T + IL        ++ GR++H
Sbjct: 215  KIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVH 274

Query: 867  GYILRSEFSSDRFVANALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGS 688
            G I +  F+S   V N+L+  Y     +  AQ +FD++  +D++SW  MI+GY   G   
Sbjct: 275  GLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDD 334

Query: 687  EAIATFKDMKQAGIIPDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACM 508
              I  F  M   G+  D  +  ++  AC++ G L  G   ++       +  ++     +
Sbjct: 335  RGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTL 394

Query: 507  VDLLARAGKLTEAYKFIKRMPVQPDATIWGALLCG 403
            +D+ ++ G L  A +  +RM  +     W +++ G
Sbjct: 395  LDMYSKCGDLNSAIRVFERMD-EKTVVSWTSMITG 428


>ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, partial [Populus trichocarpa]
            gi|550340410|gb|EEE86244.2| hypothetical protein
            POPTR_0004s05810g, partial [Populus trichocarpa]
          Length = 778

 Score =  724 bits (1870), Expect = 0.0
 Identities = 340/514 (66%), Positives = 426/514 (82%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            LATMV +L AC+  G++ L R +H   +KA    K TF N+LLD Y+KCG + GA+ +F 
Sbjct: 205  LATMVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFD 264

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
             M  R+VV+WTS+IA YAR+GLSDEAI++F +M + G+  D FT+T++LHACAC+GSLEN
Sbjct: 265  LMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLEN 324

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
            GK+VH+Y++E +M S++FV NALMDMYAKCGSMEDA +VF +M  KDI SWNTMIGGYSK
Sbjct: 325  GKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSK 384

Query: 1002 NCLPNEALDSFINMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVA 823
            N LPNEAL  F +M   ++PD  T+ CILP       LDRG+E+HG+ILR+ F SD+ VA
Sbjct: 385  NSLPNEALSLFGDMVLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVA 444

Query: 822  NALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGII 643
            NAL+DMYVKCG  ++A+L+FD I +KD+++WT+MIAGYGM+GFG+ AI TF +M+QAGI 
Sbjct: 445  NALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIE 504

Query: 642  PDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            PDEVSF SILYACSHSGLLDEGWRF+N+M++E N+ PKLEHYAC+VDLLAR+GKL  AYK
Sbjct: 505  PDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYK 564

Query: 462  FIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEAEK 283
            FIK MP++PDATIWGALL GCRI+H+VKLAEKVA+H+FELEPENTGYY+LLAN YAEAEK
Sbjct: 565  FIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEK 624

Query: 282  WEEVKKMREKIGMRGLKKNPGCSWIEIKGKVYIFVSGDNGLPEARKIQLFLKRLRKRMKE 103
            WEEVKK+R+KIG RGLKKNPGCSWIE+K KV+IF++G++  P+A+KI++ LKRLR +MKE
Sbjct: 625  WEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKE 684

Query: 102  EGHSPNLTYALINADDREKEISLCGHSEKLAMAF 1
            EG+ P   YALINAD  +KE +LCGHSEKLAMAF
Sbjct: 685  EGYFPKTRYALINADSLQKETALCGHSEKLAMAF 718



 Score =  203 bits (516), Expect = 2e-49
 Identities = 122/380 (32%), Positives = 199/380 (52%), Gaps = 2/380 (0%)
 Frame = -3

Query: 1536 TMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNM 1357
            T+  VL   + +G++   + +H + +K G  S     NSL+  Y K   +  A  +F  +
Sbjct: 106  TVSCVLKCFAALGSVKEGKWVHGFLLKLGLGSYNAVVNSLIAFYLKIRRVDVARKLFDEL 165

Query: 1356 EERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGK 1177
              R V+SW SMI+GY   G S++ +++F+ M   G++ D  T+ SIL ACA  G +  G+
Sbjct: 166  SNRDVISWNSMISGYVANGFSEKGVELFKKMLYLGVDMDLATMVSILQACANCGDVSLGR 225

Query: 1176 EVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNC 997
             VH    +  +       N L+DMYAKCG ++ A  VF  M+ + + +W ++I  Y++  
Sbjct: 226  AVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREG 285

Query: 996  LPNEALDSFINM-QSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVAN 820
            L +EA+  F  M +  + PD  T+T +L        L+ G+++H YI  ++  S+ FV N
Sbjct: 286  LSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCN 345

Query: 819  ALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIP 640
            ALMDMY KCG+M  A  +F ++  KDI+SW  MI GY      +EA++ F DM    + P
Sbjct: 346  ALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDM-VLEMKP 404

Query: 639  DEVSFTSILYACSHSGLLDEGWRFY-NIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            D  +   IL AC+    LD G   + +I+RN +    ++ +   +VD+  + G    A  
Sbjct: 405  DGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVAN--ALVDMYVKCGVPVLARL 462

Query: 462  FIKRMPVQPDATIWGALLCG 403
                +P + D   W  ++ G
Sbjct: 463  LFDMIPTK-DLITWTVMIAG 481



 Score =  193 bits (490), Expect = 2e-46
 Identities = 112/390 (28%), Positives = 197/390 (50%), Gaps = 5/390 (1%)
 Frame = -3

Query: 1482 RNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNMEERSVVSWTSMIAGYARQ 1303
            + +H +   +G        + L+  Y  CGD+     IF  +    V  W  M+ GY + 
Sbjct: 23   KKVHSFICSSGISIDSVLGSKLVFMYVTCGDLREGRLIFDKIRNEKVFLWNLMMNGYTKI 82

Query: 1302 GLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKEVHDYVKERNMGSSLFVS 1123
            G   E++ +FR M   G+E ++ TV+ +L   A  GS++ GK VH ++ +  +GS   V 
Sbjct: 83   GDFKESVSLFRQMLDLGVEVNSHTVSCVLKCFAALGSVKEGKWVHGFLLKLGLGSYNAVV 142

Query: 1122 NALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCLPNEALDSFINM-QSHIR 946
            N+L+  Y K   ++ A+ +F +++ +D+ SWN+MI GY  N    + ++ F  M    + 
Sbjct: 143  NSLIAFYLKIRRVDVARKLFDELSNRDVISWNSMISGYVANGFSEKGVELFKKMLYLGVD 202

Query: 945  PDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALMDMYVKCGAMLMAQLI 766
             D  T+  IL        +  GR +HG  +++         N L+DMY KCG +  A L+
Sbjct: 203  MDLATMVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILV 262

Query: 765  FDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILYACSHSGLL 586
            FD ++ + +V+WT +IA Y   G   EAI  F +M + G+ PD  + T++L+AC+ +G L
Sbjct: 263  FDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSL 322

Query: 585  DEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYKFIKRMPVQPDATIWGALLC 406
            + G   +N +R E ++   +     ++D+ A+ G + +A      MPV+ D   W  ++ 
Sbjct: 323  ENGKDVHNYIR-ENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMIG 380

Query: 405  GCRIYHEVKLAEKV----ADHIFELEPENT 328
            G   Y +  L  +      D + E++P+ T
Sbjct: 381  G---YSKNSLPNEALSLFGDMVLEMKPDGT 407



 Score =  126 bits (317), Expect = 2e-26
 Identities = 86/314 (27%), Positives = 153/314 (48%), Gaps = 17/314 (5%)
 Frame = -3

Query: 1233 TVTSILHACACSGSLENGKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQM 1054
            T  SIL   A   SL++GK+VH ++    +     + + L+ MY  CG + + + +F ++
Sbjct: 5    TCCSILQLSAELKSLQDGKKVHSFICSSGISIDSVLGSKLVFMYVTCGDLREGRLIFDKI 64

Query: 1053 TAKDIFSWNTMIGGYSK-------NCLPNEALDSFINMQSHIRPDDVTVTCILPXXXXXX 895
              + +F WN M+ GY+K         L  + LD  + + SH      TV+C+L       
Sbjct: 65   RNEKVFLWNLMMNGYTKIGDFKESVSLFRQMLDLGVEVNSH------TVSCVLKCFAALG 118

Query: 894  XLDRGREIHGYILRSEFSSDRFVANALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIA 715
             +  G+ +HG++L+    S   V N+L+  Y+K   + +A+ +FD+++++D++SW  MI+
Sbjct: 119  SVKEGKWVHGFLLKLGLGSYNAVVNSLIAFYLKIRRVDVARKLFDELSNRDVISWNSMIS 178

Query: 714  GYGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIV 535
            GY   GF  + +  FK M   G+  D  +  SIL AC++ G +  G R  +    +  + 
Sbjct: 179  GYVANGFSEKGVELFKKMLYLGVDMDLATMVSILQACANCGDVSLG-RAVHGSGVKACVH 237

Query: 534  PKLEHYACMVDLLARAGKLTEAYKFIKRMPVQPDATIWGALLC----------GCRIYHE 385
             K      ++D+ A+ G L  A      M V+   T W +L+             R++HE
Sbjct: 238  WKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRTVVT-WTSLIAAYAREGLSDEAIRLFHE 296

Query: 384  VKLAEKVADHIFEL 343
            +   E V+  IF +
Sbjct: 297  MD-REGVSPDIFTI 309


>gb|AHB18405.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 875

 Score =  724 bits (1869), Expect = 0.0
 Identities = 342/515 (66%), Positives = 425/515 (82%), Gaps = 1/515 (0%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            LAT++ VL  C+  G L L + +H  AIK+ F+ +I F+N+LLD YSKCGD+ GA+ +F+
Sbjct: 301  LATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFE 360

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
             M ER+VVSWTSMIAGY R G SD AI + + M K G++ D   +TSILHACA SGSL+N
Sbjct: 361  KMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDN 420

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
            GK+VHDY+K  NM S+LFV NALMDMYAKCGSME A +VFS M  KDI SWNTM+GGYSK
Sbjct: 421  GKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGGYSK 480

Query: 1002 NCLPNEALDSFINMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVA 823
            NCLPNEAL +F  M   ++PD  T+ CILP       L+RG+EIHGYILR+ +SSDR VA
Sbjct: 481  NCLPNEALKTFAAMLKELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVA 540

Query: 822  NALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGII 643
            NAL+D+YVKCG + +A+L+FD I SKD+VSWT+MIAGYGM+G+G+EAIATF +M+ AGI 
Sbjct: 541  NALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE 600

Query: 642  PDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            PDEVSF SILYACSHSGLL++GWRF+ IM+N++NI PKLEHYACMVDLL+R G L++AYK
Sbjct: 601  PDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYK 660

Query: 462  FIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEAEK 283
            FI+ +P+ PDATIWGALLCGCRIYH+++LAEKVA+ +FELEPENTGYY+LLANIYAEAEK
Sbjct: 661  FIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEK 720

Query: 282  WEEVKKMREKIGMRGLKKNPGCSWIEIKGKVYIFVSGDNGL-PEARKIQLFLKRLRKRMK 106
             EEVK+MREKIG +GL+KNPGCSWIEIKG+V +FVSG+N   P ++KI+  LK++R++MK
Sbjct: 721  REEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMK 780

Query: 105  EEGHSPNLTYALINADDREKEISLCGHSEKLAMAF 1
            EEG+ P   YALINAD+ +KE++LCGHSEKLAMAF
Sbjct: 781  EEGYFPKTKYALINADEMQKEMALCGHSEKLAMAF 815



 Score =  212 bits (539), Expect = 4e-52
 Identities = 130/381 (34%), Positives = 199/381 (52%), Gaps = 3/381 (0%)
 Frame = -3

Query: 1536 TMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNM 1357
            T   VL   + +G+L     +H Y +K GF S  +  NSL+  Y K      A  +F  +
Sbjct: 202  TFSCVLKCFAALGSLKEGECVHGYLLKLGFGSCNSVVNSLIAFYFKGKRPESASELFDKL 261

Query: 1356 EERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGK 1177
             +R V+SW SMI+GY   GL++  + +++ M   GI+ D  T+ S+L  CA SG+L  GK
Sbjct: 262  CDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGK 321

Query: 1176 EVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNC 997
             VH    + +    +  SN L+DMY+KCG ++ A  VF +M  +++ SW +MI GY+++ 
Sbjct: 322  AVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDG 381

Query: 996  LPNEALDSFINMQSH-IRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVAN 820
              + A+     M+   ++ D V +T IL        LD G+++H YI  +  +S+ FV N
Sbjct: 382  WSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCN 441

Query: 819  ALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIP 640
            ALMDMY KCG+M  A  +F  +  KDI+SW  M+ GY      +EA+ TF  M +  + P
Sbjct: 442  ALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGGYSKNCLPNEALKTFAAMLKE-LKP 500

Query: 639  DEVSFTSILYACSHSGLLDEGWRFYN-IMRNEYNIVPKLEHYA-CMVDLLARAGKLTEAY 466
            D  +   IL AC+    L+ G   +  I+RN Y+      H A  +VDL  + G L  A 
Sbjct: 501  DSRTMACILPACASLSALERGKEIHGYILRNGYS---SDRHVANALVDLYVKCGVLGLAR 557

Query: 465  KFIKRMPVQPDATIWGALLCG 403
                 +P   D   W  ++ G
Sbjct: 558  LLFDMIP-SKDLVSWTVMIAG 577



 Score =  189 bits (481), Expect = 2e-45
 Identities = 118/377 (31%), Positives = 195/377 (51%), Gaps = 3/377 (0%)
 Frame = -3

Query: 1524 VLAACSWIGNLMLIRNIH--VYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNMEE 1351
            VL  C+ + +L   + +H  + +   G D  +     L+  Y+ CGD+     +F  ME+
Sbjct: 105  VLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLK--LVSFYATCGDLKEGRRVFDTMEK 162

Query: 1350 RSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKEV 1171
            ++V  W  M++ YA+ G   E+I +F+ M ++GIE +++T + +L   A  GSL+ G+ V
Sbjct: 163  KNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEVNSYTFSCVLKCFAALGSLKEGECV 222

Query: 1170 HDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCLP 991
            H Y+ +   GS   V N+L+  Y K    E A  +F ++  +D+ SWN+MI GY  N L 
Sbjct: 223  HGYLLKLGFGSCNSVVNSLIAFYFKGKRPESASELFDKLCDRDVISWNSMISGYVSNGLT 282

Query: 990  NEALDSFINMQ-SHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANAL 814
               L  +  M    I  D  T+  +L        L  G+ +H   ++S F      +N L
Sbjct: 283  ERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTL 342

Query: 813  MDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPDE 634
            +DMY KCG +  A  +F+K+  +++VSWT MIAGY   G+   AI   + M++ G+  D 
Sbjct: 343  LDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDV 402

Query: 633  VSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYKFIK 454
            V+ TSIL+AC+ SG LD G   ++ ++   N+   L     ++D+ A+ G +  A     
Sbjct: 403  VAITSILHACARSGSLDNGKDVHDYIKAN-NMASNLFVCNALMDMYAKCGSMEGANSVFS 461

Query: 453  RMPVQPDATIWGALLCG 403
             M V+ D   W  ++ G
Sbjct: 462  TMVVK-DIISWNTMVGG 477



 Score =  137 bits (345), Expect = 1e-29
 Identities = 84/318 (26%), Positives = 155/318 (48%), Gaps = 1/318 (0%)
 Frame = -3

Query: 1353 ERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKE 1174
            +  V  + + I  + + G  + A+++    +K  +E    T  S+L  CA   SL +GK+
Sbjct: 63   DHQVTDYNAKILHFCQLGDLENAMELVCMCQKSELETK--TYGSVLQLCAGLKSLTDGKK 120

Query: 1173 VHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCL 994
            VH  +K  ++G    +   L+  YA CG +++ + VF  M  K+++ WN M+  Y+K   
Sbjct: 121  VHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180

Query: 993  PNEALDSF-INMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANA 817
              E++  F I ++  I  +  T +C+L        L  G  +HGY+L+  F S   V N+
Sbjct: 181  FKESICLFKIMVEKGIEVNSYTFSCVLKCFAALGSLKEGECVHGYLLKLGFGSCNSVVNS 240

Query: 816  LMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPD 637
            L+  Y K      A  +FDK+  +D++SW  MI+GY   G     +  +K M   GI  D
Sbjct: 241  LIAFYFKGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVD 300

Query: 636  EVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYKFI 457
              +  S+L  C++SG L  G   +++     +   ++     ++D+ ++ G L  A +  
Sbjct: 301  LATIISVLVGCANSGTLSLGKAVHSLAIKS-SFERRINFSNTLLDMYSKCGDLDGALRVF 359

Query: 456  KRMPVQPDATIWGALLCG 403
            ++M  + +   W +++ G
Sbjct: 360  EKMG-ERNVVSWTSMIAG 376


>ref|XP_004294643.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 870

 Score =  723 bits (1865), Expect = 0.0
 Identities = 339/514 (65%), Positives = 421/514 (81%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            LAT++ VL ACS  GN++L R +H YA+K GFD  +   NS+LD YSKCGD+  AV +F+
Sbjct: 297  LATIINVLMACSDCGNVVLGRVVHGYAMKGGFDVDVVLCNSVLDMYSKCGDLSDAVRVFE 356

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
             M  RSVVSWTSMIAGY R+GLSD+AI++F +M   G+  D +T+TSILHACACSGSLE 
Sbjct: 357  KMGRRSVVSWTSMIAGYVREGLSDKAIELFCEMETDGVIPDVYTITSILHACACSGSLEK 416

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
            GK++H Y++E +M SSLFV N+LMDMYAKCGSMEDA +VFS M  KDI SWNTMIGGYSK
Sbjct: 417  GKDIHKYIREHDMDSSLFVCNSLMDMYAKCGSMEDADSVFSHMPMKDIVSWNTMIGGYSK 476

Query: 1002 NCLPNEALDSFINMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVA 823
            NCLPNEAL+ F +MQ   +PD +T+  +LP       LDRG+EIHGY+LR  +  D++VA
Sbjct: 477  NCLPNEALELFSDMQRKFKPDSMTLASVLPACASLAALDRGQEIHGYLLRHGYFLDQYVA 536

Query: 822  NALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGII 643
            NAL+DMYVKCG +++A+++F+ I  KD++S+T++IAGYGM+GFG EAIA F +M +A I 
Sbjct: 537  NALVDMYVKCGVLILARVLFEMIPVKDLISYTVIIAGYGMHGFGKEAIAAFNEMTKAEIE 596

Query: 642  PDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            PD +SF SILYACSHSGL+ EGWRF++IMRN+Y I P LEHYACMVDLLAR G LT+AYK
Sbjct: 597  PDSISFISILYACSHSGLVQEGWRFFDIMRNDYKIEPMLEHYACMVDLLARTGNLTKAYK 656

Query: 462  FIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEAEK 283
            FI  MP++PDAT+WG+LLCGCRI+H+VKLAEKVA+H+FELEPENTGYYILLANIYAEAEK
Sbjct: 657  FINMMPIEPDATVWGSLLCGCRIHHDVKLAEKVAEHVFELEPENTGYYILLANIYAEAEK 716

Query: 282  WEEVKKMREKIGMRGLKKNPGCSWIEIKGKVYIFVSGDNGLPEARKIQLFLKRLRKRMKE 103
            WEEVKK+RE+IG R LKKNPGCSWIEIKGKV IFV+G    P+A KI+  +K+ R RMKE
Sbjct: 717  WEEVKKLRERIGRRSLKKNPGCSWIEIKGKVNIFVAGGTSHPDAMKIESLVKKFRSRMKE 776

Query: 102  EGHSPNLTYALINADDREKEISLCGHSEKLAMAF 1
            +G++P + YALINAD+ EKE++LC HSEKLA+AF
Sbjct: 777  DGYNPKMQYALINADEVEKEVALCAHSEKLAIAF 810



 Score =  222 bits (566), Expect = 3e-55
 Identities = 133/395 (33%), Positives = 211/395 (53%), Gaps = 6/395 (1%)
 Frame = -3

Query: 1476 IHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNMEERSVVSWTSMIAGYARQGL 1297
            +H Y  K  F S     NSL+  Y K G +  A  +F  + ER VVSW SMI+ Y   G 
Sbjct: 218  VHGYLYKLRFGSDSNVVNSLMAFYFKNGRVESARKVFDALRERDVVSWNSMISAYVSNGA 277

Query: 1296 SDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKEVHDYVKERNMGSSLFVSNA 1117
             ++ I++FR+M   GI+ D  T+ ++L AC+  G++  G+ VH Y  +      + + N+
Sbjct: 278  PEKGIEIFREMVWSGIDVDLATIINVLMACSDCGNVVLGRVVHGYAMKGGFDVDVVLCNS 337

Query: 1116 LMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCLPNEALDSFINMQSH-IRPD 940
            ++DMY+KCG + DA  VF +M  + + SW +MI GY +  L ++A++ F  M++  + PD
Sbjct: 338  VLDMYSKCGDLSDAVRVFEKMGRRSVVSWTSMIAGYVREGLSDKAIELFCEMETDGVIPD 397

Query: 939  DVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALMDMYVKCGAMLMAQLIFD 760
              T+T IL        L++G++IH YI   +  S  FV N+LMDMY KCG+M  A  +F 
Sbjct: 398  VYTITSILHACACSGSLEKGKDIHKYIREHDMDSSLFVCNSLMDMYAKCGSMEDADSVFS 457

Query: 759  KIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILYACSHSGLLDE 580
             +  KDIVSW  MI GY      +EA+  F DM Q    PD ++  S+L AC+    LD 
Sbjct: 458  HMPMKDIVSWNTMIGGYSKNCLPNEALELFSDM-QRKFKPDSMTLASVLPACASLAALDR 516

Query: 579  GWRFYN-IMRNEYNIVPKLEHYA--CMVDLLARAGKLTEAYKFIKRMPVQPDATIWGALL 409
            G   +  ++R+ Y     L+ Y    +VD+  + G L  A    + +PV+ D   +  ++
Sbjct: 517  GQEIHGYLLRHGY----FLDQYVANALVDMYVKCGVLILARVLFEMIPVK-DLISYTVII 571

Query: 408  CGCRIYHEVKLAEKVADHI--FELEPENTGYYILL 310
             G  ++   K A    + +   E+EP++  +  +L
Sbjct: 572  AGYGMHGFGKEAIAAFNEMTKAEIEPDSISFISIL 606



 Score =  198 bits (503), Expect = 6e-48
 Identities = 118/375 (31%), Positives = 193/375 (51%), Gaps = 1/375 (0%)
 Frame = -3

Query: 1524 VLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNMEERS 1345
            VL  C+   +L   + +H    + G +        L+  Y  CGD+  A  +F  + +R 
Sbjct: 101  VLELCAGNKSLKDGKRVHSVLCEHGVNVDGYVGAKLVFMYVHCGDLREARRVFDALSDRK 160

Query: 1344 VVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKEVHD 1165
            V  W  MI  YA+     E + +F  M + G+E +++T + +    A  G +  G+ VH 
Sbjct: 161  VFLWNLMINEYAKVRDFREGVCLFGKMVECGVELNSYTFSCVFKCFAALGCVREGEWVHG 220

Query: 1164 YVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCLPNE 985
            Y+ +   GS   V N+LM  Y K G +E A+ VF  +  +D+ SWN+MI  Y  N  P +
Sbjct: 221  YLYKLRFGSDSNVVNSLMAFYFKNGRVESARKVFDALRERDVVSWNSMISAYVSNGAPEK 280

Query: 984  ALDSFINM-QSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALMD 808
             ++ F  M  S I  D  T+  +L        +  GR +HGY ++  F  D  + N+++D
Sbjct: 281  GIEIFREMVWSGIDVDLATIINVLMACSDCGNVVLGRVVHGYAMKGGFDVDVVLCNSVLD 340

Query: 807  MYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPDEVS 628
            MY KCG +  A  +F+K+  + +VSWT MIAGY   G   +AI  F +M+  G+IPD  +
Sbjct: 341  MYSKCGDLSDAVRVFEKMGRRSVVSWTSMIAGYVREGLSDKAIELFCEMETDGVIPDVYT 400

Query: 627  FTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYKFIKRM 448
             TSIL+AC+ SG L++G   +  +R E+++   L     ++D+ A+ G + +A      M
Sbjct: 401  ITSILHACACSGSLEKGKDIHKYIR-EHDMDSSLFVCNSLMDMYAKCGSMEDADSVFSHM 459

Query: 447  PVQPDATIWGALLCG 403
            P++ D   W  ++ G
Sbjct: 460  PMK-DIVSWNTMIGG 473



 Score =  133 bits (334), Expect = 2e-28
 Identities = 87/321 (27%), Positives = 160/321 (49%), Gaps = 2/321 (0%)
 Frame = -3

Query: 1290 EAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKEVHDYVKERNMGSSLFVSNALM 1111
            EA++M        +++ A+   S+L  CA + SL++GK VH  + E  +    +V   L+
Sbjct: 80   EAVEMVCGSESSDLDSAAYC--SVLELCAGNKSLKDGKRVHSVLCEHGVNVDGYVGAKLV 137

Query: 1110 DMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCLPNEALDSFINM-QSHIRPDDV 934
             MY  CG + +A+ VF  ++ + +F WN MI  Y+K     E +  F  M +  +  +  
Sbjct: 138  FMYVHCGDLREARRVFDALSDRKVFLWNLMINEYAKVRDFREGVCLFGKMVECGVELNSY 197

Query: 933  TVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALMDMYVKCGAMLMAQLIFDKI 754
            T +C+         +  G  +HGY+ +  F SD  V N+LM  Y K G +  A+ +FD +
Sbjct: 198  TFSCVFKCFAALGCVREGEWVHGYLYKLRFGSDSNVVNSLMAFYFKNGRVESARKVFDAL 257

Query: 753  ASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILYACSHSGLLDEGW 574
              +D+VSW  MI+ Y   G   + I  F++M  +GI  D  +  ++L ACS  G +  G 
Sbjct: 258  RERDVVSWNSMISAYVSNGAPEKGIEIFREMVWSGIDVDLATIINVLMACSDCGNVVLGR 317

Query: 573  RFYN-IMRNEYNIVPKLEHYACMVDLLARAGKLTEAYKFIKRMPVQPDATIWGALLCGCR 397
              +   M+  +++   L +   ++D+ ++ G L++A +  ++M  +     W +++ G  
Sbjct: 318  VVHGYAMKGGFDVDVVLCN--SVLDMYSKCGDLSDAVRVFEKMG-RRSVVSWTSMIAG-- 372

Query: 396  IYHEVKLAEKVADHIFELEPE 334
             Y    L++K  +   E+E +
Sbjct: 373  -YVREGLSDKAIELFCEMETD 392


>gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  690 bits (1780), Expect = 0.0
 Identities = 329/515 (63%), Positives = 411/515 (79%), Gaps = 1/515 (0%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            LAT++ VL  C+  G L L + +H  AIK+ F+ +I F+N+LLD YSKCGD+ GA+ +F+
Sbjct: 113  LATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFE 172

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
             M ER+VVSWTSMIAGY R G SD AI + + M K G++ D   +TSILHACA SGSL+N
Sbjct: 173  KMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDN 232

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
            GK+VHDY+K  NM S+LFV NALMDMYAKCGSME A +VFS M  KDI SWNTM+G    
Sbjct: 233  GKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG---- 288

Query: 1002 NCLPNEALDSFINMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVA 823
                             ++PD  T+ CILP       L+RG+EIHGYILR+ +SSDR VA
Sbjct: 289  ----------------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVA 332

Query: 822  NALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGII 643
            NAL+D+YVKCG + +A+L+FD I SKD+VSWT+MIAGYGM+G+G+EAIATF +M+ AGI 
Sbjct: 333  NALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE 392

Query: 642  PDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            PDEVSF SILYACSHSGLL++GWRF+ IM+N++NI PKLEHYACMVDLL+R G L++AYK
Sbjct: 393  PDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYK 452

Query: 462  FIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEAEK 283
            FI+ +P+ PDATIWGALLCGCRIYH+++LAEKVA+ +FELEPENTGYY+LLANIYAEAEK
Sbjct: 453  FIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEK 512

Query: 282  WEEVKKMREKIGMRGLKKNPGCSWIEIKGKVYIFVSGDNGL-PEARKIQLFLKRLRKRMK 106
            WEEVK+MREKIG +GL+KNPGCSWIEIKG+V +FVSG+N   P ++KI+  LK++R++MK
Sbjct: 513  WEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMK 572

Query: 105  EEGHSPNLTYALINADDREKEISLCGHSEKLAMAF 1
            EEG+ P   YALINAD+ +KE++LCGHSEKLAMAF
Sbjct: 573  EEGYFPKTKYALINADEMQKEMALCGHSEKLAMAF 607



 Score =  184 bits (467), Expect = 9e-44
 Identities = 116/364 (31%), Positives = 179/364 (49%), Gaps = 23/364 (6%)
 Frame = -3

Query: 1425 NSLLDAYSKCGDMHGAVCIFKNMEE--------------------RSVVSWTSMIAGYAR 1306
            N ++  Y+K GD   ++C+FK M E                    R V+SW SMI+GY  
Sbjct: 31   NFMVSEYAKIGDFKESICLFKIMVEKGIEGKRSESASELFDKLCDRDVISWNSMISGYVS 90

Query: 1305 QGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKEVHDYVKERNMGSSLFV 1126
             GL++  + +++ M   GI+ D  T+ S+L  CA SG+L  GK VH    + +    +  
Sbjct: 91   NGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINF 150

Query: 1125 SNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCLPNEALDSFINMQSH-I 949
            SN L+DMY+KCG ++ A  VF +M  +++ SW +MI GY+++   + A+     M+   +
Sbjct: 151  SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGV 210

Query: 948  RPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALMDMYVKCGAMLMAQL 769
            + D V +T IL        LD G+++H YI  +  +S+ FV NALMDMY KCG+M  A  
Sbjct: 211  KLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANS 270

Query: 768  IFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILYACSHSGL 589
            +F  +  KDI+SW  M+                 ++K     PD  +   IL AC+    
Sbjct: 271  VFSTMVVKDIISWNTMVG----------------ELK-----PDSRTMACILPACASLSA 309

Query: 588  LDEGWRFYN-IMRNEYNIVPKLEHYA-CMVDLLARAGKLTEAYKFIKRMPVQPDATIWGA 415
            L+ G   +  I+RN Y+      H A  +VDL  + G L  A      +P   D   W  
Sbjct: 310  LERGKEIHGYILRNGYS---SDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTV 365

Query: 414  LLCG 403
            ++ G
Sbjct: 366  MIAG 369


>gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  684 bits (1766), Expect = 0.0
 Identities = 326/515 (63%), Positives = 410/515 (79%), Gaps = 1/515 (0%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            LAT++ VL  C+  G L L + +H  AIK+ F+ +I F+N+LLD YSKCGD+ GA+ +F+
Sbjct: 251  LATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFE 310

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
             M ER+VVSWTSMIAGY R G SD AI++ + M K G++ D   +TSILHACA SGSL+N
Sbjct: 311  KMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDN 370

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
            GK+VHDY+K  NM S+LFV NALMDMYAKCGSME A +VFS M  KDI SWNTMIG    
Sbjct: 371  GKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG---- 426

Query: 1002 NCLPNEALDSFINMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVA 823
                             ++PD  T+ C+LP       L+RG+EIHGYILR+ +SSDR VA
Sbjct: 427  ----------------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVA 470

Query: 822  NALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGII 643
            NAL+D+YVKCG + +A+L+FD I SKD+VSWT+MIAGYGM+G+G+EAIATF +M+ AGI 
Sbjct: 471  NALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE 530

Query: 642  PDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            PDEVSF SILYACSHSGLL++GWRF+ IM+N++NI PKLEHYACMVDLL+R G L++AY+
Sbjct: 531  PDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYE 590

Query: 462  FIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEAEK 283
            F++ +P+ PDATIWGALLCGCR YH+++LAEKVA+ +FELEPENTGYY+LLANIYAEAEK
Sbjct: 591  FMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEK 650

Query: 282  WEEVKKMREKIGMRGLKKNPGCSWIEIKGKVYIFVSGDNGL-PEARKIQLFLKRLRKRMK 106
            WEEVK++REKIG +GL+KNPGCSWIEIKGKV +FVSG+N   P ++ I+  LK++R++MK
Sbjct: 651  WEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMK 710

Query: 105  EEGHSPNLTYALINADDREKEISLCGHSEKLAMAF 1
            EEGH P   YALINAD+ +KE++LCGHSEKLAMAF
Sbjct: 711  EEGHFPKTKYALINADEMQKEMALCGHSEKLAMAF 745



 Score =  185 bits (470), Expect = 4e-44
 Identities = 116/364 (31%), Positives = 178/364 (48%), Gaps = 23/364 (6%)
 Frame = -3

Query: 1425 NSLLDAYSKCGDMHGAVCIFKNMEE--------------------RSVVSWTSMIAGYAR 1306
            N ++  Y+K GD   ++C+FK M E                    R V+SW SMI+GY  
Sbjct: 169  NFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVS 228

Query: 1305 QGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKEVHDYVKERNMGSSLFV 1126
             GL++  + +++ M   GI+ D  T+ S+L  CA SG+L  GK VH    + +    +  
Sbjct: 229  NGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINF 288

Query: 1125 SNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCLPNEALDSFINMQSH-I 949
            SN L+DMY+KCG ++ A  VF +M  +++ SW +MI GY+++   + A+     M+   +
Sbjct: 289  SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGV 348

Query: 948  RPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALMDMYVKCGAMLMAQL 769
            + D V +T IL        LD G+++H YI  +   S+ FV NALMDMY KCG+M  A  
Sbjct: 349  KLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANS 408

Query: 768  IFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILYACSHSGL 589
            +F  +  KDI+SW  MI                 ++K     PD  +   +L AC+    
Sbjct: 409  VFSTMVVKDIISWNTMIG----------------ELK-----PDSRTMACVLPACASLSA 447

Query: 588  LDEGWRFYN-IMRNEYNIVPKLEHYA-CMVDLLARAGKLTEAYKFIKRMPVQPDATIWGA 415
            L+ G   +  I+RN Y+      H A  +VDL  + G L  A      +P   D   W  
Sbjct: 448  LERGKEIHGYILRNGYS---SDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTV 503

Query: 414  LLCG 403
            ++ G
Sbjct: 504  MIAG 507



 Score =  129 bits (323), Expect = 4e-27
 Identities = 95/367 (25%), Positives = 159/367 (43%), Gaps = 52/367 (14%)
 Frame = -3

Query: 1353 ERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKE 1174
            +  V  + + I  + + G  + A+++    +K  +E    T  S+L  CA   S  +GK+
Sbjct: 63   DHQVTDYNAKILHFCQLGDLENAMELICMCQKSELETK--TYGSVLQLCAGLKSFTDGKK 120

Query: 1173 VHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK--- 1003
            VH  +K  ++G    +   L+  YA CG +++ + VF  M  K+++ WN M+  Y+K   
Sbjct: 121  VHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180

Query: 1002 ----NCL-------------PNEALDSFIN------------------------------ 964
                 CL             P  A + F                                
Sbjct: 181  FKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240

Query: 963  --MQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALMDMYVKCG 790
              M   I  D  T+  +L        L  G+ +H   ++S F      +N L+DMY KCG
Sbjct: 241  QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300

Query: 789  AMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILY 610
             +  A  +F+K+  +++VSWT MIAGY   G    AI   + M++ G+  D V+ TSIL+
Sbjct: 301  DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILH 360

Query: 609  ACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYKFIKRMPVQPDA 430
            AC+ SG LD G   ++ ++   N+   L     ++D+ A+ G +  A      M V+ D 
Sbjct: 361  ACARSGSLDNGKDVHDYIKAN-NMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVK-DI 418

Query: 429  TIWGALL 409
              W  ++
Sbjct: 419  ISWNTMI 425


>gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  684 bits (1766), Expect = 0.0
 Identities = 327/515 (63%), Positives = 410/515 (79%), Gaps = 1/515 (0%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            LAT++ VL  C+  G L L + +H  AIK+ F+ +I F+N+LLD YSKCGD+ GA+ +F+
Sbjct: 251  LATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFE 310

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
             M ER+VVSWTSMIAGY R G SD AI++ + M K G++ D    TSILHACA SGSL+N
Sbjct: 311  KMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDN 370

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
            GK+VHDY+K  NM S+LFV NALMDMY KCGSM+ A +VFS M  KDI SWNTMIG    
Sbjct: 371  GKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIG---- 426

Query: 1002 NCLPNEALDSFINMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVA 823
                             ++PD  T+ CILP       L+RG+EIHGYILR+ +SSDR VA
Sbjct: 427  ----------------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVA 470

Query: 822  NALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGII 643
            NAL+D+YVKCG + +A+L+FD I SKD+VSWT+MI+GYGM+G+G+EAIATF +M+ AGI 
Sbjct: 471  NALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIE 530

Query: 642  PDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            PDEVSF SILYACSHSGLL++GWRF+ IM+N++NI PKLEHYACMVDLL+R G L++AY+
Sbjct: 531  PDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYE 590

Query: 462  FIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEAEK 283
            FI+ +P+ PDATIWGALLCGCRIYH+++LAEKVA+ +FELEPENTGYY+LLANIYAEAEK
Sbjct: 591  FIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEK 650

Query: 282  WEEVKKMREKIGMRGLKKNPGCSWIEIKGKVYIFVSGDNGL-PEARKIQLFLKRLRKRMK 106
            WEEVK+MREKIG +GL+KNPGCSWIEIKGKV +FVSG+N   P ++KI+  LK++R++MK
Sbjct: 651  WEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMK 710

Query: 105  EEGHSPNLTYALINADDREKEISLCGHSEKLAMAF 1
            EEG+ P   YALINAD+ +KE++LCGHSEKLAMAF
Sbjct: 711  EEGYFPKTKYALINADEMQKEMALCGHSEKLAMAF 745



 Score =  184 bits (466), Expect = 1e-43
 Identities = 117/364 (32%), Positives = 177/364 (48%), Gaps = 23/364 (6%)
 Frame = -3

Query: 1425 NSLLDAYSKCGDMHGAVCIFKNMEE--------------------RSVVSWTSMIAGYAR 1306
            N ++  Y+K GD   ++C+FK M E                    R V+SW SMI+GY  
Sbjct: 169  NFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVS 228

Query: 1305 QGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKEVHDYVKERNMGSSLFV 1126
             GL++  +++++ M   GI+ D  T+ S+L  CA SG+L  GK VH    +      +  
Sbjct: 229  NGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINF 288

Query: 1125 SNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCLPNEALDSFINMQSH-I 949
            SN L+DMY+KCG ++ A  VF +M  +++ SW +MI GY+++   + A+     M+   +
Sbjct: 289  SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGV 348

Query: 948  RPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALMDMYVKCGAMLMAQL 769
            + D V  T IL        LD G+++H YI  +   S+ FV NALMDMY KCG+M  A  
Sbjct: 349  KLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANS 408

Query: 768  IFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILYACSHSGL 589
            +F  +  KDI+SW  MI                 ++K     PD  +   IL AC+    
Sbjct: 409  VFSTMVVKDIISWNTMIG----------------ELK-----PDSRTMACILPACASLSA 447

Query: 588  LDEGWRFYN-IMRNEYNIVPKLEHYA-CMVDLLARAGKLTEAYKFIKRMPVQPDATIWGA 415
            L+ G   +  I+RN Y+      H A  +VDL  + G L  A      +P   D   W  
Sbjct: 448  LERGKEIHGYILRNGYS---SDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTV 503

Query: 414  LLCG 403
            ++ G
Sbjct: 504  MISG 507



 Score =  137 bits (346), Expect = 9e-30
 Identities = 98/367 (26%), Positives = 161/367 (43%), Gaps = 52/367 (14%)
 Frame = -3

Query: 1353 ERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKE 1174
            +R V  + + I  + + G  + A+++    +K  +E    T +S+L  CA S SL +GK+
Sbjct: 63   DRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETK--TYSSVLQLCAGSKSLTDGKK 120

Query: 1173 VHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAK----------------- 1045
            VH  +K  N+     +   L+ +YA CG +++ + VF  M  K                 
Sbjct: 121  VHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180

Query: 1044 ----------------------------------DIFSWNTMIGGYSKNCLPNEALDSFI 967
                                              D+ SWN+MI GY  N L    L+ + 
Sbjct: 181  FKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYK 240

Query: 966  NMQ-SHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALMDMYVKCG 790
             M    I  D  T+  +L        L  G+ +H   ++S F      +N L+DMY KCG
Sbjct: 241  QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCG 300

Query: 789  AMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILY 610
             +  A  +F+K+  +++VSWT MIAGY   G    AI   + M++ G+  D V+ TSIL+
Sbjct: 301  DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILH 360

Query: 609  ACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYKFIKRMPVQPDA 430
            AC+ SG LD G   ++ ++   N+   L     ++D+  + G +  A      M V+ D 
Sbjct: 361  ACARSGSLDNGKDVHDYIKAN-NMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVK-DI 418

Query: 429  TIWGALL 409
              W  ++
Sbjct: 419  ISWNTMI 425


>gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  684 bits (1765), Expect = 0.0
 Identities = 328/515 (63%), Positives = 410/515 (79%), Gaps = 1/515 (0%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            LAT++ VL  C+  G L L + +H  AIK+ F+ +I F+N+LLD YSKCGD+ GA+ +F+
Sbjct: 251  LATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFE 310

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
             M ER+VVSWTSMIAGY R G SD AI + + M K G++ D   +TSILHACA SGSL+N
Sbjct: 311  KMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDN 370

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
            GK+VHDY+K  NM S+LFV NALMDMYAKCGSME A +VFS M  KDI SWNTM+G    
Sbjct: 371  GKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG---- 426

Query: 1002 NCLPNEALDSFINMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVA 823
                             ++PD  T+ CILP       L+RG+EIHGYILR+ +SSDR VA
Sbjct: 427  ----------------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVA 470

Query: 822  NALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGII 643
            NAL+D+YVKCG + +A+L+FD I SKD+VSWT+MIAGYGM+G+G+EAIATF +M+ AGI 
Sbjct: 471  NALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE 530

Query: 642  PDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            PDEVSF SILYACSHSGLL++GWRF+ IM+N++NI PKLEHYACMVDLL+R G L++AYK
Sbjct: 531  PDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYK 590

Query: 462  FIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEAEK 283
            FI+ +P+ PDATIWGALLCGCRIYH+++LAEKVA+ +FELEPENTGYY+LLANIYAEAEK
Sbjct: 591  FIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEK 650

Query: 282  WEEVKKMREKIGMRGLKKNPGCSWIEIKGKVYIFVSGDNGL-PEARKIQLFLKRLRKRMK 106
             EEVK+MREKIG +GL+KNPGCSWIEIKG+V +FVSG+N   P ++KI+  LK++R++MK
Sbjct: 651  REEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMK 710

Query: 105  EEGHSPNLTYALINADDREKEISLCGHSEKLAMAF 1
            EEG+ P   YALINAD+ +KE++LCGHSEKLAMAF
Sbjct: 711  EEGYFPKTKYALINADEMQKEMALCGHSEKLAMAF 745



 Score =  184 bits (467), Expect = 9e-44
 Identities = 116/364 (31%), Positives = 179/364 (49%), Gaps = 23/364 (6%)
 Frame = -3

Query: 1425 NSLLDAYSKCGDMHGAVCIFKNMEE--------------------RSVVSWTSMIAGYAR 1306
            N ++  Y+K GD   ++C+FK M E                    R V+SW SMI+GY  
Sbjct: 169  NFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVS 228

Query: 1305 QGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKEVHDYVKERNMGSSLFV 1126
             GL++  + +++ M   GI+ D  T+ S+L  CA SG+L  GK VH    + +    +  
Sbjct: 229  NGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINF 288

Query: 1125 SNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCLPNEALDSFINMQSH-I 949
            SN L+DMY+KCG ++ A  VF +M  +++ SW +MI GY+++   + A+     M+   +
Sbjct: 289  SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGV 348

Query: 948  RPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALMDMYVKCGAMLMAQL 769
            + D V +T IL        LD G+++H YI  +  +S+ FV NALMDMY KCG+M  A  
Sbjct: 349  KLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANS 408

Query: 768  IFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILYACSHSGL 589
            +F  +  KDI+SW  M+                 ++K     PD  +   IL AC+    
Sbjct: 409  VFSTMVVKDIISWNTMVG----------------ELK-----PDSRTMACILPACASLSA 447

Query: 588  LDEGWRFYN-IMRNEYNIVPKLEHYA-CMVDLLARAGKLTEAYKFIKRMPVQPDATIWGA 415
            L+ G   +  I+RN Y+      H A  +VDL  + G L  A      +P   D   W  
Sbjct: 448  LERGKEIHGYILRNGYS---SDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTV 503

Query: 414  LLCG 403
            ++ G
Sbjct: 504  MIAG 507



 Score =  131 bits (330), Expect = 7e-28
 Identities = 95/367 (25%), Positives = 159/367 (43%), Gaps = 52/367 (14%)
 Frame = -3

Query: 1353 ERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKE 1174
            +  V  + + I  + + G  + A+++    +K  +E    T  S+L  CA   SL +GK+
Sbjct: 63   DHQVTDYNAKILHFCQLGDLENAMELVCMCQKSELETK--TYGSVLQLCAGLKSLTDGKK 120

Query: 1173 VHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSW------------ 1030
            VH  +K  ++G    +   L+  YA CG +++ + VF  M  K+++ W            
Sbjct: 121  VHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180

Query: 1029 ---------------------------------------NTMIGGYSKNCLPNEALDSFI 967
                                                   N+MI GY  N L    L  + 
Sbjct: 181  FKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240

Query: 966  NMQ-SHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALMDMYVKCG 790
             M    I  D  T+  +L        L  G+ +H   ++S F      +N L+DMY KCG
Sbjct: 241  QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300

Query: 789  AMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILY 610
             +  A  +F+K+  +++VSWT MIAGY   G+   AI   + M++ G+  D V+ TSIL+
Sbjct: 301  DLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILH 360

Query: 609  ACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYKFIKRMPVQPDA 430
            AC+ SG LD G   ++ ++   N+   L     ++D+ A+ G +  A      M V+ D 
Sbjct: 361  ACARSGSLDNGKDVHDYIKAN-NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK-DI 418

Query: 429  TIWGALL 409
              W  ++
Sbjct: 419  ISWNTMV 425


>gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  684 bits (1765), Expect = 0.0
 Identities = 326/515 (63%), Positives = 410/515 (79%), Gaps = 1/515 (0%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            LAT++ VL  C+  G L L + +H  AIK+ F+ +I F+N+LLD YSKCGD+ GA+ +F+
Sbjct: 251  LATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFE 310

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
             M ER+VVSWTSMIAGY R G SD AI++ + M K G++ D   +TSILHACA SGSL+N
Sbjct: 311  KMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDN 370

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
            GK+VHDY+K  NM S+LFV NALMDMYAKCGSME A +VFS M  KDI SWNTMIG    
Sbjct: 371  GKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG---- 426

Query: 1002 NCLPNEALDSFINMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVA 823
                             ++PD  T+ C+LP       L+RG+EIHGYILR+ +SSDR VA
Sbjct: 427  ----------------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVA 470

Query: 822  NALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGII 643
            NAL+D+YVKCG + +A+L+FD I SKD+VSWT+MIAGYGM+G+G+EAIATF +M+ AGI 
Sbjct: 471  NALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE 530

Query: 642  PDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            PDEVSF SILYACSHSGLL++GWRF+ IM+N++NI PKLEHYACMVDLL+R G L++AY+
Sbjct: 531  PDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYE 590

Query: 462  FIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEAEK 283
            FI+ +P+ PDATIWGALLCGCR YH+++LAEKVA+ +FELEPEN+GYY+LLANIYAEAEK
Sbjct: 591  FIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEK 650

Query: 282  WEEVKKMREKIGMRGLKKNPGCSWIEIKGKVYIFVSGDNGL-PEARKIQLFLKRLRKRMK 106
            WEEVK++REKIG +GL+KNPGCSWIEIKGKV +FVSG+N   P ++ I+  LK++R++MK
Sbjct: 651  WEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMK 710

Query: 105  EEGHSPNLTYALINADDREKEISLCGHSEKLAMAF 1
            EEGH P   YALINAD+ +KE++LCGHSEKLAMAF
Sbjct: 711  EEGHFPKTKYALINADEMQKEMALCGHSEKLAMAF 745



 Score =  185 bits (470), Expect = 4e-44
 Identities = 116/364 (31%), Positives = 178/364 (48%), Gaps = 23/364 (6%)
 Frame = -3

Query: 1425 NSLLDAYSKCGDMHGAVCIFKNMEE--------------------RSVVSWTSMIAGYAR 1306
            N ++  Y+K GD   ++C+FK M E                    R V+SW SMI+GY  
Sbjct: 169  NFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVS 228

Query: 1305 QGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKEVHDYVKERNMGSSLFV 1126
             GL++  + +++ M   GI+ D  T+ S+L  CA SG+L  GK VH    + +    +  
Sbjct: 229  NGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINF 288

Query: 1125 SNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCLPNEALDSFINMQSH-I 949
            SN L+DMY+KCG ++ A  VF +M  +++ SW +MI GY+++   + A+     M+   +
Sbjct: 289  SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGV 348

Query: 948  RPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALMDMYVKCGAMLMAQL 769
            + D V +T IL        LD G+++H YI  +   S+ FV NALMDMY KCG+M  A  
Sbjct: 349  KLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANS 408

Query: 768  IFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILYACSHSGL 589
            +F  +  KDI+SW  MI                 ++K     PD  +   +L AC+    
Sbjct: 409  VFSTMVVKDIISWNTMIG----------------ELK-----PDSRTMACVLPACASLSA 447

Query: 588  LDEGWRFYN-IMRNEYNIVPKLEHYA-CMVDLLARAGKLTEAYKFIKRMPVQPDATIWGA 415
            L+ G   +  I+RN Y+      H A  +VDL  + G L  A      +P   D   W  
Sbjct: 448  LERGKEIHGYILRNGYS---SDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTV 503

Query: 414  LLCG 403
            ++ G
Sbjct: 504  MIAG 507



 Score =  130 bits (328), Expect = 1e-27
 Identities = 95/367 (25%), Positives = 160/367 (43%), Gaps = 52/367 (14%)
 Frame = -3

Query: 1353 ERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKE 1174
            +  V  + + I  + + G  + A+++    +K  +E    T +S+L  CA   S  +GK+
Sbjct: 63   DHQVTDYNAKILHFCQLGDLENAMELICMCKKSELETK--TYSSVLQLCAGLKSFTDGKK 120

Query: 1173 VHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK--- 1003
            VH  +K  ++G    +   L+  YA CG +++ + VF  M  K+++ WN M+  Y+K   
Sbjct: 121  VHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180

Query: 1002 ----NCL-------------PNEALDSFIN------------------------------ 964
                 CL             P  A + F                                
Sbjct: 181  FKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240

Query: 963  --MQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALMDMYVKCG 790
              M   I  D  T+  +L        L  G+ +H   ++S F      +N L+DMY KCG
Sbjct: 241  QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300

Query: 789  AMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILY 610
             +  A  +F+K+  +++VSWT MIAGY   G    AI   + M++ G+  D V+ TSIL+
Sbjct: 301  DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILH 360

Query: 609  ACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYKFIKRMPVQPDA 430
            AC+ SG LD G   ++ ++   N+   L     ++D+ A+ G +  A      M V+ D 
Sbjct: 361  ACARSGSLDNGKDVHDYIKAN-NMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVK-DI 418

Query: 429  TIWGALL 409
              W  ++
Sbjct: 419  ISWNTMI 425


>ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297315860|gb|EFH46283.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 871

 Score =  682 bits (1761), Expect = 0.0
 Identities = 322/515 (62%), Positives = 411/515 (79%), Gaps = 2/515 (0%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            LAT+V V A C+    + L R +H + +KA F  +  F N+LLD YSKCGD+  A  +F+
Sbjct: 296  LATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFR 355

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
             M  RSVVS+TSMIAGYAR+GL+ EA+++F +M + GI  D +TVT++L+ CA +  L+ 
Sbjct: 356  EMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDE 415

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
            GK VH+++KE +MG  +FVSNALMDMYAKCGSM +A+ VFS+M  KDI SWNT+IGGYSK
Sbjct: 416  GKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSK 475

Query: 1002 NCLPNEALDSF--INMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRF 829
            NC  NEAL  F  + ++    PD+ TV C+LP        D+GREIHGYI+R+ + SDR 
Sbjct: 476  NCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH 535

Query: 828  VANALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAG 649
            VAN+L+DMY KCGA+L+A+L+FD I SKD+VSWT+MIAGYGM+GFG EAIA F  M+QAG
Sbjct: 536  VANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG 595

Query: 648  IIPDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEA 469
            I PDE+SF S+LYACSHSGL+DEGWRF+NIMR+E  I P +EHYAC+VD+LAR G L++A
Sbjct: 596  IEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKA 655

Query: 468  YKFIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEA 289
            Y+FI+ MP+ PDATIWGALLCGCRI+H+VKLAE+VA+ +FELEPENTGYY+L+ANIYAEA
Sbjct: 656  YRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEA 715

Query: 288  EKWEEVKKMREKIGMRGLKKNPGCSWIEIKGKVYIFVSGDNGLPEARKIQLFLKRLRKRM 109
            EKWEEVK++R++IG RGL+KNPGCSWIEIKG+V IFV+GD+  PE  KI+ FL+ +R RM
Sbjct: 716  EKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARM 775

Query: 108  KEEGHSPNLTYALINADDREKEISLCGHSEKLAMA 4
             EEG+SP   YALI+A++ EKE +LCGHSEKLAMA
Sbjct: 776  IEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMA 810



 Score =  184 bits (468), Expect = 7e-44
 Identities = 108/380 (28%), Positives = 194/380 (51%), Gaps = 2/380 (0%)
 Frame = -3

Query: 1536 TMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNM 1357
            T+  VL  C+   +L   + +  +    GF       + L   Y+ CGD+  A  +F  +
Sbjct: 96   TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQV 155

Query: 1356 EERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGK 1177
            +    + W  ++   A+ G    +I +F+ M   G+E D++T + +  + +   S+  G+
Sbjct: 156  KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGE 215

Query: 1176 EVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNC 997
            ++H Y+ +   G    V N+L+  Y K   ++ A+ VF +MT +D+ SWN++I GY  N 
Sbjct: 216  QLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNG 275

Query: 996  LPNEALDSFINMQ-SHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVAN 820
            L  + L  F+ M  S I  D  T+  +         +  GR +H + +++ FS +    N
Sbjct: 276  LAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCN 335

Query: 819  ALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIP 640
             L+DMY KCG +  A+++F +++ + +VS+T MIAGY   G   EA+  F++M++ GI P
Sbjct: 336  TLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395

Query: 639  DEVSFTSILYACSHSGLLDEGWRFYN-IMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            D  + T++L  C+ + LLDEG R +  I  N+      + +   ++D+ A+ G + EA  
Sbjct: 396  DVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSN--ALMDMYAKCGSMREAEL 453

Query: 462  FIKRMPVQPDATIWGALLCG 403
                M V+ D   W  ++ G
Sbjct: 454  VFSEMRVK-DIISWNTVIGG 472



 Score =  123 bits (309), Expect = 2e-25
 Identities = 100/400 (25%), Positives = 176/400 (44%), Gaps = 34/400 (8%)
 Frame = -3

Query: 1353 ERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKE 1174
            +RSV    + +  +   G    A+++     K  I  D  T+ S+L  CA S SL++GKE
Sbjct: 58   DRSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDI--DPRTLCSVLQLCADSKSLKDGKE 115

Query: 1173 VHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCL 994
            V ++++         + + L  MY  CG +++A  VF Q+  +    WN ++   +K+  
Sbjct: 116  VDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGD 175

Query: 993  PNEALDSFINMQSH-IRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANA 817
             + ++  F  M S  +  D  T +C+         ++ G ++HGYIL+S F     V N+
Sbjct: 176  FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNS 235

Query: 816  LMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPD 637
            L+  Y+K   +  A+ +FD++  +D++SW  +I GY   G   + ++ F  M  +GI  D
Sbjct: 236  LVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEID 295

Query: 636  EVSFTSILYACSHSGLLDEGW---------------RFYNIMRNEYNIVPKLE------- 523
              +  S+   C+ S L+  G                RF N + + Y+    L+       
Sbjct: 296  LATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFR 355

Query: 522  --------HYACMVDLLARAGKLTEAYKFIKRMP---VQPDATIWGALLCGCRIYHEVKL 376
                     Y  M+   AR G   EA K  + M    + PD     A+L  C     +  
Sbjct: 356  EMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDE 415

Query: 375  AEKVADHIFELEPENTGYYILLANIYAEAEKWEEVKKMRE 256
             ++V + I E    + G+ I ++N  A  + + +   MRE
Sbjct: 416  GKRVHEWIKE---NDMGFDIFVSN--ALMDMYAKCGSMRE 450


>ref|XP_006597484.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 873

 Score =  680 bits (1754), Expect = 0.0
 Identities = 320/514 (62%), Positives = 410/514 (79%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            LAT+V  +AAC+ +G+L L R +H   +KA F  ++ FNN+LLD YSKCG+++ A+  F+
Sbjct: 300  LATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFE 359

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
             M +++VVSWTS+IA Y R+GL D+AI++F +M  +G+  D +++TS+LHACAC  SL+ 
Sbjct: 360  KMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDK 419

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
            G++VH+Y+++ NM   L VSNALMDMYAKCGSME+A  VFSQ+  KDI SWNTMIGGYSK
Sbjct: 420  GRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSK 479

Query: 1002 NCLPNEALDSFINMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVA 823
            N LPNEAL  F  MQ   RPD +T+ C+LP       L+ GR IHG ILR+ +SS+  VA
Sbjct: 480  NSLPNEALKLFAEMQKESRPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVA 539

Query: 822  NALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGII 643
            NAL+DMYVKCG+++ A+L+FD I  KD+++WT+MI+G GM+G G+EAIATF+ M+ AGI 
Sbjct: 540  NALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIK 599

Query: 642  PDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            PDE++FTSILYACSHSGLL+EGW F+N M +E N+ PKLEHYACMVDLLAR G L++AY 
Sbjct: 600  PDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYN 659

Query: 462  FIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEAEK 283
             I+ MP++PDATIWGALLCGCRI+H+V+LAEKVA+H+FELEP+N GYY+LLANIYAEAEK
Sbjct: 660  LIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEK 719

Query: 282  WEEVKKMREKIGMRGLKKNPGCSWIEIKGKVYIFVSGDNGLPEARKIQLFLKRLRKRMKE 103
            WEEVKK+RE+IG RGLKK+PGCSWIE++GK   FVS D   P+A+ I   L  LR +MK 
Sbjct: 720  WEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKN 779

Query: 102  EGHSPNLTYALINADDREKEISLCGHSEKLAMAF 1
            EGHSP + YALINA D EKE++LCGHSEKLAMAF
Sbjct: 780  EGHSPKMRYALINAGDMEKEVALCGHSEKLAMAF 813



 Score =  212 bits (540), Expect = 3e-52
 Identities = 126/384 (32%), Positives = 199/384 (51%), Gaps = 2/384 (0%)
 Frame = -3

Query: 1536 TMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNM 1357
            T   +L   + +G +   + IH    K GF S  T  NSL+  Y K G++  A  +F  +
Sbjct: 201  TFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDEL 260

Query: 1356 EERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGK 1177
             +R VVSW SMI+G    G S  A++ F  M    +  D  T+ + + ACA  GSL  G+
Sbjct: 261  GDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGR 320

Query: 1176 EVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNC 997
             +H    +      +  +N L+DMY+KCG++ DA   F +M  K + SW ++I  Y +  
Sbjct: 321  ALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREG 380

Query: 996  LPNEALDSFINMQSH-IRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVAN 820
            L ++A+  F  M+S  + PD  ++T +L        LD+GR++H YI ++  +    V+N
Sbjct: 381  LYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSN 440

Query: 819  ALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIP 640
            ALMDMY KCG+M  A L+F +I  KDIVSW  MI GY      +EA+  F +M++    P
Sbjct: 441  ALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RP 499

Query: 639  DEVSFTSILYACSHSGLLDEGWRFYN-IMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            D ++   +L AC     L+ G   +  I+RN Y+   +L     ++D+  + G L  A  
Sbjct: 500  DGITMACLLPACGSLAALEIGRGIHGCILRNGYS--SELHVANALIDMYVKCGSLVHARL 557

Query: 462  FIKRMPVQPDATIWGALLCGCRIY 391
                +P + D   W  ++ GC ++
Sbjct: 558  LFDMIP-EKDLITWTVMISGCGMH 580



 Score =  177 bits (449), Expect = 1e-41
 Identities = 118/400 (29%), Positives = 195/400 (48%), Gaps = 2/400 (0%)
 Frame = -3

Query: 1524 VLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKN-MEER 1348
            +L  C+    L   + +H      G   +      L+  Y  CG +     IF + + + 
Sbjct: 103  ILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDN 162

Query: 1347 SVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKEVH 1168
             V  W  M++ YA+ G   E+I +F+ M+K GI  +++T + IL   A  G +   K +H
Sbjct: 163  KVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIH 222

Query: 1167 DYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCLPN 988
              V +   GS   V N+L+  Y K G ++ A  +F ++  +D+ SWN+MI G   N   +
Sbjct: 223  GCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSH 282

Query: 987  EALDSFINMQ-SHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALM 811
             AL+ F+ M    +  D  T+   +        L  GR +HG  +++ FS +    N L+
Sbjct: 283  SALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLL 342

Query: 810  DMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPDEV 631
            DMY KCG +  A   F+K+  K +VSWT +IA Y   G   +AI  F +M+  G+ PD  
Sbjct: 343  DMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVY 402

Query: 630  SFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYKFIKR 451
            S TS+L+AC+    LD+G   +N +R   N+   L     ++D+ A+ G + EAY    +
Sbjct: 403  SMTSVLHACACGNSLDKGRDVHNYIRKN-NMALCLPVSNALMDMYAKCGSMEEAYLVFSQ 461

Query: 450  MPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPEN 331
            +PV+ D   W  ++ G   Y +  L  +      E++ E+
Sbjct: 462  IPVK-DIVSWNTMIGG---YSKNSLPNEALKLFAEMQKES 497



 Score =  110 bits (274), Expect = 2e-21
 Identities = 79/307 (25%), Positives = 144/307 (46%), Gaps = 2/307 (0%)
 Frame = -3

Query: 1323 IAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKEVHDYVKERNM 1144
            I  +   G    A+++ R  +K  ++ +A++  SIL  CA    L+ GK VH  +    +
Sbjct: 71   ICKFCEVGDLRNAVELLRMSQKSELDLNAYS--SILQLCAEHKCLQEGKMVHSVISSNGI 128

Query: 1143 GSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKD-IFSWNTMIGGYSKNCLPNEALDSFI 967
                 +   L+ MY  CG++ + + +F  + + + +F WN M+  Y+K     E++  F 
Sbjct: 129  PIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFK 188

Query: 966  NMQS-HIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALMDMYVKCG 790
             MQ   I  +  T +CIL        +   + IHG + +  F S   V N+L+  Y K G
Sbjct: 189  KMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSG 248

Query: 789  AMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILY 610
             +  A  +FD++  +D+VSW  MI+G  M GF   A+  F  M    +  D  +  + + 
Sbjct: 249  EVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVA 308

Query: 609  ACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYKFIKRMPVQPDA 430
            AC++ G L  G R  +    +     ++     ++D+ ++ G L +A +  ++M  Q   
Sbjct: 309  ACANVGSLSLG-RALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMG-QKTV 366

Query: 429  TIWGALL 409
              W +L+
Sbjct: 367  VSWTSLI 373


>ref|XP_006414062.1| hypothetical protein EUTSA_v10024377mg [Eutrema salsugineum]
            gi|557115232|gb|ESQ55515.1| hypothetical protein
            EUTSA_v10024377mg [Eutrema salsugineum]
          Length = 872

 Score =  680 bits (1754), Expect = 0.0
 Identities = 318/515 (61%), Positives = 415/515 (80%), Gaps = 2/515 (0%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            LAT+V V A+C+    L L R +H   +KA    +  F N+LLD Y+KCGD+  ++ +F 
Sbjct: 297  LATIVSVFASCADSRLLSLGRAVHSLGLKACLGRQERFCNTLLDMYAKCGDLDSSIAVFT 356

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
             M +RSVVS+TSMIAGYAR+GL+ EA+++F +M ++GI  D +TVT++L+ CA +  LE 
Sbjct: 357  EMSDRSVVSYTSMIAGYAREGLAGEAVKLFTEMEEKGISPDVYTVTAVLNCCARNRLLEE 416

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
            GK VH+++KE +MG  +F+SNALMDMYAKCGSM++A+ VFS+M  KDI SWNT+IGGYSK
Sbjct: 417  GKRVHEWIKENDMGFDIFLSNALMDMYAKCGSMQEAELVFSEMPVKDIISWNTIIGGYSK 476

Query: 1002 NCLPNEALDSF--INMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRF 829
            NC  NEAL  F  +  +  +  D+ TV C+LP        D+GREIHGYI+R+ + SDR 
Sbjct: 477  NCYANEALSLFNLLLEEKQLNADERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH 536

Query: 828  VANALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAG 649
            VAN+L+DMY KCGA+L+A+L+FD++ASKD+VSWT+MIAGYGM+G G+E+IA F  M++AG
Sbjct: 537  VANSLVDMYAKCGALLLARLLFDEVASKDLVSWTVMIAGYGMHGIGAESIALFNRMREAG 596

Query: 648  IIPDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEA 469
            I PDE+SF S+LYACSHSGL+DEGWRF+NIMR+E  I P LEHYAC+VD+LAR G L++A
Sbjct: 597  IEPDEISFVSVLYACSHSGLVDEGWRFFNIMRHECKIEPTLEHYACIVDMLARTGNLSKA 656

Query: 468  YKFIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEA 289
            Y+FI+ MP+ PDATIWGALLCGCRI+H+VKLAEKVA+ +F LEP+NTGYY+L+ANIYAEA
Sbjct: 657  YRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFALEPDNTGYYVLMANIYAEA 716

Query: 288  EKWEEVKKMREKIGMRGLKKNPGCSWIEIKGKVYIFVSGDNGLPEARKIQLFLKRLRKRM 109
            EKWEEVK++R++IG RGL+KNPGCSWIEIKGKV IFV+GD+  PE  KI+ FL+R+R RM
Sbjct: 717  EKWEEVKRLRKRIGRRGLRKNPGCSWIEIKGKVNIFVAGDSSHPETEKIEAFLRRVRARM 776

Query: 108  KEEGHSPNLTYALINADDREKEISLCGHSEKLAMA 4
            +EEG+SP   YALI+A++ EKE +LCGHSEKLAMA
Sbjct: 777  REEGYSPQTKYALIDAEEMEKEEALCGHSEKLAMA 811



 Score =  206 bits (524), Expect = 2e-50
 Identities = 121/362 (33%), Positives = 193/362 (53%), Gaps = 4/362 (1%)
 Frame = -3

Query: 1476 IHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNMEERSVVSWTSMIAGYARQGL 1297
            +H + +K+GF    +  NSL+  Y K   +  A  +F  M ER V+SW SMI GY   GL
Sbjct: 218  LHGFILKSGFGDCNSVANSLVAFYLKNQRVESARKVFDEMTERDVISWNSMINGYVSNGL 277

Query: 1296 SDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKEVHDYVKERNMGSSLFVSNA 1117
            +++ + +F  M   G++ D  T+ S+  +CA S  L  G+ VH    +  +G      N 
Sbjct: 278  AEQGLSLFVQMLSSGMDIDLATIVSVFASCADSRLLSLGRAVHSLGLKACLGRQERFCNT 337

Query: 1116 LMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCLPNEALDSFINMQSH-IRPD 940
            L+DMYAKCG ++ +  VF++M+ + + S+ +MI GY++  L  EA+  F  M+   I PD
Sbjct: 338  LLDMYAKCGDLDSSIAVFTEMSDRSVVSYTSMIAGYAREGLAGEAVKLFTEMEEKGISPD 397

Query: 939  DVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALMDMYVKCGAMLMAQLIFD 760
              TVT +L        L+ G+ +H +I  ++   D F++NALMDMY KCG+M  A+L+F 
Sbjct: 398  VYTVTAVLNCCARNRLLEEGKRVHEWIKENDMGFDIFLSNALMDMYAKCGSMQEAELVFS 457

Query: 759  KIASKDIVSWTIMIAGYGMYGFGSEAIATFK-DMKQAGIIPDEVSFTSILYACSHSGLLD 583
            ++  KDI+SW  +I GY    + +EA++ F   +++  +  DE +   +L AC+     D
Sbjct: 458  EMPVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKQLNADERTVACVLPACASLSAFD 517

Query: 582  EGWRFYN-IMRNEYNIVPKLEHYA-CMVDLLARAGKLTEAYKFIKRMPVQPDATIWGALL 409
            +G   +  IMRN Y       H A  +VD+ A+ G L  A      +    D   W  ++
Sbjct: 518  KGREIHGYIMRNGYF---SDRHVANSLVDMYAKCGALLLARLLFDEV-ASKDLVSWTVMI 573

Query: 408  CG 403
             G
Sbjct: 574  AG 575



 Score =  184 bits (466), Expect = 1e-43
 Identities = 109/380 (28%), Positives = 189/380 (49%), Gaps = 2/380 (0%)
 Frame = -3

Query: 1536 TMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNM 1357
            T+  VL  C+   +L   + +  +    GF       + L   Y+ CGD+  A  +F ++
Sbjct: 97   TLCSVLQLCADSRSLKYGKEVDSFIRGNGFVIDSNLGSKLALMYTNCGDLKEAGRVFDHV 156

Query: 1356 EERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGK 1177
                 + W  ++   A+ G    +I +F+ M   G+E D++T + I  + +   S+  G+
Sbjct: 157  RIEKALFWNILMNELAKSGDFSGSIGLFKKMLSSGVEMDSYTFSCISKSFSSLRSVNGGE 216

Query: 1176 EVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNC 997
            ++H ++ +   G    V+N+L+  Y K   +E A+ VF +MT +D+ SWN+MI GY  N 
Sbjct: 217  QLHGFILKSGFGDCNSVANSLVAFYLKNQRVESARKVFDEMTERDVISWNSMINGYVSNG 276

Query: 996  LPNEALDSFINM-QSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVAN 820
            L  + L  F+ M  S +  D  T+  +         L  GR +H   L++         N
Sbjct: 277  LAEQGLSLFVQMLSSGMDIDLATIVSVFASCADSRLLSLGRAVHSLGLKACLGRQERFCN 336

Query: 819  ALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIP 640
             L+DMY KCG +  +  +F +++ + +VS+T MIAGY   G   EA+  F +M++ GI P
Sbjct: 337  TLLDMYAKCGDLDSSIAVFTEMSDRSVVSYTSMIAGYAREGLAGEAVKLFTEMEEKGISP 396

Query: 639  DEVSFTSILYACSHSGLLDEGWRFYN-IMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            D  + T++L  C+ + LL+EG R +  I  N+      L +   ++D+ A+ G + EA  
Sbjct: 397  DVYTVTAVLNCCARNRLLEEGKRVHEWIKENDMGFDIFLSN--ALMDMYAKCGSMQEAEL 454

Query: 462  FIKRMPVQPDATIWGALLCG 403
                MPV+ D   W  ++ G
Sbjct: 455  VFSEMPVK-DIISWNTIIGG 473



 Score =  121 bits (304), Expect = 7e-25
 Identities = 104/424 (24%), Positives = 185/424 (43%), Gaps = 38/424 (8%)
 Frame = -3

Query: 1353 ERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKE 1174
            +RS+    + +  +   G  + A+++     K  I  D  T+ S+L  CA S SL+ GKE
Sbjct: 59   DRSLTDANTRLRRFCEAGNLESAVKLLSVSGKWDI--DPRTLCSVLQLCADSRSLKYGKE 116

Query: 1173 VHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCL 994
            V  +++         + + L  MY  CG +++A  VF  +  +    WN ++   +K+  
Sbjct: 117  VDSFIRGNGFVIDSNLGSKLALMYTNCGDLKEAGRVFDHVRIEKALFWNILMNELAKSGD 176

Query: 993  PNEALDSFINM-QSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANA 817
             + ++  F  M  S +  D  T +CI         ++ G ++HG+IL+S F     VAN+
Sbjct: 177  FSGSIGLFKKMLSSGVEMDSYTFSCISKSFSSLRSVNGGEQLHGFILKSGFGDCNSVANS 236

Query: 816  LMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIPD 637
            L+  Y+K   +  A+ +FD++  +D++SW  MI GY   G   + ++ F  M  +G+  D
Sbjct: 237  LVAFYLKNQRVESARKVFDEMTERDVISWNSMINGYVSNGLAEQGLSLFVQMLSSGMDID 296

Query: 636  EVSFTSILYACSHSGLLDEG---------------WRFYNIMRNEYNIVPKLE------- 523
              +  S+  +C+ S LL  G                RF N + + Y     L+       
Sbjct: 297  LATIVSVFASCADSRLLSLGRAVHSLGLKACLGRQERFCNTLLDMYAKCGDLDSSIAVFT 356

Query: 522  --------HYACMVDLLARAGKLTEAYKFIKRMP---VQPDATIWGALLCGCRIYHEVKL 376
                     Y  M+   AR G   EA K    M    + PD     A+L  C     ++ 
Sbjct: 357  EMSDRSVVSYTSMIAGYAREGLAGEAVKLFTEMEEKGISPDVYTVTAVLNCCARNRLLEE 416

Query: 375  AEKVADHIFELEPENTGYYILLAN----IYAEAEKWEEVKKMREKIGMRGLKKNPGCSWI 208
             ++V + I E    + G+ I L+N    +YA+    +E + +  ++ ++ +      SW 
Sbjct: 417  GKRVHEWIKE---NDMGFDIFLSNALMDMYAKCGSMQEAELVFSEMPVKDI-----ISWN 468

Query: 207  EIKG 196
             I G
Sbjct: 469  TIIG 472


>ref|XP_004504288.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like isoform X1 [Cicer arietinum]
            gi|502140652|ref|XP_004504289.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like isoform X2 [Cicer arietinum]
          Length = 879

 Score =  678 bits (1750), Expect = 0.0
 Identities = 319/514 (62%), Positives = 412/514 (80%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            L T+V VL AC+ IGNL L R +H + +KA F  ++ F+N+LLD YSKCG+++GA  +F 
Sbjct: 306  LTTLVSVLVACANIGNLSLGRALHAFGVKAPFSGEVVFSNTLLDMYSKCGNLNGATEVFV 365

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
             M E ++VSWTS+IA Y R+GL D+AI +F +M+ +G+  D +TVTSI+HACACS SL+ 
Sbjct: 366  KMGETTIVSWTSIIAAYVREGLYDDAIGLFDEMQSKGVRPDIYTVTSIVHACACSNSLDK 425

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
            G++VH YV + +M S+L V+NALM+MYAKCGSME+A+ VFSQ+ AKDI SWNTMIGGYSK
Sbjct: 426  GRDVHSYVIKNSMVSNLPVANALMNMYAKCGSMEEARLVFSQIPAKDIVSWNTMIGGYSK 485

Query: 1002 NCLPNEALDSFINMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVA 823
            N LPN AL+ F +M   ++PDD+T+ C+LP       LD+GREIHG+ILR  + SD  VA
Sbjct: 486  NSLPNGALELFSDMVEQLKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVA 545

Query: 822  NALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGII 643
             AL+DMY KCG +++AQ++FD I  KD++SWT+MIAGYGM+GFG+EAI+TF  M+ AGI 
Sbjct: 546  CALVDMYAKCGLLVLAQILFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNKMRIAGIE 605

Query: 642  PDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            PDE SFT+IL ACSHSGLL+EGWRF+N MRNE +I PKLEHYACMVDLL RAG L++AYK
Sbjct: 606  PDESSFTAILNACSHSGLLNEGWRFFNSMRNECSIEPKLEHYACMVDLLGRAGNLSKAYK 665

Query: 462  FIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEAEK 283
            FI+ MP++P+ATIWGALL GCRI+H+VKLAEKVADH+FELEP+NT YY++LAN+YAEAEK
Sbjct: 666  FIESMPIKPNATIWGALLSGCRIHHDVKLAEKVADHVFELEPDNTRYYVVLANVYAEAEK 725

Query: 282  WEEVKKMREKIGMRGLKKNPGCSWIEIKGKVYIFVSGDNGLPEARKIQLFLKRLRKRMKE 103
            WEE KK+RE++  RG K+NPGCSWIE++GK  IFV+G+   P+A++I   L++L+ +MK 
Sbjct: 726  WEEAKKLRERMQRRGFKQNPGCSWIEVRGKFNIFVAGNTKHPQAKRIDTLLRKLKMQMKN 785

Query: 102  EGHSPNLTYALINADDREKEISLCGHSEKLAMAF 1
               S  L YALINAD+ EKE+  CGHSEKLAMAF
Sbjct: 786  GDFSTKLKYALINADEMEKEVIQCGHSEKLAMAF 819



 Score =  229 bits (583), Expect = 3e-57
 Identities = 136/381 (35%), Positives = 206/381 (54%), Gaps = 3/381 (0%)
 Frame = -3

Query: 1536 TMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNM 1357
            T   VL   + +G +   + +H Y +K GF S     NSL+ AY K G +  A  +F  +
Sbjct: 207  TFTCVLKCFTALGKVKECKRVHGYVLKLGFGSSTAVVNSLIAAYFKFGGVESAHNLFDEL 266

Query: 1356 EERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGK 1177
             +R VVSW SMI G    G S   +++F  M   G+  D  T+ S+L ACA  G+L  G+
Sbjct: 267  SDRDVVSWNSMINGCVVNGFSRNGLEIFIQMLILGVGVDLTTLVSVLVACANIGNLSLGR 326

Query: 1176 EVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNC 997
             +H +  +      +  SN L+DMY+KCG++  A  VF +M    I SW ++I  Y +  
Sbjct: 327  ALHAFGVKAPFSGEVVFSNTLLDMYSKCGNLNGATEVFVKMGETTIVSWTSIIAAYVREG 386

Query: 996  LPNEALDSFINMQSH-IRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVAN 820
            L ++A+  F  MQS  +RPD  TVT I+        LD+GR++H Y++++   S+  VAN
Sbjct: 387  LYDDAIGLFDEMQSKGVRPDIYTVTSIVHACACSNSLDKGRDVHSYVIKNSMVSNLPVAN 446

Query: 819  ALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIP 640
            ALM+MY KCG+M  A+L+F +I +KDIVSW  MI GY      + A+  F DM +  + P
Sbjct: 447  ALMNMYAKCGSMEEARLVFSQIPAKDIVSWNTMIGGYSKNSLPNGALELFSDMVEQ-LKP 505

Query: 639  DEVSFTSILYACSHSGLLDEGWRFY-NIMRNEYNIVPKLEHYAC-MVDLLARAGKLTEAY 466
            D+++   +L AC+    LD+G   + +I+R  Y       H AC +VD+ A+ G L  A 
Sbjct: 506  DDITMACVLPACAGLAALDKGREIHGHILRRGYF---SDLHVACALVDMYAKCGLLVLAQ 562

Query: 465  KFIKRMPVQPDATIWGALLCG 403
                 +P + D   W  ++ G
Sbjct: 563  ILFDMIP-KKDLISWTVMIAG 582



 Score =  188 bits (478), Expect = 5e-45
 Identities = 125/410 (30%), Positives = 205/410 (50%), Gaps = 6/410 (1%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            L T   VL  C+   +L   + IH   +  G   K      L+  Y  CGD+     IF 
Sbjct: 104  LNTYCSVLQLCAERKSLEDGKRIHFIIVSKGIPIKGALGAKLVFMYVNCGDLVKGREIFD 163

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
             +    V  W  M++ YA+ G   E++ +F  M+K GI  D++T T +L      G ++ 
Sbjct: 164  EILNDKVFLWNLMMSEYAKIGNYRESLGLFNKMQKLGIAGDSYTFTCVLKCFTALGKVKE 223

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
             K VH YV +   GSS  V N+L+  Y K G +E A  +F +++ +D+ SWN+MI G   
Sbjct: 224  CKRVHGYVLKLGFGSSTAVVNSLIAAYFKFGGVESAHNLFDELSDRDVVSWNSMINGCVV 283

Query: 1002 NCLPNEALDSFINMQ-SHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFV 826
            N      L+ FI M    +  D  T+  +L        L  GR +H + +++ FS +   
Sbjct: 284  NGFSRNGLEIFIQMLILGVGVDLTTLVSVLVACANIGNLSLGRALHAFGVKAPFSGEVVF 343

Query: 825  ANALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGI 646
            +N L+DMY KCG +  A  +F K+    IVSWT +IA Y   G   +AI  F +M+  G+
Sbjct: 344  SNTLLDMYSKCGNLNGATEVFVKMGETTIVSWTSIIAAYVREGLYDDAIGLFDEMQSKGV 403

Query: 645  IPDEVSFTSILYACSHSGLLDEGWRFYN-IMRNEYNIVPKLEHYACMVDLLARAGKLTEA 469
             PD  + TSI++AC+ S  LD+G   ++ +++N  ++V  L     ++++ A+ G + EA
Sbjct: 404  RPDIYTVTSIVHACACSNSLDKGRDVHSYVIKN--SMVSNLPVANALMNMYAKCGSMEEA 461

Query: 468  YKFIKRMPVQPDATIWGALLCGCRIYHEVKL----AEKVADHIFELEPEN 331
                 ++P + D   W  ++ G   Y +  L     E  +D + +L+P++
Sbjct: 462  RLVFSQIPAK-DIVSWNTMIGG---YSKNSLPNGALELFSDMVEQLKPDD 507


>ref|XP_006282442.1| hypothetical protein CARUB_v10004110mg [Capsella rubella]
            gi|482551147|gb|EOA15340.1| hypothetical protein
            CARUB_v10004110mg [Capsella rubella]
          Length = 872

 Score =  676 bits (1743), Expect = 0.0
 Identities = 319/515 (61%), Positives = 411/515 (79%), Gaps = 2/515 (0%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            LAT+V V AAC+    + L R +H + +KA F  +  F N+LLD YSKCGD+  A  +F 
Sbjct: 297  LATIVSVFAACADSRLISLGRAVHGFGMKACFSREDRFCNTLLDMYSKCGDLDSAKAVFT 356

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
             M +RSVVS+TSMIAGYAR+GL+ EA+++F +M K GI  D +TVT++L+ CA +  L+ 
Sbjct: 357  EMSDRSVVSYTSMIAGYAREGLAGEAVKLFGEMEKEGISPDVYTVTAVLNCCARNRLLDE 416

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
            GK VH+++KE +MG  +FVSNALMDMYAKCGSM++A+ VFS+M  +DI SWNT+IGGYSK
Sbjct: 417  GKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVRDIISWNTVIGGYSK 476

Query: 1002 NCLPNEALDSF--INMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRF 829
            NC  NEAL  F  +  +    PD+ TV C+LP        D+GREIHGYI+R+ + SDR 
Sbjct: 477  NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH 536

Query: 828  VANALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAG 649
            VAN+L+DMY KCGA+L+A+++FD IASKD+VSWT+MIAGYGM+GFG EAIA F  M++AG
Sbjct: 537  VANSLVDMYAKCGALLLARMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMREAG 596

Query: 648  IIPDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEA 469
            I  DE+SF S+LYACSHSGL+DEGWR +NIMR+E  I P +EHYAC+VD+LAR G L++A
Sbjct: 597  IEADEISFVSLLYACSHSGLVDEGWRIFNIMRHECKIEPTVEHYACIVDMLARTGNLSKA 656

Query: 468  YKFIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEA 289
            Y+FI+ MP+ PDATIWGALLCGCRI+H+VKLAE+VA+ +FELEPENTGYY+L+ANIYAEA
Sbjct: 657  YRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEA 716

Query: 288  EKWEEVKKMREKIGMRGLKKNPGCSWIEIKGKVYIFVSGDNGLPEARKIQLFLKRLRKRM 109
            +KWE+VKK+R++IG RGL+KNPGCSWIEIKGKV IFV+GD+  PE  +I+ FL+ +R RM
Sbjct: 717  DKWEQVKKLRKRIGQRGLRKNPGCSWIEIKGKVNIFVAGDSSNPETEQIEAFLRSVRARM 776

Query: 108  KEEGHSPNLTYALINADDREKEISLCGHSEKLAMA 4
            +EEG SP   YALI+A++ EKE +LCGHSEKLAMA
Sbjct: 777  REEGISPLTKYALIDAEEMEKEEALCGHSEKLAMA 811



 Score =  189 bits (479), Expect = 4e-45
 Identities = 109/380 (28%), Positives = 195/380 (51%), Gaps = 2/380 (0%)
 Frame = -3

Query: 1536 TMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNM 1357
            T+  VL  C+   +L   + +  +  + GF    +  + L   Y+ CGD+  A  +F  +
Sbjct: 97   TLCSVLQLCADSKSLKGGKEVDSFIRRNGFVIDSSLGSKLALMYTNCGDLKEASRVFDQV 156

Query: 1356 EERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGK 1177
            +    + W  ++   A+ G    +I +F+ M   G+E D++T + I  + +   S+  G+
Sbjct: 157  KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSLGVEMDSYTFSCISKSFSSLRSVNGGE 216

Query: 1176 EVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNC 997
            ++H Y+ +   G    V N+L+  Y K   ++ A+ VF +MT +D+ SWN++I GY  N 
Sbjct: 217  QLHGYILKSGFGDRNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 276

Query: 996  LPNEALDSFINM-QSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVAN 820
            L  + L  F+ M  S +  D  T+  +         +  GR +HG+ +++ FS +    N
Sbjct: 277  LAEQGLSVFVQMLVSGVEIDLATIVSVFAACADSRLISLGRAVHGFGMKACFSREDRFCN 336

Query: 819  ALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAGIIP 640
             L+DMY KCG +  A+ +F +++ + +VS+T MIAGY   G   EA+  F +M++ GI P
Sbjct: 337  TLLDMYSKCGDLDSAKAVFTEMSDRSVVSYTSMIAGYAREGLAGEAVKLFGEMEKEGISP 396

Query: 639  DEVSFTSILYACSHSGLLDEGWRFYN-IMRNEYNIVPKLEHYACMVDLLARAGKLTEAYK 463
            D  + T++L  C+ + LLDEG R +  I  N+      + +   ++D+ A+ G + EA  
Sbjct: 397  DVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSN--ALMDMYAKCGSMQEAEL 454

Query: 462  FIKRMPVQPDATIWGALLCG 403
                M V+ D   W  ++ G
Sbjct: 455  VFSEMRVR-DIISWNTVIGG 473



 Score =  133 bits (334), Expect = 2e-28
 Identities = 109/439 (24%), Positives = 192/439 (43%), Gaps = 38/439 (8%)
 Frame = -3

Query: 1437 ITFNNSLLDAYSKCGDMHGAVCIFKNMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRK 1258
            + FN + L   S C D   ++  F    +RS     + +  Y   G  + A+++ R   K
Sbjct: 38   VIFNRASLRTVSDCSD---SISTF----DRSATDANTRLRRYCESGNLESAVKLLRVSGK 90

Query: 1257 RGIEADAFTVTSILHACACSGSLENGKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMED 1078
              I  D  T+ S+L  CA S SL+ GKEV  +++         + + L  MY  CG +++
Sbjct: 91   WDI--DPRTLCSVLQLCADSKSLKGGKEVDSFIRRNGFVIDSSLGSKLALMYTNCGDLKE 148

Query: 1077 AKTVFSQMTAKDIFSWNTMIGGYSKNCLPNEALDSFINMQS-HIRPDDVTVTCILPXXXX 901
            A  VF Q+  +    WN ++   +K+   + ++  F  M S  +  D  T +CI      
Sbjct: 149  ASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSLGVEMDSYTFSCISKSFSS 208

Query: 900  XXXLDRGREIHGYILRSEFSSDRFVANALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIM 721
               ++ G ++HGYIL+S F     V N+L+  Y+K   +  A+ +FD++  +D++SW  +
Sbjct: 209  LRSVNGGEQLHGYILKSGFGDRNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSI 268

Query: 720  IAGYGMYGFGSEAIATFKDMKQAGIIPDEVSFTSILYACSHSGLLDEGW----------- 574
            I GY   G   + ++ F  M  +G+  D  +  S+  AC+ S L+  G            
Sbjct: 269  INGYVSNGLAEQGLSVFVQMLVSGVEIDLATIVSVFAACADSRLISLGRAVHGFGMKACF 328

Query: 573  ----RFYNIMRNEYNIVPKLE---------------HYACMVDLLARAGKLTEAYKFIKR 451
                RF N + + Y+    L+                Y  M+   AR G   EA K    
Sbjct: 329  SREDRFCNTLLDMYSKCGDLDSAKAVFTEMSDRSVVSYTSMIAGYAREGLAGEAVKLFGE 388

Query: 450  MP---VQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLAN----IYAE 292
            M    + PD     A+L  C     +   ++V + I E    + G+ I ++N    +YA+
Sbjct: 389  MEKEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKE---NDMGFDIFVSNALMDMYAK 445

Query: 291  AEKWEEVKKMREKIGMRGL 235
                +E + +  ++ +R +
Sbjct: 446  CGSMQEAELVFSEMRVRDI 464


>dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  676 bits (1743), Expect = 0.0
 Identities = 319/515 (61%), Positives = 408/515 (79%), Gaps = 2/515 (0%)
 Frame = -3

Query: 1542 LATMVIVLAACSWIGNLMLIRNIHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFK 1363
            LAT+V V A C+    + L R +H   +KA F  +  F N+LLD YSKCGD+  A  +F+
Sbjct: 145  LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 204

Query: 1362 NMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLEN 1183
             M +RSVVS+TSMIAGYAR+GL+ EA+++F +M + GI  D +TVT++L+ CA    L+ 
Sbjct: 205  EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 264

Query: 1182 GKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSK 1003
            GK VH+++KE ++G  +FVSNALMDMYAKCGSM++A+ VFS+M  KDI SWNT+IGGYSK
Sbjct: 265  GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 324

Query: 1002 NCLPNEALDSF--INMQSHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRF 829
            NC  NEAL  F  +  +    PD+ TV C+LP        D+GREIHGYI+R+ + SDR 
Sbjct: 325  NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH 384

Query: 828  VANALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQAG 649
            VAN+L+DMY KCGA+L+A ++FD IASKD+VSWT+MIAGYGM+GFG EAIA F  M+QAG
Sbjct: 385  VANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG 444

Query: 648  IIPDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTEA 469
            I  DE+SF S+LYACSHSGL+DEGWRF+NIMR+E  I P +EHYAC+VD+LAR G L +A
Sbjct: 445  IEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKA 504

Query: 468  YKFIKRMPVQPDATIWGALLCGCRIYHEVKLAEKVADHIFELEPENTGYYILLANIYAEA 289
            Y+FI+ MP+ PDATIWGALLCGCRI+H+VKLAEKVA+ +FELEPENTGYY+L+ANIYAEA
Sbjct: 505  YRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEA 564

Query: 288  EKWEEVKKMREKIGMRGLKKNPGCSWIEIKGKVYIFVSGDNGLPEARKIQLFLKRLRKRM 109
            EKWE+VK++R++IG RGL+KNPGCSWIEIKG+V IFV+GD+  PE   I+ FL+++R RM
Sbjct: 565  EKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM 624

Query: 108  KEEGHSPNLTYALINADDREKEISLCGHSEKLAMA 4
             EEG+SP   YALI+A++ EKE +LCGHSEKLAMA
Sbjct: 625  IEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMA 659



 Score =  211 bits (538), Expect = 5e-52
 Identities = 124/362 (34%), Positives = 192/362 (53%), Gaps = 4/362 (1%)
 Frame = -3

Query: 1476 IHVYAIKAGFDSKITFNNSLLDAYSKCGDMHGAVCIFKNMEERSVVSWTSMIAGYARQGL 1297
            +H + +K+GF  + +  NSL+  Y K   +  A  +F  M ER V+SW S+I GY   GL
Sbjct: 66   LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGL 125

Query: 1296 SDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSLENGKEVHDYVKERNMGSSLFVSNA 1117
            +++ + +F  M   GIE D  T+ S+   CA S  +  G+ VH    +          N 
Sbjct: 126  AEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT 185

Query: 1116 LMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGYSKNCLPNEALDSFINMQSH-IRPD 940
            L+DMY+KCG ++ AK VF +M+ + + S+ +MI GY++  L  EA+  F  M+   I PD
Sbjct: 186  LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 245

Query: 939  DVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDRFVANALMDMYVKCGAMLMAQLIFD 760
              TVT +L        LD G+ +H +I  ++   D FV+NALMDMY KCG+M  A+L+F 
Sbjct: 246  VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS 305

Query: 759  KIASKDIVSWTIMIAGYGMYGFGSEAIATFK-DMKQAGIIPDEVSFTSILYACSHSGLLD 583
            ++  KDI+SW  +I GY    + +EA++ F   +++    PDE +   +L AC+     D
Sbjct: 306  EMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFD 365

Query: 582  EGWRFYN-IMRNEYNIVPKLEHYA-CMVDLLARAGKLTEAYKFIKRMPVQPDATIWGALL 409
            +G   +  IMRN Y       H A  +VD+ A+ G L  A+     +    D   W  ++
Sbjct: 366  KGREIHGYIMRNGYF---SDRHVANSLVDMYAKCGALLLAHMLFDDI-ASKDLVSWTVMI 421

Query: 408  CG 403
             G
Sbjct: 422  AG 423



 Score =  167 bits (422), Expect = 1e-38
 Identities = 93/323 (28%), Positives = 169/323 (52%), Gaps = 1/323 (0%)
 Frame = -3

Query: 1368 FKNMEERSVVSWTSMIAGYARQGLSDEAIQMFRDMRKRGIEADAFTVTSILHACACSGSL 1189
            F  ++    + W  ++   A+ G    +I +F+ M   G+E D++T + +  + +   S+
Sbjct: 1    FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 1188 ENGKEVHDYVKERNMGSSLFVSNALMDMYAKCGSMEDAKTVFSQMTAKDIFSWNTMIGGY 1009
              G+++H ++ +   G    V N+L+  Y K   ++ A+ VF +MT +D+ SWN++I GY
Sbjct: 61   HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120

Query: 1008 SKNCLPNEALDSFINMQ-SHIRPDDVTVTCILPXXXXXXXLDRGREIHGYILRSEFSSDR 832
              N L  + L  F+ M  S I  D  T+  +         +  GR +H   +++ FS + 
Sbjct: 121  VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180

Query: 831  FVANALMDMYVKCGAMLMAQLIFDKIASKDIVSWTIMIAGYGMYGFGSEAIATFKDMKQA 652
               N L+DMY KCG +  A+ +F +++ + +VS+T MIAGY   G   EA+  F++M++ 
Sbjct: 181  RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240

Query: 651  GIIPDEVSFTSILYACSHSGLLDEGWRFYNIMRNEYNIVPKLEHYACMVDLLARAGKLTE 472
            GI PD  + T++L  C+   LLDEG R +  ++ E ++   +     ++D+ A+ G + E
Sbjct: 241  GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK-ENDLGFDIFVSNALMDMYAKCGSMQE 299

Query: 471  AYKFIKRMPVQPDATIWGALLCG 403
            A      M V+ D   W  ++ G
Sbjct: 300  AELVFSEMRVK-DIISWNTIIGG 321