BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00020891
         (2069 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain...   181   2e-54
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]...   181   2e-54
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]            181   2e-54
ref|XP_002307276.1| hypothetical protein POPTR_0005s18370g [Popu...   163   1e-47
ref|XP_002318395.1| predicted protein [Populus trichocarpa]           156   6e-46
ref|XP_006378933.1| hypothetical protein POPTR_0009s00900g [Popu...   156   6e-46
ref|XP_002337129.1| predicted protein [Populus trichocarpa]           156   6e-46
ref|XP_006398032.1| hypothetical protein EUTSA_v10001266mg [Eutr...   153   9e-42
gb|EOY20720.1| Uncharacterized protein TCM_012065 [Theobroma cacao]   153   1e-40
ref|XP_002317407.1| hypothetical protein POPTR_0011s07150g [Popu...   135   1e-38
ref|XP_002300439.1| predicted protein [Populus trichocarpa]           167   1e-38
ref|XP_006408742.1| hypothetical protein EUTSA_v10002187mg, part...   142   4e-38
ref|XP_002893824.1| hypothetical protein ARALYDRAFT_891051 [Arab...   135   2e-37
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru...   131   6e-36
ref|XP_006409623.1| hypothetical protein EUTSA_v10022984mg, part...   135   8e-36
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]         129   2e-35
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]         129   2e-35
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part...   126   2e-34
ref|XP_006408745.1| hypothetical protein EUTSA_v10002304mg, part...   147   2e-32
ref|XP_002891104.1| hypothetical protein ARALYDRAFT_336508 [Arab...   121   5e-32

>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
            protein; Short=MP; Contains: RecName: Full=Capsid
            protein; Short=CP; Contains: RecName: Full=Aspartic
            protease; Short=PR; Contains: RecName: Full=Reverse
            transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
            polyprotein 1 [Petunia vein clearing virus]
          Length = 2180

 Score =  181 bits (459), Expect(2) = 2e-54
 Identities = 96/192 (50%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
 Frame = +2

Query: 629  NMDLTTARSSSVSLYTSPFHQTVSKKLDYLYEVTIDQSSHFQPEKY-PFMNPYTNYAKSI 805
            N  L T  S++  L      + +S K DYLYEV I + +    + Y P +NPY+ +AK  
Sbjct: 11   NSSLATTYSNAPKL-----SKALSNKYDYLYEVDILKENQKISDTYLPLLNPYSAFAKRS 65

Query: 806  ISPWKTIKSLIRHTPSSVREI---SKMD*HPITTIGKEQFVTF*IPEDFPR*WKERGYSH 976
            ++PW  I+SL++  P  V+E    SK+D HP+   G+EQFVT  IPE+F   WK   ++H
Sbjct: 66   VTPWSQIRSLVQSKPRHVKEYVAASKLDQHPVFATGEEQFVTLHIPEEFASHWKSHQFTH 125

Query: 977  IHFGTVRIAVTLHGRKDLPMVARVALLDTRFLAYQYACIATVETTLNAGTVFITLYPNFN 1156
            IHFG V+IA+T HGRK  P+VAR+ALLDTR+L YQ+A + T E TLNAGTVFITL+PNF 
Sbjct: 126  IHFGAVKIALTYHGRKGQPVVARLALLDTRYLEYQHANLGTAEITLNAGTVFITLFPNFT 185

Query: 1157 MFLSDQHLLNAL 1192
            M LSD +L  AL
Sbjct: 186  MSLSDANLSTAL 197



 Score = 60.8 bits (146), Expect(2) = 2e-54
 Identities = 29/56 (51%), Positives = 42/56 (75%)
 Frame = +3

Query: 1173 NISSMLFKVQVQINGAAQISDAHQGTLHYQMIY*VQKHAIDLSLPGGEKTLLIRVN 1340
            N+S+ L K+QVQI GA    D+ Q TLHYQ+ + VQ HA+DL+LPGGE+ L ++++
Sbjct: 192  NLSTAL-KIQVQIQGAPLTKDSIQATLHYQIAWRVQNHAMDLTLPGGEEALFLKID 246


>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
            gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
            polyprotein; Contains: RecName: Full=Movement protein;
            Short=MP; Contains: RecName: Full=Capsid protein;
            Short=CP; Contains: RecName: Full=Aspartic protease;
            Short=PR; Contains: RecName: Full=Reverse transcriptase;
            Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
            [petunia vein clearing virus]
          Length = 2179

 Score =  181 bits (459), Expect(2) = 2e-54
 Identities = 96/192 (50%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
 Frame = +2

Query: 629  NMDLTTARSSSVSLYTSPFHQTVSKKLDYLYEVTIDQSSHFQPEKY-PFMNPYTNYAKSI 805
            N  L T  S++  L      + +S K DYLYEV I + +    + Y P +NPY+ +AK  
Sbjct: 10   NSSLATTYSNAPKL-----SKALSNKYDYLYEVDILKENQKISDTYLPLLNPYSAFAKRS 64

Query: 806  ISPWKTIKSLIRHTPSSVREI---SKMD*HPITTIGKEQFVTF*IPEDFPR*WKERGYSH 976
            ++PW  I+SL++  P  V+E    SK+D HP+   G+EQFVT  IPE+F   WK   ++H
Sbjct: 65   VTPWSQIRSLVQSKPRHVKEYVAASKLDQHPVFATGEEQFVTLHIPEEFASHWKSHQFTH 124

Query: 977  IHFGTVRIAVTLHGRKDLPMVARVALLDTRFLAYQYACIATVETTLNAGTVFITLYPNFN 1156
            IHFG V+IA+T HGRK  P+VAR+ALLDTR+L YQ+A + T E TLNAGTVFITL+PNF 
Sbjct: 125  IHFGAVKIALTYHGRKGQPVVARLALLDTRYLEYQHANLGTAEITLNAGTVFITLFPNFT 184

Query: 1157 MFLSDQHLLNAL 1192
            M LSD +L  AL
Sbjct: 185  MSLSDANLSTAL 196



 Score = 60.8 bits (146), Expect(2) = 2e-54
 Identities = 29/56 (51%), Positives = 42/56 (75%)
 Frame = +3

Query: 1173 NISSMLFKVQVQINGAAQISDAHQGTLHYQMIY*VQKHAIDLSLPGGEKTLLIRVN 1340
            N+S+ L K+QVQI GA    D+ Q TLHYQ+ + VQ HA+DL+LPGGE+ L ++++
Sbjct: 191  NLSTAL-KIQVQIQGAPLTKDSIQATLHYQIAWRVQNHAMDLTLPGGEEALFLKID 245


>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
          Length = 1886

 Score =  181 bits (459), Expect(2) = 2e-54
 Identities = 96/192 (50%), Positives = 127/192 (66%), Gaps = 4/192 (2%)
 Frame = +2

Query: 629  NMDLTTARSSSVSLYTSPFHQTVSKKLDYLYEVTIDQSSHFQPEKY-PFMNPYTNYAKSI 805
            N  L T  S++  L      + +S K DYLYEV I + +    + Y P +NPY+ +AK  
Sbjct: 11   NSSLATTYSNAPKL-----SKALSNKYDYLYEVDILKENQKISDTYLPLLNPYSAFAKRS 65

Query: 806  ISPWKTIKSLIRHTPSSVREI---SKMD*HPITTIGKEQFVTF*IPEDFPR*WKERGYSH 976
            ++PW  I+SL++  P  V+E    SK+D HP+   G+EQFVT  IPE+F   WK   ++H
Sbjct: 66   VTPWSQIRSLVQSKPRHVKEYVAASKLDQHPVFATGEEQFVTLHIPEEFASHWKSHQFTH 125

Query: 977  IHFGTVRIAVTLHGRKDLPMVARVALLDTRFLAYQYACIATVETTLNAGTVFITLYPNFN 1156
            IHFG V+IA+T HGRK  P+VAR+ALLDTR+L YQ+A + T E TLNAGTVFITL+PNF 
Sbjct: 126  IHFGAVKIALTYHGRKGQPVVARLALLDTRYLEYQHANLGTAEITLNAGTVFITLFPNFT 185

Query: 1157 MFLSDQHLLNAL 1192
            M LSD +L  AL
Sbjct: 186  MSLSDANLSTAL 197



 Score = 60.8 bits (146), Expect(2) = 2e-54
 Identities = 29/56 (51%), Positives = 42/56 (75%)
 Frame = +3

Query: 1173 NISSMLFKVQVQINGAAQISDAHQGTLHYQMIY*VQKHAIDLSLPGGEKTLLIRVN 1340
            N+S+ L K+QVQI GA    D+ Q TLHYQ+ + VQ HA+DL+LPGGE+ L ++++
Sbjct: 192  NLSTAL-KIQVQIQGAPLTKDSIQATLHYQIAWRVQNHAMDLTLPGGEEALFLKID 246


>ref|XP_002307276.1| hypothetical protein POPTR_0005s18370g [Populus trichocarpa]
            gi|222856725|gb|EEE94272.1| hypothetical protein
            POPTR_0005s18370g [Populus trichocarpa]
          Length = 667

 Score =  163 bits (412), Expect(2) = 1e-47
 Identities = 88/198 (44%), Positives = 123/198 (62%), Gaps = 12/198 (6%)
 Frame = +2

Query: 623  LLNMDLTTARSSSVSLYTSPFH--------QTVSKKLDYLYEVTI-DQSSHFQPEKYPFM 775
            + +  L++  SSS+   +S FH        Q+ S KLDYLYEV++ + + +      P +
Sbjct: 1    MTSSSLSSPPSSSLLTSSSSFHLPPSPSIRQSTSTKLDYLYEVSLLNDTQNISETDLPLV 60

Query: 776  NPYTNYAKSIISPWKTIKSLIRHTPSSVREI---SKMD*HPITTIGKEQFVTF*IPEDFP 946
            NPY  +AK   S  ++IK+LI+      +E    S  D H I    +EQFVT  IP +F 
Sbjct: 61   NPYHAFAKRSPSVIRSIKTLIKQPSRVAKEYVQASSFDQHKIPATSREQFVTLEIPSEFL 120

Query: 947  R*WKERGYSHIHFGTVRIAVTLHGRKDLPMVARVALLDTRFLAYQYACIATVETTLNAGT 1126
              W  +GY+HIHFG +R+A++ HG+K LP+ AR+ALLDTR+L YQ+ACI ++ETTLN GT
Sbjct: 121  GQWISQGYTHIHFGAIRLALSYHGQKGLPVAARLALLDTRYLEYQHACIGSLETTLNCGT 180

Query: 1127 VFITLYPNFNMFLSDQHL 1180
            V +T YPNFNM L D  L
Sbjct: 181  VVVTFYPNFNMALDDPQL 198



 Score = 56.2 bits (134), Expect(2) = 1e-47
 Identities = 29/49 (59%), Positives = 33/49 (67%)
 Frame = +3

Query: 1194 KVQVQINGAAQISDAHQGTLHYQMIY*VQKHAIDLSLPGGEKTLLIRVN 1340
            KVQ+QI GA Q+ D +Q TLHYQM Y VQ HA DL LP     LLI V+
Sbjct: 203  KVQLQIIGADQVLDTYQATLHYQMAYRVQNHAFDLVLPVTNDALLITVD 251


>ref|XP_002318395.1| predicted protein [Populus trichocarpa]
          Length = 1497

 Score =  156 bits (394), Expect(2) = 6e-46
 Identities = 88/192 (45%), Positives = 115/192 (59%), Gaps = 12/192 (6%)
 Frame = +2

Query: 653  SSSVSLYTSP-FHQTVSKKLDYLYEVTI-DQSSHFQPEKYPFMNPYTNYAKSIISPWKTI 826
            SSS  L  SP   Q+ S KLDY YEV++ D +        P +NPY  + K   S  ++I
Sbjct: 18   SSSFHLPPSPSIRQSTSTKLDYFYEVSLLDDTQKISETDLPLVNPYHAFTKKSPSVIRSI 77

Query: 827  KSLIRHTPSSVREI---SKMD*HPITTIGKEQFVTF*IPEDFPR*WKERGYSHIHFGTVR 997
            K+LI+      +E    S  D H I    +EQFVT  IP +FP  W  +GY+HIHF  +R
Sbjct: 78   KTLIKQPSRVAKEYVQASSFDQHKIPATSREQFVTLEIPTEFPGQWISQGYTHIHFCAIR 137

Query: 998  IAVTLHGRKDLPMVARVA-------LLDTRFLAYQYACIATVETTLNAGTVFITLYPNFN 1156
            +A++ HGRK LP+ AR+A       LLDTR+L YQ+ACI +++TTLN GTV +T YPNFN
Sbjct: 138  LALSYHGRKGLPVAARLALLDTRYPLLDTRYLEYQHACIGSLQTTLNCGTVVVTFYPNFN 197

Query: 1157 MFLSDQHLLNAL 1192
            M L D  L N L
Sbjct: 198  MALDDPQLHNFL 209



 Score = 57.4 bits (137), Expect(2) = 6e-46
 Identities = 29/49 (59%), Positives = 33/49 (67%)
 Frame = +3

Query: 1194 KVQVQINGAAQISDAHQGTLHYQMIY*VQKHAIDLSLPGGEKTLLIRVN 1340
            KVQ+QI GA Q+ D +Q TLHYQM Y VQ HA DL LP     LLI V+
Sbjct: 210  KVQLQITGADQVLDTYQATLHYQMAYRVQNHAFDLVLPVTNDALLITVD 258


>ref|XP_006378933.1| hypothetical protein POPTR_0009s00900g [Populus trichocarpa]
            gi|550330770|gb|ERP56730.1| hypothetical protein
            POPTR_0009s00900g [Populus trichocarpa]
          Length = 335

 Score =  156 bits (395), Expect(2) = 6e-46
 Identities = 88/192 (45%), Positives = 115/192 (59%), Gaps = 12/192 (6%)
 Frame = +2

Query: 653  SSSVSLYTSP-FHQTVSKKLDYLYEVTI-DQSSHFQPEKYPFMNPYTNYAKSIISPWKTI 826
            SSS  L  SP   Q+ S KLDYLYEV++ D +        P +NPY  + K   S  ++I
Sbjct: 18   SSSFHLPPSPSIRQSTSTKLDYLYEVSLLDDTQKISETDLPLVNPYHTFTKKSPSVIRSI 77

Query: 827  KSLIRHTPSSVREI---SKMD*HPITTIGKEQFVTF*IPEDFPR*WKERGYSHIHFGTVR 997
            K+LI+      +E    S  D H I    +E FVT  IP +FP  W  +GY+HIHF  +R
Sbjct: 78   KTLIKQPSRVAKEYVQASSFDQHKIPATSREHFVTLEIPTEFPGQWISQGYTHIHFCAIR 137

Query: 998  IAVTLHGRKDLPMVARVA-------LLDTRFLAYQYACIATVETTLNAGTVFITLYPNFN 1156
            +A++ HGRK LP+ AR+A       LLDTR+L YQ+ACI +++TTLN GTV +T YPNFN
Sbjct: 138  LALSYHGRKGLPVAARLALLDTRYPLLDTRYLEYQHACIGSLQTTLNCGTVVVTFYPNFN 197

Query: 1157 MFLSDQHLLNAL 1192
            M L D  L N L
Sbjct: 198  MALDDPQLHNFL 209



 Score = 57.0 bits (136), Expect(2) = 6e-46
 Identities = 29/49 (59%), Positives = 33/49 (67%)
 Frame = +3

Query: 1194 KVQVQINGAAQISDAHQGTLHYQMIY*VQKHAIDLSLPGGEKTLLIRVN 1340
            KVQ+QI GA Q+ D +Q TLHYQM Y VQ HA DL LP     LLI V+
Sbjct: 210  KVQLQITGADQVLDTYQATLHYQMAYRVQNHAFDLVLPITNDALLITVD 258


>ref|XP_002337129.1| predicted protein [Populus trichocarpa]
          Length = 284

 Score =  156 bits (395), Expect(2) = 6e-46
 Identities = 88/192 (45%), Positives = 115/192 (59%), Gaps = 12/192 (6%)
 Frame = +2

Query: 653  SSSVSLYTSP-FHQTVSKKLDYLYEVTI-DQSSHFQPEKYPFMNPYTNYAKSIISPWKTI 826
            SSS  L  SP   Q+ S KLDYLYEV++ D +        P +NPY  + K   S  ++I
Sbjct: 18   SSSFHLPPSPSIRQSTSTKLDYLYEVSLLDDTQKISETDLPLVNPYHTFTKKSPSVIRSI 77

Query: 827  KSLIRHTPSSVREI---SKMD*HPITTIGKEQFVTF*IPEDFPR*WKERGYSHIHFGTVR 997
            K+LI+      +E    S  D H I    +E FVT  IP +FP  W  +GY+HIHF  +R
Sbjct: 78   KTLIKQPSRVAKEYVQASSFDQHKIPATSREHFVTLEIPTEFPGQWISQGYTHIHFCAIR 137

Query: 998  IAVTLHGRKDLPMVARVA-------LLDTRFLAYQYACIATVETTLNAGTVFITLYPNFN 1156
            +A++ HGRK LP+ AR+A       LLDTR+L YQ+ACI +++TTLN GTV +T YPNFN
Sbjct: 138  LALSYHGRKGLPVAARLALLDTRYPLLDTRYLEYQHACIGSLQTTLNCGTVVVTFYPNFN 197

Query: 1157 MFLSDQHLLNAL 1192
            M L D  L N L
Sbjct: 198  MALDDPQLHNFL 209



 Score = 57.0 bits (136), Expect(2) = 6e-46
 Identities = 29/49 (59%), Positives = 33/49 (67%)
 Frame = +3

Query: 1194 KVQVQINGAAQISDAHQGTLHYQMIY*VQKHAIDLSLPGGEKTLLIRVN 1340
            KVQ+QI GA Q+ D +Q TLHYQM Y VQ HA DL LP     LLI V+
Sbjct: 210  KVQLQITGADQVLDTYQATLHYQMAYRVQNHAFDLVLPITNDALLITVD 258


>ref|XP_006398032.1| hypothetical protein EUTSA_v10001266mg [Eutrema salsugineum]
            gi|557099114|gb|ESQ39485.1| hypothetical protein
            EUTSA_v10001266mg [Eutrema salsugineum]
          Length = 492

 Score =  153 bits (386), Expect(2) = 9e-42
 Identities = 78/176 (44%), Positives = 113/176 (64%), Gaps = 4/176 (2%)
 Frame = +2

Query: 665  SLYTSPFHQTVSKKLDYLYEVT-IDQSSHFQPEKYPFMNPYTNYAKSIISPWKTIKSLIR 841
            SL T+ F ++ S K+DYLYE+  + + S     + P +NP   + K   +  K IK +  
Sbjct: 4    SLNTTHFRKSTSSKIDYLYEIEYVSEDSKVPITQLPLLNPDKVFTKPKSTFPKVIKQVFG 63

Query: 842  HTPSSVREI---SKMD*HPITTIGKEQFVTF*IPEDFPR*WKERGYSHIHFGTVRIAVTL 1012
             +  + RE+   S+M+ H +     +Q +     E     WK  GY+H+H+G +R+A+TL
Sbjct: 64   PSKHAARELILASQMEQHLVPATETKQMIPLRFNEGMVHQWKTHGYTHLHYGAIRLALTL 123

Query: 1013 HGRKDLPMVARVALLDTRFLAYQYACIATVETTLNAGTVFITLYPNFNMFLSDQHL 1180
            HGRKDLP+VARVALLDTR+  YQ+ACIAT++TTL+AGTVF+TLYPNFN+ L D  +
Sbjct: 124  HGRKDLPVVARVALLDTRYREYQHACIATIQTTLDAGTVFVTLYPNFNISLEDPQI 179



 Score = 46.6 bits (109), Expect(2) = 9e-42
 Identities = 19/37 (51%), Positives = 29/37 (78%)
 Frame = +3

Query: 1194 KVQVQINGAAQISDAHQGTLHYQMIY*VQKHAIDLSL 1304
            ++Q+QI GA Q+ + +  TLH+QM+Y VQ H++DLSL
Sbjct: 184  QIQLQITGAPQVGNTYVATLHHQMVYRVQNHSMDLSL 220


>gb|EOY20720.1| Uncharacterized protein TCM_012065 [Theobroma cacao]
          Length = 280

 Score =  153 bits (387), Expect(2) = 1e-40
 Identities = 80/167 (47%), Positives = 111/167 (66%), Gaps = 4/167 (2%)
 Frame = +2

Query: 704  KLDYLYEVT-IDQSSHFQPEKYPFMNPYTNYAKSIISPWKTIKSLIRHTPSSVREI---S 871
            K+D+L EV  I +    QP +    NPY+ YAK   SP K+IK+LI+H+P + +E    +
Sbjct: 28   KIDFLREVDYIPEEGKTQPLQLSLTNPYSVYAKPTFSPVKSIKTLIKHSPKAPKEYIQST 87

Query: 872  KMD*HPITTIGKEQFVTF*IPEDFPR*WKERGYSHIHFGTVRIAVTLHGRKDLPMVARVA 1051
            + D H I     EQFVT  IP +FP+ W   GYSHIHFG VR+A+  HGR+   +VA +A
Sbjct: 88   RFDEHFIQGDQAEQFVTLQIPLEFPQQWIHHGYSHIHFGAVRLALNYHGREGQSVVAHMA 147

Query: 1052 LLDTRFLAYQYACIATVETTLNAGTVFITLYPNFNMFLSDQHLLNAL 1192
            LLD+R++ Y++ACI TVE TLN  T+ +TL+PN+ M L D +LL+AL
Sbjct: 148  LLDSRYIKYEHACIGTVEDTLNTKTLIVTLFPNYTMALCDPNLLSAL 194



 Score = 42.4 bits (98), Expect(2) = 1e-40
 Identities = 26/43 (60%), Positives = 29/43 (67%)
 Frame = +3

Query: 1173 NISSMLFKVQVQINGAAQISDAHQGTLHYQMIY*VQKHAIDLS 1301
            N+ S L KVQVQI  A QI  A   TLHYQM+Y VQ HA +LS
Sbjct: 189  NLLSAL-KVQVQIIRAPQIPFAIIATLHYQMVYKVQDHAFNLS 230


>ref|XP_002317407.1| hypothetical protein POPTR_0011s07150g [Populus trichocarpa]
            gi|222860472|gb|EEE98019.1| hypothetical protein
            POPTR_0011s07150g [Populus trichocarpa]
          Length = 950

 Score =  135 bits (341), Expect(2) = 1e-38
 Identities = 69/143 (48%), Positives = 93/143 (65%), Gaps = 3/143 (2%)
 Frame = +2

Query: 773  MNPYTNYAKSIISPWKTIKSLIRHTPSSVREI---SKMD*HPITTIGKEQFVTF*IPEDF 943
            +NPY  + K   S   +IK+LI+      +E    S  D H I    KEQFVT  IP +F
Sbjct: 11   VNPYHAFTKKSPSVICSIKTLIKQPSRVAKEYVQASSFDQHKIPATSKEQFVTLEIPTEF 70

Query: 944  PR*WKERGYSHIHFGTVRIAVTLHGRKDLPMVARVALLDTRFLAYQYACIATVETTLNAG 1123
            P  W  +GY+HI+FG +R+A++ HGRK LP+ A++ALLDTR+L YQ+ACI +++TTL+ G
Sbjct: 71   PGQWISQGYTHIYFGAIRLALSYHGRKGLPVAAQLALLDTRYLEYQHACIGSLKTTLDCG 130

Query: 1124 TVFITLYPNFNMFLSDQHLLNAL 1192
             V +T YPNFNM L D  L N L
Sbjct: 131  MVVVTFYPNFNMALDDPQLHNFL 153



 Score = 53.5 bits (127), Expect(2) = 1e-38
 Identities = 25/38 (65%), Positives = 28/38 (73%)
 Frame = +3

Query: 1194 KVQVQINGAAQISDAHQGTLHYQMIY*VQKHAIDLSLP 1307
            KVQ+QI GA Q+ D +Q TLHYQM Y VQ HA DL LP
Sbjct: 154  KVQLQITGADQVLDTYQATLHYQMAYRVQNHAFDLVLP 191


>ref|XP_002300439.1| predicted protein [Populus trichocarpa]
          Length = 212

 Score =  167 bits (424), Expect = 1e-38
 Identities = 89/183 (48%), Positives = 115/183 (62%), Gaps = 7/183 (3%)
 Frame = +2

Query: 653  SSSVSLYTSP---FHQTVSKKLDYLYEVTI-DQSSHFQPEKYPFMNPYTNYAKSIISPWK 820
            +SS S Y  P     Q+ S KLDYLYEV++ D +          +NPY  +AK   S  +
Sbjct: 24   TSSSSFYLPPSPSIRQSTSTKLDYLYEVSLLDDTQKISETDLSLVNPYHAFAKKSPSVIR 83

Query: 821  TIKSLIRHTPSSVREI---SKMD*HPITTIGKEQFVTF*IPEDFPR*WKERGYSHIHFGT 991
             IK+LI+      +E    S  D H I  I +EQFVT  IP +FP  W  +GY+HIHFG 
Sbjct: 84   NIKTLIKQPSRVAKEYVQASSFDQHKIPAISREQFVTLAIPSEFPGQWISQGYTHIHFGA 143

Query: 992  VRIAVTLHGRKDLPMVARVALLDTRFLAYQYACIATVETTLNAGTVFITLYPNFNMFLSD 1171
            +R+A++ HGRK LP+ AR+ALLDTR+L YQ+ACI ++ETTLN GTV +T YPNFNM L D
Sbjct: 144  IRLALSYHGRKGLPVAARLALLDTRYLEYQHACIGSLETTLNCGTVVVTFYPNFNMALDD 203

Query: 1172 QHL 1180
              L
Sbjct: 204  PQL 206


>ref|XP_006408742.1| hypothetical protein EUTSA_v10002187mg, partial [Eutrema salsugineum]
            gi|557109898|gb|ESQ50195.1| hypothetical protein
            EUTSA_v10002187mg, partial [Eutrema salsugineum]
          Length = 341

 Score =  142 bits (357), Expect(2) = 4e-38
 Identities = 71/170 (41%), Positives = 104/170 (61%), Gaps = 4/170 (2%)
 Frame = +2

Query: 683  FHQTVSKKLDYLYEVT-IDQSSHFQPEKYPFMNPYTNYAKSIISPWKTIKSLIRHTPSSV 859
            F ++ S K+DYLYE+  + + S     +   +NPY  + K   +  K IK +      + 
Sbjct: 7    FQKSTSSKIDYLYEIEYVSEESKVPITQLLLLNPYKAFTKPNSTLPKVIKQVFGPRKHAA 66

Query: 860  REI---SKMD*HPITTIGKEQFVTF*IPEDFPR*WKERGYSHIHFGTVRIAVTLHGRKDL 1030
            RE+   S+M+ H +   G EQ +     E     WK  GY+H+H+  +R+A+TLHGRK L
Sbjct: 67   RELIPASQMEQHLVPATGTEQMIPLRFNEGMVHQWKNHGYTHLHYRAIRLALTLHGRKGL 126

Query: 1031 PMVARVALLDTRFLAYQYACIATVETTLNAGTVFITLYPNFNMFLSDQHL 1180
            P+VARVA+LDTR+  YQ ACI+T++T LNAGT+F+TLYPNF + L D  +
Sbjct: 127  PVVARVAILDTRYKEYQRACISTIQTILNAGTIFVTLYPNFKIALKDPQI 176



 Score = 45.4 bits (106), Expect(2) = 4e-38
 Identities = 19/38 (50%), Positives = 28/38 (73%)
 Frame = +3

Query: 1194 KVQVQINGAAQISDAHQGTLHYQMIY*VQKHAIDLSLP 1307
            ++Q+QI GA Q+ + +  T H+QM Y VQ HA+DLS+P
Sbjct: 181  QIQLQITGAPQVGNTYVATPHHQMAYRVQNHAMDLSIP 218


>ref|XP_002893824.1| hypothetical protein ARALYDRAFT_891051 [Arabidopsis lyrata subsp.
            lyrata] gi|297339666|gb|EFH70083.1| hypothetical protein
            ARALYDRAFT_891051 [Arabidopsis lyrata subsp. lyrata]
          Length = 291

 Score =  135 bits (341), Expect(2) = 2e-37
 Identities = 72/180 (40%), Positives = 110/180 (61%), Gaps = 4/180 (2%)
 Frame = +2

Query: 653  SSSVSLYTSPFHQTVSKKLDYLYEVT-IDQSSHFQPEKYPFMNPYTNYAKSIISPWKTIK 829
            SSS  + +S F ++ + K+D LYEV  +   S     +   +NPY  + KS  +  K IK
Sbjct: 3    SSSSLIKSSSFRKSNASKIDNLYEVEYVSDESKVPITQLSLLNPYKAFTKSNSTFPKVIK 62

Query: 830  SLIRHTPSSVREI---SKMD*HPITTIGKEQFVTF*IPEDFPR*WKERGYSHIHFGTVRI 1000
             +      + RE+   S+++ H + T   EQ +   + E     W+  GY+H+H+G +R+
Sbjct: 63   YVFGPHKHAARELVLASQLEQHLVPTTETEQMIPLRLNEGMIHQWRAYGYTHLHYGAIRV 122

Query: 1001 AVTLHGRKDLPMVARVALLDTRFLAYQYACIATVETTLNAGTVFITLYPNFNMFLSDQHL 1180
            A+TL+GRK LP+V RVALLDTR+  YQ+  IAT++TTLNA T+F+TL+PNFN+ L D  +
Sbjct: 123  ALTLYGRKGLPIVVRVALLDTRYREYQHTYIATIQTTLNASTIFVTLFPNFNVVLEDPQI 182



 Score = 49.7 bits (117), Expect(2) = 2e-37
 Identities = 24/49 (48%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
 Frame = +3

Query: 1194 KVQVQINGAAQISDAHQGTLHYQMIY*VQKHAIDLSLPGG-EKTLLIRV 1337
            ++Q+QI GA Q+ + +  TLH+QM Y VQ H++DLSLP   E  LLI++
Sbjct: 187  QIQLQITGAPQVRNTYAATLHHQMAYRVQNHSMDLSLPSDTEDALLIQL 235


>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
            gi|565672276|gb|AHC13194.1| polyprotein [Citrus
            endogenous pararetrovirus]
          Length = 1812

 Score =  131 bits (329), Expect(2) = 6e-36
 Identities = 75/190 (39%), Positives = 106/190 (55%), Gaps = 2/190 (1%)
 Frame = +2

Query: 629  NMDLTTARSSSVSLYTSPFHQTVSKKLDYLYEVTIDQSSHFQPEKYPFMNPYTNYAK--S 802
            N+      SS++SL  S    T +K  + +    I +S+      YP ++PY  Y +  S
Sbjct: 8    NLSTPLTLSSTLSLPKSCTSHTANKIENLVEYSYIPESAQISESTYPLISPYHLYKRPNS 67

Query: 803  IISPWKTIKSLIRHTPSSVREISKMD*HPITTIGKEQFVTF*IPEDFPR*WKERGYSHIH 982
                 +T+ S  R  P    + S++D   +     EQ+VT  IP +    WK  GY+H+H
Sbjct: 68   FTRSIRTLISTKRPHPKEYIQSSRLDQCALKATSAEQYVTLEIPSELISNWKREGYTHLH 127

Query: 983  FGTVRIAVTLHGRKDLPMVARVALLDTRFLAYQYACIATVETTLNAGTVFITLYPNFNMF 1162
             G +R+ +TLHGRK LP+ ARVALLDTRF  +Q A I TV TTL+AG+V +T YPNFN+ 
Sbjct: 128  LGGIRLILTLHGRKGLPVTARVALLDTRFKQFQDAVIGTVLTTLHAGSVLLTFYPNFNLS 187

Query: 1163 LSDQHLLNAL 1192
            L D +L   L
Sbjct: 188  LQDPNLPTTL 197



 Score = 48.9 bits (115), Expect(2) = 6e-36
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = +3

Query: 1194 KVQVQINGAAQISDAHQGTLHYQMIY*VQKHAIDLSLP 1307
            KVQVQI GA QIS A   TLH+Q++Y +Q HA+DL  P
Sbjct: 198  KVQVQIQGAEQISTAKIATLHHQLVYRLQNHALDLPTP 235


>ref|XP_006409623.1| hypothetical protein EUTSA_v10022984mg, partial [Eutrema salsugineum]
            gi|557110785|gb|ESQ51076.1| hypothetical protein
            EUTSA_v10022984mg, partial [Eutrema salsugineum]
          Length = 397

 Score =  135 bits (340), Expect(2) = 8e-36
 Identities = 72/176 (40%), Positives = 104/176 (59%), Gaps = 4/176 (2%)
 Frame = +2

Query: 665  SLYTSPFHQTVSKKLDYLYEVT-IDQSSHFQPEKYPFMNPYTNYAKSIISPWKTIKSLIR 841
            SL T+PF ++ S K+DYLYE+  + + S     + P +NPY  + K   S  K IK +  
Sbjct: 4    SLNTTPFRKSTSSKIDYLYEIEYVSEDSKVPITQLPLLNPYKAFTKPNSSFPKVIKQVFG 63

Query: 842  HTPSSVREI---SKMD*HPITTIGKEQFVTF*IPEDFPR*WKERGYSHIHFGTVRIAVTL 1012
             +  + RE+   S+M+ H +     E+ +     E     WK  GY+H+H+G +R+A+TL
Sbjct: 64   PSKHAARELILASQMEQHLVPATETEKMIPLRFNEGMVHQWKTHGYTHLHYGAIRLALTL 123

Query: 1013 HGRKDLPMVARVALLDTRFLAYQYACIATVETTLNAGTVFITLYPNFNMFLSDQHL 1180
            HGRK LP+VAR            +ACIAT++TTLNAGTVF+TLYPNFN+ L D  +
Sbjct: 124  HGRKGLPVVAR------------HACIATIQTTLNAGTVFVTLYPNFNISLEDPQI 167



 Score = 44.3 bits (103), Expect(2) = 8e-36
 Identities = 18/36 (50%), Positives = 28/36 (77%)
 Frame = +3

Query: 1194 KVQVQINGAAQISDAHQGTLHYQMIY*VQKHAIDLS 1301
            ++Q+QI GA+Q+ + +  TLH+QM Y VQ HA+DL+
Sbjct: 172  QIQLQITGASQVGNTYVATLHHQMAYRVQNHAMDLT 207


>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1799

 Score =  129 bits (325), Expect(2) = 2e-35
 Identities = 74/190 (38%), Positives = 105/190 (55%), Gaps = 2/190 (1%)
 Frame = +2

Query: 629  NMDLTTARSSSVSLYTSPFHQTVSKKLDYLYEVTIDQSSHFQPEKYPFMNPYTNYAK--S 802
            N+      SS++SL  S    T +K  + +    I +S+      YP ++PY  Y +  S
Sbjct: 8    NLSTPLTLSSTLSLPKSCTSHTANKIENLVEYSYIPESAQISESTYPLISPYHLYKRPNS 67

Query: 803  IISPWKTIKSLIRHTPSSVREISKMD*HPITTIGKEQFVTF*IPEDFPR*WKERGYSHIH 982
                 +T+ S  R  P    + S++D   +     EQ+VT  IP +    WK  GY+H+H
Sbjct: 68   FTRSIRTLISTKRPHPKEYIQSSRLDQCALKATSAEQYVTLEIPSELISNWKREGYTHLH 127

Query: 983  FGTVRIAVTLHGRKDLPMVARVALLDTRFLAYQYACIATVETTLNAGTVFITLYPNFNMF 1162
             G +R+ +TLHGRK LP+ ARVALLDTRF  +Q A I TV TTL+ G+V +T YPNFN+ 
Sbjct: 128  LGGIRLILTLHGRKGLPVTARVALLDTRFKQFQDAVIGTVLTTLHVGSVLLTFYPNFNLS 187

Query: 1163 LSDQHLLNAL 1192
            L D +L   L
Sbjct: 188  LQDPNLPTTL 197



 Score = 48.9 bits (115), Expect(2) = 2e-35
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = +3

Query: 1194 KVQVQINGAAQISDAHQGTLHYQMIY*VQKHAIDLSLP 1307
            KVQVQI GA QIS A   TLH+Q++Y +Q HA+DL  P
Sbjct: 198  KVQVQIQGAEQISTAKIATLHHQLVYRLQNHALDLPTP 235


>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1701

 Score =  129 bits (323), Expect(2) = 2e-35
 Identities = 74/190 (38%), Positives = 105/190 (55%), Gaps = 2/190 (1%)
 Frame = +2

Query: 629  NMDLTTARSSSVSLYTSPFHQTVSKKLDYLYEVTIDQSSHFQPEKYPFMNPYTNYAK--S 802
            N+      SS++SL  S    T +K  + +    I +S+      YP ++PY  Y +  S
Sbjct: 8    NLSTPLTLSSTLSLPKSCTSHTANKIENLVEYSYIPESAQISESSYPLLSPYHLYKRPSS 67

Query: 803  IISPWKTIKSLIRHTPSSVREISKMD*HPITTIGKEQFVTF*IPEDFPR*WKERGYSHIH 982
                 +T+ S  R  P    + S +D   +     EQ+VT  IP +    WK  GY+H+H
Sbjct: 68   FTRSIRTLISTRRPHPKEYIQSSCLDQCSLQATPAEQYVTLEIPSELISNWKREGYTHLH 127

Query: 983  FGTVRIAVTLHGRKDLPMVARVALLDTRFLAYQYACIATVETTLNAGTVFITLYPNFNMF 1162
             G +R+ +TLHGRK LP+ AR+A+LDTRF  YQ A I TV TTL+AG+V +T YPNFN+ 
Sbjct: 128  LGGIRLILTLHGRKGLPVTARLAMLDTRFKQYQDAVIGTVLTTLHAGSVLLTFYPNFNLS 187

Query: 1163 LSDQHLLNAL 1192
            L D +L   L
Sbjct: 188  LQDPNLPTTL 197



 Score = 49.3 bits (116), Expect(2) = 2e-35
 Identities = 23/38 (60%), Positives = 27/38 (71%)
 Frame = +3

Query: 1194 KVQVQINGAAQISDAHQGTLHYQMIY*VQKHAIDLSLP 1307
            KVQVQI GA QI  A   TLHYQ++Y +Q HA+DL  P
Sbjct: 198  KVQVQIQGAEQIPSAKIATLHYQLVYRLQNHALDLPTP 235


>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
            gi|557090298|gb|ESQ31006.1| hypothetical protein
            EUTSA_v10012231mg, partial [Eutrema salsugineum]
          Length = 1904

 Score =  126 bits (316), Expect(2) = 2e-34
 Identities = 64/153 (41%), Positives = 94/153 (61%), Gaps = 3/153 (1%)
 Frame = +2

Query: 731  IDQSSHFQPEKYPFMNPYTNYAKSIISPWKTIKSLIRHTPSSVREI---SKMD*HPITTI 901
            + + S     + P +NPY  + K   +  K IK +   +  + RE+   S+M+ H +   
Sbjct: 2    VSEDSKVPITQLPLLNPYKAFTKPNSTFPKVIKQVFGPSKHAARELILASQMEQHLVPAT 61

Query: 902  GKEQFVTF*IPEDFPR*WKERGYSHIHFGTVRIAVTLHGRKDLPMVARVALLDTRFLAYQ 1081
              EQ +     E         GY+H+H+G +R+A+TLH RK LP+VARVALLDTR+  YQ
Sbjct: 62   ETEQMIPLCFNEGMTH-----GYTHLHYGAIRLALTLHARKGLPVVARVALLDTRYREYQ 116

Query: 1082 YACIATVETTLNAGTVFITLYPNFNMFLSDQHL 1180
            +ACIAT++TT+NAGT+F+TLYPNFN+ L D  +
Sbjct: 117  HACIATIQTTMNAGTIFVTLYPNFNISLEDPQI 149



 Score = 48.9 bits (115), Expect(2) = 2e-34
 Identities = 21/38 (55%), Positives = 29/38 (76%)
 Frame = +3

Query: 1194 KVQVQINGAAQISDAHQGTLHYQMIY*VQKHAIDLSLP 1307
            ++Q+QI GA Q+ + +  TLH+QM Y VQ HA+DLSLP
Sbjct: 154  QIQLQITGAPQVGNTYVATLHHQMAYRVQNHAMDLSLP 191


>ref|XP_006408745.1| hypothetical protein EUTSA_v10002304mg, partial [Eutrema salsugineum]
            gi|557109901|gb|ESQ50198.1| hypothetical protein
            EUTSA_v10002304mg, partial [Eutrema salsugineum]
          Length = 194

 Score =  147 bits (370), Expect = 2e-32
 Identities = 75/173 (43%), Positives = 109/173 (63%), Gaps = 4/173 (2%)
 Frame = +2

Query: 665  SLYTSPFHQTVSKKLDYLYEVT-IDQSSHFQPEKYPFMNPYTNYAKSIISPWKTIKSLIR 841
            SL+ +PF ++ S K+DYLYE+  + + S     + P +NPY  + K   +  K IK +  
Sbjct: 4    SLHPTPFRKSTSSKIDYLYEIEYVSEDSKVPITQLPLLNPYKAFTKPNSTLPKVIKQVFG 63

Query: 842  HTPSSVREI---SKMD*HPITTIGKEQFVTF*IPEDFPR*WKERGYSHIHFGTVRIAVTL 1012
             +  + RE+   S+M+ H +     EQ +     E     WK  GY+H+H+  +R+A++L
Sbjct: 64   PSKHAARELILASQMEQHLVPATEIEQMIPLRFNEGMVHQWKTHGYTHLHYRAIRLALSL 123

Query: 1013 HGRKDLPMVARVALLDTRFLAYQYACIATVETTLNAGTVFITLYPNFNMFLSD 1171
            HGRK L  VARVALLDTR+  YQ+AC AT++TTLNAGT+F+TLYPNFN+ L D
Sbjct: 124  HGRKSLLGVARVALLDTRYKEYQHACKATIQTTLNAGTIFVTLYPNFNIDLED 176


>ref|XP_002891104.1| hypothetical protein ARALYDRAFT_336508 [Arabidopsis lyrata subsp.
            lyrata] gi|297336946|gb|EFH67363.1| hypothetical protein
            ARALYDRAFT_336508 [Arabidopsis lyrata subsp. lyrata]
          Length = 206

 Score =  121 bits (303), Expect(2) = 5e-32
 Identities = 57/115 (49%), Positives = 80/115 (69%)
 Frame = +2

Query: 836  IRHTPSSVREISKMD*HPITTIGKEQFVTF*IPEDFPR*WKERGYSHIHFGTVRIAVTLH 1015
            IR    S  + S+++   + T   EQ +   + E     W+   Y+H+H+G +R+A+TLH
Sbjct: 12   IRSLNQSGIQASQLEQQLVLTTKTEQMIPLRLNEGMNHQWRAHDYTHLHYGAIRLALTLH 71

Query: 1016 GRKDLPMVARVALLDTRFLAYQYACIATVETTLNAGTVFITLYPNFNMFLSDQHL 1180
            GRK L +VARVALLDTR+  YQ+ACIAT++TTLNAGTVF+TL+PNFN+ L D H+
Sbjct: 72   GRKGLHVVARVALLDTRYREYQHACIATIQTTLNAGTVFVTLFPNFNVALEDPHV 126



 Score = 45.8 bits (107), Expect(2) = 5e-32
 Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = +3

Query: 1194 KVQVQINGAAQISDAHQGTLHYQMIY*VQKHAIDLSLP-GGEKTLLIRV 1337
            ++Q+QI GA QI + +  TLH+QM Y  Q +A+DLSLP   E  LLI++
Sbjct: 131  QIQLQITGAPQIGNTYAATLHHQMAYRDQNYAMDLSLPRDTEDALLIQL 179