BLASTX nr result
ID: Rauwolfia21_contig00020863
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00020863
(1179 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera] 385 e-139
gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopers... 327 e-139
emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera] 384 e-132
emb|CAN68598.1| hypothetical protein VITISV_003488 [Vitis vinifera] 380 e-130
dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis tha... 328 e-126
dbj|BAF36296.1| hypothetical protein [Ipomoea trifida] 338 e-124
gb|AAS79613.1| putative copia-like polyprotein [Ipomoea trifida] 338 e-124
gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa] 358 e-124
gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana] 329 e-124
emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera] 322 e-121
gb|AFP55573.1| retrotransposon protein [Rosa rugosa] 360 e-121
ref|XP_004288697.1| PREDICTED: uncharacterized protein LOC101308... 338 e-115
emb|CAN68953.1| hypothetical protein VITISV_016199 [Vitis vinifera] 347 e-111
emb|CAN72351.1| hypothetical protein VITISV_019853 [Vitis vinifera] 386 e-107
emb|CAN71782.1| hypothetical protein VITISV_028677 [Vitis vinifera] 284 e-107
emb|CAN76956.1| hypothetical protein VITISV_022305 [Vitis vinifera] 322 e-107
emb|CAN83411.1| hypothetical protein VITISV_037202 [Vitis vinifera] 383 e-107
emb|CAE03711.2| OSJNBa0021F22.5 [Oryza sativa Japonica Group] 325 e-106
gb|ABF96803.1| retrotransposon protein, putative, Ty1-copia subc... 313 e-105
gb|AAU89218.1| integrase core domain containing protein [Oryza s... 313 e-105
>emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]
Length = 1501
Score = 385 bits (990), Expect(2) = e-139
Identities = 183/220 (83%), Positives = 200/220 (90%)
Frame = +1
Query: 1 CGQFRYFMVLIDASTRWSHVCLLSSRNLVFARLLAQIIRLRAQFPDHPIKKIRLDNAAEY 180
CG FRYFM+LIDASTRWSHVCLLS+RN+ FARLLAQIIRLRAQFPD+PIK IRLDNA E+
Sbjct: 542 CGPFRYFMILIDASTRWSHVCLLSTRNVAFARLLAQIIRLRAQFPDYPIKTIRLDNAGEF 601
Query: 181 CSHAFDAYCMSIGITIEHPVAYVHTQNGLAESFIKRLQLIARPLLMRTNLPTSAWGHAIL 360
S F YCMS+GI IEHPVA+ HTQNGLAESFIKRLQLIARPLLM+T LPTSAWGHA +
Sbjct: 602 TSQTFIDYCMSVGINIEHPVAHTHTQNGLAESFIKRLQLIARPLLMKTKLPTSAWGHATM 661
Query: 361 HAAALVRIRPTSYHKFSPLQLASGFEPNISHLRIFGCAVYVPIAPNQRTKMGPQRRLGIY 540
HAAALVR+RPT+YH++SP QL G +PNISHLRIFGCAVYVPIAP QRTKMGPQRRLG+Y
Sbjct: 662 HAAALVRVRPTTYHEYSPSQLVLGKQPNISHLRIFGCAVYVPIAPTQRTKMGPQRRLGVY 721
Query: 541 VGYDSPSIIRYLEPLTGDVFTARFADCHFDESVFPKLGGE 660
VG+DSPSIIRYLEPLTGDVFTARFADCHF+ESVFP LG E
Sbjct: 722 VGFDSPSIIRYLEPLTGDVFTARFADCHFNESVFPSLGRE 761
Score = 137 bits (346), Expect(2) = e-139
Identities = 84/229 (36%), Positives = 126/229 (55%), Gaps = 51/229 (22%)
Frame = +2
Query: 644 PN*GENKS---KAKELDWKTS-LNYLDPRTSGSELEVQKIIHLQKIANQLPDAFANSTRV 811
P+ G KS + +E+ WKTS + +LDPRT+ ELEVQ+IIHLQ +ANQLPDAF ++ +V
Sbjct: 756 PSLGREKSIPEERREISWKTSAMTHLDPRTNQCELEVQRIIHLQNLANQLPDAFIDTKKV 815
Query: 812 TKSHLPAIDAPIRVEVPKEQDPTPVAVESKSRQKRGRPLGSKDKNPRKKKGSN------- 970
TKSH+PA + P R++VP Q + ESK R KRGRP+GSKD PRK++
Sbjct: 816 TKSHIPAANTPARIDVPVGQ----LTNESKIRLKRGRPVGSKDVTPRKRRTQEKLGTLEE 871
Query: 971 -------------------------DQSDHVEQ-------IDQEITDEKIQDSE------ 1036
+ H+EQ I+QE ++ + E
Sbjct: 872 TIKMTDQFKIDKSIALDEAQIMQKAPEEVHIEQEAPEEAHIEQETPEDPHIEREAPEEAQ 931
Query: 1037 --NNTEISINYVTSRRSWNRMEMIVDDSFAYNVALDVLQDNEDLDPTSV 1177
N EIS++YV W+R +++++ FA+ VA D+++++ED +P +V
Sbjct: 932 VPENCEISVSYVQKGEKWDRNNIVINNIFAFQVASDIIRNDEDPEPRNV 980
>gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopersicum]
Length = 779
Score = 327 bits (838), Expect(2) = e-139
Identities = 157/193 (81%), Positives = 172/193 (89%)
Frame = +1
Query: 82 LVFARLLAQIIRLRAQFPDHPIKKIRLDNAAEYCSHAFDAYCMSIGITIEHPVAYVHTQN 261
+ FARLLAQIIRL+AQFPD+ IK IRLDNA E+ S AF+ YCMS GIT+EHPVA+VHTQN
Sbjct: 1 MAFARLLAQIIRLKAQFPDYTIKTIRLDNAGEFTSQAFNDYCMSTGITVEHPVAHVHTQN 60
Query: 262 GLAESFIKRLQLIARPLLMRTNLPTSAWGHAILHAAALVRIRPTSYHKFSPLQLASGFEP 441
GLAES IKRLQLIARPLLMRT L S WGHAILHAA LVRIRPT+YH+FSPLQL G EP
Sbjct: 61 GLAESLIKRLQLIARPLLMRTKLSVSMWGHAILHAATLVRIRPTNYHEFSPLQLTFGQEP 120
Query: 442 NISHLRIFGCAVYVPIAPNQRTKMGPQRRLGIYVGYDSPSIIRYLEPLTGDVFTARFADC 621
NISHLR+FGCAVYVPIAP QRTKMGPQRRLGIYVGY+SPSII+YLEP+TGD+F RFADC
Sbjct: 121 NISHLRVFGCAVYVPIAPPQRTKMGPQRRLGIYVGYESPSIIKYLEPMTGDLFKVRFADC 180
Query: 622 HFDESVFPKLGGE 660
HFDESV+P LGGE
Sbjct: 181 HFDESVYPTLGGE 193
Score = 195 bits (496), Expect(2) = e-139
Identities = 99/183 (54%), Positives = 141/183 (77%), Gaps = 8/183 (4%)
Frame = +2
Query: 653 GENKSKAKELDWKTS-LNYLDPRTSGSELEVQKIIHLQKIANQLPDAFANSTRVTKSHLP 829
GE+KS KE+DW +S L++LDPRT+ E EVQ+II+LQ IANQLPDAF N R+TKS++P
Sbjct: 192 GEHKSLGKEIDWNSSSLSHLDPRTNQCEQEVQRIIYLQNIANQLPDAFTNLPRITKSYIP 251
Query: 830 AIDAPIRVEVPKEQDPTPVAVESKSRQKRGRPLGSKDKNPRKKKGSNDQSDH-VEQIDQE 1006
A++AP+RV++P Q A ES+ KRGRP+GSKDKNPRK+KG NDQ DH +++I Q+
Sbjct: 252 AVNAPVRVDIPTGQ--IVKANESRPHLKRGRPIGSKDKNPRKRKGINDQDDHGLKEISQD 309
Query: 1007 IT------DEKIQDSENNTEISINYVTSRRSWNRMEMIVDDSFAYNVALDVLQDNEDLDP 1168
T +E+++ S+NN EIS+NYV++R+ WNR +++D+ FAYNVA++++Q +ED +P
Sbjct: 310 ETQVITHDEEEVRTSQNN-EISMNYVSTRKFWNRNNVVIDNIFAYNVAIEIMQQDEDSEP 368
Query: 1169 TSV 1177
SV
Sbjct: 369 KSV 371
>emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]
Length = 1496
Score = 384 bits (985), Expect(2) = e-132
Identities = 183/220 (83%), Positives = 199/220 (90%)
Frame = +1
Query: 1 CGQFRYFMVLIDASTRWSHVCLLSSRNLVFARLLAQIIRLRAQFPDHPIKKIRLDNAAEY 180
CG FRYFM+LIDASTRWSHVCLLS+RN+ FARLLAQIIRLRAQFPD+PIK IRLDNA E+
Sbjct: 544 CGPFRYFMILIDASTRWSHVCLLSTRNVAFARLLAQIIRLRAQFPDYPIKTIRLDNAGEF 603
Query: 181 CSHAFDAYCMSIGITIEHPVAYVHTQNGLAESFIKRLQLIARPLLMRTNLPTSAWGHAIL 360
S F YCMS+GI IEHPVA+ HTQNGLAESFIKRLQLIARPLLM+T LPTS WGHAI+
Sbjct: 604 TSQTFIDYCMSVGINIEHPVAHTHTQNGLAESFIKRLQLIARPLLMKTKLPTSVWGHAIM 663
Query: 361 HAAALVRIRPTSYHKFSPLQLASGFEPNISHLRIFGCAVYVPIAPNQRTKMGPQRRLGIY 540
HAAALVRIRPT+YH++SP QL G +PNISHLRIFGCAVYVPIAP QRTKMGPQRRLG+Y
Sbjct: 664 HAAALVRIRPTTYHEYSPSQLVLGKQPNISHLRIFGCAVYVPIAPTQRTKMGPQRRLGVY 723
Query: 541 VGYDSPSIIRYLEPLTGDVFTARFADCHFDESVFPKLGGE 660
VG+DSPSIIRYLEPLT DVFTARFADCHF+ESVFP LG E
Sbjct: 724 VGFDSPSIIRYLEPLTDDVFTARFADCHFNESVFPSLGRE 763
Score = 116 bits (290), Expect(2) = e-132
Identities = 77/201 (38%), Positives = 110/201 (54%), Gaps = 23/201 (11%)
Frame = +2
Query: 644 PN*GENKS---KAKELDWKTS-LNYLDPRTSGSELEVQKIIHLQKIANQLPDAFANSTRV 811
P+ G KS + +E+ WKTS + +LDPRT+ ELEVQ+IIHLQ +ANQLPDAF ++ +V
Sbjct: 758 PSLGREKSIPEERREISWKTSTMTHLDPRTNQCELEVQRIIHLQNLANQLPDAFIDTKKV 817
Query: 812 TKSHLPAIDAPIRVEVPKEQDPTPVAVESKSRQKRGRPLGSKDKNPRKKKGSN------- 970
TKSH+P + P R++VP Q + ESK R KRGRP+GSKD PRK++
Sbjct: 818 TKSHIPXANTPARIDVPVGQ----LTNESKIRLKRGRPVGSKDVTPRKRRTQEKLGTLEE 873
Query: 971 ----------DQSDHVE--QIDQEITDEKIQDSENNTEISINYVTSRRSWNRMEMIVDDS 1114
D+S +E QI Q+ E + E E I T +
Sbjct: 874 AIKMTDQFKIDKSIALEEAQIMQKAPKEVHIEQEAPEEXHIEQETPEDPHIERXAPEEAQ 933
Query: 1115 FAYNVALDVLQDNEDLDPTSV 1177
N+A D+++++ED +P +V
Sbjct: 934 VPENLASDIIRNDEDPEPRNV 954
>emb|CAN68598.1| hypothetical protein VITISV_003488 [Vitis vinifera]
Length = 1146
Score = 380 bits (977), Expect(2) = e-130
Identities = 183/220 (83%), Positives = 197/220 (89%)
Frame = +1
Query: 1 CGQFRYFMVLIDASTRWSHVCLLSSRNLVFARLLAQIIRLRAQFPDHPIKKIRLDNAAEY 180
CG FRYFM+LIDASTRWSHVCLLS+RN+ FARLLAQIIRLRAQFPD+PIK IRLDNA E+
Sbjct: 211 CGPFRYFMILIDASTRWSHVCLLSTRNVAFARLLAQIIRLRAQFPDYPIKTIRLDNAGEF 270
Query: 181 CSHAFDAYCMSIGITIEHPVAYVHTQNGLAESFIKRLQLIARPLLMRTNLPTSAWGHAIL 360
S F YCMS GI IEHPVA+ HTQNGLA SFIKRLQLIARPLLM+T LPTSAWGHAI+
Sbjct: 271 TSQTFIDYCMSXGINIEHPVAHTHTQNGLAXSFIKRLQLIARPLLMKTKLPTSAWGHAIM 330
Query: 361 HAAALVRIRPTSYHKFSPLQLASGFEPNISHLRIFGCAVYVPIAPNQRTKMGPQRRLGIY 540
HAAALVRIRPT+YH++SP QL G +PNISHLRIFGCAVYVPIAP QRTKMGP RRLG Y
Sbjct: 331 HAAALVRIRPTTYHEYSPSQLVLGKQPNISHLRIFGCAVYVPIAPTQRTKMGPXRRLGXY 390
Query: 541 VGYDSPSIIRYLEPLTGDVFTARFADCHFDESVFPKLGGE 660
VG+DSPSIIRYLEPLTGDVFTARFADCHF+ESVFP LG E
Sbjct: 391 VGFDSPSIIRYLEPLTGDVFTARFADCHFNESVFPSLGXE 430
Score = 112 bits (280), Expect(2) = e-130
Identities = 75/216 (34%), Positives = 117/216 (54%), Gaps = 41/216 (18%)
Frame = +2
Query: 644 PN*GENKS---KAKELDWKTS-LNYLDPRTSGSELEVQKIIHLQKIANQLPDAFANSTRV 811
P+ G KS + +E+ WKTS + +LDPRT+ ELEVQ+IIHLQ +ANQLPDAF ++ +V
Sbjct: 425 PSLGXEKSIPEERREISWKTSTMTHLDPRTNQCELEVQRIIHLQNLANQLPDAFIDTKKV 484
Query: 812 TKSHLPAIDAPIRVEVPKEQDPTPVAVESKSRQKRGRPLGSKDKNPRKKKGSN------- 970
TKSH+PA + P R++VP Q + ESK R KRGRP +++K ++
Sbjct: 485 TKSHIPAANTPARIDVPVGQ----LTNESKIRLKRGRPRRTQEKLGTLEEAIKMTDQFKI 540
Query: 971 DQSDHVE--QIDQEITDEKIQDSENNTEISIN---------------------------- 1060
D+S +E QI Q+ +E + E +N
Sbjct: 541 DKSIALEEAQIMQKAPEEAHIEQEALKRYILNKKPPKRHILNKKPLKIXILNEKPLKRHX 600
Query: 1061 YVTSRRSWNRMEMIVDDSFAYNVALDVLQDNEDLDP 1168
YV + W+R +++++ FA+ VA D+++++ED +P
Sbjct: 601 YVQTGEKWDRNNIVINNIFAFQVASDIIRNDEDPEP 636
>dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis thaliana]
Length = 1123
Score = 328 bits (841), Expect(2) = e-126
Identities = 157/220 (71%), Positives = 180/220 (81%)
Frame = +1
Query: 1 CGQFRYFMVLIDASTRWSHVCLLSSRNLVFARLLAQIIRLRAQFPDHPIKKIRLDNAAEY 180
CG FRYFMVLIDASTRWSH IIRLRA FPD P+K IRLDNA E+
Sbjct: 224 CGTFRYFMVLIDASTRWSH-----------------IIRLRAHFPDFPLKTIRLDNAGEF 266
Query: 181 CSHAFDAYCMSIGITIEHPVAYVHTQNGLAESFIKRLQLIARPLLMRTNLPTSAWGHAIL 360
S AF+ YCMS+G+++EHPVA+VHTQNGLAESFIKR+QLIARPLLMR+ LP +AWGHA+L
Sbjct: 267 TSQAFNDYCMSMGVSVEHPVAHVHTQNGLAESFIKRIQLIARPLLMRSRLPVAAWGHAVL 326
Query: 361 HAAALVRIRPTSYHKFSPLQLASGFEPNISHLRIFGCAVYVPIAPNQRTKMGPQRRLGIY 540
HA+ L+RIRP+S HK+SP QL G EP+ISHLR FGCAVYVPIAP QRTKMGPQRR+GIY
Sbjct: 327 HASELIRIRPSSEHKYSPSQLLIGHEPDISHLRTFGCAVYVPIAPPQRTKMGPQRRMGIY 386
Query: 541 VGYDSPSIIRYLEPLTGDVFTARFADCHFDESVFPKLGGE 660
VG+DSP+II+YLEP TGD+F AR+ADCHF ES FP LGGE
Sbjct: 387 VGFDSPTIIKYLEPTTGDLFKARYADCHFSESEFPALGGE 426
Score = 151 bits (381), Expect(2) = e-126
Identities = 86/181 (47%), Positives = 118/181 (65%), Gaps = 13/181 (7%)
Frame = +2
Query: 674 KELDW-KTSLNYLDPRTSGSELEVQKIIHLQKIANQLPDAFANSTRVTKSHLPAIDAPIR 850
KE+ W +TSLN+ DPRT + EV KIIHLQK+AN+LPD+FA+S RV KS++PA +AP+R
Sbjct: 435 KEIAWNQTSLNWQDPRTLMCDSEVHKIIHLQKLANELPDSFADSKRVVKSYIPACNAPVR 494
Query: 851 VEVPKEQDPTPVAVESKSRQKRGRPLGSKDKNPRKKKGSNDQSDHVEQIDQEITDEK--- 1021
+++ K +A ES ++K GRP+GSKDKNPRK K ++ E ID K
Sbjct: 495 IDIQK--GINVIATESNPQKKHGRPVGSKDKNPRKTKKGVMGTEVKETIDMAAASPKEPP 552
Query: 1022 --IQDSE-------NNTEISINYVTSRRSWNRMEMIVDDSFAYNVALDVLQDNEDLDPTS 1174
I+D+E +N EISINY+ S WNR E+ VD+ FAY VA ++ +D+E PTS
Sbjct: 553 NEIRDAEAHGPEGIDNDEISINYIMSGIKWNRKEVDVDEKFAYEVAYEISEDHE---PTS 609
Query: 1175 V 1177
+
Sbjct: 610 I 610
>dbj|BAF36296.1| hypothetical protein [Ipomoea trifida]
Length = 1291
Score = 338 bits (866), Expect(2) = e-124
Identities = 155/219 (70%), Positives = 184/219 (84%)
Frame = +1
Query: 4 GQFRYFMVLIDASTRWSHVCLLSSRNLVFARLLAQIIRLRAQFPDHPIKKIRLDNAAEYC 183
G FRYFMVL DASTRW+HV LLS+RN FA+ +A+II L AQFPD+PIK IR+DNA E+
Sbjct: 228 GPFRYFMVLFDASTRWTHVSLLSTRNKAFAKFIAKIIELNAQFPDYPIKSIRMDNAGEFT 287
Query: 184 SHAFDAYCMSIGITIEHPVAYVHTQNGLAESFIKRLQLIARPLLMRTNLPTSAWGHAILH 363
S AF+ YCM++GI +EHPV YVHTQNGLAES IKR+++IARPLL ++ LP S WGHA+LH
Sbjct: 288 STAFNDYCMALGIKVEHPVPYVHTQNGLAESLIKRIKMIARPLLQKSGLPVSCWGHAVLH 347
Query: 364 AAALVRIRPTSYHKFSPLQLASGFEPNISHLRIFGCAVYVPIAPNQRTKMGPQRRLGIYV 543
AAAL++IRPT+YH +SPLQL G EPNI HLR+FGCAVY PI P RT MGPQR+LGIYV
Sbjct: 348 AAALIQIRPTAYHDYSPLQLLRGVEPNIFHLRVFGCAVYTPIPPTNRTSMGPQRKLGIYV 407
Query: 544 GYDSPSIIRYLEPLTGDVFTARFADCHFDESVFPKLGGE 660
GY+SPSII+YLEP+TGD FTAR+ADC FDE FP LGG+
Sbjct: 408 GYESPSIIKYLEPMTGDQFTARYADCIFDEDHFPALGGD 446
Score = 137 bits (345), Expect(2) = e-124
Identities = 82/198 (41%), Positives = 117/198 (59%), Gaps = 27/198 (13%)
Frame = +2
Query: 665 SKAKELDW-KTSLNYLDPRTSGSELEVQKIIHLQKIANQLPDAFANSTRVTKSHLPAIDA 841
+K +E+ W + L YLDPRTS +ELEVQKII+LQ +AN LPDAF ++ VT+SH+PA++A
Sbjct: 452 TKCREISWDEKDLQYLDPRTSQTELEVQKIINLQNLANNLPDAFTDNRGVTRSHIPAVNA 511
Query: 842 PIRVEVPKEQDPTPVAVESKSRQKRGRPLGSKDKNPRKKK-GSNDQS------------- 979
P RVEVPK + + ++ RQKRGRP+G+KD NPRK + G QS
Sbjct: 512 PSRVEVPK---GSGMHTDTPHRQKRGRPVGAKDLNPRKTRIGKISQSLPKNFSRPEDGEP 568
Query: 980 ------------DHVEQIDQEITDEKIQDSENNTEISINYVTSRRSWNRMEMIVDDSFAY 1123
+ E DQ I + N E +IN+V + ++NR ++VDD+FAY
Sbjct: 569 SESARALNKLNTGNAEHPDQNILGNDNDLVDINIETAINFVDTGETYNRDLIVVDDTFAY 628
Query: 1124 NVALDVLQDNEDLDPTSV 1177
VA ++ +N D +P S+
Sbjct: 629 AVAHNIPHNNLDPEPKSI 646
>gb|AAS79613.1| putative copia-like polyprotein [Ipomoea trifida]
Length = 1190
Score = 338 bits (866), Expect(2) = e-124
Identities = 155/219 (70%), Positives = 184/219 (84%)
Frame = +1
Query: 4 GQFRYFMVLIDASTRWSHVCLLSSRNLVFARLLAQIIRLRAQFPDHPIKKIRLDNAAEYC 183
G FRYFMVL DASTRW+HV LLS+RN FA+ +A+II L AQFPD+PIK IR+DNA E+
Sbjct: 228 GPFRYFMVLFDASTRWTHVSLLSTRNKAFAKFIAKIIELNAQFPDYPIKSIRMDNAGEFT 287
Query: 184 SHAFDAYCMSIGITIEHPVAYVHTQNGLAESFIKRLQLIARPLLMRTNLPTSAWGHAILH 363
S AF+ YCM++GI +EHPV YVHTQNGLAES IKR+++IARPLL ++ LP S WGHA+LH
Sbjct: 288 STAFNDYCMALGIKVEHPVPYVHTQNGLAESLIKRIKMIARPLLQKSGLPVSCWGHAVLH 347
Query: 364 AAALVRIRPTSYHKFSPLQLASGFEPNISHLRIFGCAVYVPIAPNQRTKMGPQRRLGIYV 543
AAAL++IRPT+YH +SPLQL G EPNI HLR+FGCAVY PI P RT MGPQR+LGIYV
Sbjct: 348 AAALIQIRPTAYHDYSPLQLLRGVEPNIFHLRVFGCAVYTPIPPTNRTSMGPQRKLGIYV 407
Query: 544 GYDSPSIIRYLEPLTGDVFTARFADCHFDESVFPKLGGE 660
GY+SPSII+YLEP+TGD FTAR+ADC FDE FP LGG+
Sbjct: 408 GYESPSIIKYLEPMTGDQFTARYADCIFDEDHFPALGGD 446
Score = 137 bits (345), Expect(2) = e-124
Identities = 82/198 (41%), Positives = 117/198 (59%), Gaps = 27/198 (13%)
Frame = +2
Query: 665 SKAKELDW-KTSLNYLDPRTSGSELEVQKIIHLQKIANQLPDAFANSTRVTKSHLPAIDA 841
+K +E+ W + L YLDPRTS +ELEVQKII+LQ +AN LPDAF ++ VT+SH+PA++A
Sbjct: 452 TKCREISWDEKDLQYLDPRTSQTELEVQKIINLQNLANNLPDAFTDNRGVTRSHIPAVNA 511
Query: 842 PIRVEVPKEQDPTPVAVESKSRQKRGRPLGSKDKNPRKKK-GSNDQS------------- 979
P RVEVPK + + ++ RQKRGRP+G+KD NPRK + G QS
Sbjct: 512 PSRVEVPK---GSGMHTDTPHRQKRGRPVGAKDLNPRKTRIGKISQSLPKNFSRPEDGEP 568
Query: 980 ------------DHVEQIDQEITDEKIQDSENNTEISINYVTSRRSWNRMEMIVDDSFAY 1123
+ E DQ I + N E +IN+V + ++NR ++VDD+FAY
Sbjct: 569 SESARALNKLNTGNAEHPDQNILGNDNDLVDINIETAINFVDTGETYNRDLIVVDDTFAY 628
Query: 1124 NVALDVLQDNEDLDPTSV 1177
VA ++ +N D +P S+
Sbjct: 629 AVAHNIPHNNLDPEPKSI 646
>gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1508
Score = 358 bits (920), Expect(2) = e-124
Identities = 166/220 (75%), Positives = 193/220 (87%)
Frame = +1
Query: 1 CGQFRYFMVLIDASTRWSHVCLLSSRNLVFARLLAQIIRLRAQFPDHPIKKIRLDNAAEY 180
CG FRYFMVL+DASTRWSHV L+S+RN FA+LLAQII+LRA PDHPIK IRLDNA E+
Sbjct: 515 CGPFRYFMVLVDASTRWSHVMLVSTRNAAFAKLLAQIIKLRAHHPDHPIKSIRLDNAGEF 574
Query: 181 CSHAFDAYCMSIGITIEHPVAYVHTQNGLAESFIKRLQLIARPLLMRTNLPTSAWGHAIL 360
S FD YCMSIGI +EHPV +VHTQNGLAE+ IKRLQ++AR L+MRTNLP SAWG+AIL
Sbjct: 575 TSKTFDDYCMSIGIDVEHPVPHVHTQNGLAEAAIKRLQMVARALVMRTNLPISAWGYAIL 634
Query: 361 HAAALVRIRPTSYHKFSPLQLASGFEPNISHLRIFGCAVYVPIAPNQRTKMGPQRRLGIY 540
HA+ L+R+RPT+ FS Q+ +G+EPN+SHLRIFGCAVYVPIAP QRTKMGPQRRLG+Y
Sbjct: 635 HASVLIRLRPTATQPFSASQMVTGYEPNVSHLRIFGCAVYVPIAPPQRTKMGPQRRLGVY 694
Query: 541 VGYDSPSIIRYLEPLTGDVFTARFADCHFDESVFPKLGGE 660
VGYDSP+IIRY+EPL GD+FTARFADCHFDE+VFP LGG+
Sbjct: 695 VGYDSPTIIRYIEPLIGDLFTARFADCHFDETVFPSLGGD 734
Score = 116 bits (290), Expect(2) = e-124
Identities = 69/204 (33%), Positives = 110/204 (53%), Gaps = 37/204 (18%)
Frame = +2
Query: 677 ELDWKT-SLNYLDPRTSGSELEVQKIIHLQKIANQLPDAFANSTRVTKSHLPAIDAPIRV 853
EL W +L++LDPRT+ SE+EV++I+ LQ +A +PDAF++ +VT+SH+PA + P R+
Sbjct: 745 ELSWSVPTLSHLDPRTAQSEIEVRRILDLQNVAESMPDAFSDIAKVTRSHIPAANVPARI 804
Query: 854 EVPKEQ-------------------DPTPVAVESKSRQKRGRPLGSKDKNPRKKKGSNDQ 976
+VPK + D +A + +KRGRP+GS+D PRKK
Sbjct: 805 DVPKSRGHDANSRMHEHGANVPSLNDGDVMARPTAPARKRGRPIGSRDSRPRKKASLAQN 864
Query: 977 SDHVEQIDQEITDEKIQD-----------------SENNTEISINYVTSRRSWNRMEMIV 1105
+ + I+ + E I D + N EISINY + +R M +
Sbjct: 865 NPLIIDINNP-SHENIPDYGYVQETSLGDAPMSEPTPENREISINYTSVHEMMDRNSMAI 923
Query: 1106 DDSFAYNVALDVLQDNEDLDPTSV 1177
DD+FAY++A ++ + +D++P SV
Sbjct: 924 DDAFAYHIAKGII-EYDDIEPRSV 946
>gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana]
Length = 1141
Score = 329 bits (844), Expect(2) = e-124
Identities = 157/220 (71%), Positives = 181/220 (82%)
Frame = +1
Query: 1 CGQFRYFMVLIDASTRWSHVCLLSSRNLVFARLLAQIIRLRAQFPDHPIKKIRLDNAAEY 180
CG FRYFMVLIDASTRWSH IIRLRA FPD P+K IRLDNA E+
Sbjct: 224 CGTFRYFMVLIDASTRWSH-----------------IIRLRAHFPDFPLKTIRLDNAGEF 266
Query: 181 CSHAFDAYCMSIGITIEHPVAYVHTQNGLAESFIKRLQLIARPLLMRTNLPTSAWGHAIL 360
S AF+ YCMS+G+++EHPVA+VHTQNGLAESFIKR+QLIARPLLMR+ LP +AWGHA+L
Sbjct: 267 TSQAFNDYCMSMGVSVEHPVAHVHTQNGLAESFIKRIQLIARPLLMRSRLPVAAWGHAVL 326
Query: 361 HAAALVRIRPTSYHKFSPLQLASGFEPNISHLRIFGCAVYVPIAPNQRTKMGPQRRLGIY 540
HA+ L+RIRP+S HK+SP QL +G EP+ISHLR FGCAVYVPIAP QRTKMGPQRR+GIY
Sbjct: 327 HASELIRIRPSSEHKYSPSQLLTGHEPDISHLRTFGCAVYVPIAPPQRTKMGPQRRMGIY 386
Query: 541 VGYDSPSIIRYLEPLTGDVFTARFADCHFDESVFPKLGGE 660
VG+DSP+II+YLEP TGD+F AR+ADCHF ES FP LGGE
Sbjct: 387 VGFDSPTIIKYLEPTTGDLFKARYADCHFSESEFPALGGE 426
Score = 145 bits (365), Expect(2) = e-124
Identities = 84/181 (46%), Positives = 116/181 (64%), Gaps = 13/181 (7%)
Frame = +2
Query: 674 KELDW-KTSLNYLDPRTSGSELEVQKIIHLQKIANQLPDAFANSTRVTKSHLPAIDAPIR 850
KE+ W +TSLN+ DP+T + EV KIIHLQK+AN+LPD+FA+ RV KS++PA +A +R
Sbjct: 435 KEIAWNQTSLNWQDPQTLMCDSEVHKIIHLQKLANELPDSFADPKRVVKSYIPACNAQVR 494
Query: 851 VEVPKEQDPTPVAVESKSRQKRGRPLGSKDKNPRKKKGSNDQSDHVEQIDQEITDEK--- 1021
+++ K +A ES ++KRGRP+GSKDK PRK K ++ E ID K
Sbjct: 495 IDIQK--GINVIATESNPQKKRGRPVGSKDKIPRKTKKGAMGTEVKETIDMAAASPKEPP 552
Query: 1022 --IQDSE-------NNTEISINYVTSRRSWNRMEMIVDDSFAYNVALDVLQDNEDLDPTS 1174
I+D+E +N EISINY+ S WNR E+ VD+ FAY VA ++ NED +PTS
Sbjct: 553 NEIRDAEAHGPEGIDNDEISINYIMSGIKWNRKEVDVDEKFAYEVAYEI---NEDHEPTS 609
Query: 1175 V 1177
+
Sbjct: 610 I 610
>emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]
Length = 1306
Score = 322 bits (826), Expect(2) = e-121
Identities = 156/194 (80%), Positives = 170/194 (87%)
Frame = +1
Query: 79 NLVFARLLAQIIRLRAQFPDHPIKKIRLDNAAEYCSHAFDAYCMSIGITIEHPVAYVHTQ 258
N+ FARLLAQIIRLRAQFPD+PIK IRLDNA E+ S F Y MS+GI IEHPVA+ HTQ
Sbjct: 471 NVAFARLLAQIIRLRAQFPDYPIKTIRLDNAGEFTSQTFIDYXMSVGINIEHPVAHTHTQ 530
Query: 259 NGLAESFIKRLQLIARPLLMRTNLPTSAWGHAILHAAALVRIRPTSYHKFSPLQLASGFE 438
NGLAESFIKRLQLIARPLLM+T LPTSAWGHAI+H AALVRIRPT+YH++SP QL G +
Sbjct: 531 NGLAESFIKRLQLIARPLLMKTKLPTSAWGHAIMHXAALVRIRPTTYHEYSPSQLVLGKQ 590
Query: 439 PNISHLRIFGCAVYVPIAPNQRTKMGPQRRLGIYVGYDSPSIIRYLEPLTGDVFTARFAD 618
PNI HLRIFGCAVYVPIAP Q TKMGPQRRLG+YVG+DSPSII YLEPL GDVFTARFAD
Sbjct: 591 PNIXHLRIFGCAVYVPIAPTQXTKMGPQRRLGVYVGFDSPSIIXYLEPLXGDVFTARFAD 650
Query: 619 CHFDESVFPKLGGE 660
CHF+ESVFP LG E
Sbjct: 651 CHFNESVFPSLGRE 664
Score = 141 bits (356), Expect(2) = e-121
Identities = 76/184 (41%), Positives = 119/184 (64%), Gaps = 6/184 (3%)
Frame = +2
Query: 644 PN*GENKS---KAKELDWKTS-LNYLDPRTSGSELEVQKIIHLQKIANQLPDAFANSTRV 811
P+ G KS + +E+ WKTS + +LDPRT+ ELEVQ+IIHLQ + NQLPDAF ++ +V
Sbjct: 659 PSLGREKSIPEERREISWKTSTMTHLDPRTNQCELEVQRIIHLQNLXNQLPDAFIDTKKV 718
Query: 812 TKSHLPAIDAPIRVEVPKEQDPTPVAVESKSRQKRGRPLGSKDKNPRKKKGSNDQSDHVE 991
TKSH+PA + P R++VP Q + ESK R KRGRP+GSKD + ++ +
Sbjct: 719 TKSHIPAANTPARIDVPVGQ----LTNESKIRLKRGRPVGSKDVHIEQEAPEEAHIEQET 774
Query: 992 QIDQEITDEKIQDSE--NNTEISINYVTSRRSWNRMEMIVDDSFAYNVALDVLQDNEDLD 1165
D I E ++++ N EIS++YV + W+R +++++ FA+ VA D+++++ED +
Sbjct: 775 PEDPHIEREAPEEAQVPENCEISVSYVQTGEKWDRNNIVINNIFAFQVASDIIRNDEDPE 834
Query: 1166 PTSV 1177
P +V
Sbjct: 835 PRNV 838
>gb|AFP55573.1| retrotransposon protein [Rosa rugosa]
Length = 2242
Score = 360 bits (923), Expect(2) = e-121
Identities = 168/220 (76%), Positives = 193/220 (87%)
Frame = +1
Query: 1 CGQFRYFMVLIDASTRWSHVCLLSSRNLVFARLLAQIIRLRAQFPDHPIKKIRLDNAAEY 180
CG FRYFMVL+DASTRWSHV LLS+RN FA+LLAQII+LRA +PDHPIK I LDNA E+
Sbjct: 572 CGPFRYFMVLVDASTRWSHVMLLSTRNAAFAKLLAQIIKLRAHYPDHPIKSITLDNAGEF 631
Query: 181 CSHAFDAYCMSIGITIEHPVAYVHTQNGLAESFIKRLQLIARPLLMRTNLPTSAWGHAIL 360
S FD YCMSIGI +EHPV +VHTQNGLAE+ IKRLQ++AR L+MRTNLP SAWG+AIL
Sbjct: 632 TSKTFDDYCMSIGIDVEHPVPHVHTQNGLAEAAIKRLQMVARALVMRTNLPISAWGYAIL 691
Query: 361 HAAALVRIRPTSYHKFSPLQLASGFEPNISHLRIFGCAVYVPIAPNQRTKMGPQRRLGIY 540
HAA L+ +RPT+ FS Q+ +G+EPN+SHLRIFGCAVYVPIAP QRTKMGPQRRLGIY
Sbjct: 692 HAAVLICLRPTATQPFSASQMVTGYEPNVSHLRIFGCAVYVPIAPPQRTKMGPQRRLGIY 751
Query: 541 VGYDSPSIIRYLEPLTGDVFTARFADCHFDESVFPKLGGE 660
VGYDSP+IIRY+EPLTGD+FTARFADCHFDE+VFP LGG+
Sbjct: 752 VGYDSPTIIRYIEPLTGDLFTARFADCHFDETVFPSLGGD 791
Score = 103 bits (257), Expect(2) = e-121
Identities = 58/175 (33%), Positives = 103/175 (58%), Gaps = 3/175 (1%)
Frame = +2
Query: 662 KSKAKELDWKT-SLNYLDPRTSGSELEVQKIIHLQKIANQLPDAFANSTRVTKSHLPAID 838
+ + +EL W +L++LDPRT+ SE+EV++I+ LQ +A +PDAF++ +VT+SH+PA +
Sbjct: 797 QQERQELSWSVPTLSHLDPRTAQSEIEVRRILDLQNVAESMPDAFSDIAKVTRSHIPAAN 856
Query: 839 APIRVEVPKEQDPTPVAVESKSR-QKRGRPLGSKDKNPRKKKGSNDQSDHVEQIDQEITD 1015
P R+EVPK + ++ SR + G + S + + + I+ + D
Sbjct: 857 VPARIEVPKSR-----GHDANSRMHEHGANVPSLNDGDAMARPTAPARKRGRPIETSLGD 911
Query: 1016 EKIQD-SENNTEISINYVTSRRSWNRMEMIVDDSFAYNVALDVLQDNEDLDPTSV 1177
+ + + N EISINY + +R M +DD+FAY++A ++ + +D++P SV
Sbjct: 912 APMSEPTPENREISINYTSVHEMMDRNSMAIDDAFAYHIAKGII-EYDDIEPRSV 965
>ref|XP_004288697.1| PREDICTED: uncharacterized protein LOC101308809 [Fragaria vesca
subsp. vesca]
Length = 572
Score = 338 bits (868), Expect(2) = e-115
Identities = 157/220 (71%), Positives = 187/220 (85%)
Frame = +1
Query: 1 CGQFRYFMVLIDASTRWSHVCLLSSRNLVFARLLAQIIRLRAQFPDHPIKKIRLDNAAEY 180
CG FRYFMVL+DASTRW+H+ LLS+RN F +LL QII+LRA PD+PIK IRLDNA E+
Sbjct: 126 CGPFRYFMVLVDASTRWTHIALLSTRNAAFPKLLTQIIKLRAHHPDYPIKSIRLDNAGEF 185
Query: 181 CSHAFDAYCMSIGITIEHPVAYVHTQNGLAESFIKRLQLIARPLLMRTNLPTSAWGHAIL 360
S FD YCMSIGI +EHP+ +VHTQNGLAE+ IKRLQLI+R L+MRTNLP ++WG+AIL
Sbjct: 186 TSKTFDDYCMSIGIEVEHPLPHVHTQNGLAEATIKRLQLISRALVMRTNLPIASWGYAIL 245
Query: 361 HAAALVRIRPTSYHKFSPLQLASGFEPNISHLRIFGCAVYVPIAPNQRTKMGPQRRLGIY 540
HAA L+R RPT+ FS QL +G+EP+ISHLRIFGC+VYVPI P QR+KMGPQRRLGIY
Sbjct: 246 HAALLIRFRPTAKQPFSAYQLVTGYEPDISHLRIFGCSVYVPITPPQRSKMGPQRRLGIY 305
Query: 541 VGYDSPSIIRYLEPLTGDVFTARFADCHFDESVFPKLGGE 660
VGY+SP+IIRYLEPLT D+FTARF DCHFDE++FP L G+
Sbjct: 306 VGYESPTIIRYLEPLTSDLFTARFTDCHFDETLFPSLEGD 345
Score = 105 bits (262), Expect(2) = e-115
Identities = 72/203 (35%), Positives = 111/203 (54%), Gaps = 35/203 (17%)
Frame = +2
Query: 674 KELDWKT-SLNYLDPRTSGSELEVQKIIHLQKIANQLPDAFANSTRVTKSHLPAIDAPIR 850
+EL W +L++ DPRTS SE EV++I+ LQK+A+++PD+F+ +VT+S++PA + P R
Sbjct: 355 QELSWFVPTLSHYDPRTSQSEREVKRILELQKVADKMPDSFSEIAKVTRSNIPAANVPAR 414
Query: 851 VEVPKEQDPTP----VAVESKS----------RQKRGRPLGSKDKNPRKKKGSNDQSD-- 982
EVP++ P AV + ++KRGRP GS D PRKK+ Q +
Sbjct: 415 FEVPRKGTAIPGLGTAAVGGAAHGGGMEAVAPQRKRGRPPGSVDTRPRKKRTDKAQVNPL 474
Query: 983 --HVEQIDQEITD----------EKIQD------SENNTEISINYVTSRRSWNRMEMIVD 1108
VE + EI E + D + N EIS+ Y + NR VD
Sbjct: 475 IIDVENLSHEIISDYSYVHELILESMGDASGSMSTSENIEISMCYDNTYELMNRSSTHVD 534
Query: 1109 DSFAYNVALDVLQDNEDLDPTSV 1177
D FAY+VA +++ +++D++P SV
Sbjct: 535 DIFAYSVAHEII-EHDDIEPRSV 556
>emb|CAN68953.1| hypothetical protein VITISV_016199 [Vitis vinifera]
Length = 952
Score = 347 bits (891), Expect(2) = e-111
Identities = 167/220 (75%), Positives = 184/220 (83%)
Frame = +1
Query: 1 CGQFRYFMVLIDASTRWSHVCLLSSRNLVFARLLAQIIRLRAQFPDHPIKKIRLDNAAEY 180
CG FRYFM+LIDASTRWS VCL+S+ N FARLLAQIIR AQFP++PIK I LDNA E+
Sbjct: 285 CGSFRYFMILIDASTRWSDVCLISTHNTAFARLLAQIIRSXAQFPBYPIKTIXLDNAGEF 344
Query: 181 CSHAFDAYCMSIGITIEHPVAYVHTQNGLAESFIKRLQLIARPLLMRTNLPTSAWGHAIL 360
S F YCMS+GI IEHPVA H QNGLAESFIKRLQLI RPLLM+T LPTSAWGHAI+
Sbjct: 345 TSQTFIDYCMSVGINIEHPVARTHXQNGLAESFIKRLQLITRPLLMKTKLPTSAWGHAIM 404
Query: 361 HAAALVRIRPTSYHKFSPLQLASGFEPNISHLRIFGCAVYVPIAPNQRTKMGPQRRLGIY 540
HAA LVRI+PT+YH++SP QL G +PNISHL +FGC VYVPIA QRTKMG QRRL IY
Sbjct: 405 HAATLVRIQPTTYHEYSPSQLVLGKQPNISHLLVFGCTVYVPIALTQRTKMGSQRRLEIY 464
Query: 541 VGYDSPSIIRYLEPLTGDVFTARFADCHFDESVFPKLGGE 660
VG+DSP IIRYLEPLT DVFT RFADCHF+ESVFP LGGE
Sbjct: 465 VGFDSPFIIRYLEPLTDDVFTTRFADCHFNESVFPSLGGE 504
Score = 82.0 bits (201), Expect(2) = e-111
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Frame = +2
Query: 683 DWKTS-LNYLDPRTSGSELEVQKIIHLQKIANQLPDAFANSTRVTKSHLPAIDAPIRVEV 859
+WK S + +LDPRT+ EL VQ+II+LQ +ANQLPDAF ++ +VTKSH+ P R++V
Sbjct: 505 NWKVSTMTHLDPRTNQCELXVQRIIYLQNLANQLPDAFIDTKKVTKSHILTAKTPARIDV 564
Query: 860 PKEQDPTPVAVESKSRQKRGRPLGSKD 940
P Q + ESK R GR +GSKD
Sbjct: 565 PVGQ----LTNESKIRLXXGRXVGSKD 587
>emb|CAN72351.1| hypothetical protein VITISV_019853 [Vitis vinifera]
Length = 333
Score = 386 bits (991), Expect(2) = e-107
Identities = 184/220 (83%), Positives = 200/220 (90%)
Frame = +1
Query: 1 CGQFRYFMVLIDASTRWSHVCLLSSRNLVFARLLAQIIRLRAQFPDHPIKKIRLDNAAEY 180
CG FRYFM+LIDASTRWSHVCLLS+RN+ FARLLAQIIRLRAQFPD+PIK IRLDNA E+
Sbjct: 67 CGPFRYFMILIDASTRWSHVCLLSTRNVAFARLLAQIIRLRAQFPDYPIKTIRLDNAGEF 126
Query: 181 CSHAFDAYCMSIGITIEHPVAYVHTQNGLAESFIKRLQLIARPLLMRTNLPTSAWGHAIL 360
S F YCMS+GI IEHPVA+ HTQNGLAESFIKRLQLIARPLLM+T LPTSAWGHAI+
Sbjct: 127 TSQTFIDYCMSVGINIEHPVAHTHTQNGLAESFIKRLQLIARPLLMKTKLPTSAWGHAIM 186
Query: 361 HAAALVRIRPTSYHKFSPLQLASGFEPNISHLRIFGCAVYVPIAPNQRTKMGPQRRLGIY 540
HAAALVRIRPT+YH++SP QL G +PNISHLRIFGCAVYVPIAP QRTKMGPQRRLG+Y
Sbjct: 187 HAAALVRIRPTTYHEYSPSQLVLGKQPNISHLRIFGCAVYVPIAPTQRTKMGPQRRLGVY 246
Query: 541 VGYDSPSIIRYLEPLTGDVFTARFADCHFDESVFPKLGGE 660
VG+DSPSIIRYLEPLTGD FTARFADCHF+ESVFP LG E
Sbjct: 247 VGFDSPSIIRYLEPLTGDXFTARFADCHFNESVFPSLGRE 286
Score = 31.6 bits (70), Expect(2) = e-107
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Frame = +2
Query: 644 PN*GENKS---KAKELDWKTS-LNYLDPRTSGSELE 739
P+ G KS + +E+ WKTS + +LDPRT+ ELE
Sbjct: 281 PSLGREKSIPEERREISWKTSTMTHLDPRTNQCELE 316
>emb|CAN71782.1| hypothetical protein VITISV_028677 [Vitis vinifera]
Length = 1383
Score = 284 bits (727), Expect(2) = e-107
Identities = 138/172 (80%), Positives = 150/172 (87%)
Frame = +1
Query: 145 IKKIRLDNAAEYCSHAFDAYCMSIGITIEHPVAYVHTQNGLAESFIKRLQLIARPLLMRT 324
I +IRLDNA E+ S F YCMSIGI IEH VA+ HTQNGLAESFIKRLQLIARPLLM+T
Sbjct: 542 IIQIRLDNAGEFTSQTFIDYCMSIGINIEHLVAHTHTQNGLAESFIKRLQLIARPLLMKT 601
Query: 325 NLPTSAWGHAILHAAALVRIRPTSYHKFSPLQLASGFEPNISHLRIFGCAVYVPIAPNQR 504
LPTSAWGHAI+HA ALVRIRPT+YH++SP QL G +PNISHLRIFGCAVYVPIAP QR
Sbjct: 602 KLPTSAWGHAIMHATALVRIRPTTYHEYSPSQLVLGKQPNISHLRIFGCAVYVPIAPTQR 661
Query: 505 TKMGPQRRLGIYVGYDSPSIIRYLEPLTGDVFTARFADCHFDESVFPKLGGE 660
TK GPQRRL +YVG+DSPSIIRYLEPLT DVFTARFADCHF+ESVFP LG E
Sbjct: 662 TKTGPQRRLEVYVGFDSPSIIRYLEPLTSDVFTARFADCHFNESVFPSLGKE 713
Score = 132 bits (332), Expect(2) = e-107
Identities = 78/209 (37%), Positives = 118/209 (56%), Gaps = 31/209 (14%)
Frame = +2
Query: 644 PN*GENKS---KAKELDWKTS-LNYLDPRTSGSELEVQKIIHLQKIANQLPDAFANSTRV 811
P+ G+ KS + +E+ WK S + +LDPRT+ ELEVQ+IIHLQ + NQLPDAF + +V
Sbjct: 708 PSLGKEKSIPEERREIIWKASTMTHLDPRTNQCELEVQRIIHLQNLTNQLPDAFIDIKKV 767
Query: 812 TKSHLPAIDAPIRVEVPKEQDPTPVAVESKSRQKRGRPLGSKDKNPRKKKGS---NDQSD 982
TKSH+P + R++VP Q + ESK R KRGRP+GSKD PRK++ D
Sbjct: 768 TKSHIPTANTSARIDVPVGQ----LTNESKIRLKRGRPVGSKDVTPRKRRTQEKLGTLED 823
Query: 983 HVEQIDQEITDEKIQDSE------------------------NNTEISINYVTSRRSWNR 1090
++ DQ D+ I E N EIS++YV + W+R
Sbjct: 824 TIKMTDQVKIDKSIALEEAQIMQKTLEEAHIEQEAPEEAQVPENCEISVSYVQTGEKWDR 883
Query: 1091 MEMIVDDSFAYNVALDVLQDNEDLDPTSV 1177
+++++ FA+ V D+++++ED +P +V
Sbjct: 884 NNIVINNIFAFQVTSDIIRNDEDPEPRNV 912
>emb|CAN76956.1| hypothetical protein VITISV_022305 [Vitis vinifera]
Length = 973
Score = 322 bits (826), Expect(2) = e-107
Identities = 160/220 (72%), Positives = 176/220 (80%)
Frame = +1
Query: 1 CGQFRYFMVLIDASTRWSHVCLLSSRNLVFARLLAQIIRLRAQFPDHPIKKIRLDNAAEY 180
CG FRYFM+LIDASTRWSHVCL+S+RN+ FARLLAQIIRLRAQFPD+ IK I L N E+
Sbjct: 269 CGPFRYFMILIDASTRWSHVCLISTRNVXFARLLAQIIRLRAQFPDYXIKTIXLXNVGEF 328
Query: 181 CSHAFDAYCMSIGITIEHPVAYVHTQNGLAESFIKRLQLIARPLLMRTNLPTSAWGHAIL 360
S F YCMS+GI IEHPVA+ HTQN LAESFIKRLQLIARPLLM+T LPTSAWGHAI+
Sbjct: 329 TSQTFIDYCMSVGINIEHPVAHTHTQNXLAESFIKRLQLIARPLLMKTKLPTSAWGHAIM 388
Query: 361 HAAALVRIRPTSYHKFSPLQLASGFEPNISHLRIFGCAVYVPIAPNQRTKMGPQRRLGIY 540
HA LVRIRP +YH++S QL G +PNISHLRIFGCAVYVPI P RTKM
Sbjct: 389 HATTLVRIRPITYHEYSLSQLVLGKQPNISHLRIFGCAVYVPITPTXRTKM--------- 439
Query: 541 VGYDSPSIIRYLEPLTGDVFTARFADCHFDESVFPKLGGE 660
G+DSPSII YLEP T DVFTARFAD HF+ESVFP LG E
Sbjct: 440 -GFDSPSIIXYLEPFTXDVFTARFADFHFNESVFPSLGRE 478
Score = 93.2 bits (230), Expect(2) = e-107
Identities = 52/121 (42%), Positives = 75/121 (61%), Gaps = 4/121 (3%)
Frame = +2
Query: 644 PN*GENKS---KAKELDWKTS-LNYLDPRTSGSELEVQKIIHLQKIANQLPDAFANSTRV 811
P+ G KS + +E+ WK S + +LDPRT+ ELEVQ+I+HLQ +AN+LPDAF + +V
Sbjct: 473 PSLGREKSIPEERREISWKXSTMTHLDPRTNQCELEVQRIVHLQNLANRLPDAFIDIKKV 532
Query: 812 TKSHLPAIDAPIRVEVPKEQDPTPVAVESKSRQKRGRPLGSKDKNPRKKKGSNDQSDHVE 991
TKSH+PA + P ++V + ESK K GRP+GSKDK P + + + +
Sbjct: 533 TKSHIPAANTPTWIDVL----VXXLTNESKILLKCGRPVGSKDKXPEEAHIEQEAPEEAQ 588
Query: 992 Q 994
Q
Sbjct: 589 Q 589
>emb|CAN83411.1| hypothetical protein VITISV_037202 [Vitis vinifera]
Length = 361
Score = 383 bits (983), Expect(2) = e-107
Identities = 185/222 (83%), Positives = 201/222 (90%), Gaps = 2/222 (0%)
Frame = +1
Query: 1 CGQFRYFMVLIDASTRWSHVCLLSSRNLVFARLLAQIIRLRAQFPDHPIKKIRLDNAAEY 180
CG FRYFM+LIDASTRWSHVCLLS+RN+ FARLLAQIIRLRAQFPD+PIK IRLDNA E+
Sbjct: 66 CGPFRYFMILIDASTRWSHVCLLSTRNVAFARLLAQIIRLRAQFPDYPIKTIRLDNAGEF 125
Query: 181 CSHAFDAYCMSIGITIEHPVAYVHT--QNGLAESFIKRLQLIARPLLMRTNLPTSAWGHA 354
S F YCMS+GI IEHPVA+ HT QNGLAESFIKRLQLIARPLLM+T LPTSAWGHA
Sbjct: 126 TSQTFIDYCMSVGINIEHPVAHTHTHTQNGLAESFIKRLQLIARPLLMKTKLPTSAWGHA 185
Query: 355 ILHAAALVRIRPTSYHKFSPLQLASGFEPNISHLRIFGCAVYVPIAPNQRTKMGPQRRLG 534
I+HAAALVRIRPT+YH++SP QL G +PNISHLRIFGCAVYVPIAP QRTKMGPQRRLG
Sbjct: 186 IMHAAALVRIRPTTYHEYSPSQLVLGKQPNISHLRIFGCAVYVPIAPTQRTKMGPQRRLG 245
Query: 535 IYVGYDSPSIIRYLEPLTGDVFTARFADCHFDESVFPKLGGE 660
+YVG+DSPSIIRYLEPLTGDVFTARFADCHF+ESVFP LG E
Sbjct: 246 VYVGFDSPSIIRYLEPLTGDVFTARFADCHFNESVFPSLGRE 287
Score = 32.7 bits (73), Expect(2) = e-107
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Frame = +2
Query: 644 PN*GENKS---KAKELDWKTS-LNYLDPRTSGSELEVQKIIHLQK 766
P+ G KS + +E+ WKTS + +LDPRT+ ELE K L K
Sbjct: 282 PSLGREKSIPEERREISWKTSTMTHLDPRTNQCELEPLKRYILNK 326
>emb|CAE03711.2| OSJNBa0021F22.5 [Oryza sativa Japonica Group]
Length = 911
Score = 325 bits (832), Expect(2) = e-106
Identities = 150/219 (68%), Positives = 183/219 (83%)
Frame = +1
Query: 4 GQFRYFMVLIDASTRWSHVCLLSSRNLVFARLLAQIIRLRAQFPDHPIKKIRLDNAAEYC 183
G FRYFMVLIDASTRWSHVCLLS+RN FA+L++QIIRL+A +P+H I+ IR+DN AE+
Sbjct: 232 GPFRYFMVLIDASTRWSHVCLLSTRNHAFAKLMSQIIRLKANYPEHRIQSIRMDNTAEFT 291
Query: 184 SHAFDAYCMSIGITIEHPVAYVHTQNGLAESFIKRLQLIARPLLMRTNLPTSAWGHAILH 363
SHAFD YCM++GI ++H V YVHTQNGLAES IKR++LIARPLLM LP+S WGHA+LH
Sbjct: 292 SHAFDDYCMALGIQVQHSVPYVHTQNGLAESLIKRIKLIARPLLMNCKLPSSCWGHAVLH 351
Query: 364 AAALVRIRPTSYHKFSPLQLASGFEPNISHLRIFGCAVYVPIAPNQRTKMGPQRRLGIYV 543
AA LV++RPT+YH+ SP+QL G P+ISHLR FGCAVY+PI+P Q + MGP R++GIY
Sbjct: 352 AADLVQLRPTAYHETSPMQLVCGNPPSISHLRKFGCAVYIPISPPQHSTMGPHRKVGIYA 411
Query: 544 GYDSPSIIRYLEPLTGDVFTARFADCHFDESVFPKLGGE 660
G+ SPSII+YLEPLTGD+FT RFAD FDE FP LGG+
Sbjct: 412 GFKSPSIIKYLEPLTGDLFTTRFADSIFDEEHFPALGGD 450
Score = 89.7 bits (221), Expect(2) = e-106
Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 32/204 (15%)
Frame = +2
Query: 662 KSKAKELDWKTS-LNYLDPRTSGSELEVQKIIHLQKIANQLPDAFANSTRVTKSHLPAID 838
+ + +E+DW + DPRT+ +EL+VQKII+LQ++AN LPD F N VTKS +PA +
Sbjct: 454 QKECQEIDWDAQGIPASDPRTTETELQVQKIIYLQRLANNLPDVFTNYKGVTKSFIPAQN 513
Query: 839 APIRVEVPKEQDPTPVAVESKSRQKRGRPLGSKDK----NPRKKKGSND------QSDHV 988
AP RVEVP + P+ +KRGR + ++ + RK +N Q D +
Sbjct: 514 APERVEVPNKTTQLPLT------KKRGRSMATQRETIANKQRKTVNANQPLVGTHQIDTI 567
Query: 989 EQIDQE-------ITDEKIQDSENN--------------TEISINYVTSRRSWNRMEMIV 1105
Q D++ + + + ++SE + EI+INY + S++R IV
Sbjct: 568 YQADRDSLQPSSVVHNAETRNSEEHRHIVSGDHDKSIRVDEIAINYSETGESFDRRATIV 627
Query: 1106 DDSFAYNVALDVLQDNEDLDPTSV 1177
D +F+ +A D LQ D +P S+
Sbjct: 628 DTNFSEQIA-DFLQ--VDPEPRSI 648
>gb|ABF96803.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1469
Score = 313 bits (803), Expect(2) = e-105
Identities = 148/219 (67%), Positives = 181/219 (82%)
Frame = +1
Query: 4 GQFRYFMVLIDASTRWSHVCLLSSRNLVFARLLAQIIRLRAQFPDHPIKKIRLDNAAEYC 183
G FRYFMV IDASTRW+HV LLS+RN F++L+AQIIRLRA FPD+ I+ IR+DNA E+
Sbjct: 570 GPFRYFMVFIDASTRWNHVDLLSTRNHGFSKLIAQIIRLRASFPDNRIQSIRMDNAGEFR 629
Query: 184 SHAFDAYCMSIGITIEHPVAYVHTQNGLAESFIKRLQLIARPLLMRTNLPTSAWGHAILH 363
S AFD YC+++GI++EH V +VHTQNGLAES IKR++ IARPLL LPTS WGHA+LH
Sbjct: 630 SKAFDDYCLAMGISVEHSVPHVHTQNGLAESLIKRIKWIARPLLQNCKLPTSCWGHAVLH 689
Query: 364 AAALVRIRPTSYHKFSPLQLASGFEPNISHLRIFGCAVYVPIAPNQRTKMGPQRRLGIYV 543
AAAL+++RPT+YH SP QL G EP+ISHLRIFGCAVYVPI P QRT MG R++G+YV
Sbjct: 690 AAALIQLRPTAYHDTSPSQLVRGKEPSISHLRIFGCAVYVPIPPPQRTSMGHHRKMGVYV 749
Query: 544 GYDSPSIIRYLEPLTGDVFTARFADCHFDESVFPKLGGE 660
GY++PSII+YLEP+TGD+ TAR+ADC FDE F LGG+
Sbjct: 750 GYETPSIIKYLEPMTGDLHTARYADCIFDEEHFLALGGD 788
Score = 98.2 bits (243), Expect(2) = e-105
Identities = 49/98 (50%), Positives = 72/98 (73%), Gaps = 1/98 (1%)
Frame = +2
Query: 668 KAKELDWKTS-LNYLDPRTSGSELEVQKIIHLQKIANQLPDAFANSTRVTKSHLPAIDAP 844
+ +E++W S + +DPRTS SELEV++IIH Q +AN+LPDAF + RVT+SH+PAI+AP
Sbjct: 793 ECQEIEWNASTMQSIDPRTSESELEVRRIIHFQNLANELPDAFTDHKRVTRSHIPAINAP 852
Query: 845 IRVEVPKEQDPTPVAVESKSRQKRGRPLGSKDKNPRKK 958
RV+VP + + V S + +KRGRP G++DK P ++
Sbjct: 853 ERVQVPPKVTNSTV---SSNLRKRGRPPGARDKVPPRR 887
>gb|AAU89218.1| integrase core domain containing protein [Oryza sativa Japonica
Group]
Length = 1419
Score = 313 bits (803), Expect(2) = e-105
Identities = 148/219 (67%), Positives = 181/219 (82%)
Frame = +1
Query: 4 GQFRYFMVLIDASTRWSHVCLLSSRNLVFARLLAQIIRLRAQFPDHPIKKIRLDNAAEYC 183
G FRYFMV IDASTRW+HV LLS+RN F++L+AQIIRLRA FPD+ I+ IR+DNA E+
Sbjct: 509 GPFRYFMVFIDASTRWNHVDLLSTRNHGFSKLIAQIIRLRASFPDNRIQSIRMDNAGEFR 568
Query: 184 SHAFDAYCMSIGITIEHPVAYVHTQNGLAESFIKRLQLIARPLLMRTNLPTSAWGHAILH 363
S AFD YC+++GI++EH V +VHTQNGLAES IKR++ IARPLL LPTS WGHA+LH
Sbjct: 569 SKAFDDYCLAMGISVEHSVPHVHTQNGLAESLIKRIKWIARPLLQNCKLPTSCWGHAVLH 628
Query: 364 AAALVRIRPTSYHKFSPLQLASGFEPNISHLRIFGCAVYVPIAPNQRTKMGPQRRLGIYV 543
AAAL+++RPT+YH SP QL G EP+ISHLRIFGCAVYVPI P QRT MG R++G+YV
Sbjct: 629 AAALIQLRPTAYHDTSPSQLVRGKEPSISHLRIFGCAVYVPIPPPQRTSMGHHRKMGVYV 688
Query: 544 GYDSPSIIRYLEPLTGDVFTARFADCHFDESVFPKLGGE 660
GY++PSII+YLEP+TGD+ TAR+ADC FDE F LGG+
Sbjct: 689 GYETPSIIKYLEPMTGDLHTARYADCIFDEEHFLALGGD 727
Score = 98.2 bits (243), Expect(2) = e-105
Identities = 49/98 (50%), Positives = 72/98 (73%), Gaps = 1/98 (1%)
Frame = +2
Query: 668 KAKELDWKTS-LNYLDPRTSGSELEVQKIIHLQKIANQLPDAFANSTRVTKSHLPAIDAP 844
+ +E++W S + +DPRTS SELEV++IIH Q +AN+LPDAF + RVT+SH+PAI+AP
Sbjct: 732 ECQEIEWNASTMQSIDPRTSESELEVRRIIHFQNLANELPDAFTDHKRVTRSHIPAINAP 791
Query: 845 IRVEVPKEQDPTPVAVESKSRQKRGRPLGSKDKNPRKK 958
RV+VP + + V S + +KRGRP G++DK P ++
Sbjct: 792 ERVQVPPKVTNSTV---SSNLRKRGRPPGARDKVPPRR 826