BLASTX nr result

ID: Rauwolfia21_contig00020635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00020635
         (369 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530166.1| conserved hypothetical protein [Ricinus comm...    62   8e-08
ref|XP_002323401.2| hypothetical protein POPTR_0016s07430g [Popu...    61   1e-07
ref|XP_006430106.1| hypothetical protein CICLE_v10013147mg [Citr...    60   4e-07
ref|XP_002309400.2| hypothetical protein POPTR_0006s22230g [Popu...    60   4e-07

>ref|XP_002530166.1| conserved hypothetical protein [Ricinus communis]
           gi|223530327|gb|EEF32221.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 195

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +3

Query: 216 TMSRRRGNVPKLDLKLNLSPPRANPRVQSPSRSET 320
           TMSRR GN PKLDLKLNLSPPRA+PRV+SP+RS T
Sbjct: 86  TMSRRNGNGPKLDLKLNLSPPRADPRVESPNRSAT 120


>ref|XP_002323401.2| hypothetical protein POPTR_0016s07430g [Populus trichocarpa]
           gi|550321046|gb|EEF05162.2| hypothetical protein
           POPTR_0016s07430g [Populus trichocarpa]
          Length = 144

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = +3

Query: 201 KEAAATMSRRRGNVPKLDLKLNLSPPRANPRVQSPSRSET 320
           K   + MSRR G++PKLDLKLNLSPPR NPRV+SP RS T
Sbjct: 24  KNKTSRMSRRNGSLPKLDLKLNLSPPRVNPRVESPGRSAT 63


>ref|XP_006430106.1| hypothetical protein CICLE_v10013147mg [Citrus clementina]
           gi|557532163|gb|ESR43346.1| hypothetical protein
           CICLE_v10013147mg [Citrus clementina]
          Length = 115

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = +3

Query: 219 MSRRRGNVPKLDLKLNLSPPRANPRVQSPSRSET 320
           MSRR GNVPKLDLKLNLSPPR NP ++SPS+S T
Sbjct: 1   MSRRNGNVPKLDLKLNLSPPRGNPHMESPSQSAT 34


>ref|XP_002309400.2| hypothetical protein POPTR_0006s22230g [Populus trichocarpa]
           gi|550336847|gb|EEE92923.2| hypothetical protein
           POPTR_0006s22230g [Populus trichocarpa]
          Length = 113

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = +3

Query: 219 MSRRRGNVPKLDLKLNLSPPRANPRVQSPSRSET 320
           MSRR G++PKLDLKLNLSPPR NPRV+SP RS T
Sbjct: 1   MSRRNGSLPKLDLKLNLSPPRVNPRVESPGRSAT 34


Top