BLASTX nr result

ID: Rauwolfia21_contig00020617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00020617
         (418 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16727.1| unknown [Picea sitchensis]                              55   7e-06
gb|ABK22165.1| unknown [Picea sitchensis]                              55   7e-06
ref|XP_002265743.1| PREDICTED: probable U3 small nucleolar RNA-a...    55   7e-06
emb|CAN82884.1| hypothetical protein VITISV_023155 [Vitis vinifera]    55   7e-06
gb|EMJ13186.1| hypothetical protein PRUPE_ppa010965mg [Prunus pe...    55   1e-05
ref|XP_002517659.1| U3 small nucleolar RNA-associated protein, p...    55   1e-05

>gb|ABR16727.1| unknown [Picea sitchensis]
          Length = 230

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/29 (86%), Positives = 25/29 (86%)
 Frame = +3

Query: 3   KGRKRKLRDDEITSPTSKPVYKWRPERKR 89
           KGRKRKLRDDEI  PTS PVYKWR ERKR
Sbjct: 202 KGRKRKLRDDEIVHPTSGPVYKWRKERKR 230


>gb|ABK22165.1| unknown [Picea sitchensis]
          Length = 230

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/29 (86%), Positives = 25/29 (86%)
 Frame = +3

Query: 3   KGRKRKLRDDEITSPTSKPVYKWRPERKR 89
           KGRKRKLRDDEI  PTS PVYKWR ERKR
Sbjct: 202 KGRKRKLRDDEIVHPTSGPVYKWRKERKR 230


>ref|XP_002265743.1| PREDICTED: probable U3 small nucleolar RNA-associated protein 11
           [Vitis vinifera] gi|239056174|emb|CAQ58608.1| unknown
           gene [Vitis vinifera] gi|239056194|emb|CAQ58632.1|
           unknown protein / putative CGI-94 protein [Vitis
           vinifera] gi|296085811|emb|CBI31135.3| unnamed protein
           product [Vitis vinifera]
          Length = 229

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = +3

Query: 3   KGRKRKLRDDEITSPTSKPVYKWRPERKR 89
           +GRKRKLR+DEI  PTSKPVYKWR ERKR
Sbjct: 201 RGRKRKLREDEIACPTSKPVYKWRAERKR 229


>emb|CAN82884.1| hypothetical protein VITISV_023155 [Vitis vinifera]
          Length = 229

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = +3

Query: 3   KGRKRKLRDDEITSPTSKPVYKWRPERKR 89
           +GRKRKLR+DEI  PTSKPVYKWR ERKR
Sbjct: 201 RGRKRKLREDEIVCPTSKPVYKWRAERKR 229


>gb|EMJ13186.1| hypothetical protein PRUPE_ppa010965mg [Prunus persica]
          Length = 228

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = +3

Query: 3   KGRKRKLRDDEITSPTSKPVYKWRPERKR 89
           KGRKRKLR+DEI  PTSKPV+KWR ERKR
Sbjct: 200 KGRKRKLREDEIVCPTSKPVFKWRAERKR 228


>ref|XP_002517659.1| U3 small nucleolar RNA-associated protein, putative [Ricinus
           communis] gi|223543291|gb|EEF44823.1| U3 small nucleolar
           RNA-associated protein, putative [Ricinus communis]
          Length = 231

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = +3

Query: 3   KGRKRKLRDDEITSPTSKPVYKWRPERKR 89
           KG+KRKLR+DEI  PTSKP+YKWR ERKR
Sbjct: 201 KGKKRKLREDEIVCPTSKPIYKWRSERKR 229


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