BLASTX nr result
ID: Rauwolfia21_contig00020573
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00020573
(895 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subun... 259 1e-66
ref|XP_006356601.1| PREDICTED: cleavage stimulation factor subun... 252 1e-64
ref|XP_006356598.1| PREDICTED: cleavage stimulation factor subun... 252 1e-64
ref|XP_004248745.1| PREDICTED: cleavage stimulation factor subun... 243 5e-62
gb|EOY19418.1| Tetratricopeptide repeat (TPR)-like superfamily p... 243 7e-62
gb|EOY19416.1| Tetratricopeptide repeat-like superfamily protein... 243 7e-62
gb|EOY19419.1| Tetratricopeptide repeat-like superfamily protein... 233 6e-59
gb|EOY19417.1| Tetratricopeptide repeat-like superfamily protein... 233 6e-59
ref|XP_002519397.1| plant RNA cleavage stimulation factor, putat... 233 6e-59
ref|XP_004248746.1| PREDICTED: cleavage stimulation factor subun... 233 7e-59
gb|ESW23484.1| hypothetical protein PHAVU_004G051000g [Phaseolus... 227 4e-57
ref|XP_004165274.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti... 221 2e-55
ref|XP_004144686.1| PREDICTED: cleavage stimulation factor subun... 221 2e-55
ref|XP_002303484.1| suppressor of forked family protein [Populus... 219 1e-54
ref|XP_004489637.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti... 217 5e-54
ref|XP_006429695.1| hypothetical protein CICLE_v10011123mg [Citr... 216 1e-53
ref|XP_006604052.1| PREDICTED: cleavage stimulation factor subun... 213 6e-53
ref|XP_004300057.1| PREDICTED: cleavage stimulation factor subun... 209 1e-51
ref|XP_006481295.1| PREDICTED: cleavage stimulation factor subun... 206 9e-51
ref|XP_003618920.1| mRNA 3'-end-processing protein rna14 [Medica... 205 2e-50
>ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subunit 3 [Vitis vinifera]
gi|297736046|emb|CBI24084.3| unnamed protein product
[Vitis vinifera]
Length = 769
Score = 259 bits (661), Expect = 1e-66
Identities = 139/240 (57%), Positives = 174/240 (72%), Gaps = 17/240 (7%)
Frame = +2
Query: 2 WLSKNINKKIEKPALANGTGSADKNSSGVPTSSSSA-KLVYPDTSRMAIYDPRQKIGV-- 172
WL+KNINKK+EK A+ G GS +K++SG T+S+ A K+ YPDTS+M +YDPRQK G
Sbjct: 532 WLAKNINKKVEKSAILKGVGSTEKSASGFTTNSNPATKVFYPDTSQMVVYDPRQKPGTGA 591
Query: 173 ----TGPVQPGIS-IMPSSNVTLGGAGASNALNDILKTLPPALAAFVANLPAVEGPSPEV 337
T PV P IS + + +V + + +N L++ILK+ PPAL AF+ANLPAVEGPSP+V
Sbjct: 592 LPSTTAPVLPSISGTLSNPSVPMVSSRPANPLDEILKSTPPALVAFIANLPAVEGPSPDV 651
Query: 338 DFVISVCLQSNIPLATGKAVPPTQKQAGPAPSTSDLSGSAK---------LKPKRDRHVG 490
D V+S+CLQSN+ +TG+ TQ AGP PSTSDLSGS+K KP RDR G
Sbjct: 652 DVVLSICLQSNV--STGQTGLSTQLAAGPVPSTSDLSGSSKSHPVPSGSSFKPMRDRQPG 709
Query: 491 KRKDLERQDDDDTATVQSQSLPRDVFKLRQLQKTRASASHTTGSASYGSAFSGELSGSTG 670
KRKDL+RQ+DD+TAT QS LPRDVFK+RQ++K R + TGSASYGSAFSGELSGSTG
Sbjct: 710 KRKDLDRQEDDETATAQSLPLPRDVFKIRQIRKARGGTTSQTGSASYGSAFSGELSGSTG 769
>ref|XP_006356601.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X4
[Solanum tuberosum]
Length = 601
Score = 252 bits (644), Expect = 1e-64
Identities = 137/229 (59%), Positives = 165/229 (72%), Gaps = 7/229 (3%)
Frame = +2
Query: 2 WLSKNINKKIEKPALANGTGSADKNSSGVPTSSSS-AKLVYPDTSRMAIYDPRQKIGVTG 178
WL++NINKK +KP L GSADK +SGV ++++ AK+VYPDTS+M +YDPRQ G
Sbjct: 373 WLARNINKKPDKPTLGIEAGSADKTTSGVSSNTNPPAKVVYPDTSKMTVYDPRQIPGPAA 432
Query: 179 PVQPGISIMPSSNVTLGGAGASNALNDILKTLPPALAAFVANLPAVEGPSPEVDFVISVC 358
P S + G NALNDILK+LPPA AAF+ANLPAVEGPSP+ DFVISVC
Sbjct: 433 LAAPSASGTLPYSGPFSSNGPPNALNDILKSLPPAFAAFIANLPAVEGPSPDADFVISVC 492
Query: 359 LQSNIPLATGKA-VPPTQKQAGPAPSTSDLSGSAKLKPKRDRHVGKRKDLERQDDDDTAT 535
LQSNIP ATGK+ Q+G APSTSDLS S+K +P RDR GKRKD++RQ+DD++ T
Sbjct: 493 LQSNIPAATGKSGTASLPLQSGAAPSTSDLSDSSKFRP-RDRQPGKRKDMDRQEDDESTT 551
Query: 536 VQSQSLPRDVFKLRQLQKTRAS-----ASHTTGSASYGSAFSGELSGST 667
+QSQ LPRD+FK+RQLQK R S TGSASYGSA SG+LSGST
Sbjct: 552 IQSQPLPRDLFKIRQLQKNRVGNSSRVTSSYTGSASYGSALSGDLSGST 600
>ref|XP_006356598.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X1
[Solanum tuberosum] gi|565380421|ref|XP_006356599.1|
PREDICTED: cleavage stimulation factor subunit 3-like
isoform X2 [Solanum tuberosum]
gi|565380423|ref|XP_006356600.1| PREDICTED: cleavage
stimulation factor subunit 3-like isoform X3 [Solanum
tuberosum]
Length = 741
Score = 252 bits (644), Expect = 1e-64
Identities = 137/229 (59%), Positives = 165/229 (72%), Gaps = 7/229 (3%)
Frame = +2
Query: 2 WLSKNINKKIEKPALANGTGSADKNSSGVPTSSSS-AKLVYPDTSRMAIYDPRQKIGVTG 178
WL++NINKK +KP L GSADK +SGV ++++ AK+VYPDTS+M +YDPRQ G
Sbjct: 513 WLARNINKKPDKPTLGIEAGSADKTTSGVSSNTNPPAKVVYPDTSKMTVYDPRQIPGPAA 572
Query: 179 PVQPGISIMPSSNVTLGGAGASNALNDILKTLPPALAAFVANLPAVEGPSPEVDFVISVC 358
P S + G NALNDILK+LPPA AAF+ANLPAVEGPSP+ DFVISVC
Sbjct: 573 LAAPSASGTLPYSGPFSSNGPPNALNDILKSLPPAFAAFIANLPAVEGPSPDADFVISVC 632
Query: 359 LQSNIPLATGKA-VPPTQKQAGPAPSTSDLSGSAKLKPKRDRHVGKRKDLERQDDDDTAT 535
LQSNIP ATGK+ Q+G APSTSDLS S+K +P RDR GKRKD++RQ+DD++ T
Sbjct: 633 LQSNIPAATGKSGTASLPLQSGAAPSTSDLSDSSKFRP-RDRQPGKRKDMDRQEDDESTT 691
Query: 536 VQSQSLPRDVFKLRQLQKTRAS-----ASHTTGSASYGSAFSGELSGST 667
+QSQ LPRD+FK+RQLQK R S TGSASYGSA SG+LSGST
Sbjct: 692 IQSQPLPRDLFKIRQLQKNRVGNSSRVTSSYTGSASYGSALSGDLSGST 740
>ref|XP_004248745.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform 1
[Solanum lycopersicum]
Length = 741
Score = 243 bits (621), Expect = 5e-62
Identities = 135/229 (58%), Positives = 162/229 (70%), Gaps = 7/229 (3%)
Frame = +2
Query: 2 WLSKNINKKIEKPALANGTGSADKNSSGVPTSSSS-AKLVYPDTSRMAIYDPRQKIGVTG 178
WL++NINKK +KP L GSADK +SGV ++++ AK+VYPDTS+M +YDPRQ G
Sbjct: 513 WLARNINKKPDKPTLGIEAGSADKTTSGVSSNTNPPAKVVYPDTSKMTVYDPRQIPGPAA 572
Query: 179 PVQPGISIMPSSNVTLGGAGASNALNDILKTLPPALAAFVANLPAVEGPSPEVDFVISVC 358
P S + G ALNDILK+LPPA AAFVANLPAVEGPSP+ DFVISVC
Sbjct: 573 LAAPSASGTLPYSGPFSSNGPPIALNDILKSLPPAFAAFVANLPAVEGPSPDADFVISVC 632
Query: 359 LQSNIPLATGKA-VPPTQKQAGPAPSTSDLSGSAKLKPKRDRHVGKRKDLERQDDDDTAT 535
LQSNIP ATGK+ +G APSTSDLS S+K +P RDR GKRKD++R +DD++ T
Sbjct: 633 LQSNIPAATGKSGTASLPLLSGAAPSTSDLSDSSKFRP-RDRQPGKRKDMDRPEDDESTT 691
Query: 536 VQSQSLPRDVFKLRQLQKTRAS-----ASHTTGSASYGSAFSGELSGST 667
+QSQ LPRD+FK+RQLQK R S TGSASYGSA SG+LSGST
Sbjct: 692 MQSQPLPRDLFKIRQLQKNRVGNSSRVTSSYTGSASYGSALSGDLSGST 740
>gb|EOY19418.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 3
[Theobroma cacao]
Length = 755
Score = 243 bits (620), Expect = 7e-62
Identities = 130/241 (53%), Positives = 170/241 (70%), Gaps = 19/241 (7%)
Frame = +2
Query: 2 WLSKNINKKIEKPALANGTGSADKNSSGVPTSSSSA--KLVYPDTSRMAIYDPRQKIGVT 175
WL+KNI KK+EK A +NG+ + DKN S PTS+S+A K++YPD S+M +YDPRQ G
Sbjct: 515 WLAKNIGKKVEKSAFSNGSVTIDKNPSA-PTSNSTASVKVLYPDISQMVVYDPRQHSGTA 573
Query: 176 GP---VQPGI--SIMPSSNVTLGG--AGASNALNDILKTLPPALAAFVANLPAVEGPSPE 334
P P I + P SN T+ +G++NA +++LK PPAL AF+ NLPA+EGP P
Sbjct: 574 APPNTTAPAILAASNPLSNPTISAVDSGSANAFDEVLKATPPALVAFLTNLPALEGPKPN 633
Query: 335 VDFVISVCLQSNIPLATGKAVP--PTQKQAGPAPSTSDLSGSAKLKP--------KRDRH 484
VD V+S+CLQS++P K + P+Q+ GPAPSTSDLSGS+K P RDRH
Sbjct: 634 VDIVLSICLQSDLPTGQTKKLTALPSQRTTGPAPSTSDLSGSSKSHPIPSSSSFRPRDRH 693
Query: 485 VGKRKDLERQDDDDTATVQSQSLPRDVFKLRQLQKTRASASHTTGSASYGSAFSGELSGS 664
+GKRKDL+RQ++D+T TVQSQ LPRDVF++RQ+QK R ++ TGS SYGSA SG+LSGS
Sbjct: 694 LGKRKDLDRQEEDETTTVQSQPLPRDVFRIRQIQKARGGSASQTGSVSYGSALSGDLSGS 753
Query: 665 T 667
T
Sbjct: 754 T 754
>gb|EOY19416.1| Tetratricopeptide repeat-like superfamily protein isoform 1
[Theobroma cacao]
Length = 761
Score = 243 bits (620), Expect = 7e-62
Identities = 130/241 (53%), Positives = 170/241 (70%), Gaps = 19/241 (7%)
Frame = +2
Query: 2 WLSKNINKKIEKPALANGTGSADKNSSGVPTSSSSA--KLVYPDTSRMAIYDPRQKIGVT 175
WL+KNI KK+EK A +NG+ + DKN S PTS+S+A K++YPD S+M +YDPRQ G
Sbjct: 521 WLAKNIGKKVEKSAFSNGSVTIDKNPSA-PTSNSTASVKVLYPDISQMVVYDPRQHSGTA 579
Query: 176 GP---VQPGI--SIMPSSNVTLGG--AGASNALNDILKTLPPALAAFVANLPAVEGPSPE 334
P P I + P SN T+ +G++NA +++LK PPAL AF+ NLPA+EGP P
Sbjct: 580 APPNTTAPAILAASNPLSNPTISAVDSGSANAFDEVLKATPPALVAFLTNLPALEGPKPN 639
Query: 335 VDFVISVCLQSNIPLATGKAVP--PTQKQAGPAPSTSDLSGSAKLKP--------KRDRH 484
VD V+S+CLQS++P K + P+Q+ GPAPSTSDLSGS+K P RDRH
Sbjct: 640 VDIVLSICLQSDLPTGQTKKLTALPSQRTTGPAPSTSDLSGSSKSHPIPSSSSFRPRDRH 699
Query: 485 VGKRKDLERQDDDDTATVQSQSLPRDVFKLRQLQKTRASASHTTGSASYGSAFSGELSGS 664
+GKRKDL+RQ++D+T TVQSQ LPRDVF++RQ+QK R ++ TGS SYGSA SG+LSGS
Sbjct: 700 LGKRKDLDRQEEDETTTVQSQPLPRDVFRIRQIQKARGGSASQTGSVSYGSALSGDLSGS 759
Query: 665 T 667
T
Sbjct: 760 T 760
>gb|EOY19419.1| Tetratricopeptide repeat-like superfamily protein isoform 4
[Theobroma cacao]
Length = 657
Score = 233 bits (595), Expect = 6e-59
Identities = 129/249 (51%), Positives = 169/249 (67%), Gaps = 27/249 (10%)
Frame = +2
Query: 2 WLSKNINKKIEKPALANGTGSADKNSSGVPTSSSSA--KLVYPDTSRMAIYDPRQKIGVT 175
WL+KNI KK+EK A +NG+ + DKN S PTS+S+A K++YPD S+M +YDPRQ G
Sbjct: 409 WLAKNIGKKVEKSAFSNGSVTIDKNPSA-PTSNSTASVKVLYPDISQMVVYDPRQHSGTA 467
Query: 176 GP---VQPGI--SIMPSSNVTLGG--AGASNALNDILKTLPPALAAFVANLPAVEGPSPE 334
P P I + P SN T+ +G++NA +++LK PPAL AF+ NLPA+EGP P
Sbjct: 468 APPNTTAPAILAASNPLSNPTISAVDSGSANAFDEVLKATPPALVAFLTNLPALEGPKPN 527
Query: 335 VDFVISVCLQSNIPLATGKAVP--PTQKQAGPAPSTSDLSGSAKLKP--------KRDRH 484
VD V+S+CLQS++P K + P+Q+ GPAPSTSDLSGS+K P RDRH
Sbjct: 528 VDIVLSICLQSDLPTGQTKKLTALPSQRTTGPAPSTSDLSGSSKSHPIPSSSSFRPRDRH 587
Query: 485 VGKRKDLER--------QDDDDTATVQSQSLPRDVFKLRQLQKTRASASHTTGSASYGSA 640
+GKRKDL+ Q++D+T TVQSQ LPRDVF++RQ+QK R ++ TGS SYGSA
Sbjct: 588 LGKRKDLDSKFPAVFMGQEEDETTTVQSQPLPRDVFRIRQIQKARGGSASQTGSVSYGSA 647
Query: 641 FSGELSGST 667
SG+LSGST
Sbjct: 648 LSGDLSGST 656
>gb|EOY19417.1| Tetratricopeptide repeat-like superfamily protein isoform 2
[Theobroma cacao]
Length = 717
Score = 233 bits (595), Expect = 6e-59
Identities = 129/249 (51%), Positives = 169/249 (67%), Gaps = 27/249 (10%)
Frame = +2
Query: 2 WLSKNINKKIEKPALANGTGSADKNSSGVPTSSSSA--KLVYPDTSRMAIYDPRQKIGVT 175
WL+KNI KK+EK A +NG+ + DKN S PTS+S+A K++YPD S+M +YDPRQ G
Sbjct: 469 WLAKNIGKKVEKSAFSNGSVTIDKNPSA-PTSNSTASVKVLYPDISQMVVYDPRQHSGTA 527
Query: 176 GP---VQPGI--SIMPSSNVTLGG--AGASNALNDILKTLPPALAAFVANLPAVEGPSPE 334
P P I + P SN T+ +G++NA +++LK PPAL AF+ NLPA+EGP P
Sbjct: 528 APPNTTAPAILAASNPLSNPTISAVDSGSANAFDEVLKATPPALVAFLTNLPALEGPKPN 587
Query: 335 VDFVISVCLQSNIPLATGKAVP--PTQKQAGPAPSTSDLSGSAKLKP--------KRDRH 484
VD V+S+CLQS++P K + P+Q+ GPAPSTSDLSGS+K P RDRH
Sbjct: 588 VDIVLSICLQSDLPTGQTKKLTALPSQRTTGPAPSTSDLSGSSKSHPIPSSSSFRPRDRH 647
Query: 485 VGKRKDLER--------QDDDDTATVQSQSLPRDVFKLRQLQKTRASASHTTGSASYGSA 640
+GKRKDL+ Q++D+T TVQSQ LPRDVF++RQ+QK R ++ TGS SYGSA
Sbjct: 648 LGKRKDLDSKFPAVFMGQEEDETTTVQSQPLPRDVFRIRQIQKARGGSASQTGSVSYGSA 707
Query: 641 FSGELSGST 667
SG+LSGST
Sbjct: 708 LSGDLSGST 716
>ref|XP_002519397.1| plant RNA cleavage stimulation factor, putative [Ricinus communis]
gi|223541464|gb|EEF43014.1| plant RNA cleavage
stimulation factor, putative [Ricinus communis]
Length = 767
Score = 233 bits (595), Expect = 6e-59
Identities = 130/239 (54%), Positives = 170/239 (71%), Gaps = 17/239 (7%)
Frame = +2
Query: 2 WLSKNINKKIEKPALANGTGSADKNSSGVPTSSS-SAKLVYPDTSRMAIYDPRQK--IGV 172
WL+KNI+KK+EK ++NG G D+ S+G+ ++S+ SAK++YPDTS MAIY+PRQK +G+
Sbjct: 533 WLAKNISKKMEKSTISNGLGILDRVSTGLKSNSAVSAKVIYPDTSSMAIYEPRQKHEVGI 592
Query: 173 ---TGPVQPGISIMPSSNVTLGGAGA-SNALNDILKTLPPALAAFVANLPAVEGPSPEVD 340
T G + PSSN +G G+ +NA ++ILK PPAL +F++ LP VEGP+P VD
Sbjct: 593 SLSTTATGFGSASNPSSNTIVGLVGSGANAFDEILKATPPALISFLSTLPTVEGPTPNVD 652
Query: 341 FVISVCLQSNIP------LATGKAVPPTQKQAGPAPSTSDLSGSAK----LKPKRDRHVG 490
V+S+CLQS + L T AVP A PAP+TSDLSGS+K LKP RDR G
Sbjct: 653 IVLSICLQSELTNGQMGKLGTSPAVP-----APPAPATSDLSGSSKSRPVLKPSRDRQSG 707
Query: 491 KRKDLERQDDDDTATVQSQSLPRDVFKLRQLQKTRASASHTTGSASYGSAFSGELSGST 667
KRKD+ERQ++D+TATVQSQ LPRD+F++R QK R + TGSASYGSA SG+LSGST
Sbjct: 708 KRKDIERQEEDETATVQSQPLPRDIFRIRHSQKARVGTASQTGSASYGSALSGDLSGST 766
>ref|XP_004248746.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform 2
[Solanum lycopersicum]
Length = 734
Score = 233 bits (594), Expect = 7e-59
Identities = 132/229 (57%), Positives = 159/229 (69%), Gaps = 7/229 (3%)
Frame = +2
Query: 2 WLSKNINKKIEKPALANGTGSADKNSSGVPTSSSS-AKLVYPDTSRMAIYDPRQKIGVTG 178
WL++NINKK +KP L DK +SGV ++++ AK+VYPDTS+M +YDPRQ G
Sbjct: 513 WLARNINKKPDKPTL-------DKTTSGVSSNTNPPAKVVYPDTSKMTVYDPRQIPGPAA 565
Query: 179 PVQPGISIMPSSNVTLGGAGASNALNDILKTLPPALAAFVANLPAVEGPSPEVDFVISVC 358
P S + G ALNDILK+LPPA AAFVANLPAVEGPSP+ DFVISVC
Sbjct: 566 LAAPSASGTLPYSGPFSSNGPPIALNDILKSLPPAFAAFVANLPAVEGPSPDADFVISVC 625
Query: 359 LQSNIPLATGKA-VPPTQKQAGPAPSTSDLSGSAKLKPKRDRHVGKRKDLERQDDDDTAT 535
LQSNIP ATGK+ +G APSTSDLS S+K +P RDR GKRKD++R +DD++ T
Sbjct: 626 LQSNIPAATGKSGTASLPLLSGAAPSTSDLSDSSKFRP-RDRQPGKRKDMDRPEDDESTT 684
Query: 536 VQSQSLPRDVFKLRQLQKTRAS-----ASHTTGSASYGSAFSGELSGST 667
+QSQ LPRD+FK+RQLQK R S TGSASYGSA SG+LSGST
Sbjct: 685 MQSQPLPRDLFKIRQLQKNRVGNSSRVTSSYTGSASYGSALSGDLSGST 733
>gb|ESW23484.1| hypothetical protein PHAVU_004G051000g [Phaseolus vulgaris]
Length = 738
Score = 227 bits (579), Expect = 4e-57
Identities = 130/244 (53%), Positives = 159/244 (65%), Gaps = 21/244 (8%)
Frame = +2
Query: 2 WLSKNINKKIEKPALANGTGSADKNSSGVPTSSSSAKLVYPDTSRMAIYDPRQKIGVTGP 181
WL+KNINK++EK LANGT DK S SS+S K+VYPDTS+M IYDP+ VTG
Sbjct: 516 WLTKNINKRVEKCILANGTIVIDKTSMS-NISSTSPKIVYPDTSKMVIYDPKHT-PVTG- 572
Query: 182 VQPGISIMPSSNVTLGGAGASNALNDILKTLPPALAAFVANLPAVEGPSPEVDFVISVCL 361
+NA ++ILK PPAL AF+ANLPAVEGP+P VD V+S+CL
Sbjct: 573 ------------------SGTNAFDEILKATPPALVAFLANLPAVEGPTPNVDIVLSICL 614
Query: 362 QSNIP------------LATGKAVPPTQKQAGPAPSTSDLSGSAK---------LKPKRD 478
QS++P + TGK P+Q AG AP+TS+LSGS+K LKP +
Sbjct: 615 QSDLPTGQSAKIGISTQVQTGKGGIPSQLPAGSAPATSELSGSSKSHPVPSGVSLKPGSN 674
Query: 479 RHVGKRKDLERQDDDDTATVQSQSLPRDVFKLRQLQKTRASASHTTGSASYGSAFSGELS 658
R GKRK+ ERQ+DDDT TVQSQ LPRD F++RQ QK RAS++ TGS SYGSAFSG+LS
Sbjct: 675 RQYGKRKESERQEDDDTTTVQSQPLPRDAFRIRQYQKARASSASQTGSVSYGSAFSGDLS 734
Query: 659 GSTG 670
GSTG
Sbjct: 735 GSTG 738
>ref|XP_004165274.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
3-like [Cucumis sativus]
Length = 460
Score = 221 bits (564), Expect = 2e-55
Identities = 117/235 (49%), Positives = 157/235 (66%), Gaps = 12/235 (5%)
Frame = +2
Query: 2 WLSKNINKKIEKPALANGTGSADKNSSGVPTSS-SSAKLVYPDTSRMAIYDPRQKIGVTG 178
WL+KNI+K EK +L GTG D S+G + S S K+VYPDTS+M IYDP Q +G+
Sbjct: 226 WLAKNISKNSEKSSLPGGTGFLDTGSAGFMSHSIPSTKVVYPDTSQMVIYDPSQILGILP 285
Query: 179 PVQP-GISIMPSSNVTLGGAGASNALNDILKTLPPALAAFVANLPAVEGPSPEVDFVISV 355
G+ PS+ V++ ++ ++ILK P AL AF+ANLPAV+GP+P+VD V+SV
Sbjct: 286 TATASGLPANPSNPVSVASGAPTSVFDEILKATPAALIAFLANLPAVDGPTPDVDIVLSV 345
Query: 356 CLQSNIPLA--TGKAVPPTQKQAGPAPSTSDLSGSAK--------LKPKRDRHVGKRKDL 505
CL+S++P P Q GP P+TSDLSGS+K LK RD+ GKRKD
Sbjct: 346 CLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKDY 405
Query: 506 ERQDDDDTATVQSQSLPRDVFKLRQLQKTRASASHTTGSASYGSAFSGELSGSTG 670
+RQ+D+++ TVQSQ +P+D F++RQ+QK R + S TGSASYGSA SG+LSGSTG
Sbjct: 406 DRQEDNESTTVQSQPMPKDXFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG 460
>ref|XP_004144686.1| PREDICTED: cleavage stimulation factor subunit 3-like [Cucumis
sativus]
Length = 871
Score = 221 bits (564), Expect = 2e-55
Identities = 117/235 (49%), Positives = 157/235 (66%), Gaps = 12/235 (5%)
Frame = +2
Query: 2 WLSKNINKKIEKPALANGTGSADKNSSGVPTSS-SSAKLVYPDTSRMAIYDPRQKIGVTG 178
WL+KNI+K EK +L GTG D S+G + S S K+VYPDTS+M IYDP Q +G+
Sbjct: 637 WLAKNISKNSEKSSLPGGTGFLDTGSAGFMSHSIPSTKVVYPDTSQMVIYDPSQILGILP 696
Query: 179 PVQP-GISIMPSSNVTLGGAGASNALNDILKTLPPALAAFVANLPAVEGPSPEVDFVISV 355
G+ PS+ V++ ++ ++ILK P AL AF+ANLPAV+GP+P+VD V+SV
Sbjct: 697 TATASGLPANPSNPVSVASGAPTSVFDEILKATPAALIAFLANLPAVDGPTPDVDIVLSV 756
Query: 356 CLQSNIPLA--TGKAVPPTQKQAGPAPSTSDLSGSAK--------LKPKRDRHVGKRKDL 505
CL+S++P P Q GP P+TSDLSGS+K LK RD+ GKRKD
Sbjct: 757 CLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKDY 816
Query: 506 ERQDDDDTATVQSQSLPRDVFKLRQLQKTRASASHTTGSASYGSAFSGELSGSTG 670
+RQ+D+++ TVQSQ +P+D F++RQ+QK R + S TGSASYGSA SG+LSGSTG
Sbjct: 817 DRQEDNESTTVQSQPMPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG 871
>ref|XP_002303484.1| suppressor of forked family protein [Populus trichocarpa]
gi|222840916|gb|EEE78463.1| suppressor of forked family
protein [Populus trichocarpa]
Length = 769
Score = 219 bits (557), Expect = 1e-54
Identities = 123/235 (52%), Positives = 165/235 (70%), Gaps = 13/235 (5%)
Frame = +2
Query: 2 WLSKNINKKIEKPALANGTGSADKNSSGVPTSSS-SAKLVYPDTSRMAIYDPRQKIGVTG 178
WL+KNINKK EK A++NG + DK +G+ ++S+ S K++YPDTS+ IYDPRQK+
Sbjct: 535 WLAKNINKKAEKSAVSNGPATLDKIPAGLASNSNVSGKVIYPDTSQTVIYDPRQKLEAGI 594
Query: 179 PVQPGIS-IMPSSNVTLGGAG-ASNALNDILKTLPPALAAFVANLPAVEGPSPEVDFVIS 352
P S +SN G A N +++LK PPAL +F+ANLP VEGP+P VD V+S
Sbjct: 595 PPSTTASGFKAASNPLSNPIGLAPNVFDEVLKATPPALISFLANLPVVEGPAPNVDIVLS 654
Query: 353 VCLQSNIPLA-TGKAVPPTQKQAGPAPSTSDLSGSAKLKP--------KRDRHVGKRKDL 505
+CLQS++P+ TGK+ TQ P+TSDLSGS++ +P RDR GKRKD
Sbjct: 655 ICLQSDVPVGKTGKS-GTTQTPMLSGPATSDLSGSSRSRPVPSGSSFKTRDRQSGKRKDR 713
Query: 506 ERQDDDDTATVQSQSLPRDVFKLRQLQKTRASASHT-TGSASYGSAFSGELSGST 667
+RQ++D+TATVQSQ LPRDVF++RQ+QK+RA+A+ + TGS SYGSA SG+LSGST
Sbjct: 714 DRQEEDETATVQSQPLPRDVFRIRQIQKSRAAATTSQTGSVSYGSALSGDLSGST 768
>ref|XP_004489637.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
3-like [Cicer arietinum]
Length = 755
Score = 217 bits (552), Expect = 5e-54
Identities = 118/234 (50%), Positives = 150/234 (64%), Gaps = 11/234 (4%)
Frame = +2
Query: 2 WLSKNINKKIEKPALANGTGSADKNSSGVPTSSSSAKLVYPDTSRMAIYDPRQKIGVTGP 181
WL+KNINKK+EK + NGT DK S S+ S+K+VYPDTS+M +YDP+ G
Sbjct: 543 WLAKNINKKVEKSLVLNGTTFIDKGSIA-SISTISSKVVYPDTSKMVVYDPKHNPGT--- 598
Query: 182 VQPGISIMPSSNVTLGGAGASNALNDILKTLPPALAAFVANLPAVEGPSPEVDFVISVCL 361
GAG +NA ++ILK PPAL AF+ANLPAVEGP+P VD V+S+CL
Sbjct: 599 ----------------GAG-TNAFDEILKATPPALVAFLANLPAVEGPTPNVDIVLSICL 641
Query: 362 QSNIPLATGKAVPPTQKQAGPAPSTSDLSGSAKL-----------KPKRDRHVGKRKDLE 508
QS++P+ +P AP+TS+LSGS+K KP + GKRK+L+
Sbjct: 642 QSDLPIGGKTGIPSQLPVGAAAPATSELSGSSKSHSHPVQTGLSHKPTNRQQYGKRKELD 701
Query: 509 RQDDDDTATVQSQSLPRDVFKLRQLQKTRASASHTTGSASYGSAFSGELSGSTG 670
RQ+DDDT TVQSQ LPRD F++RQ QK RA ++ TGS SYGSA SG+LSGSTG
Sbjct: 702 RQEDDDTTTVQSQPLPRDAFRIRQYQKARAGSTSQTGSVSYGSALSGDLSGSTG 755
>ref|XP_006429695.1| hypothetical protein CICLE_v10011123mg [Citrus clementina]
gi|568855400|ref|XP_006481294.1| PREDICTED: cleavage
stimulation factor subunit 3-like isoform X1 [Citrus
sinensis] gi|557531752|gb|ESR42935.1| hypothetical
protein CICLE_v10011123mg [Citrus clementina]
Length = 770
Score = 216 bits (549), Expect = 1e-53
Identities = 126/251 (50%), Positives = 157/251 (62%), Gaps = 28/251 (11%)
Frame = +2
Query: 2 WLSKNINKKIEKPALANGTGSADKNSSGVPTSSS-SAKLVYPDTSRMAIYDPRQKIGVTG 178
WL KNINKK++K AL+NG G DK SG+ ++S+ SA ++YPDTS+M IYDPRQK
Sbjct: 529 WLVKNINKKVDKSALSNGPGIVDKGPSGLTSNSTTSATVIYPDTSQMVIYDPRQK----- 583
Query: 179 PVQPGISIMPSSNVT---------------LGGAGASNALNDILKTLPPALAAFVANLPA 313
PGI I PS+ T GG G N +++LK PA+ AF+ANLPA
Sbjct: 584 ---PGIGISPSTTATGASSALNALSNPMVATGGGGIMNPFDEMLKAASPAIFAFLANLPA 640
Query: 314 VEGPSPEVDFVISVCLQSNIPLATGKAVP---PTQKQAGPAPSTSDLSGSAK-------- 460
VEGP+P VD V+S+CLQS+IP P PT G A S S +SGS K
Sbjct: 641 VEGPTPNVDIVLSICLQSDIPTGQMGKSPTTYPTPIPTGAARSASGISGSNKSHPTPSGS 700
Query: 461 -LKPKRDRHVGKRKDLERQDDDDTATVQSQSLPRDVFKLRQLQKTRASASHTTGSASYGS 637
LK +D+ KRKD+ QDDD+T TVQSQ PRD F++RQ++K R +AS TGSASYGS
Sbjct: 701 SLKQSKDKQSLKRKDIG-QDDDETTTVQSQPQPRDFFRIRQMKKARGAASSQTGSASYGS 759
Query: 638 AFSGELSGSTG 670
A SG+LSGSTG
Sbjct: 760 AVSGDLSGSTG 770
>ref|XP_006604052.1| PREDICTED: cleavage stimulation factor subunit 3-like [Glycine max]
Length = 739
Score = 213 bits (543), Expect = 6e-53
Identities = 124/249 (49%), Positives = 155/249 (62%), Gaps = 26/249 (10%)
Frame = +2
Query: 2 WLSKNINKKIEKPALANGTGSADKNSSGVPTSSSSAKLVYPDTSRMAIYDPRQKIGVTGP 181
WL+KNINKK+EK L NGT DK S S+ +K+VYPDTS+M IYDP+ G
Sbjct: 516 WLAKNINKKVEKSILPNGTTLLDKTSMA-SISTMPSKIVYPDTSKMVIYDPKHTPGA--- 571
Query: 182 VQPGISIMPSSNVTLGGAGASNALNDILKTLPPALAAFVANLPAVEGPSPEVDFVISVCL 361
+NA ++ILK PPAL +F+ANLPAVEGP P VD V+S+CL
Sbjct: 572 -------------------GTNAFDEILKATPPALVSFLANLPAVEGPMPNVDIVLSICL 612
Query: 362 QSNIPLATGKAVP---PTQKQAG-------------PAPSTSDLSGSAK----------L 463
QS++P TG++V PTQ Q+G PA + S+LSGS+K L
Sbjct: 613 QSDLP--TGQSVKTGIPTQVQSGKAGIPALLPAGSAPAAAASELSGSSKSHPAPSGGVSL 670
Query: 464 KPKRDRHVGKRKDLERQDDDDTATVQSQSLPRDVFKLRQLQKTRASASHTTGSASYGSAF 643
KP +R GKRK+ +RQD+DDT TVQSQ LPRD F++RQ QK RAS++ TGS SYGSAF
Sbjct: 671 KPGSNRQYGKRKEPDRQDEDDTTTVQSQPLPRDAFRIRQYQKARASSASQTGSVSYGSAF 730
Query: 644 SGELSGSTG 670
SG+LSGSTG
Sbjct: 731 SGDLSGSTG 739
>ref|XP_004300057.1| PREDICTED: cleavage stimulation factor subunit 3-like [Fragaria vesca
subsp. vesca]
Length = 762
Score = 209 bits (531), Expect = 1e-51
Identities = 123/240 (51%), Positives = 160/240 (66%), Gaps = 17/240 (7%)
Frame = +2
Query: 2 WLSKNINKKIEKPALANGTGSADKNSSGVPTSSS-SAKLVYPDTSRMAIYDPRQKIGVTG 178
WL+KNINKK EK + +G+ ADK S+G+ ++SS SAK+VYPDT++M IYDPRQK GV G
Sbjct: 529 WLAKNINKKAEKSTMLSGSELADKGSTGLISNSSVSAKVVYPDTNQMVIYDPRQKPGVAG 588
Query: 179 PVQPGISIMPSSNVTLGGAGASNALNDILKTLPPALAAFVANLPAVEGPSPEVDFVISVC 358
V S + + V G +A ++ILK PPAL AF+ANLP +EGP+P+VD V+S+C
Sbjct: 589 -VLTAASTLSNPVVAAVGGQTMSAFDEILKVTPPALVAFLANLPIIEGPTPDVDIVLSIC 647
Query: 359 LQSNIPL--ATGKAVPPTQKQAGPAPSTSDLSGSAK---------LKPKRDRHVGKRKDL 505
LQS+IP Q + PAPSTSDLS S+K KP R GKRK++
Sbjct: 648 LQSDIPAPQPVKSGTAHVQFPSVPAPSTSDLSVSSKSHPIPSGSSFKPTR----GKRKNI 703
Query: 506 ERQDDDDTATVQSQSLPRDVFKLRQLQKTRASASHT-----TGSASYGSAFSGELSGSTG 670
+R+D+D+T TVQSQ LP D F++RQ+Q+ SAS + TGS SYGSA SG+LSGSTG
Sbjct: 704 DRKDEDET-TVQSQPLPTDAFRIRQIQRASRSASASRTASQTGSVSYGSAISGDLSGSTG 762
>ref|XP_006481295.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X2
[Citrus sinensis]
Length = 743
Score = 206 bits (524), Expect = 9e-51
Identities = 119/236 (50%), Positives = 149/236 (63%), Gaps = 13/236 (5%)
Frame = +2
Query: 2 WLSKNINKKIEKPALANGTGSADKNSSGVPTSSS-SAKLVYPDTSRMAIYDPRQKIGVTG 178
WL KNINKK++K AL+NG G DK SG+ ++S+ SA ++YPDTS+M IYDPRQK G
Sbjct: 529 WLVKNINKKVDKSALSNGPGIVDKGPSGLTSNSTTSATVIYPDTSQMVIYDPRQKPG--- 585
Query: 179 PVQPGISIMPSSNVTLGGAGASNALNDILKTLPPALAAFVANLPAVEGPSPEVDFVISVC 358
G G N +++LK PA+ AF+ANLPAVEGP+P VD V+S+C
Sbjct: 586 -----------------GGGIMNPFDEMLKAASPAIFAFLANLPAVEGPTPNVDIVLSIC 628
Query: 359 LQSNIPLATGKAVP---PTQKQAGPAPSTSDLSGSAK---------LKPKRDRHVGKRKD 502
LQS+IP P PT G A S S +SGS K LK +D+ KRKD
Sbjct: 629 LQSDIPTGQMGKSPTTYPTPIPTGAARSASGISGSNKSHPTPSGSSLKQSKDKQSLKRKD 688
Query: 503 LERQDDDDTATVQSQSLPRDVFKLRQLQKTRASASHTTGSASYGSAFSGELSGSTG 670
+ QDDD+T TVQSQ PRD F++RQ++K R +AS TGSASYGSA SG+LSGSTG
Sbjct: 689 IG-QDDDETTTVQSQPQPRDFFRIRQMKKARGAASSQTGSASYGSAVSGDLSGSTG 743
>ref|XP_003618920.1| mRNA 3'-end-processing protein rna14 [Medicago truncatula]
gi|355493935|gb|AES75138.1| mRNA 3'-end-processing
protein rna14 [Medicago truncatula]
Length = 737
Score = 205 bits (522), Expect = 2e-50
Identities = 115/235 (48%), Positives = 152/235 (64%), Gaps = 12/235 (5%)
Frame = +2
Query: 2 WLSKNINKKIEKPALANGTGSADKNSSGVPTSSSSAKLVYPDTSRMAIYDPRQKIGVTGP 181
WL KN KK+EK + NGT DK S++S+K+VYPDTS+M IYDP+ G
Sbjct: 526 WLVKN-TKKVEKSIMLNGTTFIDKGPVA-SISTTSSKVVYPDTSKMLIYDPKHNPGT--- 580
Query: 182 VQPGISIMPSSNVTLGGAGASNALNDILKTLPPALAAFVANLPAVEGPSPEVDFVISVCL 361
GA +NA ++ILK PPAL AF+ANLP+V+GP+P VD V+S+CL
Sbjct: 581 ----------------GAAGTNAFDEILKATPPALVAFLANLPSVDGPTPNVDIVLSICL 624
Query: 362 QSNIPLATGKAVP---PTQKQAGPAPSTSDLSGSAKLKPKRD---------RHVGKRKDL 505
QS++P TG++V P+Q AGPAP+TS+LSGS+K P + + GKRK L
Sbjct: 625 QSDLP--TGQSVKVGIPSQLPAGPAPATSELSGSSKSHPVQSGLSHMQPGRKQYGKRKQL 682
Query: 506 ERQDDDDTATVQSQSLPRDVFKLRQLQKTRASASHTTGSASYGSAFSGELSGSTG 670
+ Q++DDT +VQSQ LP+D F++RQ QK RA ++ TGS SYGSA SG+LSGSTG
Sbjct: 683 DSQEEDDTKSVQSQPLPQDAFRIRQFQKARAGSTSQTGSVSYGSALSGDLSGSTG 737