BLASTX nr result

ID: Rauwolfia21_contig00020493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00020493
         (368 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71391.1| hypothetical protein VITISV_038145 [Vitis vinifera]    74   3e-11
ref|XP_006405050.1| hypothetical protein EUTSA_v10000595mg, part...    73   4e-11
gb|ESW06858.1| hypothetical protein PHAVU_010G082600g, partial [...    64   2e-08
ref|XP_002309902.1| predicted protein [Populus trichocarpa]            60   3e-07
ref|XP_002298374.1| hypothetical protein POPTR_0001s24230g [Popu...    60   3e-07
ref|XP_002333474.1| predicted protein [Populus trichocarpa]            60   3e-07
ref|XP_002314389.1| predicted protein [Populus trichocarpa]            60   4e-07
emb|CAN61554.1| hypothetical protein VITISV_028479 [Vitis vinifera]    60   4e-07
ref|XP_002335861.1| predicted protein [Populus trichocarpa]            57   2e-06
emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera]    57   3e-06
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]          56   4e-06

>emb|CAN71391.1| hypothetical protein VITISV_038145 [Vitis vinifera]
          Length = 579

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 35/66 (53%), Positives = 49/66 (74%)
 Frame = -1

Query: 203 MEESTSSSGNMIKLTSSNYAIWKPRIEDLLYCKDMYEPILGDGAKPEGTSDVTWAKMHRK 24
           MEE++S    MIKL +SNY+IWK R++D+LYCK+++EPI   G KP  T +  W K++RK
Sbjct: 1   MEEASSG---MIKLIASNYSIWKTRMKDILYCKELFEPIECRGYKPITTIEDEWKKLNRK 57

Query: 23  TIGHIR 6
           T+G IR
Sbjct: 58  TVGXIR 63


>ref|XP_006405050.1| hypothetical protein EUTSA_v10000595mg, partial [Eutrema
           salsugineum] gi|557106178|gb|ESQ46503.1| hypothetical
           protein EUTSA_v10000595mg, partial [Eutrema salsugineum]
          Length = 246

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 33/66 (50%), Positives = 45/66 (68%)
 Frame = -1

Query: 203 MEESTSSSGNMIKLTSSNYAIWKPRIEDLLYCKDMYEPILGDGAKPEGTSDVTWAKMHRK 24
           ME + +  G+M KLT+ NY+ WKP +ED LYCKD++EPI+    KPEG  D TW  ++RK
Sbjct: 1   MEATVTVEGDMFKLTTDNYSYWKPMMEDHLYCKDLHEPIIMKD-KPEGKDDKTWEVLNRK 59

Query: 23  TIGHIR 6
            +  IR
Sbjct: 60  AVAVIR 65


>gb|ESW06858.1| hypothetical protein PHAVU_010G082600g, partial [Phaseolus
           vulgaris]
          Length = 223

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/64 (48%), Positives = 41/64 (64%)
 Frame = -1

Query: 197 ESTSSSGNMIKLTSSNYAIWKPRIEDLLYCKDMYEPILGDGAKPEGTSDVTWAKMHRKTI 18
           E     G+M KLT+ NY+ WK  +ED LYCKDM+EPI     KP+G SD  W  ++RKT+
Sbjct: 2   EGAIYDGDMFKLTTKNYSYWKLMMEDHLYCKDMHEPITCI-TKPKGKSDKDWELLNRKTV 60

Query: 17  GHIR 6
             I+
Sbjct: 61  AMIQ 64


>ref|XP_002309902.1| predicted protein [Populus trichocarpa]
          Length = 291

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/56 (48%), Positives = 35/56 (62%)
 Frame = -1

Query: 173 MIKLTSSNYAIWKPRIEDLLYCKDMYEPILGDGAKPEGTSDVTWAKMHRKTIGHIR 6
           MIKLTSSNY +WK  +ED LYC D+  PI   G KP+   D  W  ++RK   ++R
Sbjct: 8   MIKLTSSNYFLWKTMMEDHLYCNDLALPIECKGIKPDDMDDAKWNGLNRKATANVR 63


>ref|XP_002298374.1| hypothetical protein POPTR_0001s24230g [Populus trichocarpa]
           gi|222845632|gb|EEE83179.1| hypothetical protein
           POPTR_0001s24230g [Populus trichocarpa]
          Length = 335

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/56 (48%), Positives = 35/56 (62%)
 Frame = -1

Query: 173 MIKLTSSNYAIWKPRIEDLLYCKDMYEPILGDGAKPEGTSDVTWAKMHRKTIGHIR 6
           MIKLTSSNY +WK  +ED LYC D+  PI   G KP+   D  W  ++RK   ++R
Sbjct: 8   MIKLTSSNYFLWKTMMEDHLYCNDLALPIECKGIKPDDMDDAKWNGLNRKATANVR 63


>ref|XP_002333474.1| predicted protein [Populus trichocarpa]
          Length = 111

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/56 (48%), Positives = 35/56 (62%)
 Frame = -1

Query: 173 MIKLTSSNYAIWKPRIEDLLYCKDMYEPILGDGAKPEGTSDVTWAKMHRKTIGHIR 6
           MIKLTSSNY +WK  +ED LYC D+  PI   G KP+   D  W  ++RK   ++R
Sbjct: 8   MIKLTSSNYFLWKTMMEDHLYCNDLALPIECKGIKPDDMDDAKWNGLNRKATANVR 63


>ref|XP_002314389.1| predicted protein [Populus trichocarpa]
          Length = 341

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/56 (48%), Positives = 35/56 (62%)
 Frame = -1

Query: 173 MIKLTSSNYAIWKPRIEDLLYCKDMYEPILGDGAKPEGTSDVTWAKMHRKTIGHIR 6
           MIKLTSSNY +WK  +ED LYC D+  PI   G KP+   D  W  ++RK   ++R
Sbjct: 8   MIKLTSSNYFLWKTMMEDHLYCNDLDLPIECKGIKPDDMDDAKWNGLNRKATANVR 63


>emb|CAN61554.1| hypothetical protein VITISV_028479 [Vitis vinifera]
          Length = 1144

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/61 (42%), Positives = 38/61 (62%)
 Frame = -1

Query: 188 SSSGNMIKLTSSNYAIWKPRIEDLLYCKDMYEPILGDGAKPEGTSDVTWAKMHRKTIGHI 9
           S++  MI L  SNY +WK ++EDLLY +D Y P+     KPE  +D  W  +HR+  G+I
Sbjct: 3   SNTSRMITLNGSNYHVWKGKMEDLLYVQDYYLPVFA-SEKPENKTDAEWNLLHRQVCGYI 61

Query: 8   R 6
           +
Sbjct: 62  K 62


>ref|XP_002335861.1| predicted protein [Populus trichocarpa]
          Length = 208

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/56 (46%), Positives = 34/56 (60%)
 Frame = -1

Query: 173 MIKLTSSNYAIWKPRIEDLLYCKDMYEPILGDGAKPEGTSDVTWAKMHRKTIGHIR 6
           M KLTSSNY +WK  +ED LYC D+  PI   G KP+   D  W  ++RK   ++R
Sbjct: 8   MKKLTSSNYFLWKTMMEDHLYCNDLALPIECKGIKPDDMDDAKWNGLNRKATANVR 63


>emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera]
          Length = 1183

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/61 (42%), Positives = 36/61 (59%)
 Frame = -1

Query: 188 SSSGNMIKLTSSNYAIWKPRIEDLLYCKDMYEPILGDGAKPEGTSDVTWAKMHRKTIGHI 9
           S++  MI +  SNY +WK ++EDLLY KD Y  +     KPE  +D  W  +HR   G+I
Sbjct: 3   SNTSRMITVNGSNYHVWKGKMEDLLYAKDYYLLVFA-SEKPENKTDAKWDLLHRHVCGYI 61

Query: 8   R 6
           R
Sbjct: 62  R 62


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/66 (42%), Positives = 41/66 (62%)
 Frame = -1

Query: 203 MEESTSSSGNMIKLTSSNYAIWKPRIEDLLYCKDMYEPILGDGAKPEGTSDVTWAKMHRK 24
           ME +TS   NM++L   NY IWK +++DLL+ K ++ P+    AKPE  SD  W   H++
Sbjct: 1   METNTS---NMVRLNGRNYHIWKAKMKDLLFVKKLHLPVFA-SAKPENMSDEEWDFEHQQ 56

Query: 23  TIGHIR 6
             G+IR
Sbjct: 57  VCGYIR 62


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