BLASTX nr result
ID: Rauwolfia21_contig00020377
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00020377
(235 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006340159.1| PREDICTED: yrdC domain-containing protein, m... 97 2e-18
gb|EMJ06864.1| hypothetical protein PRUPE_ppa009466mg [Prunus pe... 97 2e-18
ref|XP_004251129.1| PREDICTED: yrdC domain-containing protein, m... 95 1e-17
gb|EOY34341.1| DHBP synthase RibB-like alpha/beta domain isoform... 93 3e-17
gb|EOY34340.1| DHBP synthase RibB-like alpha/beta domain isoform... 93 3e-17
ref|XP_002285123.1| PREDICTED: yrdC domain-containing protein, m... 86 5e-15
emb|CAN77236.1| hypothetical protein VITISV_024209 [Vitis vinifera] 86 5e-15
ref|XP_002313460.2| hypothetical protein POPTR_0009s03050g [Popu... 83 4e-14
ref|XP_004505988.1| PREDICTED: yrdC domain-containing protein, m... 80 2e-13
ref|XP_006340160.1| PREDICTED: yrdC domain-containing protein, m... 80 3e-13
ref|XP_004251130.1| PREDICTED: yrdC domain-containing protein, m... 80 3e-13
ref|XP_003606393.1| YrdC domain-containing protein [Medicago tru... 79 6e-13
ref|XP_002879291.1| hypothetical protein ARALYDRAFT_482017 [Arab... 78 1e-12
ref|XP_004295027.1| PREDICTED: yrdC domain-containing protein, m... 77 3e-12
ref|XP_002530287.1| Protein SUA5, putative [Ricinus communis] gi... 77 3e-12
ref|XP_006281699.1| hypothetical protein CARUB_v10027848mg [Caps... 76 5e-12
ref|NP_974970.1| DHBP synthase RibB-like alpha/beta domain-conta... 76 5e-12
ref|NP_568924.1| DHBP synthase RibB-like alpha/beta domain-conta... 76 5e-12
ref|XP_006488108.1| PREDICTED: yrdC domain-containing protein, m... 75 7e-12
ref|XP_002864693.1| hypothetical protein ARALYDRAFT_358267 [Arab... 75 1e-11
>ref|XP_006340159.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
isoform X1 [Solanum tuberosum]
Length = 280
Score = 97.1 bits (240), Expect = 2e-18
Identities = 48/78 (61%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 VQKFGFVSL-VQERSWFRGASVKKMAWSVEKCDGNVGTEMGLVRPATEDYAEEAIEAVNA 179
V+K GF++L + R F SVKKM WS+E DG+V T+ V PA EDY +EAIEA+ A
Sbjct: 25 VEKIGFLNLWARSRKGFSAVSVKKMGWSLENPDGDVETKKATVSPAAEDYGQEAIEAIRA 84
Query: 180 GNVIAVPTDTLYGFACDA 233
G VIAVPTDTLYGFACDA
Sbjct: 85 GKVIAVPTDTLYGFACDA 102
>gb|EMJ06864.1| hypothetical protein PRUPE_ppa009466mg [Prunus persica]
Length = 291
Score = 97.1 bits (240), Expect = 2e-18
Identities = 49/77 (63%), Positives = 57/77 (74%)
Frame = +3
Query: 3 VQKFGFVSLVQERSWFRGASVKKMAWSVEKCDGNVGTEMGLVRPATEDYAEEAIEAVNAG 182
V+K G V VQ R R +KMAWS+EKCD V TE+G+VRPAT + EEA+EA+ AG
Sbjct: 38 VRKLGLVPTVQSRR-LRRCVEEKMAWSLEKCDAGVETELGVVRPATGAHTEEAVEALRAG 96
Query: 183 NVIAVPTDTLYGFACDA 233
VIAVPTDTLYGFACDA
Sbjct: 97 KVIAVPTDTLYGFACDA 113
>ref|XP_004251129.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
isoform 1 [Solanum lycopersicum]
Length = 281
Score = 94.7 bits (234), Expect = 1e-17
Identities = 47/78 (60%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 VQKFGFVSL-VQERSWFRGASVKKMAWSVEKCDGNVGTEMGLVRPATEDYAEEAIEAVNA 179
V+K GF++L + R SVKKM WS+E DG+V T+ V PA EDY +EAIEA+ A
Sbjct: 26 VEKIGFLNLWARSRKGLSAVSVKKMGWSLENPDGDVETKKATVSPAAEDYGQEAIEAIRA 85
Query: 180 GNVIAVPTDTLYGFACDA 233
G VIAVPTDTLYGFACDA
Sbjct: 86 GKVIAVPTDTLYGFACDA 103
>gb|EOY34341.1| DHBP synthase RibB-like alpha/beta domain isoform 2, partial
[Theobroma cacao]
Length = 277
Score = 93.2 bits (230), Expect = 3e-17
Identities = 45/77 (58%), Positives = 58/77 (75%)
Frame = +3
Query: 3 VQKFGFVSLVQERSWFRGASVKKMAWSVEKCDGNVGTEMGLVRPATEDYAEEAIEAVNAG 182
V K GFV +Q++ FRG KKM +VE+C+ V +++GLV PAT+ YA+EA+ A+ AG
Sbjct: 23 VPKLGFVPFLQQKRRFRGGFSKKMGSNVERCEVGVESKLGLVHPATKFYADEAVIALKAG 82
Query: 183 NVIAVPTDTLYGFACDA 233
VIAVPTDTLYGFACDA
Sbjct: 83 KVIAVPTDTLYGFACDA 99
>gb|EOY34340.1| DHBP synthase RibB-like alpha/beta domain isoform 1 [Theobroma
cacao]
Length = 327
Score = 93.2 bits (230), Expect = 3e-17
Identities = 45/77 (58%), Positives = 58/77 (75%)
Frame = +3
Query: 3 VQKFGFVSLVQERSWFRGASVKKMAWSVEKCDGNVGTEMGLVRPATEDYAEEAIEAVNAG 182
V K GFV +Q++ FRG KKM +VE+C+ V +++GLV PAT+ YA+EA+ A+ AG
Sbjct: 73 VPKLGFVPFLQQKRRFRGGFSKKMGSNVERCEVGVESKLGLVHPATKFYADEAVIALKAG 132
Query: 183 NVIAVPTDTLYGFACDA 233
VIAVPTDTLYGFACDA
Sbjct: 133 KVIAVPTDTLYGFACDA 149
>ref|XP_002285123.1| PREDICTED: yrdC domain-containing protein, mitochondrial [Vitis
vinifera] gi|297746251|emb|CBI16307.3| unnamed protein
product [Vitis vinifera]
Length = 272
Score = 85.9 bits (211), Expect = 5e-15
Identities = 44/77 (57%), Positives = 57/77 (74%)
Frame = +3
Query: 3 VQKFGFVSLVQERSWFRGASVKKMAWSVEKCDGNVGTEMGLVRPATEDYAEEAIEAVNAG 182
V KFGFV ++++ FR + KKM + +G+E+G+VRPAT+ +AEEAIEA+ AG
Sbjct: 25 VAKFGFVQILKQNRRFRVSFPKKM-------EAVMGSELGVVRPATDAHAEEAIEAIKAG 77
Query: 183 NVIAVPTDTLYGFACDA 233
VIAVPTDTLYGFACDA
Sbjct: 78 KVIAVPTDTLYGFACDA 94
>emb|CAN77236.1| hypothetical protein VITISV_024209 [Vitis vinifera]
Length = 750
Score = 85.9 bits (211), Expect = 5e-15
Identities = 44/77 (57%), Positives = 57/77 (74%)
Frame = +3
Query: 3 VQKFGFVSLVQERSWFRGASVKKMAWSVEKCDGNVGTEMGLVRPATEDYAEEAIEAVNAG 182
V KFGFV ++++ FR + KKM + +G+E+G+VRPAT+ +AEEAIEA+ AG
Sbjct: 578 VAKFGFVQILKQNRRFRVSFPKKM-------EAVMGSELGVVRPATDAHAEEAIEAIKAG 630
Query: 183 NVIAVPTDTLYGFACDA 233
VIAVPTDTLYGFACDA
Sbjct: 631 KVIAVPTDTLYGFACDA 647
>ref|XP_002313460.2| hypothetical protein POPTR_0009s03050g [Populus trichocarpa]
gi|550330924|gb|EEE87415.2| hypothetical protein
POPTR_0009s03050g [Populus trichocarpa]
Length = 284
Score = 82.8 bits (203), Expect = 4e-14
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = +3
Query: 3 VQKFGFVSLVQERSWFRGASVKKMAWSVEKCDGNVGTEMGLVRPATEDYAEEAIEAVNAG 182
V K GFV + + KKM+ S+E C +V ++ +VRPATE YA+EAIEA+ AG
Sbjct: 30 VPKLGFVPFLTHKRHLGLGFSKKMSSSMENCHVDVQNKLEVVRPATEVYAQEAIEALKAG 89
Query: 183 NVIAVPTDTLYGFACDA 233
VIAVPTDTLYGFACDA
Sbjct: 90 KVIAVPTDTLYGFACDA 106
>ref|XP_004505988.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
[Cicer arietinum]
Length = 293
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/61 (62%), Positives = 49/61 (80%)
Frame = +3
Query: 51 RGASVKKMAWSVEKCDGNVGTEMGLVRPATEDYAEEAIEAVNAGNVIAVPTDTLYGFACD 230
RG S K MAWS+++C+ + ++G+V PAT+ YA EA+EA+ AG VIAVPTDTLYGFACD
Sbjct: 59 RGFS-KNMAWSMDRCELGLEVKIGVVHPATDAYAAEAVEALKAGKVIAVPTDTLYGFACD 117
Query: 231 A 233
A
Sbjct: 118 A 118
>ref|XP_006340160.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
isoform X2 [Solanum tuberosum]
Length = 232
Score = 80.1 bits (196), Expect = 3e-13
Identities = 37/54 (68%), Positives = 42/54 (77%)
Frame = +3
Query: 72 MAWSVEKCDGNVGTEMGLVRPATEDYAEEAIEAVNAGNVIAVPTDTLYGFACDA 233
M WS+E DG+V T+ V PA EDY +EAIEA+ AG VIAVPTDTLYGFACDA
Sbjct: 1 MGWSLENPDGDVETKKATVSPAAEDYGQEAIEAIRAGKVIAVPTDTLYGFACDA 54
>ref|XP_004251130.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
isoform 2 [Solanum lycopersicum]
Length = 232
Score = 80.1 bits (196), Expect = 3e-13
Identities = 37/54 (68%), Positives = 42/54 (77%)
Frame = +3
Query: 72 MAWSVEKCDGNVGTEMGLVRPATEDYAEEAIEAVNAGNVIAVPTDTLYGFACDA 233
M WS+E DG+V T+ V PA EDY +EAIEA+ AG VIAVPTDTLYGFACDA
Sbjct: 1 MGWSLENPDGDVETKKATVSPAAEDYGQEAIEAIRAGKVIAVPTDTLYGFACDA 54
>ref|XP_003606393.1| YrdC domain-containing protein [Medicago truncatula]
gi|355507448|gb|AES88590.1| YrdC domain-containing
protein [Medicago truncatula]
Length = 462
Score = 79.0 bits (193), Expect = 6e-13
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = +3
Query: 72 MAWSVEKCDGNVGTEMGLVRPATEDYAEEAIEAVNAGNVIAVPTDTLYGFACDA 233
MAWS+E+CD + + G+V PAT+ YA EA+E + AG VIAVPTDTLYGFACDA
Sbjct: 1 MAWSMERCDLGLDVKTGVVHPATDAYAAEAVETLKAGKVIAVPTDTLYGFACDA 54
>ref|XP_002879291.1| hypothetical protein ARALYDRAFT_482017 [Arabidopsis lyrata subsp.
lyrata] gi|297325130|gb|EFH55550.1| hypothetical protein
ARALYDRAFT_482017 [Arabidopsis lyrata subsp. lyrata]
Length = 263
Score = 78.2 bits (191), Expect = 1e-12
Identities = 40/77 (51%), Positives = 49/77 (63%)
Frame = +3
Query: 3 VQKFGFVSLVQERSWFRGASVKKMAWSVEKCDGNVGTEMGLVRPATEDYAEEAIEAVNAG 182
V + F S+ R KKM WS+E+ + V + LV PATE YA+EAIEA+ +
Sbjct: 27 VSELRFFSIANHSRRLRWGLQKKMVWSLERAETCVVSNSCLVHPATEAYAQEAIEAIKSD 86
Query: 183 NVIAVPTDTLYGFACDA 233
VIAVPTDTLYGFACDA
Sbjct: 87 KVIAVPTDTLYGFACDA 103
>ref|XP_004295027.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 234
Score = 76.6 bits (187), Expect = 3e-12
Identities = 37/56 (66%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
Frame = +3
Query: 72 MAWSVEKCDGNVG--TEMGLVRPATEDYAEEAIEAVNAGNVIAVPTDTLYGFACDA 233
MAWS+EK D T++G+VRPATE + +EA+EA+ AG VIAVPTDTLYGFACDA
Sbjct: 1 MAWSLEKLDAAAFEVTQLGVVRPATEAHVDEAVEALRAGKVIAVPTDTLYGFACDA 56
>ref|XP_002530287.1| Protein SUA5, putative [Ricinus communis]
gi|223530185|gb|EEF32094.1| Protein SUA5, putative
[Ricinus communis]
Length = 233
Score = 76.6 bits (187), Expect = 3e-12
Identities = 39/56 (69%), Positives = 48/56 (85%), Gaps = 2/56 (3%)
Frame = +3
Query: 72 MAWSVEKCDGNVGT--EMGLVRPATEDYAEEAIEAVNAGNVIAVPTDTLYGFACDA 233
MAWS+++ + NV T ++G+VRPATE YAEEA+EA+ AG VIAVPTDTLYGFACDA
Sbjct: 1 MAWSLQRSN-NVDTADKLGVVRPATELYAEEAVEALKAGKVIAVPTDTLYGFACDA 55
>ref|XP_006281699.1| hypothetical protein CARUB_v10027848mg [Capsella rubella]
gi|482550403|gb|EOA14597.1| hypothetical protein
CARUB_v10027848mg [Capsella rubella]
Length = 283
Score = 75.9 bits (185), Expect = 5e-12
Identities = 39/77 (50%), Positives = 48/77 (62%)
Frame = +3
Query: 3 VQKFGFVSLVQERSWFRGASVKKMAWSVEKCDGNVGTEMGLVRPATEDYAEEAIEAVNAG 182
V + F S+ R KKM WS+E+ + V + V PATE YA+EAIEA+ +
Sbjct: 27 VSELRFFSIANHSRRLRWGLQKKMVWSLERAETCVVSNSCFVHPATEAYAKEAIEAIKSE 86
Query: 183 NVIAVPTDTLYGFACDA 233
VIAVPTDTLYGFACDA
Sbjct: 87 KVIAVPTDTLYGFACDA 103
>ref|NP_974970.1| DHBP synthase RibB-like alpha/beta domain-containing protein
[Arabidopsis thaliana] gi|332009969|gb|AED97352.1| DHBP
synthase RibB-like alpha/beta domain-containing protein
[Arabidopsis thaliana]
Length = 288
Score = 75.9 bits (185), Expect = 5e-12
Identities = 38/70 (54%), Positives = 48/70 (68%)
Frame = +3
Query: 24 SLVQERSWFRGASVKKMAWSVEKCDGNVGTEMGLVRPATEDYAEEAIEAVNAGNVIAVPT 203
S+ + R KKM WS+E+ + V ++ LV PATE YA+EAIEA+ + VIAVPT
Sbjct: 34 SIANQSRRLRWGLQKKMVWSLERAETCVVSKSCLVHPATEAYAQEAIEAIKSEKVIAVPT 93
Query: 204 DTLYGFACDA 233
DTLYGFACDA
Sbjct: 94 DTLYGFACDA 103
>ref|NP_568924.1| DHBP synthase RibB-like alpha/beta domain-containing protein
[Arabidopsis thaliana]
gi|14190379|gb|AAK55670.1|AF378867_1 AT5g60590/muf9_240
[Arabidopsis thaliana] gi|15215871|gb|AAK91479.1|
AT5g60590/muf9_240 [Arabidopsis thaliana]
gi|332009968|gb|AED97351.1| DHBP synthase RibB-like
alpha/beta domain-containing protein [Arabidopsis
thaliana]
Length = 164
Score = 75.9 bits (185), Expect = 5e-12
Identities = 38/70 (54%), Positives = 48/70 (68%)
Frame = +3
Query: 24 SLVQERSWFRGASVKKMAWSVEKCDGNVGTEMGLVRPATEDYAEEAIEAVNAGNVIAVPT 203
S+ + R KKM WS+E+ + V ++ LV PATE YA+EAIEA+ + VIAVPT
Sbjct: 34 SIANQSRRLRWGLQKKMVWSLERAETCVVSKSCLVHPATEAYAQEAIEAIKSEKVIAVPT 93
Query: 204 DTLYGFACDA 233
DTLYGFACDA
Sbjct: 94 DTLYGFACDA 103
>ref|XP_006488108.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
isoform X1 [Citrus sinensis]
Length = 273
Score = 75.5 bits (184), Expect = 7e-12
Identities = 43/77 (55%), Positives = 51/77 (66%)
Frame = +3
Query: 3 VQKFGFVSLVQERSWFRGASVKKMAWSVEKCDGNVGTEMGLVRPATEDYAEEAIEAVNAG 182
V K FVS + F KKMA+ +E +V + GLVRPATE +AEEAI+A+ G
Sbjct: 23 VPKLRFVSFLYLNRRFP----KKMAFCLENGQVSVENKAGLVRPATEAHAEEAIQALKTG 78
Query: 183 NVIAVPTDTLYGFACDA 233
VIAVPTDTLYGFACDA
Sbjct: 79 KVIAVPTDTLYGFACDA 95
>ref|XP_002864693.1| hypothetical protein ARALYDRAFT_358267 [Arabidopsis lyrata subsp.
lyrata] gi|297310528|gb|EFH40952.1| hypothetical protein
ARALYDRAFT_358267 [Arabidopsis lyrata subsp. lyrata]
Length = 284
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = +3
Query: 66 KKMAWSVEKCDGNVGTEMGLVRPATEDYAEEAIEAVNAGNVIAVPTDTLYGFACDA 233
KKM WS+E+ + V + LV PATE YA+EAIEA+ + VIAVPTDTLYGFACDA
Sbjct: 48 KKMVWSLERAETCVVSNSCLVHPATEAYAQEAIEAIKSEKVIAVPTDTLYGFACDA 103