BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00020316
         (649 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFU96373.1| NdhB, partial (chloroplast) [Hypericum perforatum]      50   5e-06
gb|ADZ93520.1| NADH dehydrogenase subunit B [Anarthria scabra]         51   6e-06

>gb|AFU96373.1| NdhB, partial (chloroplast) [Hypericum perforatum]
          Length = 512

 Score = 49.7 bits (117), Expect(2) = 5e-06
 Identities = 25/45 (55%), Positives = 29/45 (64%)
 Frame = -2

Query: 276 FF*FVLKIARGRMFLHSAKNFITIILAP*CVSLCFYLLSRYTKKE 142
           F  F+L    G MFL  A + ITI +AP C SLC YLLS YTKK+
Sbjct: 129 FLLFILTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD 173



 Score = 26.9 bits (58), Expect(2) = 5e-06
 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
 Frame = -1

Query: 430 LLVWRK*AINLFSFN-QTSIPSFREFSYFTML---S*SFPLSKQFTNHKEMAITEVFL 269
           L  WR+  +  FS N QT+  +F E   F +L   + S PLS ++    EMAITE  L
Sbjct: 76  LFRWREEPMISFSGNFQTN--NFNELFQFLILLCSTLSIPLSVEYIECTEMAITEFLL 131


>gb|ADZ93520.1| NADH dehydrogenase subunit B [Anarthria scabra]
          Length = 450

 Score = 51.2 bits (121), Expect(2) = 6e-06
 Identities = 26/45 (57%), Positives = 30/45 (66%)
 Frame = -2

Query: 276 FF*FVLKIARGRMFLHSAKNFITIILAP*CVSLCFYLLSRYTKKE 142
           F  FVL    G MFL  A +FITI +AP C SLC YLLS YTK++
Sbjct: 111 FLLFVLTATLGGMFLCGANDFITIFVAPECFSLCSYLLSGYTKRD 155



 Score = 25.0 bits (53), Expect(2) = 6e-06
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = -1

Query: 430 LLVWRK*AINLFS--FNQTSIPSFREFSYFTMLS*SFPLSKQFTNHKEMAITEVFL 269
           L  WR+  I  FS  F   ++    +F      +   PLS ++    EMAITE  L
Sbjct: 58  LFRWREEPIISFSGNFQTNNLNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLL 113