BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00020238
         (1722 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY18594.1| Pseudouridine synthase family protein [Theobroma ...   543   e-152
ref|XP_004307403.1| PREDICTED: RNA pseudourine synthase 5-like [...   538   e-150
ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like...   533   e-149
ref|XP_004233537.1| PREDICTED: RNA pseudourine synthase 5-like [...   533   e-148
ref|XP_006485880.1| PREDICTED: RNA pseudouridine synthase 5-like...   530   e-147
ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like...   527   e-147
ref|XP_004496322.1| PREDICTED: RNA pseudourine synthase 5-like [...   527   e-147
ref|XP_002312025.1| hypothetical protein POPTR_0008s04160g [Popu...   526   e-147
gb|ESW15679.1| hypothetical protein PHAVU_007G093000g [Phaseolus...   525   e-146
emb|CBI31488.3| unnamed protein product [Vitis vinifera]              525   e-146
ref|XP_006485879.1| PREDICTED: RNA pseudouridine synthase 5-like...   525   e-146
ref|XP_002276664.1| PREDICTED: RNA pseudourine synthase 5-like [...   521   e-145
ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [...   520   e-144
ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatul...   520   e-144
gb|EXB80105.1| RNA pseudourine synthase 5 [Morus notabilis]           518   e-144
ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [...   518   e-144
ref|XP_003556222.1| PREDICTED: RNA pseudouridine synthase 5-like...   517   e-144
ref|XP_006403820.1| hypothetical protein EUTSA_v10010446mg [Eutr...   493   e-137
ref|XP_006346978.1| PREDICTED: RNA pseudouridine synthase 5-like...   490   e-136
ref|NP_974416.1| RNA pseudourine synthase 5 [Arabidopsis thalian...   489   e-135

>gb|EOY18594.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 378

 Score =  543 bits (1399), Expect = e-152
 Identities = 262/373 (70%), Positives = 314/373 (84%), Gaps = 3/373 (0%)
 Frame = -1

Query: 1398 SGDSST-ARIFGEPWPDFNDGLTYRDLVSSADAGLSLIEYYSKKHKNSAPFQGWLQRIQN 1222
            S DS T + +FG PWP+ NDGL Y D++  +D+ L+LIE+YS K+KNSAP QGWLQRIQN
Sbjct: 2    SNDSQTQSLVFGLPWPELNDGLFYDDVIKPSDSELTLIEFYSSKYKNSAPSQGWLQRIQN 61

Query: 1221 KQIRVDGFIVTDRNTILRTGSELVYHRLPWKEPDAPYLLEILYEDDNLIALNKPSGLQVL 1042
             QI VDG +V D NTILR  SELVYHRLPWKEPDAP+ LE+LYEDD++IALNKPSGLQVL
Sbjct: 62   GQISVDGRVVRDPNTILRGSSELVYHRLPWKEPDAPHALEVLYEDDDMIALNKPSGLQVL 121

Query: 1041 PGGLFQQRTVLTQLQWCASKEISSC--EDPNPVPVHRLGRGTSGILLCAKTKFAKSCLAA 868
            PGGLFQQRTVLTQL W   K+ SS   ++ +PVPVHRLGRGTSGILLCAKTK AK+CLAA
Sbjct: 122  PGGLFQQRTVLTQLSWRMRKQTSSLASQESHPVPVHRLGRGTSGILLCAKTKAAKTCLAA 181

Query: 867  YFADGTSVVGDKRYKNAEPNRMRKISKIYRALASGIINDDKVVIDQPIGIVKYPSVAKGL 688
            YFADGTS++G    +  +P+  RKISKIYRAL +GI+ +DKVVI+QPIGIV+YP VAKGL
Sbjct: 182  YFADGTSLIGANSNRKMQPSCTRKISKIYRALVTGILGEDKVVINQPIGIVQYPGVAKGL 241

Query: 687  YVASPSGKPALSKVAILERNKRSNTTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAG 508
            YVASPSGKPALSKV +LE++++ N TLVQV+I+SGRPHQIRIHLSFIGHPLLGDPLY+AG
Sbjct: 242  YVASPSGKPALSKVEVLEKDEQQNHTLVQVQIESGRPHQIRIHLSFIGHPLLGDPLYIAG 301

Query: 507  GQPNCSGVELIDESFAQDGGYRKPENPVPGDCGYHLHAHQLVLVHPITNELIKIVAPLPS 328
            GQP C   E +DE++AQDGGY++P NPVPGDCGY+LHAH+L+L HP T+E+I I APLP 
Sbjct: 302  GQPRCFDSEFVDENYAQDGGYQRPVNPVPGDCGYYLHAHRLLLSHPTTDEIINITAPLPP 361

Query: 327  VLRTQEECKGIRQ 289
            VL+TQ+E +  R+
Sbjct: 362  VLQTQDEVRRSRE 374


>ref|XP_004307403.1| PREDICTED: RNA pseudourine synthase 5-like [Fragaria vesca subsp.
            vesca]
          Length = 375

 Score =  538 bits (1386), Expect = e-150
 Identities = 261/375 (69%), Positives = 312/375 (83%), Gaps = 2/375 (0%)
 Frame = -1

Query: 1407 MSNSGDSSTARIFGEPWPDFNDGLTYRDLVSSADAGLSLIEYYSKKHKNSAPFQGWLQRI 1228
            MS S  S + + FG PWPD NDGL+Y D+V S+D+ L+LIE+YS K+K+SAP QGWLQRI
Sbjct: 1    MSMSTSSLSTQTFGLPWPDLNDGLSYNDVVKSSDSELTLIEFYSSKYKSSAPLQGWLQRI 60

Query: 1227 QNKQIRVDGFIVTDRNTILRTGSELVYHRLPWKEPDAPYLLEILYEDDNLIALNKPSGLQ 1048
            +N QI VDG +V D +TILR GSELVYHRLPW EPDAPYLLE+LYEDD++IALNKP GLQ
Sbjct: 61   RNGQITVDGEVVRDSDTILRVGSELVYHRLPWGEPDAPYLLEVLYEDDDMIALNKPGGLQ 120

Query: 1047 VLPGGLFQQRTVLTQLQWCASKEIS--SCEDPNPVPVHRLGRGTSGILLCAKTKFAKSCL 874
            VLPGGLFQQRTVLTQL W  S++    +C+  + VPVHRLGRGTSGILLCAKTK AK+ L
Sbjct: 121  VLPGGLFQQRTVLTQLLWRESQKFDHLACQKSHLVPVHRLGRGTSGILLCAKTKHAKTQL 180

Query: 873  AAYFADGTSVVGDKRYKNAEPNRMRKISKIYRALASGIINDDKVVIDQPIGIVKYPSVAK 694
            AAYFADGTS +GD    N + +  RKI+KIYRAL +GII +D+V++ QPIG V+YP VAK
Sbjct: 181  AAYFADGTSHIGDDSTTNTKLHTTRKITKIYRALVTGIICEDEVIVKQPIGTVRYPGVAK 240

Query: 693  GLYVASPSGKPALSKVAILERNKRSNTTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYV 514
            GLY+ASP+GKPALSKV +L+R+ + N T+VQVEIQSGRPHQIRIHLSFIGHPLLGDPLYV
Sbjct: 241  GLYIASPAGKPALSKVEVLDRDIQKNHTIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYV 300

Query: 513  AGGQPNCSGVELIDESFAQDGGYRKPENPVPGDCGYHLHAHQLVLVHPITNELIKIVAPL 334
            AGGQP C G +L+DESFA DGG+++P  PVPGDCGY+LHAHQ+VL HP +NE+IKI APL
Sbjct: 301  AGGQPKCLGSDLVDESFADDGGFKRPTKPVPGDCGYNLHAHQVVLSHPSSNEVIKITAPL 360

Query: 333  PSVLRTQEECKGIRQ 289
            P VLRT+EE + +RQ
Sbjct: 361  PLVLRTREEIEELRQ 375


>ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X3 [Solanum
            tuberosum]
          Length = 374

 Score =  533 bits (1374), Expect = e-149
 Identities = 260/358 (72%), Positives = 302/358 (84%), Gaps = 3/358 (0%)
 Frame = -1

Query: 1371 FGEPWPDFNDGLTYRDLVSSADAGLSLIEYYSKKHKNSAPFQGWLQRIQNKQIRVDGFIV 1192
            FG  WP+ N+GLTY D+V   DAGL LIE+Y +K+KNSAP QGWLQRIQNKQI +DG +V
Sbjct: 14   FGVSWPELNEGLTYHDIVRPTDAGLMLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVV 73

Query: 1191 TDRNTILRTGSELVYHRLPWKEPDAPYLLEILYEDDNLIALNKPSGLQVLPGGLFQQRTV 1012
               +T LR G+ELVYHRLPW+EPDAPYLLE+L++DD LI +NKPSGLQVLPGGL+QQRTV
Sbjct: 74   ILPDTELRAGAELVYHRLPWREPDAPYLLEVLFQDDYLIVVNKPSGLQVLPGGLYQQRTV 133

Query: 1011 LTQLQWCASKEI---SSCEDPNPVPVHRLGRGTSGILLCAKTKFAKSCLAAYFADGTSVV 841
            LTQLQW A K     S C+  +PVPVHRLGRGTSGILLCAKTK  KS LAAYFA+GTSVV
Sbjct: 134  LTQLQWHACKPTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVV 193

Query: 840  GDKRYKNAEPNRMRKISKIYRALASGIINDDKVVIDQPIGIVKYPSVAKGLYVASPSGKP 661
             DK   N+E N MRKI KIYRAL SG+++ D+VVI QPIG +KYP VAKGLYVASPSGKP
Sbjct: 194  EDK-CTNSECNTMRKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAKGLYVASPSGKP 252

Query: 660  ALSKVAILERNKRSNTTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPNCSGVE 481
            ALS V +LER+  +N TLVQVEIQSGRPHQIRIHLSFIG+PL+GDPLYV+GGQP C   E
Sbjct: 253  ALSSVRVLERDSENNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPE 312

Query: 480  LIDESFAQDGGYRKPENPVPGDCGYHLHAHQLVLVHPITNELIKIVAPLPSVLRTQEE 307
            L+DESF +DGGY++PENPVPGDCGY+LHAHQ+ L+HPITNELIKI APLP++L+T+EE
Sbjct: 313  LMDESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTREE 370


>ref|XP_004233537.1| PREDICTED: RNA pseudourine synthase 5-like [Solanum lycopersicum]
          Length = 402

 Score =  533 bits (1372), Expect = e-148
 Identities = 262/371 (70%), Positives = 307/371 (82%), Gaps = 4/371 (1%)
 Frame = -1

Query: 1407 MSNSGDSSTARI-FGEPWPDFNDGLTYRDLVSSADAGLSLIEYYSKKHKNSAPFQGWLQR 1231
            MS   + +  R  FG PWP  N+GL+Y D+V   DAGL+LIE+Y +K+KNSAP QGWLQR
Sbjct: 24   MSEKAELAAVRAYFGVPWPQRNEGLSYHDIVRPTDAGLTLIEFYFRKYKNSAPLQGWLQR 83

Query: 1230 IQNKQIRVDGFIVTDRNTILRTGSELVYHRLPWKEPDAPYLLEILYEDDNLIALNKPSGL 1051
            IQNKQI +DG +V   +T LR G+ELVYHRLPW+EPDAPYLLE+L+EDD LI +NKPSGL
Sbjct: 84   IQNKQITIDGKVVILPDTELRAGAELVYHRLPWREPDAPYLLEVLFEDDYLIVVNKPSGL 143

Query: 1050 QVLPGGLFQQRTVLTQLQWCASK---EISSCEDPNPVPVHRLGRGTSGILLCAKTKFAKS 880
            QVLPGGL+QQRTVLTQLQW A K     S C+  +PVPVHRLGRGTSGILLCAKTK  KS
Sbjct: 144  QVLPGGLYQQRTVLTQLQWHACKLTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKS 203

Query: 879  CLAAYFADGTSVVGDKRYKNAEPNRMRKISKIYRALASGIINDDKVVIDQPIGIVKYPSV 700
             LAAYFA+GTSVV +K   N+E N MRKI KIYRAL SG+++ D+ VI QPIG +KYP V
Sbjct: 204  RLAAYFAEGTSVVEEK-CTNSECNTMRKICKIYRALVSGVMDMDEAVIKQPIGTIKYPGV 262

Query: 699  AKGLYVASPSGKPALSKVAILERNKRSNTTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPL 520
            AKGLYVASPSGKPALS V +LER+  SN TLVQVEIQSGRPHQIRIHLSFIG+PL+GDPL
Sbjct: 263  AKGLYVASPSGKPALSSVRVLERDSESNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPL 322

Query: 519  YVAGGQPNCSGVELIDESFAQDGGYRKPENPVPGDCGYHLHAHQLVLVHPITNELIKIVA 340
            YV+GGQP C   EL+DESF +DGGY++PENPVPGDCGY+LHAHQ+ L+HPITNELIKI A
Sbjct: 323  YVSGGQPKCFHPELLDESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITA 382

Query: 339  PLPSVLRTQEE 307
            PLP++L+T++E
Sbjct: 383  PLPAILQTRDE 393


>ref|XP_006485880.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X2 [Citrus
            sinensis] gi|568865018|ref|XP_006485881.1| PREDICTED: RNA
            pseudouridine synthase 5-like isoform X3 [Citrus
            sinensis]
          Length = 389

 Score =  530 bits (1364), Expect = e-147
 Identities = 263/369 (71%), Positives = 299/369 (81%), Gaps = 2/369 (0%)
 Frame = -1

Query: 1374 IFGEPWPDFNDGLTYRDLVSSADAGLSLIEYYSKKHKNSAPFQGWLQRIQNKQIRVDGFI 1195
            +FGEPWP  N+GL Y D+VS +D+ L+LIE+YS KHKNSAP QGWLQRIQN QI VDG +
Sbjct: 12   VFGEPWPQLNEGLLYNDVVSPSDSKLTLIEFYSTKHKNSAPLQGWLQRIQNGQITVDGRV 71

Query: 1194 VTDRNTILRTGSELVYHRLPWKEPDAPYLLEILYEDDNLIALNKPSGLQVLPGGLFQQRT 1015
            V D N IL  GSELVYHRLPWKEPD PYLLE+ YEDD+LIALNKPSGLQVLPGGLFQQRT
Sbjct: 72   VNDPNIILSAGSELVYHRLPWKEPDVPYLLEVFYEDDDLIALNKPSGLQVLPGGLFQQRT 131

Query: 1014 VLTQLQWCASKEISSCEDP--NPVPVHRLGRGTSGILLCAKTKFAKSCLAAYFADGTSVV 841
            VL QLQW ASK+ SS      +PVPVHRLGRGTSGILLCAKTK AK+C+AAYFAD TSVV
Sbjct: 132  VLKQLQWRASKQSSSLSSQASHPVPVHRLGRGTSGILLCAKTKLAKTCIAAYFADKTSVV 191

Query: 840  GDKRYKNAEPNRMRKISKIYRALASGIINDDKVVIDQPIGIVKYPSVAKGLYVASPSGKP 661
                         RKI+KIYRAL  GI+++DKV+I QPIGIV+YP VAKGLYVASPSGKP
Sbjct: 192  DADN--TVMELSQRKITKIYRALVHGIVDEDKVIIKQPIGIVRYPGVAKGLYVASPSGKP 249

Query: 660  ALSKVAILERNKRSNTTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPNCSGVE 481
            ALSKV +LER+ + N TLVQVEIQSGRPHQIRIHL+F+GHPLLGDPLYVAGGQP     E
Sbjct: 250  ALSKVDVLERDVQRNCTLVQVEIQSGRPHQIRIHLAFLGHPLLGDPLYVAGGQPKSFDSE 309

Query: 480  LIDESFAQDGGYRKPENPVPGDCGYHLHAHQLVLVHPITNELIKIVAPLPSVLRTQEECK 301
              D +FAQDGGY +P NPVPGDCGY+LHA+QL L HP TNE+IKI APLPSVL+T+EE +
Sbjct: 310  FADGTFAQDGGYERPVNPVPGDCGYYLHAYQLFLSHPTTNEVIKITAPLPSVLKTREEGR 369

Query: 300  GIRQELEME 274
             + + +  E
Sbjct: 370  EVDKSVGSE 378


>ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X1 [Solanum
            tuberosum] gi|565360441|ref|XP_006346976.1| PREDICTED:
            RNA pseudouridine synthase 5-like isoform X2 [Solanum
            tuberosum]
          Length = 379

 Score =  527 bits (1358), Expect = e-147
 Identities = 260/363 (71%), Positives = 302/363 (83%), Gaps = 8/363 (2%)
 Frame = -1

Query: 1371 FGEPWPDFNDGLTYRDLVSSADAGLSLIEYYSKKHKNSAPFQGWLQRIQNKQIRVDGFIV 1192
            FG  WP+ N+GLTY D+V   DAGL LIE+Y +K+KNSAP QGWLQRIQNKQI +DG +V
Sbjct: 14   FGVSWPELNEGLTYHDIVRPTDAGLMLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVV 73

Query: 1191 TDRNTIL-----RTGSELVYHRLPWKEPDAPYLLEILYEDDNLIALNKPSGLQVLPGGLF 1027
               +T L     R G+ELVYHRLPW+EPDAPYLLE+L++DD LI +NKPSGLQVLPGGL+
Sbjct: 74   ILPDTELSFWMCRAGAELVYHRLPWREPDAPYLLEVLFQDDYLIVVNKPSGLQVLPGGLY 133

Query: 1026 QQRTVLTQLQWCASKEI---SSCEDPNPVPVHRLGRGTSGILLCAKTKFAKSCLAAYFAD 856
            QQRTVLTQLQW A K     S C+  +PVPVHRLGRGTSGILLCAKTK  KS LAAYFA+
Sbjct: 134  QQRTVLTQLQWHACKPTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAE 193

Query: 855  GTSVVGDKRYKNAEPNRMRKISKIYRALASGIINDDKVVIDQPIGIVKYPSVAKGLYVAS 676
            GTSVV DK   N+E N MRKI KIYRAL SG+++ D+VVI QPIG +KYP VAKGLYVAS
Sbjct: 194  GTSVVEDK-CTNSECNTMRKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAKGLYVAS 252

Query: 675  PSGKPALSKVAILERNKRSNTTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPN 496
            PSGKPALS V +LER+  +N TLVQVEIQSGRPHQIRIHLSFIG+PL+GDPLYV+GGQP 
Sbjct: 253  PSGKPALSSVRVLERDSENNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPK 312

Query: 495  CSGVELIDESFAQDGGYRKPENPVPGDCGYHLHAHQLVLVHPITNELIKIVAPLPSVLRT 316
            C   EL+DESF +DGGY++PENPVPGDCGY+LHAHQ+ L+HPITNELIKI APLP++L+T
Sbjct: 313  CFHPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQT 372

Query: 315  QEE 307
            +EE
Sbjct: 373  REE 375


>ref|XP_004496322.1| PREDICTED: RNA pseudourine synthase 5-like [Cicer arietinum]
          Length = 368

 Score =  527 bits (1358), Expect = e-147
 Identities = 255/366 (69%), Positives = 306/366 (83%), Gaps = 2/366 (0%)
 Frame = -1

Query: 1386 STARIFGEPWPDFNDGLTYRDLVSSADAGLSLIEYYSKKHKNSAPFQGWLQRIQNKQIRV 1207
            S  +  G PWP+ NDGL+Y D+V  +DAGL+LIE+YS K+K+SAP QGWLQRI++ QI V
Sbjct: 2    SRQKKIGVPWPELNDGLSYNDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQITV 61

Query: 1206 DGFIVTDRNTILRTGSELVYHRLPWKEPDAPYLLEILYEDDNLIALNKPSGLQVLPGGLF 1027
            D  +VTD NT+LR GS+LVYHRLPWKEPDAP+ +++LYEDD++IALNKPSGLQVLPGGLF
Sbjct: 62   DAKVVTDPNTLLRAGSKLVYHRLPWKEPDAPHTIQVLYEDDDIIALNKPSGLQVLPGGLF 121

Query: 1026 QQRTVLTQLQWCASKEIS--SCEDPNPVPVHRLGRGTSGILLCAKTKFAKSCLAAYFADG 853
            QQRTVLTQLQW  + + +  + + P+PVPVHRLGRGTSGILLCAKTK A+  LA+YFADG
Sbjct: 122  QQRTVLTQLQWETNNKCTFEAHQKPHPVPVHRLGRGTSGILLCAKTKLARVHLASYFADG 181

Query: 852  TSVVGDKRYKNAEPNRMRKISKIYRALASGIINDDKVVIDQPIGIVKYPSVAKGLYVASP 673
            TS +G KR  N E   + KI+KIYRAL SGII++DKV IDQPIG+VKYP VAKGLYVAS 
Sbjct: 182  TSRIGGKRDTNQE---LGKIAKIYRALVSGIIDNDKVTIDQPIGMVKYPGVAKGLYVASQ 238

Query: 672  SGKPALSKVAILERNKRSNTTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPNC 493
            SGKPALS V ILERN + N+TLVQV+IQSGRPHQIRIHLSFIGHPL+GDPLY  GGQP C
Sbjct: 239  SGKPALSVVDILERNVKENSTLVQVKIQSGRPHQIRIHLSFIGHPLIGDPLYAVGGQPKC 298

Query: 492  SGVELIDESFAQDGGYRKPENPVPGDCGYHLHAHQLVLVHPITNELIKIVAPLPSVLRTQ 313
               + +D+SFA+DGGY +P  PVPGDCGY+LHAH+L+L HPITNE+I+I+APLPS+L+T 
Sbjct: 299  LDYDFLDDSFAEDGGYPRPPKPVPGDCGYYLHAHELLLTHPITNEIIEIIAPLPSILQTH 358

Query: 312  EECKGI 295
            EE K I
Sbjct: 359  EEAKEI 364


>ref|XP_002312025.1| hypothetical protein POPTR_0008s04160g [Populus trichocarpa]
            gi|222851845|gb|EEE89392.1| hypothetical protein
            POPTR_0008s04160g [Populus trichocarpa]
          Length = 377

 Score =  526 bits (1356), Expect = e-147
 Identities = 260/371 (70%), Positives = 300/371 (80%), Gaps = 4/371 (1%)
 Frame = -1

Query: 1407 MSNSGDSSTARIFGEPWPDFNDGLTYRDLVS-SADAGLSLIEYYSKKHKNSAPFQGWLQR 1231
            + N+   S    FG PWPD N+GL Y D+VS S+D+GL+LI +YS K+KNSAP QGWLQR
Sbjct: 2    LCNNNSRSPLCSFGSPWPDLNEGLFYNDVVSTSSDSGLTLIHFYSSKYKNSAPLQGWLQR 61

Query: 1230 IQNKQIRVDGFIVTDRNTILRTGSELVYHRLPWKEPDAPYLLEILYEDDNLIALNKPSGL 1051
            I N QI +DG +V +   ILR G ELVYHRLPW+EPDAPYLL++LYEDD+++ALNKP GL
Sbjct: 62   IHNGQITIDGEVVKEPKAILRDGMELVYHRLPWREPDAPYLLQVLYEDDDMVALNKPPGL 121

Query: 1050 QVLPGGLFQQRTVLTQLQWCASKEISSC--EDPNPVPVHRLGRGTSGILLCAKTKFAKSC 877
            QVLPGGLFQQRTVL QLQW ASK  SS   +  +PVPVHRLGRGTSGILLCAKTK AK+ 
Sbjct: 122  QVLPGGLFQQRTVLMQLQWRASKGSSSLAIQGSHPVPVHRLGRGTSGILLCAKTKVAKTS 181

Query: 876  LAAYFADGTSVVGDKRYKNAEPNRMRKISKIYRALASGIINDDKVVIDQPIGIVKYPSVA 697
            LAAYFADGTS++GD    N E ++ RKISKIYRAL +GI+N DK++I QPIG ++YP VA
Sbjct: 182  LAAYFADGTSLIGDSSNANMEQSKRRKISKIYRALVNGILNQDKIIIKQPIGTMRYPGVA 241

Query: 696  KGLYVASPSGKPALSKVAILERNKRSNTTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLY 517
            KGLYVASPSGKPALSKV +LER+ + N TLVQVEI+SGRPHQIRIHLSFIGHPLLGDPLY
Sbjct: 242  KGLYVASPSGKPALSKVEVLERDSQLNQTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLY 301

Query: 516  VAGGQPNCSGVELIDESFAQDGGYRKPENPVPGDCGYHLHAHQLVLVHPITNE-LIKIVA 340
              GGQP C   E  DESFA+DGGY +P  PVPGDCGY+LHAHQLVL HP  NE +IKI A
Sbjct: 302  DVGGQPMCFDSEHEDESFAEDGGYERPAKPVPGDCGYYLHAHQLVLSHPTKNEQVIKITA 361

Query: 339  PLPSVLRTQEE 307
            PLPS+LRTQ E
Sbjct: 362  PLPSILRTQAE 372


>gb|ESW15679.1| hypothetical protein PHAVU_007G093000g [Phaseolus vulgaris]
          Length = 365

 Score =  525 bits (1353), Expect = e-146
 Identities = 258/361 (71%), Positives = 304/361 (84%)
 Frame = -1

Query: 1377 RIFGEPWPDFNDGLTYRDLVSSADAGLSLIEYYSKKHKNSAPFQGWLQRIQNKQIRVDGF 1198
            R FG PWP+ NDGL+Y D+V S+D+GL+LIE+Y  K+K+SAP QGWLQRI++ QI  DG 
Sbjct: 5    RKFGIPWPECNDGLSYDDVVRSSDSGLTLIEFYFTKYKSSAPLQGWLQRIKSGQITFDGR 64

Query: 1197 IVTDRNTILRTGSELVYHRLPWKEPDAPYLLEILYEDDNLIALNKPSGLQVLPGGLFQQR 1018
            +VTD +T+LR GS+LVYHRLPWKEPDAP+++E+LYEDD +IALNKPSGLQVLPGGLFQQR
Sbjct: 65   VVTDSSTVLRVGSKLVYHRLPWKEPDAPHMIEVLYEDDEMIALNKPSGLQVLPGGLFQQR 124

Query: 1017 TVLTQLQWCASKEISSCEDPNPVPVHRLGRGTSGILLCAKTKFAKSCLAAYFADGTSVVG 838
            TVLTQLQW    E +  + P+PVPVHRLGRGTSGILLCAKTK A++ LA+YFADGTS +G
Sbjct: 125  TVLTQLQW----EANLHKKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSHIG 180

Query: 837  DKRYKNAEPNRMRKISKIYRALASGIINDDKVVIDQPIGIVKYPSVAKGLYVASPSGKPA 658
             KR  N E   + KI+KIYR LASGI+ +D+V I+QPIG+VKYP VAKGLYVAS SGKPA
Sbjct: 181  GKRDTNGE---IGKIAKIYRGLASGIVENDEVTINQPIGVVKYPGVAKGLYVASQSGKPA 237

Query: 657  LSKVAILERNKRSNTTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPNCSGVEL 478
            LS V ILERN + N+TLVQV+IQSGRPHQIRIHLSFIGHPLLGDPLY  GGQP C   + 
Sbjct: 238  LSVVGILERNVQENSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYGDGGQPKCLDCDS 297

Query: 477  IDESFAQDGGYRKPENPVPGDCGYHLHAHQLVLVHPITNELIKIVAPLPSVLRTQEECKG 298
            IDESFA+DGGY++P  PVPGDCGY+LHAH+LVL HP+TNELI+I APLPSVL+T EE K 
Sbjct: 298  IDESFAEDGGYQRPTKPVPGDCGYNLHAHKLVLSHPLTNELIEITAPLPSVLQTPEEAKE 357

Query: 297  I 295
            I
Sbjct: 358  I 358


>emb|CBI31488.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  525 bits (1353), Expect = e-146
 Identities = 254/343 (74%), Positives = 294/343 (85%), Gaps = 2/343 (0%)
 Frame = -1

Query: 1380 ARIFGEPWPDFNDGLTYRDLVSSADAGLSLIEYYSKKHKNSAPFQGWLQRIQNKQIRVDG 1201
            ++ FG PWPDFNDGLTY D+VS++D+ L+LI+YYS KHKNSAP QGWLQRI   QI VDG
Sbjct: 2    SKTFGVPWPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDG 61

Query: 1200 FIVTDRNTILRTGSELVYHRLPWKEPDAPYLLEILYEDDNLIALNKPSGLQVLPGGLFQQ 1021
             +VT+  TILR GS+LVYHRLPW+EPDAPYLLEILYEDD++IALNKPSGLQVLPGGLFQQ
Sbjct: 62   TVVTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQ 121

Query: 1020 RTVLTQLQWCASKEIS--SCEDPNPVPVHRLGRGTSGILLCAKTKFAKSCLAAYFADGTS 847
            RTVLTQLQW A+K+ S  +C++ + VPVHRLGRGTSGILLCAKTK AK+ LAAYFADGTS
Sbjct: 122  RTVLTQLQWRANKQNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTS 181

Query: 846  VVGDKRYKNAEPNRMRKISKIYRALASGIINDDKVVIDQPIGIVKYPSVAKGLYVASPSG 667
            VVG  R  + +   MRKISKIYRAL +GI++ D++VI+QPIG+V+YP VAKGLYVASPSG
Sbjct: 182  VVGGNRDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSG 241

Query: 666  KPALSKVAILERNKRSNTTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPNCSG 487
            KPALSKV+ILER+ + +  +VQVEIQSGRPHQIRIHLSFIGHPLLGDPLYV GGQP C  
Sbjct: 242  KPALSKVSILERDVQGDHMIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCD 301

Query: 486  VELIDESFAQDGGYRKPENPVPGDCGYHLHAHQLVLVHPITNE 358
             E  +ES+A DGGY++P  PVPGDCGYHLHAHQLVL HP TNE
Sbjct: 302  AEFTNESYALDGGYQRPVKPVPGDCGYHLHAHQLVLSHPTTNE 344


>ref|XP_006485879.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X1 [Citrus
            sinensis]
          Length = 390

 Score =  525 bits (1352), Expect = e-146
 Identities = 263/370 (71%), Positives = 300/370 (81%), Gaps = 3/370 (0%)
 Frame = -1

Query: 1374 IFGEPWPDFNDGLTYRDLVSSADAGLSLIEYYSKKHKNSAPFQGWLQRIQNKQIRVDGFI 1195
            +FGEPWP  N+GL Y D+VS +D+ L+LIE+YS KHKNSAP QGWLQRIQN QI VDG +
Sbjct: 12   VFGEPWPQLNEGLLYNDVVSPSDSKLTLIEFYSTKHKNSAPLQGWLQRIQNGQITVDGRV 71

Query: 1194 VTDRNTILRTGSELVYHRLPWKEPDAPYLLEILYEDDNLIALNKPSGLQVLPGGLFQQRT 1015
            V D N IL  GSELVYHRLPWKEPD PYLLE+ YEDD+LIALNKPSGLQVLPGGLFQQRT
Sbjct: 72   VNDPNIILSAGSELVYHRLPWKEPDVPYLLEVFYEDDDLIALNKPSGLQVLPGGLFQQRT 131

Query: 1014 VLTQLQWCASKEIS--SCEDPNPVPVHRLGRGTSGILLCAKTKFAKSCLAAYFADGTSVV 841
            VL QLQW ASK+ S  S +  +PVPVHRLGRGTSGILLCAKTK AK+C+AAYFAD TSVV
Sbjct: 132  VLKQLQWRASKQSSSLSSQASHPVPVHRLGRGTSGILLCAKTKLAKTCIAAYFADKTSVV 191

Query: 840  GDKRYKNAEPNRMRKISKIYRALASGIINDDKVVIDQPIGIVKYPSVAKGLYVASPSGKP 661
                         RKI+KIYRAL  GI+++DKV+I QPIGIV+YP VAKGLYVASPSGKP
Sbjct: 192  DAD--NTVMELSQRKITKIYRALVHGIVDEDKVIIKQPIGIVRYPGVAKGLYVASPSGKP 249

Query: 660  ALSKVAILERNKRSNTTLV-QVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPNCSGV 484
            ALSKV +LER+ + N TLV QVEIQSGRPHQIRIHL+F+GHPLLGDPLYVAGGQP     
Sbjct: 250  ALSKVDVLERDVQRNCTLVQQVEIQSGRPHQIRIHLAFLGHPLLGDPLYVAGGQPKSFDS 309

Query: 483  ELIDESFAQDGGYRKPENPVPGDCGYHLHAHQLVLVHPITNELIKIVAPLPSVLRTQEEC 304
            E  D +FAQDGGY +P NPVPGDCGY+LHA+QL L HP TNE+IKI APLPSVL+T+EE 
Sbjct: 310  EFADGTFAQDGGYERPVNPVPGDCGYYLHAYQLFLSHPTTNEVIKITAPLPSVLKTREEG 369

Query: 303  KGIRQELEME 274
            + + + +  E
Sbjct: 370  REVDKSVGSE 379


>ref|XP_002276664.1| PREDICTED: RNA pseudourine synthase 5-like [Vitis vinifera]
          Length = 348

 Score =  521 bits (1343), Expect = e-145
 Identities = 255/344 (74%), Positives = 294/344 (85%), Gaps = 3/344 (0%)
 Frame = -1

Query: 1380 ARIFGEPWPDFNDGLTYRDLVSSADAGLSLIEYYSKKHKNSAPFQGWLQRIQNKQIRVDG 1201
            ++ FG PWPDFNDGLTY D+VS++D+ L+LI+YYS KHKNSAP QGWLQRI   QI VDG
Sbjct: 2    SKTFGVPWPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDG 61

Query: 1200 FIVTDRNTILRTGSELVYHRLPWKEPDAPYLLEILYEDDNLIALNKPSGLQVLPGGLFQQ 1021
             +VT+  TILR GS+LVYHRLPW+EPDAPYLLEILYEDD++IALNKPSGLQVLPGGLFQQ
Sbjct: 62   TVVTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQ 121

Query: 1020 RTVLTQLQWCASKEIS--SCEDPNPVPVHRLGRGTSGILLCAKTKFAKSCLAAYFADGTS 847
            RTVLTQLQW A+K+ S  +C++ + VPVHRLGRGTSGILLCAKTK AK+ LAAYFADGTS
Sbjct: 122  RTVLTQLQWRANKQNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTS 181

Query: 846  VVGDKRYKNAEPNR-MRKISKIYRALASGIINDDKVVIDQPIGIVKYPSVAKGLYVASPS 670
            VVG  R      +R MRKISKIYRAL +GI++ D++VI+QPIG+V+YP VAKGLYVASPS
Sbjct: 182  VVGGNRLDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPS 241

Query: 669  GKPALSKVAILERNKRSNTTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPNCS 490
            GKPALSKV+ILER+ + +  +VQVEIQSGRPHQIRIHLSFIGHPLLGDPLYV GGQP C 
Sbjct: 242  GKPALSKVSILERDVQGDHMIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCC 301

Query: 489  GVELIDESFAQDGGYRKPENPVPGDCGYHLHAHQLVLVHPITNE 358
              E  +ES+A DGGY++P  PVPGDCGYHLHAHQLVL HP TNE
Sbjct: 302  DAEFTNESYALDGGYQRPVKPVPGDCGYHLHAHQLVLSHPTTNE 345


>ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  520 bits (1338), Expect = e-144
 Identities = 249/364 (68%), Positives = 301/364 (82%), Gaps = 1/364 (0%)
 Frame = -1

Query: 1377 RIFGEPWPDFNDGLTYRDLVSSADAGLSLIEYYSKKHKNSAPFQGWLQRIQNKQIRVDGF 1198
            ++ G PWPD NDGL Y D+V   D+G SLI +YS K+K+SAP +GWLQRI+N+QI +DG 
Sbjct: 8    QVIGIPWPDLNDGLFYNDVVKPPDSGKSLIHFYSWKYKSSAPLEGWLQRIKNEQITIDGE 67

Query: 1197 IVTDRNTILRTGSELVYHRLPWKEPDAPYLLEILYEDDNLIALNKPSGLQVLPGGLFQQR 1018
            ++TD  TILR GS+LVY RLPWKEPD PYLLEILYED+ +IALNKPSGLQVLPGG+FQQR
Sbjct: 68   VITDPETILRIGSDLVYRRLPWKEPDTPYLLEILYEDNEMIALNKPSGLQVLPGGVFQQR 127

Query: 1017 TVLTQLQWCASKE-ISSCEDPNPVPVHRLGRGTSGILLCAKTKFAKSCLAAYFADGTSVV 841
            TVLTQLQW +SK+  S  E+ +PVPVHRLGRGTSGILLCAKTK A++  AAYFA+GTS V
Sbjct: 128  TVLTQLQWWSSKQSFSVSEELHPVPVHRLGRGTSGILLCAKTKLARTQFAAYFAEGTSSV 187

Query: 840  GDKRYKNAEPNRMRKISKIYRALASGIINDDKVVIDQPIGIVKYPSVAKGLYVASPSGKP 661
               R    E    RKISKIYRAL +GII+DD+V +DQPIG ++YP VA+GLYVA+PSGKP
Sbjct: 188  RRNRNSTMEEGTKRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKP 247

Query: 660  ALSKVAILERNKRSNTTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPNCSGVE 481
            A SKV +LER+++S  TLVQVEIQSGRPHQIRIHLS IGHPLLGDPLYVAGGQPNC   E
Sbjct: 248  ACSKVNVLERDEQSKHTLVQVEIQSGRPHQIRIHLSSIGHPLLGDPLYVAGGQPNCLHSE 307

Query: 480  LIDESFAQDGGYRKPENPVPGDCGYHLHAHQLVLVHPITNELIKIVAPLPSVLRTQEECK 301
            ++++SFA+DGGY +P  PVPGDCGY+LHAHQL+L HP TNE++KI+APLP +LRT+ E +
Sbjct: 308  VVNQSFAEDGGYERPTKPVPGDCGYYLHAHQLILYHPKTNEVVKIIAPLPPILRTRIEAE 367

Query: 300  GIRQ 289
             + +
Sbjct: 368  DVHE 371


>ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatula]
            gi|358349060|ref|XP_003638558.1| RNA pseudourine synthase
            [Medicago truncatula] gi|355481000|gb|AES62203.1| RNA
            pseudourine synthase [Medicago truncatula]
            gi|355504493|gb|AES85696.1| RNA pseudourine synthase
            [Medicago truncatula]
          Length = 371

 Score =  520 bits (1338), Expect = e-144
 Identities = 252/357 (70%), Positives = 302/357 (84%), Gaps = 3/357 (0%)
 Frame = -1

Query: 1368 GEPWPDFNDGLTYRDLVSSADAGLSLIEYYSKKHKNSAPFQGWLQRIQNKQIRVDGFIVT 1189
            G PWP+FNDGL+Y D+V  +DAGL+LIE+YS K+K+SAP QGWLQRI++ QI +D  +VT
Sbjct: 8    GIPWPEFNDGLSYDDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQITLDARVVT 67

Query: 1188 DRNTILRTGSELVYHRLPWKEPDAPYLLEILYEDDNLIALNKPSGLQVLPGGLFQQRTVL 1009
            D NTILR GS+LVYHR+PWKEPDAP+ +E+LYEDD++IALNKPSGLQVLPGGLFQQRTVL
Sbjct: 68   DPNTILRVGSKLVYHRIPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGLFQQRTVL 127

Query: 1008 TQLQWCASKE--ISSCEDPNPVPVHRLGRGTSGILLCAKTKFAKSCLAAYFADGTSVVGD 835
            TQLQW  + +  I + + P+PVPVHRLGRGTSGILLCAKTK A++ LA+YFADGTS +  
Sbjct: 128  TQLQWETNNKSTIEAHQKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSRIEG 187

Query: 834  KRYKNAEPNRMRKISKIYRALASGIINDDKVVIDQPIGIVKYPSVAKGLYVASPSGKPAL 655
            K + N E   + KI+KIYRAL SGIIN+D+V I+QPIG+VKYP VAKGLYVAS SGKPAL
Sbjct: 188  KGHTNQE---LGKIAKIYRALVSGIINNDQVTINQPIGMVKYPGVAKGLYVASQSGKPAL 244

Query: 654  SKVAILERNKRSNTTLVQ-VEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPNCSGVEL 478
            S V +LERN + N+TLVQ V+IQSGRPHQIRIHLSFIGHPLLGDPLY  GGQP C   + 
Sbjct: 245  SVVHVLERNVKENSTLVQVVKIQSGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLDCDF 304

Query: 477  IDESFAQDGGYRKPENPVPGDCGYHLHAHQLVLVHPITNELIKIVAPLPSVLRTQEE 307
            +DESFA+DGGY +P  PVPGDCGYHLHAH+L L HPITNE+I+++APLPS+L+T EE
Sbjct: 305  LDESFAEDGGYTRPSKPVPGDCGYHLHAHRLFLSHPITNEIIEMIAPLPSILQTHEE 361


>gb|EXB80105.1| RNA pseudourine synthase 5 [Morus notabilis]
          Length = 377

 Score =  518 bits (1335), Expect = e-144
 Identities = 258/372 (69%), Positives = 302/372 (81%), Gaps = 3/372 (0%)
 Frame = -1

Query: 1407 MSNSG-DSSTARIFGEPWPDFNDGLTYRDLVSSADAGLSLIEYYSKKHKNSAPFQGWLQR 1231
            MSNS  + + A  FG  WP+ NDGL Y D+V ++D+  +LI++YS+K+KNSAP QGWLQR
Sbjct: 1    MSNSSSERAQALRFGFSWPELNDGLFYSDVVRTSDSESTLIQFYSRKYKNSAPLQGWLQR 60

Query: 1230 IQNKQIRVDGFIVTDRNTILRTGSELVYHRLPWKEPDAPYLLEILYEDDNLIALNKPSGL 1051
            I+N QI V+G +V D +TIL  GSELVYHRLPWKEP APY+LEILYED ++IAL+KPS L
Sbjct: 61   IRNGQITVNGRVVRDPDTILSIGSELVYHRLPWKEPGAPYILEILYEDGDMIALDKPSEL 120

Query: 1050 QVLPGGLFQQRTVLTQLQWCASKEISS--CEDPNPVPVHRLGRGTSGILLCAKTKFAKSC 877
            QVLPGGLFQQRTVLTQLQW A+K+ SS  C +PNPVPVHRLGRGTSGILLCAKTKFAK+ 
Sbjct: 121  QVLPGGLFQQRTVLTQLQWRATKQSSSLVCCEPNPVPVHRLGRGTSGILLCAKTKFAKTQ 180

Query: 876  LAAYFADGTSVVGDKRYKNAEPNRMRKISKIYRALASGIINDDKVVIDQPIGIVKYPSVA 697
            LAAYFADGTS VG     N E N  RKI KIYRAL +GI+ +DKV+++QPIG V+YP VA
Sbjct: 181  LAAYFADGTSYVGGNSKNNLELNARRKILKIYRALVTGIVCEDKVIVEQPIGTVQYPGVA 240

Query: 696  KGLYVASPSGKPALSKVAILERNKRSNTTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLY 517
            KGLYVASPSGKPALSKV +LER+   N TLV+VEIQSGRPHQIRIHLSFIGHPLLGDPLY
Sbjct: 241  KGLYVASPSGKPALSKVEVLERDVEKNCTLVKVEIQSGRPHQIRIHLSFIGHPLLGDPLY 300

Query: 516  VAGGQPNCSGVELIDESFAQDGGYRKPENPVPGDCGYHLHAHQLVLVHPITNELIKIVAP 337
            V GG+P C   E +D SFAQDGG+ +P  PVPGDCGY LHAH + L HP TNE+I+I AP
Sbjct: 301  VVGGRPRCFDPEFVDGSFAQDGGFPRPAKPVPGDCGYTLHAHHVSLSHPTTNEVIEITAP 360

Query: 336  LPSVLRTQEECK 301
            LP VL T++E +
Sbjct: 361  LPPVLWTRQEAQ 372


>ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  518 bits (1335), Expect = e-144
 Identities = 248/364 (68%), Positives = 301/364 (82%), Gaps = 1/364 (0%)
 Frame = -1

Query: 1377 RIFGEPWPDFNDGLTYRDLVSSADAGLSLIEYYSKKHKNSAPFQGWLQRIQNKQIRVDGF 1198
            ++ G PWPD NDGL Y D+V   D+G SLI +YS K+K+SAP +GWLQRI+N+QI +DG 
Sbjct: 8    QVIGIPWPDLNDGLFYNDVVKPPDSGKSLIHFYSWKYKSSAPLEGWLQRIKNEQITIDGE 67

Query: 1197 IVTDRNTILRTGSELVYHRLPWKEPDAPYLLEILYEDDNLIALNKPSGLQVLPGGLFQQR 1018
            ++TD  TILR GS+LVY RLPWKEPD PYLLEILYED+ +IALNKPSGLQVLPGG+FQQR
Sbjct: 68   VITDPETILRIGSDLVYRRLPWKEPDTPYLLEILYEDNEMIALNKPSGLQVLPGGVFQQR 127

Query: 1017 TVLTQLQWCASKE-ISSCEDPNPVPVHRLGRGTSGILLCAKTKFAKSCLAAYFADGTSVV 841
            TVLTQLQW +SK+  S  E+ +PVPVHRLGRGTSGILLCAKTK A++  AAYFA+GTS V
Sbjct: 128  TVLTQLQWWSSKQSFSVSEELHPVPVHRLGRGTSGILLCAKTKLARTQFAAYFAEGTSSV 187

Query: 840  GDKRYKNAEPNRMRKISKIYRALASGIINDDKVVIDQPIGIVKYPSVAKGLYVASPSGKP 661
               R    E    RKISKIYRAL +GII+DD+V +DQPIG ++YP VA+GLYVA+PSGKP
Sbjct: 188  RRNRNSTMEEGTKRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKP 247

Query: 660  ALSKVAILERNKRSNTTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPNCSGVE 481
            A SKV +LER+++S  TLVQVEIQSGRPHQIRIHLS IGHPL+GDPLYVAGGQPNC   E
Sbjct: 248  ACSKVNVLERDEQSKHTLVQVEIQSGRPHQIRIHLSSIGHPLVGDPLYVAGGQPNCLHSE 307

Query: 480  LIDESFAQDGGYRKPENPVPGDCGYHLHAHQLVLVHPITNELIKIVAPLPSVLRTQEECK 301
            ++++SFA+DGGY +P  PVPGDCGY+LHAHQL+L HP TNE++KI+APLP +LRT+ E +
Sbjct: 308  VVNQSFAEDGGYERPTKPVPGDCGYYLHAHQLILYHPKTNEVVKIIAPLPPILRTRIEAE 367

Query: 300  GIRQ 289
             + +
Sbjct: 368  DVHE 371


>ref|XP_003556222.1| PREDICTED: RNA pseudouridine synthase 5-like [Glycine max]
          Length = 371

 Score =  517 bits (1332), Expect = e-144
 Identities = 253/362 (69%), Positives = 303/362 (83%), Gaps = 3/362 (0%)
 Frame = -1

Query: 1371 FGEPWPDFNDGLTYRDLVSSADAGLSLIEYYSKKHKNSAPFQGWLQRIQNKQIRVDGFIV 1192
            FG PWP+ NDGL+Y D+V ++DAG +LIE+YS K+K+SAP QGWLQRI++ QI VDG +V
Sbjct: 7    FGIPWPECNDGLSYDDVVRASDAGATLIEFYSTKYKSSAPLQGWLQRIKSGQITVDGGVV 66

Query: 1191 TDRNTILRTGSELVYHRLPWKEPDAPYLLEILYEDDNLIALNKPSGLQVLPGGLFQQRTV 1012
            TD NT+LR GS+L+YHRLPWKEPDAP+++++LYEDD++IALNKPSGLQVLPGGL+QQRT+
Sbjct: 67   TDSNTVLRVGSKLIYHRLPWKEPDAPHMIDVLYEDDDMIALNKPSGLQVLPGGLYQQRTI 126

Query: 1011 LTQLQWCASKEISSCEDP---NPVPVHRLGRGTSGILLCAKTKFAKSCLAAYFADGTSVV 841
            LTQLQW A+ +  +CE     +PVPVHRLGRGTSGILLCAKTK A++ LA++FADGTS V
Sbjct: 127  LTQLQWEANNQ-GTCEMHKRLHPVPVHRLGRGTSGILLCAKTKLARARLASHFADGTSHV 185

Query: 840  GDKRYKNAEPNRMRKISKIYRALASGIINDDKVVIDQPIGIVKYPSVAKGLYVASPSGKP 661
            G KR    E   + KI+K+YRAL SGI+ +DKV I+QPIGIVKYP VAKGLYVAS SGKP
Sbjct: 186  GGKRDTKQE---LGKIAKMYRALVSGIVENDKVTINQPIGIVKYPGVAKGLYVASESGKP 242

Query: 660  ALSKVAILERNKRSNTTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPNCSGVE 481
            ALS V ILE N + N+TLVQV+IQSGRPHQIRIHLSFIGHPLLGDPLY  GGQP C   +
Sbjct: 243  ALSVVDILETNIQENSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYGVGGQPKCLDCD 302

Query: 480  LIDESFAQDGGYRKPENPVPGDCGYHLHAHQLVLVHPITNELIKIVAPLPSVLRTQEECK 301
             +DESFA+DGGY++P  PVPGDCGY+LHAH+LVL HP TNELI+I+APLPS L T EE K
Sbjct: 303  FVDESFAEDGGYQRPTKPVPGDCGYYLHAHKLVLSHPTTNELIEIIAPLPSALHTAEEAK 362

Query: 300  GI 295
             I
Sbjct: 363  EI 364


>ref|XP_006403820.1| hypothetical protein EUTSA_v10010446mg [Eutrema salsugineum]
            gi|557104939|gb|ESQ45273.1| hypothetical protein
            EUTSA_v10010446mg [Eutrema salsugineum]
          Length = 382

 Score =  493 bits (1270), Expect = e-137
 Identities = 242/372 (65%), Positives = 298/372 (80%), Gaps = 6/372 (1%)
 Frame = -1

Query: 1398 SGDSSTARIFGEPWPDFNDGLTYRDLVSSADAGLSLI---EYYSKKHKNSAPFQGWLQRI 1228
            SG   + +  G PWP+ NDGL Y+D+VSS  +   L    ++YS K+K+SAP  GW+QRI
Sbjct: 2    SGKPPSLKRIGLPWPELNDGLAYKDVVSSFSSSSELTTVSDFYSTKYKSSAPLLGWIQRI 61

Query: 1227 QNKQIRVDGFIVTDRNTILRTGSELVYHRLPWKEPDAPYLLEILYEDDNLIALNKPSGLQ 1048
            QN QI++DG +V D NT+LR GS+LVYHRLPWKEPD PY LE+LYED++LIALNKPSGLQ
Sbjct: 62   QNGQIQIDGEVVKDHNTLLRRGSKLVYHRLPWKEPDTPYSLEVLYEDNDLIALNKPSGLQ 121

Query: 1047 VLPGGLFQQRTVLTQLQWCASKEISS--CEDPNPVPVHRLGRGTSGILLCAKTKFAKSCL 874
            VLPGGLFQQRT+LTQLQWC SK+ SS    + +PVPVHRLGRGTSGILLCAKTK AK+ L
Sbjct: 122  VLPGGLFQQRTLLTQLQWCFSKKDSSTGARESHPVPVHRLGRGTSGILLCAKTKLAKTKL 181

Query: 873  AAYFADGTSVVGDKRYKNAEPNRMRKISKIYRALASGIINDDKVVIDQPIGIVKYPSVAK 694
            A+YFA+GTS+VG     + E    RKISKIYRALA GI+ +D+VVI QPIG+V+YP VAK
Sbjct: 182  ASYFAEGTSLVGFGNL-DQECGTGRKISKIYRALADGIVEEDEVVIKQPIGVVRYPGVAK 240

Query: 693  GLYVASPSGKPALSKVAILERNKRSNTTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYV 514
            GLYVAS  GKPALSKVA+LERN + N TLV+VEIQSGRPHQIRIHL+++GHPL+GDPLYV
Sbjct: 241  GLYVASSEGKPALSKVAVLERNMQRNCTLVKVEIQSGRPHQIRIHLAYMGHPLVGDPLYV 300

Query: 513  AGGQPNCSGVELIDESFAQDGGYRKPENPVPGDCGYHLHAHQLVLVHPIT-NELIKIVAP 337
            AGG+P C   + +D +FA+DGGYR+P   VPGDCGYHLHAHQ+ L + +  N+++K+VAP
Sbjct: 301  AGGKPKCFDPDAVDSAFAEDGGYRRPNQAVPGDCGYHLHAHQVELPNLLNLNKVVKVVAP 360

Query: 336  LPSVLRTQEECK 301
            LP +L+T  E +
Sbjct: 361  LPPILQTSSEAE 372


>ref|XP_006346978.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X4 [Solanum
            tuberosum]
          Length = 349

 Score =  490 bits (1261), Expect = e-136
 Identities = 244/358 (68%), Positives = 283/358 (79%), Gaps = 3/358 (0%)
 Frame = -1

Query: 1371 FGEPWPDFNDGLTYRDLVSSADAGLSLIEYYSKKHKNSAPFQGWLQRIQNKQIRVDGFIV 1192
            FG  WP+ N+GLTY D+V   DAGL LIE+Y +K+KNSAP QG                 
Sbjct: 14   FGVSWPELNEGLTYHDIVRPTDAGLMLIEFYFRKYKNSAPLQG----------------- 56

Query: 1191 TDRNTILRTGSELVYHRLPWKEPDAPYLLEILYEDDNLIALNKPSGLQVLPGGLFQQRTV 1012
                     G+ELVYHRLPW+EPDAPYLLE+L++DD LI +NKPSGLQVLPGGL+QQRTV
Sbjct: 57   --------AGAELVYHRLPWREPDAPYLLEVLFQDDYLIVVNKPSGLQVLPGGLYQQRTV 108

Query: 1011 LTQLQWCASKEI---SSCEDPNPVPVHRLGRGTSGILLCAKTKFAKSCLAAYFADGTSVV 841
            LTQLQW A K     S C+  +PVPVHRLGRGTSGILLCAKTK  KS LAAYFA+GTSVV
Sbjct: 109  LTQLQWHACKPTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVV 168

Query: 840  GDKRYKNAEPNRMRKISKIYRALASGIINDDKVVIDQPIGIVKYPSVAKGLYVASPSGKP 661
             DK   N+E N MRKI KIYRAL SG+++ D+VVI QPIG +KYP VAKGLYVASPSGKP
Sbjct: 169  EDK-CTNSECNTMRKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAKGLYVASPSGKP 227

Query: 660  ALSKVAILERNKRSNTTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPNCSGVE 481
            ALS V +LER+  +N TLVQVEIQSGRPHQIRIHLSFIG+PL+GDPLYV+GGQP C   E
Sbjct: 228  ALSSVRVLERDSENNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPE 287

Query: 480  LIDESFAQDGGYRKPENPVPGDCGYHLHAHQLVLVHPITNELIKIVAPLPSVLRTQEE 307
            L+DESF +DGGY++PENPVPGDCGY+LHAHQ+ L+HPITNELIKI APLP++L+T+EE
Sbjct: 288  LMDESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTREE 345


>ref|NP_974416.1| RNA pseudourine synthase 5 [Arabidopsis thaliana]
            gi|229891781|sp|Q5M721.2|PUS5_ARATH RecName: Full=RNA
            pseudouridine synthase 5; AltName: Full=RNA
            pseudouridylate synthase 5; AltName: Full=RNA-uridine
            isomerase 5 gi|332645400|gb|AEE78921.1| RNA pseudourine
            synthase 5 [Arabidopsis thaliana]
          Length = 369

 Score =  489 bits (1260), Expect = e-135
 Identities = 240/361 (66%), Positives = 297/361 (82%), Gaps = 7/361 (1%)
 Frame = -1

Query: 1368 GEPWPDFNDGLTYRDLVSSADAGLSLI-EYYSKKHKNSAPFQGWLQRIQNKQIRVDGFIV 1192
            G PWP+ NDGL Y+D +SS+++ L+ + E+Y  K+K+SAP  GW+QRIQN QI++DG +V
Sbjct: 9    GLPWPELNDGLAYKDAISSSESELTTVSEFYFTKYKSSAPLLGWIQRIQNGQIQIDGEVV 68

Query: 1191 TDRNTILRTGSELVYHRLPWKEPDAPYLLEILYEDDNLIALNKPSGLQVLPGGLFQQRTV 1012
             D NT+LR+GS+LVY RLPWKEPD PY LE+LYEDD+LIALNKPSGLQVLPGGLFQQRTV
Sbjct: 69   KDPNTLLRSGSKLVYSRLPWKEPDTPYSLEVLYEDDDLIALNKPSGLQVLPGGLFQQRTV 128

Query: 1011 LTQLQWCASKE---ISSCEDPNPVPVHRLGRGTSGILLCAKTKFAKSCLAAYFADGTSVV 841
            LTQLQWC  K    I S E P+PVPVHRLGRGTSGILLCAKTK AK+ LAAYFA+GTS+V
Sbjct: 129  LTQLQWCFGKNDSYIGSRESPHPVPVHRLGRGTSGILLCAKTKLAKTKLAAYFAEGTSLV 188

Query: 840  GDKRYKNAEPNRMRKISKIYRALASGIINDDKVVIDQPIGIVKYPSVAKGLYVASPSGKP 661
            G     + E    RK+SKIYRALA GI+ +D+VVI QPIG+V+YP VA+GLYVASP GKP
Sbjct: 189  GSGNL-DQECGTGRKLSKIYRALADGIVEEDEVVIKQPIGVVRYPGVAQGLYVASPEGKP 247

Query: 660  ALSKVAILERNKRSNTTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPNCSGVE 481
            A SKV +LER++  N +LV+VEIQSGRPHQIRIHL+++GHPL+GDPLYVAGGQP C   +
Sbjct: 248  AFSKVFVLERDREKNCSLVKVEIQSGRPHQIRIHLAYMGHPLVGDPLYVAGGQPKCFDPD 307

Query: 480  LIDE--SFAQDGGYRKPENPVPGDCGYHLHAHQLVLVHPI-TNELIKIVAPLPSVLRTQE 310
            L+D+  +FA+DGGYR+P   VPGDCGYHLHAHQ+ L + + T++++KIVAPLP +L+T+ 
Sbjct: 308  LVDDAAAFAEDGGYRRPNQAVPGDCGYHLHAHQVELPNLLNTHKVVKIVAPLPPILQTRC 367

Query: 309  E 307
            E
Sbjct: 368  E 368